Stderr output

<core_client_version>8.2.1</core_client_version>
<![CDATA[
<stderr_txt>
04:21:29 (138471): wrapper (7.7.26015): starting
04:21:29 (138471): wrapper: running run_atlas (--nthreads 4)
[2025-04-28 04:21:29] Arguments: --nthreads 4
[2025-04-28 04:21:29] Threads: 4
[2025-04-28 04:21:29] Checking for CVMFS
[2025-04-28 04:21:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-28 04:21:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-28 04:21:29] Running cvmfs_config stat atlas.cern.ch
[2025-04-28 04:21:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-28 04:21:29] 2.12.7.0 15874 80 44916 145356 3 56 21996371 33554432 1313 130560 0 202133 99.991 72733 18329 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.0.1:25468 1
[2025-04-28 04:21:29] CVMFS is ok
[2025-04-28 04:21:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-28 04:21:29] Checking for apptainer binary...
[2025-04-28 04:21:29] apptainer is not installed, using version from CVMFS
[2025-04-28 04:21:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-28 04:21:30] Evangelos-Katikos
[2025-04-28 04:21:30] apptainer works
[2025-04-28 04:21:30] Set ATHENA_PROC_NUMBER=4
[2025-04-28 04:21:30] Set ATHENA_CORE_NUMBER=4
[2025-04-28 04:21:30] Starting ATLAS job with PandaID=6617462023
[2025-04-28 04:21:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/home/ek/BOINC/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-28 05:32:59]  *** The last 200 lines of the pilot log: ***
[2025-04-28 05:32:59]  guid=dcdf2fdc-734b-43dc-9aef-396e2d0f9c63
[2025-04-28 05:32:59]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-28 05:32:59]  is_altstaged=None
[2025-04-28 05:32:59]  is_tar=False
[2025-04-28 05:32:59]  lfn=log.44292257._010053.job.log.tgz.1
[2025-04-28 05:32:59]  mtime=0
[2025-04-28 05:32:59]  protocol_id=None
[2025-04-28 05:32:59]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-28 05:32:59]  replicas=None
[2025-04-28 05:32:59]  scope=mc23_13p6TeV
[2025-04-28 05:32:59]  status=None
[2025-04-28 05:32:59]  status_code=0
[2025-04-28 05:32:59]  storage_token=
[2025-04-28 05:32:59]  surl=/home/ek/BOINC/slots/2/PanDA_Pilot-6617462023/log.44292257._010053.job.log.tgz.1
[2025-04-28 05:32:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8a/d6/log.44292257._010053.job.log.tgz.1
[2025-04-28 05:32:59]  workdir=None
[2025-04-28 05:32:59] ]
[2025-04-28 05:32:59] 2025-04-28 02:32:32,646 | INFO     | transferring file log.44292257._010053.job.log.tgz.1 from /home/ek/BOINC/slots/2/PanDA_Pilot-6617462023/log.44292257._010053.job.log.tgz.1 to /home/ek/BOINC/slots/
[2025-04-28 05:32:59] 2025-04-28 02:32:32,646 | INFO     | executing command: /usr/bin/env mv /home/ek/BOINC/slots/2/PanDA_Pilot-6617462023/log.44292257._010053.job.log.tgz.1 /home/ek/BOINC/slots/2/log.44292257._010053.job
[2025-04-28 05:32:59] 2025-04-28 02:32:32,661 | INFO     | adding to output.list: log.44292257._010053.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8a/d6/log.44292257._010053.job.log.tg
[2025-04-28 05:32:59] 2025-04-28 02:32:32,662 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-28 05:32:59] 2025-04-28 02:32:32,662 | INFO     | summary of transferred files:
[2025-04-28 05:32:59] 2025-04-28 02:32:32,662 | INFO     |  -- lfn=log.44292257._010053.job.log.tgz.1, status_code=0, status=transferred
[2025-04-28 05:32:59] 2025-04-28 02:32:32,662 | INFO     | stage-out finished correctly
[2025-04-28 05:32:59] 2025-04-28 02:32:33,764 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-28 05:32:59] 2025-04-28 02:32:34,497 | INFO     | monitor loop #325: job 0:6617462023 is in state 'finished'
[2025-04-28 05:32:59] 2025-04-28 02:32:34,498 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-28 05:32:59] 2025-04-28 02:32:36,462 | INFO     | job 6617462023 has state=finished
[2025-04-28 05:32:59] 2025-04-28 02:32:36,463 | INFO     | preparing for final server update for job 6617462023 in state='finished'
[2025-04-28 05:32:59] 2025-04-28 02:32:36,463 | INFO     | this job has now completed (state=finished)
[2025-04-28 05:32:59] 2025-04-28 02:32:36,463 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-28 05:32:59] 2025-04-28 02:32:36,463 | INFO     | log transfer has been attempted: DONE
[2025-04-28 05:32:59] 2025-04-28 02:32:36,463 | INFO     | job 6617462023 has finished - writing final server update
[2025-04-28 05:32:59] 2025-04-28 02:32:36,463 | INFO     | total number of processed events: 400 (read)
[2025-04-28 05:32:59] 2025-04-28 02:32:36,465 | INFO     | executing command: lscpu
[2025-04-28 05:32:59] 2025-04-28 02:32:36,485 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-28 05:32:59] 2025-04-28 02:32:37,000 | INFO     | monitor loop #326: job 0:6617462023 is in state 'finished'
[2025-04-28 05:32:59] 2025-04-28 02:32:37,001 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-28 05:32:59] 2025-04-28 02:32:38,973 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-28 05:32:59] 2025-04-28 02:32:38,974 | INFO     | using path: /home/ek/BOINC/slots/2/PanDA_Pilot-6617462023/memory_monitor_summary.json (trf name=prmon)
[2025-04-28 05:32:59] 2025-04-28 02:32:38,974 | INFO     | extracted standard info from prmon json
[2025-04-28 05:32:59] 2025-04-28 02:32:38,974 | INFO     | extracted standard memory fields from prmon json
[2025-04-28 05:32:59] 2025-04-28 02:32:38,974 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-28 05:32:59] 2025-04-28 02:32:38,974 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-28 05:32:59] 2025-04-28 02:32:38,974 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-28 05:32:59] 2025-04-28 02:32:38,975 | INFO     | fitting pss+swap vs Time
[2025-04-28 05:32:59] 2025-04-28 02:32:38,975 | INFO     | sum of square deviations: 77515872.0
[2025-04-28 05:32:59] 2025-04-28 02:32:38,975 | INFO     | sum of deviations: -2578793361.0000005
[2025-04-28 05:32:59] 2025-04-28 02:32:38,975 | INFO     | mean x: 1745805512.0
[2025-04-28 05:32:59] 2025-04-28 02:32:38,975 | INFO     | mean y: 2423042.285714286
[2025-04-28 05:32:59] 2025-04-28 02:32:38,975 | INFO     | -- intersect: 58081775667.54943
[2025-04-28 05:32:59] 2025-04-28 02:32:38,975 | INFO     | intersect: 58081775667.54943
[2025-04-28 05:32:59] 2025-04-28 02:32:38,975 | INFO     | chi2: 0.025203260183772305
[2025-04-28 05:32:59] 2025-04-28 02:32:38,975 | INFO     | -- intersect: 58081775667.54943
[2025-04-28 05:32:59] 2025-04-28 02:32:38,975 | INFO     | current memory leak: -33.27 B/s (using 63 data points, chi2=0.03)
[2025-04-28 05:32:59] 2025-04-28 02:32:38,976 | INFO     | ..............................
[2025-04-28 05:32:59] 2025-04-28 02:32:38,976 | INFO     | . Timing measurements:
[2025-04-28 05:32:59] 2025-04-28 02:32:38,976 | INFO     | . get job = 0 s
[2025-04-28 05:32:59] 2025-04-28 02:32:38,976 | INFO     | . initial setup = 1 s
[2025-04-28 05:32:59] 2025-04-28 02:32:38,976 | INFO     | . payload setup = 3 s
[2025-04-28 05:32:59] 2025-04-28 02:32:38,976 | INFO     | . stage-in = 0 s
[2025-04-28 05:32:59] 2025-04-28 02:32:38,976 | INFO     | . payload execution = 4234 s
[2025-04-28 05:32:59] 2025-04-28 02:32:38,976 | INFO     | . stage-out = 0 s
[2025-04-28 05:32:59] 2025-04-28 02:32:38,976 | INFO     | . log creation = 0 s
[2025-04-28 05:32:59] 2025-04-28 02:32:38,976 | INFO     | ..............................
[2025-04-28 05:32:59] 2025-04-28 02:32:39,235 | INFO     | 
[2025-04-28 05:32:59] 2025-04-28 02:32:39,235 | INFO     | job summary report
[2025-04-28 05:32:59] 2025-04-28 02:32:39,235 | INFO     | --------------------------------------------------
[2025-04-28 05:32:59] 2025-04-28 02:32:39,235 | INFO     | PanDA job id: 6617462023
[2025-04-28 05:32:59] 2025-04-28 02:32:39,235 | INFO     | task id: 44292257
[2025-04-28 05:32:59] 2025-04-28 02:32:39,235 | INFO     | errors: (none)
[2025-04-28 05:32:59] 2025-04-28 02:32:39,235 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-28 05:32:59] 2025-04-28 02:32:39,235 | INFO     | pilot state: finished 
[2025-04-28 05:32:59] 2025-04-28 02:32:39,235 | INFO     | transexitcode: 0
[2025-04-28 05:32:59] 2025-04-28 02:32:39,235 | INFO     | exeerrorcode: 0
[2025-04-28 05:32:59] 2025-04-28 02:32:39,235 | INFO     | exeerrordiag: 
[2025-04-28 05:32:59] 2025-04-28 02:32:39,235 | INFO     | exitcode: 0
[2025-04-28 05:32:59] 2025-04-28 02:32:39,235 | INFO     | exitmsg: OK
[2025-04-28 05:32:59] 2025-04-28 02:32:39,236 | INFO     | cpuconsumptiontime: 15340 s
[2025-04-28 05:32:59] 2025-04-28 02:32:39,236 | INFO     | nevents: 400
[2025-04-28 05:32:59] 2025-04-28 02:32:39,236 | INFO     | neventsw: 0
[2025-04-28 05:32:59] 2025-04-28 02:32:39,236 | INFO     | pid: 151301
[2025-04-28 05:32:59] 2025-04-28 02:32:39,236 | INFO     | pgrp: 151301
[2025-04-28 05:32:59] 2025-04-28 02:32:39,236 | INFO     | corecount: 4
[2025-04-28 05:32:59] 2025-04-28 02:32:39,236 | INFO     | event service: False
[2025-04-28 05:32:59] 2025-04-28 02:32:39,236 | INFO     | sizes: {0: 2393728, 2: 2393934, 11: 2393962, 4241: 2420056, 4242: 2420055, 4243: 2429052, 4244: 2429236, 4249: 2429406}
[2025-04-28 05:32:59] 2025-04-28 02:32:39,236 | INFO     | --------------------------------------------------
[2025-04-28 05:32:59] 2025-04-28 02:32:39,236 | INFO     | 
[2025-04-28 05:32:59] 2025-04-28 02:32:39,236 | INFO     | executing command: ls -lF /home/ek/BOINC/slots/2
[2025-04-28 05:32:59] 2025-04-28 02:32:39,251 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-28 05:32:59] 2025-04-28 02:32:39,252 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-28 05:32:59] 2025-04-28 02:32:39,252 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-28 05:32:59] 2025-04-28 02:32:39,252 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-28 05:32:59] 2025-04-28 02:32:39,252 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-28 05:32:59] 2025-04-28 02:32:39,252 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-28 05:32:59] 2025-04-28 02:32:39,252 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-28 05:32:59] 2025-04-28 02:32:39,252 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-28 05:32:59] 2025-04-28 02:32:39,252 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-28 05:32:59] 2025-04-28 02:32:39,252 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-28 05:32:59] 2025-04-28 02:32:39,252 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-28 05:32:59] 2025-04-28 02:32:39,252 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-28 05:32:59] 2025-04-28 02:32:39,252 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-28 05:32:59] 2025-04-28 02:32:39,252 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-28 05:32:59] 2025-04-28 02:32:39,252 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-28 05:32:59] 2025-04-28 02:32:39,252 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-28 05:32:59] 2025-04-28 02:32:39,252 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-28 05:32:59] 2025-04-28 02:32:39,252 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-28 05:32:59] 2025-04-28 02:32:39,252 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-28 05:32:59] 2025-04-28 02:32:39,252 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-28 05:32:59] 2025-04-28 02:32:39,252 | INFO     | job 6617462023 has completed (purged errors)
[2025-04-28 05:32:59] 2025-04-28 02:32:39,252 | INFO     | overall cleanup function is called
[2025-04-28 05:32:59] 2025-04-28 02:32:40,259 | INFO     | --- collectZombieJob: --- 10, [151301]
[2025-04-28 05:32:59] 2025-04-28 02:32:40,259 | INFO     | zombie collector waiting for pid 151301
[2025-04-28 05:32:59] 2025-04-28 02:32:40,259 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-28 05:32:59] 2025-04-28 02:32:40,259 | INFO     | collected zombie processes
[2025-04-28 05:32:59] 2025-04-28 02:32:40,259 | INFO     | will attempt to kill all subprocesses of pid=151301
[2025-04-28 05:32:59] 2025-04-28 02:32:40,397 | INFO     | process IDs to be killed: [151301] (in reverse order)
[2025-04-28 05:32:59] 2025-04-28 02:32:40,457 | WARNING  | found no corresponding commands to process id(s)
[2025-04-28 05:32:59] 2025-04-28 02:32:40,457 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-28 05:32:59] 2025-04-28 02:32:40,460 | INFO     | did not find any defunct processes belonging to 151301
[2025-04-28 05:32:59] 2025-04-28 02:32:40,462 | INFO     | did not find any defunct processes belonging to 151301
[2025-04-28 05:32:59] 2025-04-28 02:32:40,462 | INFO     | ready for new job
[2025-04-28 05:32:59] 2025-04-28 02:32:40,462 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-28 05:32:59] 2025-04-28 02:32:40,462 | INFO     | **************************************
[2025-04-28 05:32:59] 2025-04-28 02:32:40,462 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-28 05:32:59] 2025-04-28 02:32:40,462 | INFO     | **************************************
[2025-04-28 05:32:59] 2025-04-28 02:32:40,462 | INFO     | 
[2025-04-28 05:32:59] 2025-04-28 02:32:40,463 | INFO     | architecture information:
[2025-04-28 05:32:59] 2025-04-28 02:32:40,463 | INFO     | executing command: cat /etc/os-release
[2025-04-28 05:32:59] 2025-04-28 02:32:40,473 | INFO     | cat /etc/os-release:
[2025-04-28 05:32:59] NAME="CentOS Linux"
[2025-04-28 05:32:59] VERSION="7 (Core)"
[2025-04-28 05:32:59] ID="centos"
[2025-04-28 05:32:59] ID_LIKE="rhel fedora"
[2025-04-28 05:32:59] VERSION_ID="7"
[2025-04-28 05:32:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-28 05:32:59] ANSI_COLOR="0;31"
[2025-04-28 05:32:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-28 05:32:59] HOME_URL="https://www.centos.org/"
[2025-04-28 05:32:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-28 05:32:59] 
[2025-04-28 05:32:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-28 05:32:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-28 05:32:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-28 05:32:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-28 05:32:59] 
[2025-04-28 05:32:59] 2025-04-28 02:32:40,473 | INFO     | **************************************
[2025-04-28 05:32:59] 2025-04-28 02:32:40,976 | INFO     | executing command: df -mP /home/ek/BOINC/slots/2
[2025-04-28 05:32:59] 2025-04-28 02:32:40,986 | INFO     | sufficient remaining disk space (104378400768 B)
[2025-04-28 05:32:59] 2025-04-28 02:32:40,986 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-28 05:32:59] 2025-04-28 02:32:40,986 | INFO     | current server update state: UPDATING_FINAL
[2025-04-28 05:32:59] 2025-04-28 02:32:40,986 | INFO     | update_server=False
[2025-04-28 05:32:59] 2025-04-28 02:32:40,986 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-28 05:32:59] 2025-04-28 02:32:40,987 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-28 05:32:59] 2025-04-28 02:32:40,987 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-28 05:32:59] 2025-04-28 02:32:40,987 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-28 05:32:59] 2025-04-28 02:32:40,987 | INFO     | aborting loop
[2025-04-28 05:32:59] 2025-04-28 02:32:40,993 | INFO     | all payload control threads have been joined
[2025-04-28 05:32:59] 2025-04-28 02:32:41,196 | INFO     | PID=142266 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-04-28 05:32:59] 2025-04-28 02:32:41,196 | INFO     | .. there are 3 such processes running
[2025-04-28 05:32:59] 2025-04-28 02:32:41,197 | INFO     | found 0 job(s) in 20 queues
[2025-04-28 05:32:59] 2025-04-28 02:32:41,197 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-28 05:32:59] 2025-04-28 02:32:41,197 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-28 05:32:59] 2025-04-28 02:32:41,796 | INFO     | all data control threads have been joined
[2025-04-28 05:32:59] 2025-04-28 02:32:41,992 | INFO     | [job] retrieve thread has finished
[2025-04-28 05:32:59] 2025-04-28 02:32:41,992 | INFO     | [job] job monitor thread has finished
[2025-04-28 05:32:59] 2025-04-28 02:32:41,992 | INFO     | [job] queue monitor thread has finished
[2025-04-28 05:32:59] 2025-04-28 02:32:41,998 | INFO     | [payload] control thread has finished
[2025-04-28 05:32:59] 2025-04-28 02:32:42,013 | INFO     | [payload] validate_post thread has finished
[2025-04-28 05:32:59] 2025-04-28 02:32:42,399 | INFO     | all job control threads have been joined
[2025-04-28 05:32:59] 2025-04-28 02:32:42,736 | INFO     | [data] copytool_in thread has finished
[2025-04-28 05:32:59] 2025-04-28 02:32:42,756 | INFO     | [payload] failed_post thread has finished
[2025-04-28 05:32:59] 2025-04-28 02:32:42,800 | INFO     | [data] control thread has finished
[2025-04-28 05:32:59] 2025-04-28 02:32:42,871 | INFO     | [payload] execute_payloads thread has finished
[2025-04-28 05:32:59] 2025-04-28 02:32:42,992 | INFO     | [data] copytool_out thread has finished
[2025-04-28 05:32:59] 2025-04-28 02:32:43,404 | INFO     | [job] control thread has finished
[2025-04-28 05:32:59] 2025-04-28 02:32:43,475 | INFO     | [job] validate thread has finished
[2025-04-28 05:32:59] 2025-04-28 02:32:43,477 | INFO     | [job] create_data_payload thread has finished
[2025-04-28 05:32:59] 2025-04-28 02:32:43,478 | INFO     | [payload] validate_pre thread has finished
[2025-04-28 05:32:59] 2025-04-28 02:32:44,312 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-28 05:32:59] 2025-04-28 02:32:48,317 | INFO     | [data] queue_monitor thread has finished
[2025-04-28 05:32:59] 2025-04-28 02:32:51,772 | INFO     | job.realtimelogging is not enabled
[2025-04-28 05:32:59] 2025-04-28 02:32:52,777 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-28 05:32:59] 2025-04-28 02:32:53,750 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140520449255232)>', '<ExcThread(monitor, started 140519913023232)>']
[2025-04-28 05:32:59] 2025-04-28 02:32:54,261 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-28 05:32:59] 2025-04-28 02:32:54,261 | INFO     | [monitor] control thread has ended
[2025-04-28 05:32:59] 2025-04-28 02:32:58,775 | INFO     | all workflow threads have been joined
[2025-04-28 05:32:59] 2025-04-28 02:32:58,775 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-28 05:32:59] 2025-04-28 02:32:58,775 | INFO     | traces error code: 0
[2025-04-28 05:32:59] 2025-04-28 02:32:58,775 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-28 05:32:59] 2025-04-28 02:32:58,863 [wrapper] ==== pilot stdout END ====
[2025-04-28 05:32:59] 2025-04-28 02:32:58,865 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-28 05:32:59] 2025-04-28 02:32:58,867 [wrapper] pilotpid: 142266
[2025-04-28 05:32:59] 2025-04-28 02:32:58,869 [wrapper] Pilot exit status: 0
[2025-04-28 05:32:59] 2025-04-28 02:32:58,878 [wrapper] pandaids: 6617462023
[2025-04-28 05:32:59] 2025-04-28 02:32:58,903 [wrapper] cleanup supervisor_pilot  237310 142267
[2025-04-28 05:32:59] 2025-04-28 02:32:58,905 [wrapper] Test setup, not cleaning
[2025-04-28 05:32:59] 2025-04-28 02:32:58,907 [wrapper] apfmon messages muted
[2025-04-28 05:32:59] 2025-04-28 02:32:58,908 [wrapper] ==== wrapper stdout END ====
[2025-04-28 05:32:59] 2025-04-28 02:32:58,912 [wrapper] ==== wrapper stderr END ====
[2025-04-28 05:32:59]  *** Error codes and diagnostics ***
[2025-04-28 05:32:59]     "exeErrorCode": 0,
[2025-04-28 05:32:59]     "exeErrorDiag": "",
[2025-04-28 05:32:59]     "pilotErrorCode": 0,
[2025-04-28 05:32:59]     "pilotErrorDiag": "",
[2025-04-28 05:32:59]  *** Listing of results directory ***
[2025-04-28 05:32:59] total 221916
[2025-04-28 05:32:59] -rw-r--r-- 1 ek ek    495897 Apr 26 17:59 pilot3.tar.gz
[2025-04-28 05:32:59] -rwx------ 1 ek ek     37140 Apr 26 18:10 runpilot2-wrapper.sh
[2025-04-28 05:32:59] -rw-r--r-- 1 ek ek      5111 Apr 26 18:10 queuedata.json
[2025-04-28 05:32:59] -rw-rw-r-- 1 ek ek       100 Apr 28 04:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-28 05:32:59] -rwxr-xr-x 1 ek ek      7986 Apr 28 04:21 run_atlas
[2025-04-28 05:32:59] -rw-rw-r-- 1 ek ek       105 Apr 28 04:21 job.xml
[2025-04-28 05:32:59] -rw-r--r-- 2 ek ek  28336476 Apr 28 04:21 EVNT.44292255._000528.pool.root.1
[2025-04-28 05:32:59] drwxrwx--x 2 ek ek      4096 Apr 28 04:21 shared
[2025-04-28 05:32:59] -rw-r--r-- 2 ek ek    508873 Apr 28 04:21 input.tar.gz
[2025-04-28 05:32:59] -rw-r--r-- 2 ek ek     17569 Apr 28 04:21 start_atlas.sh
[2025-04-28 05:32:59] -rw-rw-r-- 1 ek ek         0 Apr 28 04:21 boinc_setup_complete
[2025-04-28 05:32:59] -rw-rw-r-- 1 ek ek      9843 Apr 28 04:21 init_data.xml
[2025-04-28 05:32:59] -rw-rw-r-- 1 ek ek         0 Apr 28 04:21 boinc_lockfile
[2025-04-28 05:32:59] -rw-rw-r-- 1 ek ek      2549 Apr 28 04:21 pandaJob.out
[2025-04-28 05:32:59] -rw------- 1 ek ek       460 Apr 28 04:21 setup.sh.local
[2025-04-28 05:32:59] -rw------- 1 ek ek    992863 Apr 28 04:21 agis_schedconf.cvmfs.json
[2025-04-28 05:32:59] -rw------- 1 ek ek   1596659 Apr 28 04:21 agis_ddmendpoints.agis.ALL.json
[2025-04-28 05:32:59] drwx------ 4 ek ek      4096 Apr 28 04:21 pilot3
[2025-04-28 05:32:59] -rw------- 1 ek ek 193742054 Apr 28 05:32 HITS.44292257._010053.pool.root.1
[2025-04-28 05:32:59] -rw------- 1 ek ek        95 Apr 28 05:32 pilot_heartbeat.json
[2025-04-28 05:32:59] -rw-rw-r-- 1 ek ek       529 Apr 28 05:32 boinc_task_state.xml
[2025-04-28 05:32:59] -rw------- 1 ek ek      1054 Apr 28 05:32 memory_monitor_summary.json
[2025-04-28 05:32:59] -rw------- 1 ek ek    228182 Apr 28 05:32 log.44292257._010053.job.log.tgz.1
[2025-04-28 05:32:59] -rw------- 1 ek ek      7731 Apr 28 05:32 heartbeat.json
[2025-04-28 05:32:59] -rw-rw-r-- 1 ek ek        27 Apr 28 05:32 wrapper_checkpoint.txt
[2025-04-28 05:32:59] -rw-rw-r-- 1 ek ek      8192 Apr 28 05:32 boinc_mmap_file
[2025-04-28 05:32:59] -rw------- 1 ek ek      4819 Apr 28 05:32 pilotlog.txt
[2025-04-28 05:32:59] -rw------- 1 ek ek    433610 Apr 28 05:32 log.44292257._010053.job.log.1
[2025-04-28 05:32:59] -rw------- 1 ek ek       357 Apr 28 05:32 output.list
[2025-04-28 05:32:59] -rw-rw-r-- 1 ek ek       620 Apr 28 05:32 runtime_log
[2025-04-28 05:32:59] -rw------- 1 ek ek    675840 Apr 28 05:32 result.tar.gz
[2025-04-28 05:32:59] -rw------- 1 ek ek       668 Apr 28 05:32 Tq7NDmzLwS7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm1kqLDmwtCl5m.diag
[2025-04-28 05:32:59] -rw-rw-r-- 1 ek ek     11415 Apr 28 05:32 runtime_log.err
[2025-04-28 05:32:59] -rw-rw-r-- 1 ek ek     21049 Apr 28 05:32 stderr.txt
[2025-04-28 05:32:59] HITS file was successfully produced:
[2025-04-28 05:32:59] -rw------- 1 ek ek 193742054 Apr 28 05:32 shared/HITS.pool.root.1
[2025-04-28 05:32:59]  *** Contents of shared directory: ***
[2025-04-28 05:32:59] total 218064
[2025-04-28 05:32:59] -rw-r--r-- 2 ek ek  28336476 Apr 28 04:21 ATLAS.root_0
[2025-04-28 05:32:59] -rw-r--r-- 2 ek ek    508873 Apr 28 04:21 input.tar.gz
[2025-04-28 05:32:59] -rw-r--r-- 2 ek ek     17569 Apr 28 04:21 start_atlas.sh
[2025-04-28 05:32:59] -rw------- 1 ek ek 193742054 Apr 28 05:32 HITS.pool.root.1
[2025-04-28 05:32:59] -rw------- 1 ek ek    675840 Apr 28 05:32 result.tar.gz
05:33:00 (138471): run_atlas exited; CPU time 15389.748900
05:33:00 (138471): called boinc_finish(0)

</stderr_txt>
]]>

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