Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:13:22 (1322963): wrapper (7.7.26015): starting
11:13:22 (1322963): wrapper: running run_atlas (--nthreads 8)
[2025-04-27 11:13:22] Arguments: --nthreads 8
[2025-04-27 11:13:22] Threads: 8
[2025-04-27 11:13:22] Checking for CVMFS
[2025-04-27 11:13:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-27 11:13:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-27 11:13:22] Running cvmfs_config stat atlas.cern.ch
[2025-04-27 11:13:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-27 11:13:22] 2.11.5.0 243348 3217 72204 145331 0 56 2634579 4097025 0 130560 0 2048104 99.948 769266 27870 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://137.138.123.72:3128 1
[2025-04-27 11:13:22] CVMFS is ok
[2025-04-27 11:13:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-27 11:13:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-27 11:13:22] Further information can be found at the LHC@home message board.
[2025-04-27 11:13:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-27 11:13:22] Checking for apptainer binary...
[2025-04-27 11:13:22] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-04-27 11:13:22] apptainer is not installed, using version from CVMFS
[2025-04-27 11:13:22] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-27 11:13:23] pckelar5.cern.ch
[2025-04-27 11:13:23] apptainer works
[2025-04-27 11:13:23] Set ATHENA_PROC_NUMBER=8
[2025-04-27 11:13:23] Set ATHENA_CORE_NUMBER=8
[2025-04-27 11:13:23] Starting ATLAS job with PandaID=6617461486
[2025-04-27 11:13:23] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-27 13:21:58]  *** The last 200 lines of the pilot log: ***
[2025-04-27 13:21:58] 2025-04-27 11:21:38,569 | INFO     | extracted standard info from prmon json
[2025-04-27 13:21:58] 2025-04-27 11:21:38,569 | INFO     | extracted standard memory fields from prmon json
[2025-04-27 13:21:58] 2025-04-27 11:21:38,569 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-27 13:21:58] 2025-04-27 11:21:38,569 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-27 13:21:58] 2025-04-27 11:21:38,569 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-27 13:21:58] 2025-04-27 11:21:38,572 | INFO     | fitting pss+swap vs Time
[2025-04-27 13:21:58] 2025-04-27 11:21:38,572 | INFO     | sum of square deviations: 620244187.5
[2025-04-27 13:21:58] 2025-04-27 11:21:38,573 | INFO     | sum of deviations: -4619508375.500002
[2025-04-27 13:21:58] 2025-04-27 11:21:38,573 | INFO     | mean x: 1745749049.5
[2025-04-27 13:21:58] 2025-04-27 11:21:38,573 | INFO     | mean y: 2349834.087301587
[2025-04-27 13:21:58] 2025-04-27 11:21:38,573 | INFO     | -- intersect: 13004490794.394836
[2025-04-27 13:21:58] 2025-04-27 11:21:38,573 | INFO     | intersect: 13004490794.394836
[2025-04-27 13:21:58] 2025-04-27 11:21:38,574 | INFO     | chi2: 2.048553477758243
[2025-04-27 13:21:58] 2025-04-27 11:21:38,574 | INFO     | sum of square deviations: 549294020.0
[2025-04-27 13:21:58] 2025-04-27 11:21:38,574 | INFO     | sum of deviations: 3035465408.0000014
[2025-04-27 13:21:58] 2025-04-27 11:21:38,574 | INFO     | mean x: 1745748897.0
[2025-04-27 13:21:58] 2025-04-27 11:21:38,575 | INFO     | mean y: 2365755.5950413225
[2025-04-27 13:21:58] 2025-04-27 11:21:38,575 | INFO     | -- intersect: -9644854485.21089
[2025-04-27 13:21:58] 2025-04-27 11:21:38,575 | INFO     | intersect: -9644854485.21089
[2025-04-27 13:21:58] 2025-04-27 11:21:38,575 | INFO     | chi2: 1.3735150140619152
[2025-04-27 13:21:58] 2025-04-27 11:21:38,575 | INFO     | current chi2=1.3735150140619152 (change=32.95195712610981 %)
[2025-04-27 13:21:58] 2025-04-27 11:21:38,575 | INFO     | sum of square deviations: 483971865.0
[2025-04-27 13:21:58] 2025-04-27 11:21:38,576 | INFO     | sum of deviations: 3942416732.5000005
[2025-04-27 13:21:58] 2025-04-27 11:21:38,576 | INFO     | mean x: 1745748744.5
[2025-04-27 13:21:58] 2025-04-27 11:21:38,576 | INFO     | mean y: 2367839.043103448
[2025-04-27 13:21:58] 2025-04-27 11:21:38,576 | INFO     | -- intersect: -14218436217.526731
[2025-04-27 13:21:58] 2025-04-27 11:21:38,576 | INFO     | intersect: -14218436217.526731
[2025-04-27 13:21:58] 2025-04-27 11:21:38,577 | INFO     | chi2: 1.3705474221923641
[2025-04-27 13:21:58] 2025-04-27 11:21:38,577 | INFO     | current chi2=1.3705474221923641 (change=0.2160582038906869 %)
[2025-04-27 13:21:58] 2025-04-27 11:21:38,577 | INFO     | right removable region: 115
[2025-04-27 13:21:58] 2025-04-27 11:21:38,577 | INFO     | sum of square deviations: 549294020.0
[2025-04-27 13:21:58] 2025-04-27 11:21:38,578 | INFO     | sum of deviations: -18091580019.0
[2025-04-27 13:21:58] 2025-04-27 11:21:38,578 | INFO     | mean x: 1745749202.0
[2025-04-27 13:21:58] 2025-04-27 11:21:38,578 | INFO     | mean y: 2378065.8429752067
[2025-04-27 13:21:58] 2025-04-27 11:21:38,578 | INFO     | -- intersect: 57500476044.569176
[2025-04-27 13:21:58] 2025-04-27 11:21:38,578 | INFO     | intersect: 57500476044.569176
[2025-04-27 13:21:58] 2025-04-27 11:21:38,578 | INFO     | chi2: 0.8401290880056416
[2025-04-27 13:21:58] 2025-04-27 11:21:38,579 | INFO     | current chi2=0.8401290880056416 (change=58.98915517084743 %)
[2025-04-27 13:21:58] 2025-04-27 11:21:38,579 | INFO     | sum of square deviations: 483971865.0
[2025-04-27 13:21:58] 2025-04-27 11:21:38,579 | INFO     | sum of deviations: -20493135805.999996
[2025-04-27 13:21:58] 2025-04-27 11:21:38,579 | INFO     | mean x: 1745749354.5
[2025-04-27 13:21:58] 2025-04-27 11:21:38,580 | INFO     | mean y: 2383483.9655172415
[2025-04-27 13:21:58] 2025-04-27 11:21:38,580 | INFO     | -- intersect: 73923785103.05618
[2025-04-27 13:21:58] 2025-04-27 11:21:38,580 | INFO     | intersect: 73923785103.05618
[2025-04-27 13:21:58] 2025-04-27 11:21:38,580 | INFO     | chi2: 0.760765994000152
[2025-04-27 13:21:58] 2025-04-27 11:21:38,580 | INFO     | current chi2=0.760765994000152 (change=9.44653567392689 %)
[2025-04-27 13:21:58] 2025-04-27 11:21:38,580 | INFO     | left removable region: 20
[2025-04-27 13:21:58] 2025-04-27 11:21:38,581 | INFO     | sum of square deviations: 265828240.0
[2025-04-27 13:21:58] 2025-04-27 11:21:38,581 | INFO     | sum of deviations: -8767250559.000002
[2025-04-27 13:21:58] 2025-04-27 11:21:38,581 | INFO     | mean x: 1745749324.0
[2025-04-27 13:21:58] 2025-04-27 11:21:38,581 | INFO     | mean y: 2399343.8
[2025-04-27 13:21:58] 2025-04-27 11:21:38,581 | INFO     | -- intersect: 57578756681.579
[2025-04-27 13:21:58] 2025-04-27 11:21:38,582 | INFO     | intersect: 57578756681.579
[2025-04-27 13:21:58] 2025-04-27 11:21:38,582 | INFO     | chi2: 0.05360610758494233
[2025-04-27 13:21:58] 2025-04-27 11:21:38,582 | INFO     | -- intersect: 57578756681.579
[2025-04-27 13:21:58] 2025-04-27 11:21:38,582 | INFO     | current memory leak: -32.98 B/s (using 95 data points, chi2=0.05)
[2025-04-27 13:21:58] 2025-04-27 11:21:38,582 | INFO     | ..............................
[2025-04-27 13:21:58] 2025-04-27 11:21:38,583 | INFO     | . Timing measurements:
[2025-04-27 13:21:58] 2025-04-27 11:21:38,583 | INFO     | . get job = 0 s
[2025-04-27 13:21:58] 2025-04-27 11:21:38,583 | INFO     | . initial setup = 1 s
[2025-04-27 13:21:58] 2025-04-27 11:21:38,583 | INFO     | . payload setup = 7 s
[2025-04-27 13:21:58] 2025-04-27 11:21:38,583 | INFO     | . stage-in = 0 s
[2025-04-27 13:21:58] 2025-04-27 11:21:38,583 | INFO     | . payload execution = 7649 s
[2025-04-27 13:21:58] 2025-04-27 11:21:38,583 | INFO     | . stage-out = 0 s
[2025-04-27 13:21:58] 2025-04-27 11:21:38,583 | INFO     | . log creation = 0 s
[2025-04-27 13:21:58] 2025-04-27 11:21:38,583 | INFO     | ..............................
[2025-04-27 13:21:58] 2025-04-27 11:21:38,669 | INFO     | 
[2025-04-27 13:21:58] 2025-04-27 11:21:38,669 | INFO     | job summary report
[2025-04-27 13:21:58] 2025-04-27 11:21:38,670 | INFO     | --------------------------------------------------
[2025-04-27 13:21:58] 2025-04-27 11:21:38,670 | INFO     | PanDA job id: 6617461486
[2025-04-27 13:21:58] 2025-04-27 11:21:38,670 | INFO     | task id: 44292257
[2025-04-27 13:21:58] 2025-04-27 11:21:38,670 | INFO     | errors: (none)
[2025-04-27 13:21:58] 2025-04-27 11:21:38,670 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-27 13:21:58] 2025-04-27 11:21:38,670 | INFO     | pilot state: finished 
[2025-04-27 13:21:58] 2025-04-27 11:21:38,670 | INFO     | transexitcode: 0
[2025-04-27 13:21:58] 2025-04-27 11:21:38,670 | INFO     | exeerrorcode: 0
[2025-04-27 13:21:58] 2025-04-27 11:21:38,670 | INFO     | exeerrordiag: 
[2025-04-27 13:21:58] 2025-04-27 11:21:38,670 | INFO     | exitcode: 0
[2025-04-27 13:21:58] 2025-04-27 11:21:38,671 | INFO     | exitmsg: OK
[2025-04-27 13:21:58] 2025-04-27 11:21:38,671 | INFO     | cpuconsumptiontime: 56555 s
[2025-04-27 13:21:58] 2025-04-27 11:21:38,671 | INFO     | nevents: 400
[2025-04-27 13:21:58] 2025-04-27 11:21:38,671 | INFO     | neventsw: 0
[2025-04-27 13:21:58] 2025-04-27 11:21:38,671 | INFO     | pid: 1333824
[2025-04-27 13:21:58] 2025-04-27 11:21:38,671 | INFO     | pgrp: 1333824
[2025-04-27 13:21:58] 2025-04-27 11:21:38,671 | INFO     | corecount: 8
[2025-04-27 13:21:58] 2025-04-27 11:21:38,671 | INFO     | event service: False
[2025-04-27 13:21:58] 2025-04-27 11:21:38,671 | INFO     | sizes: {0: 2392895, 1: 2393751, 5: 2393957, 12: 2394013, 7660: 2421373, 7662: 2430314, 7666: 2430526, 7672: 2430696}
[2025-04-27 13:21:58] 2025-04-27 11:21:38,672 | INFO     | --------------------------------------------------
[2025-04-27 13:21:58] 2025-04-27 11:21:38,672 | INFO     | 
[2025-04-27 13:21:58] 2025-04-27 11:21:38,672 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-04-27 13:21:58] 2025-04-27 11:21:38,691 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-27 13:21:58] 2025-04-27 11:21:38,692 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-27 13:21:58] 2025-04-27 11:21:38,692 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-27 13:21:58] 2025-04-27 11:21:38,692 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-27 13:21:58] 2025-04-27 11:21:38,692 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-27 13:21:58] 2025-04-27 11:21:38,692 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-27 13:21:58] 2025-04-27 11:21:38,692 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-27 13:21:58] 2025-04-27 11:21:38,692 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-27 13:21:58] 2025-04-27 11:21:38,692 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-27 13:21:58] 2025-04-27 11:21:38,692 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-27 13:21:58] 2025-04-27 11:21:38,693 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-27 13:21:58] 2025-04-27 11:21:38,693 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-27 13:21:58] 2025-04-27 11:21:38,693 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-27 13:21:58] 2025-04-27 11:21:38,693 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-27 13:21:58] 2025-04-27 11:21:38,693 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-27 13:21:58] 2025-04-27 11:21:38,693 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-27 13:21:58] 2025-04-27 11:21:38,693 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-27 13:21:58] 2025-04-27 11:21:38,693 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-27 13:21:58] 2025-04-27 11:21:38,693 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-27 13:21:58] 2025-04-27 11:21:38,694 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-27 13:21:58] 2025-04-27 11:21:38,694 | INFO     | job 6617461486 has completed (purged errors)
[2025-04-27 13:21:58] 2025-04-27 11:21:38,694 | INFO     | overall cleanup function is called
[2025-04-27 13:21:58] 2025-04-27 11:21:39,701 | INFO     | --- collectZombieJob: --- 10, [1333824]
[2025-04-27 13:21:58] 2025-04-27 11:21:39,701 | INFO     | zombie collector waiting for pid 1333824
[2025-04-27 13:21:58] 2025-04-27 11:21:39,701 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-27 13:21:58] 2025-04-27 11:21:39,701 | INFO     | collected zombie processes
[2025-04-27 13:21:58] 2025-04-27 11:21:39,701 | INFO     | will attempt to kill all subprocesses of pid=1333824
[2025-04-27 13:21:58] 2025-04-27 11:21:39,791 | INFO     | process IDs to be killed: [1333824] (in reverse order)
[2025-04-27 13:21:58] 2025-04-27 11:21:39,830 | WARNING  | found no corresponding commands to process id(s)
[2025-04-27 13:21:58] 2025-04-27 11:21:39,830 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-27 13:21:58] 2025-04-27 11:21:39,832 | INFO     | did not find any defunct processes belonging to 1333824
[2025-04-27 13:21:58] 2025-04-27 11:21:39,835 | INFO     | did not find any defunct processes belonging to 1333824
[2025-04-27 13:21:58] 2025-04-27 11:21:39,835 | INFO     | ready for new job
[2025-04-27 13:21:58] 2025-04-27 11:21:39,835 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-27 13:21:58] 2025-04-27 11:21:39,836 | INFO     | **************************************
[2025-04-27 13:21:58] 2025-04-27 11:21:39,836 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-27 13:21:58] 2025-04-27 11:21:39,837 | INFO     | **************************************
[2025-04-27 13:21:58] 2025-04-27 11:21:39,837 | INFO     | 
[2025-04-27 13:21:58] 2025-04-27 11:21:39,850 | INFO     | architecture information:
[2025-04-27 13:21:58] 2025-04-27 11:21:39,850 | INFO     | executing command: cat /etc/os-release
[2025-04-27 13:21:58] 2025-04-27 11:21:39,862 | INFO     | cat /etc/os-release:
[2025-04-27 13:21:58] NAME="CentOS Linux"
[2025-04-27 13:21:58] VERSION="7 (Core)"
[2025-04-27 13:21:58] ID="centos"
[2025-04-27 13:21:58] ID_LIKE="rhel fedora"
[2025-04-27 13:21:58] VERSION_ID="7"
[2025-04-27 13:21:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-27 13:21:58] ANSI_COLOR="0;31"
[2025-04-27 13:21:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-27 13:21:58] HOME_URL="https://www.centos.org/"
[2025-04-27 13:21:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-27 13:21:58] 
[2025-04-27 13:21:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-27 13:21:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-27 13:21:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-27 13:21:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-27 13:21:58] 
[2025-04-27 13:21:58] 2025-04-27 11:21:39,862 | INFO     | **************************************
[2025-04-27 13:21:58] 2025-04-27 11:21:40,365 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-04-27 13:21:58] 2025-04-27 11:21:40,379 | INFO     | sufficient remaining disk space (1818884046848 B)
[2025-04-27 13:21:58] 2025-04-27 11:21:40,379 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-27 13:21:58] 2025-04-27 11:21:40,380 | INFO     | current server update state: UPDATING_FINAL
[2025-04-27 13:21:58] 2025-04-27 11:21:40,380 | INFO     | update_server=False
[2025-04-27 13:21:58] 2025-04-27 11:21:40,380 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-27 13:21:58] 2025-04-27 11:21:40,380 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-27 13:21:58] 2025-04-27 11:21:40,380 | INFO     | found 0 job(s) in 20 queues
[2025-04-27 13:21:58] 2025-04-27 11:21:40,381 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-27 13:21:58] 2025-04-27 11:21:40,381 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-27 13:21:58] 2025-04-27 11:21:40,381 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-27 13:21:58] 2025-04-27 11:21:40,690 | INFO     | all data control threads have been joined
[2025-04-27 13:21:58] 2025-04-27 11:21:40,834 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-27 13:21:58] 2025-04-27 11:21:40,834 | INFO     | aborting loop
[2025-04-27 13:21:58] 2025-04-27 11:21:41,385 | INFO     | [job] queue monitor thread has finished
[2025-04-27 13:21:58] 2025-04-27 11:21:41,385 | INFO     | [job] retrieve thread has finished
[2025-04-27 13:21:58] 2025-04-27 11:21:41,436 | INFO     | all payload control threads have been joined
[2025-04-27 13:21:58] 2025-04-27 11:21:41,442 | INFO     | [payload] validate_pre thread has finished
[2025-04-27 13:21:58] 2025-04-27 11:21:41,518 | INFO     | [job] create_data_payload thread has finished
[2025-04-27 13:21:58] 2025-04-27 11:21:41,605 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-27 13:21:58] 2025-04-27 11:21:41,695 | INFO     | [data] control thread has finished
[2025-04-27 13:21:58] 2025-04-27 11:21:41,755 | INFO     | all job control threads have been joined
[2025-04-27 13:21:58] 2025-04-27 11:21:41,839 | INFO     | [job] job monitor thread has finished
[2025-04-27 13:21:58] 2025-04-27 11:21:42,107 | INFO     | [payload] validate_post thread has finished
[2025-04-27 13:21:58] 2025-04-27 11:21:42,265 | INFO     | [data] copytool_in thread has finished
[2025-04-27 13:21:58] 2025-04-27 11:21:42,339 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-27 13:21:58] 2025-04-27 11:21:42,441 | INFO     | [payload] control thread has finished
[2025-04-27 13:21:58] 2025-04-27 11:21:42,584 | INFO     | [payload] execute_payloads thread has finished
[2025-04-27 13:21:58] 2025-04-27 11:21:42,758 | INFO     | [job] validate thread has finished
[2025-04-27 13:21:58] 2025-04-27 11:21:42,760 | INFO     | [job] control thread has finished
[2025-04-27 13:21:58] 2025-04-27 11:21:42,980 | INFO     | [payload] failed_post thread has finished
[2025-04-27 13:21:58] 2025-04-27 11:21:43,611 | INFO     | [data] copytool_out thread has finished
[2025-04-27 13:21:58] 2025-04-27 11:21:46,345 | INFO     | [data] queue_monitor thread has finished
[2025-04-27 13:21:58] 2025-04-27 11:21:51,089 | INFO     | job.realtimelogging is not enabled
[2025-04-27 13:21:58] 2025-04-27 11:21:52,094 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-27 13:21:58] 2025-04-27 11:21:52,825 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139649127155520)>', '<ExcThread(monitor, started 139648286312192)>']
[2025-04-27 13:21:58] 2025-04-27 11:21:53,443 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-27 13:21:58] 2025-04-27 11:21:53,443 | INFO     | [monitor] control thread has ended
[2025-04-27 13:21:58] 2025-04-27 11:21:57,850 | INFO     | all workflow threads have been joined
[2025-04-27 13:21:58] 2025-04-27 11:21:57,850 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-27 13:21:58] 2025-04-27 11:21:57,851 | INFO     | traces error code: 0
[2025-04-27 13:21:58] 2025-04-27 11:21:57,851 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-27 13:21:58] 2025-04-27 11:21:57,937 [wrapper] ==== pilot stdout END ====
[2025-04-27 13:21:58] 2025-04-27 11:21:57,940 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-27 13:21:58] 2025-04-27 11:21:57,943 [wrapper] pilotpid: 1326645
[2025-04-27 13:21:58] 2025-04-27 11:21:57,945 [wrapper] Pilot exit status: 0
[2025-04-27 13:21:58] 2025-04-27 11:21:57,956 [wrapper] pandaids: 6617461486
[2025-04-27 13:21:58] 2025-04-27 11:21:57,981 [wrapper] cleanup supervisor_pilot 1360670 1326646
[2025-04-27 13:21:58] 2025-04-27 11:21:57,983 [wrapper] Test setup, not cleaning
[2025-04-27 13:21:58] 2025-04-27 11:21:57,985 [wrapper] apfmon messages muted
[2025-04-27 13:21:58] 2025-04-27 11:21:57,988 [wrapper] ==== wrapper stdout END ====
[2025-04-27 13:21:58] 2025-04-27 11:21:57,991 [wrapper] ==== wrapper stderr END ====
[2025-04-27 13:21:58]  *** Error codes and diagnostics ***
[2025-04-27 13:21:58]     "exeErrorCode": 0,
[2025-04-27 13:21:58]     "exeErrorDiag": "",
[2025-04-27 13:21:58]     "pilotErrorCode": 0,
[2025-04-27 13:21:58]     "pilotErrorDiag": "",
[2025-04-27 13:21:58]  *** Listing of results directory ***
[2025-04-27 13:21:58] total 232092
[2025-04-27 13:21:58] -rw-r--r-- 1 boinc boinc    503527 Apr  3 09:42 pilot3.tar.gz
[2025-04-27 13:21:58] -rwx------ 1 boinc boinc     37140 Apr 26 16:55 runpilot2-wrapper.sh
[2025-04-27 13:21:58] -rw-r--r-- 1 boinc boinc      5111 Apr 26 16:55 queuedata.json
[2025-04-27 13:21:58] -rw-r--r-- 1 boinc boinc       100 Apr 27 11:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-27 13:21:58] -rwxr-xr-x 1 boinc boinc      7986 Apr 27 11:13 run_atlas
[2025-04-27 13:21:58] -rw-r--r-- 1 boinc boinc       105 Apr 27 11:13 job.xml
[2025-04-27 13:21:58] -rw-r--r-- 2 boinc boinc  29059150 Apr 27 11:13 EVNT.44292255._000477.pool.root.1
[2025-04-27 13:21:58] -rw-r--r-- 2 boinc boinc     17569 Apr 27 11:13 start_atlas.sh
[2025-04-27 13:21:58] drwxrwx--x 2 boinc boinc        68 Apr 27 11:13 shared
[2025-04-27 13:21:58] -rw-r--r-- 2 boinc boinc    517088 Apr 27 11:13 input.tar.gz
[2025-04-27 13:21:58] -rw-r--r-- 1 boinc boinc      6175 Apr 27 11:13 init_data.xml
[2025-04-27 13:21:58] -rw-r--r-- 1 boinc boinc         0 Apr 27 11:13 boinc_lockfile
[2025-04-27 13:21:58] -rw-r--r-- 1 boinc boinc      2546 Apr 27 11:13 pandaJob.out
[2025-04-27 13:21:58] -rw------- 1 boinc boinc       124 Apr 27 11:13 setup.sh.local
[2025-04-27 13:21:58] -rw------- 1 boinc boinc    992818 Apr 27 11:13 agis_schedconf.cvmfs.json
[2025-04-27 13:21:58] -rw------- 1 boinc boinc   1596659 Apr 27 11:13 agis_ddmendpoints.agis.ALL.json
[2025-04-27 13:21:58] drwx------ 4 boinc boinc      4096 Apr 27 11:13 pilot3
[2025-04-27 13:21:58] -rw-r--r-- 1 boinc boinc       529 Apr 27 13:20 boinc_task_state.xml
[2025-04-27 13:21:58] -rw------- 1 boinc boinc 202708759 Apr 27 13:20 HITS.44292257._009902.pool.root.1
[2025-04-27 13:21:58] -rw------- 1 boinc boinc        95 Apr 27 13:21 pilot_heartbeat.json
[2025-04-27 13:21:58] -rw------- 1 boinc boinc      1023 Apr 27 13:21 memory_monitor_summary.json
[2025-04-27 13:21:58] -rw------- 1 boinc boinc    318841 Apr 27 13:21 log.44292257._009902.job.log.tgz.1
[2025-04-27 13:21:58] -rw------- 1 boinc boinc      7702 Apr 27 13:21 heartbeat.json
[2025-04-27 13:21:58] -rw-r--r-- 1 boinc boinc        27 Apr 27 13:21 wrapper_checkpoint.txt
[2025-04-27 13:21:58] -rw-r--r-- 1 boinc boinc      8192 Apr 27 13:21 boinc_mmap_file
[2025-04-27 13:21:58] -rw------- 1 boinc boinc      4550 Apr 27 13:21 pilotlog.txt
[2025-04-27 13:21:58] -rw------- 1 boinc boinc    709926 Apr 27 13:21 log.44292257._009902.job.log.1
[2025-04-27 13:21:58] -rw------- 1 boinc boinc       357 Apr 27 13:21 output.list
[2025-04-27 13:21:58] -rw-r--r-- 1 boinc boinc       620 Apr 27 13:21 runtime_log
[2025-04-27 13:21:58] -rw------- 1 boinc boinc   1044480 Apr 27 13:21 result.tar.gz
[2025-04-27 13:21:58] -rw-r--r-- 1 boinc boinc      9835 Apr 27 13:21 runtime_log.err
[2025-04-27 13:21:58] -rw------- 1 boinc boinc       657 Apr 27 13:21 4L8KDm06vS7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmpoALDmvyNggm.diag
[2025-04-27 13:21:58] -rw-r--r-- 1 boinc boinc     20871 Apr 27 13:21 stderr.txt
[2025-04-27 13:21:58] HITS file was successfully produced:
[2025-04-27 13:21:58] -rw------- 1 boinc boinc 202708759 Apr 27 13:20 shared/HITS.pool.root.1
[2025-04-27 13:21:58]  *** Contents of shared directory: ***
[2025-04-27 13:21:58] total 227888
[2025-04-27 13:21:58] -rw-r--r-- 2 boinc boinc  29059150 Apr 27 11:13 ATLAS.root_0
[2025-04-27 13:21:58] -rw-r--r-- 2 boinc boinc     17569 Apr 27 11:13 start_atlas.sh
[2025-04-27 13:21:58] -rw-r--r-- 2 boinc boinc    517088 Apr 27 11:13 input.tar.gz
[2025-04-27 13:21:58] -rw------- 1 boinc boinc 202708759 Apr 27 13:20 HITS.pool.root.1
[2025-04-27 13:21:58] -rw------- 1 boinc boinc   1044480 Apr 27 13:21 result.tar.gz
13:21:59 (1322963): run_atlas exited; CPU time 56599.383479
13:21:59 (1322963): called boinc_finish(0)

</stderr_txt>
]]>

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