Stderr output

<core_client_version>8.2.1</core_client_version>
<![CDATA[
<stderr_txt>
16:47:47 (2391941): wrapper (7.7.26015): starting
16:47:47 (2391941): wrapper: running run_atlas (--nthreads 4)
[2025-04-27 16:47:47] Arguments: --nthreads 4
[2025-04-27 16:47:47] Threads: 4
[2025-04-27 16:47:47] Checking for CVMFS
[2025-04-27 16:47:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-27 16:47:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-27 16:47:47] Running cvmfs_config stat atlas.cern.ch
[2025-04-27 16:47:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-27 16:47:47] 2.12.7.0 31438 2408 47376 145339 1 56 21541668 33554433 0 130560 0 2321108 99.992 716664 6400 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.0.1:25468 1
[2025-04-27 16:47:47] CVMFS is ok
[2025-04-27 16:47:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-27 16:47:47] Checking for apptainer binary...
[2025-04-27 16:47:47] apptainer is not installed, using version from CVMFS
[2025-04-27 16:47:47] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-27 16:47:47] Evangelos-Katikos
[2025-04-27 16:47:47] apptainer works
[2025-04-27 16:47:47] Set ATHENA_PROC_NUMBER=4
[2025-04-27 16:47:47] Set ATHENA_CORE_NUMBER=4
[2025-04-27 16:47:47] Starting ATLAS job with PandaID=6606395071
[2025-04-27 16:47:47] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/home/ek/BOINC/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-27 18:08:57]  *** The last 200 lines of the pilot log: ***
[2025-04-27 18:08:57]  is_altstaged=None
[2025-04-27 18:08:57]  is_tar=False
[2025-04-27 18:08:57]  lfn=log.44075483._068389.job.log.tgz.1
[2025-04-27 18:08:57]  mtime=0
[2025-04-27 18:08:57]  protocol_id=None
[2025-04-27 18:08:57]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-27 18:08:57]  replicas=None
[2025-04-27 18:08:57]  scope=mc23_13p6TeV
[2025-04-27 18:08:57]  status=None
[2025-04-27 18:08:57]  status_code=0
[2025-04-27 18:08:57]  storage_token=
[2025-04-27 18:08:57]  surl=/home/ek/BOINC/slots/3/PanDA_Pilot-6606395071/log.44075483._068389.job.log.tgz.1
[2025-04-27 18:08:57]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/97/1d/log.44075483._068389.job.log.tgz.1
[2025-04-27 18:08:57]  workdir=None
[2025-04-27 18:08:57] ]
[2025-04-27 18:08:57] 2025-04-27 15:08:30,014 | INFO     | transferring file log.44075483._068389.job.log.tgz.1 from /home/ek/BOINC/slots/3/PanDA_Pilot-6606395071/log.44075483._068389.job.log.tgz.1 to /home/ek/BOINC/slots/
[2025-04-27 18:08:57] 2025-04-27 15:08:30,014 | INFO     | executing command: /usr/bin/env mv /home/ek/BOINC/slots/3/PanDA_Pilot-6606395071/log.44075483._068389.job.log.tgz.1 /home/ek/BOINC/slots/3/log.44075483._068389.job
[2025-04-27 18:08:57] 2025-04-27 15:08:30,028 | INFO     | adding to output.list: log.44075483._068389.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/97/1d/log.44075483._068389.job.log.tg
[2025-04-27 18:08:57] 2025-04-27 15:08:30,028 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-27 18:08:57] 2025-04-27 15:08:30,028 | INFO     | summary of transferred files:
[2025-04-27 18:08:57] 2025-04-27 15:08:30,028 | INFO     |  -- lfn=log.44075483._068389.job.log.tgz.1, status_code=0, status=transferred
[2025-04-27 18:08:57] 2025-04-27 15:08:30,029 | INFO     | stage-out finished correctly
[2025-04-27 18:08:57] 2025-04-27 15:08:30,822 | INFO     | monitor loop #366: job 0:6606395071 is in state 'finished'
[2025-04-27 18:08:57] 2025-04-27 15:08:30,823 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-27 18:08:57] 2025-04-27 15:08:31,539 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-27 18:08:57] 2025-04-27 15:08:33,325 | INFO     | monitor loop #367: job 0:6606395071 is in state 'finished'
[2025-04-27 18:08:57] 2025-04-27 15:08:33,326 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-27 18:08:57] 2025-04-27 15:08:34,079 | INFO     | job 6606395071 has state=finished
[2025-04-27 18:08:57] 2025-04-27 15:08:34,079 | INFO     | preparing for final server update for job 6606395071 in state='finished'
[2025-04-27 18:08:57] 2025-04-27 15:08:34,080 | INFO     | this job has now completed (state=finished)
[2025-04-27 18:08:57] 2025-04-27 15:08:34,080 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-27 18:08:57] 2025-04-27 15:08:34,080 | INFO     | log transfer has been attempted: DONE
[2025-04-27 18:08:57] 2025-04-27 15:08:34,080 | INFO     | job 6606395071 has finished - writing final server update
[2025-04-27 18:08:57] 2025-04-27 15:08:34,080 | INFO     | total number of processed events: 400 (read)
[2025-04-27 18:08:57] 2025-04-27 15:08:34,081 | INFO     | executing command: lscpu
[2025-04-27 18:08:57] 2025-04-27 15:08:34,102 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-27 18:08:57] 2025-04-27 15:08:35,772 | INFO     | PID=2395697 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-27 18:08:57] 2025-04-27 15:08:35,828 | INFO     | monitor loop #368: job 0:6606395071 is in state 'finished'
[2025-04-27 18:08:57] 2025-04-27 15:08:35,828 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-27 18:08:57] 2025-04-27 15:08:36,802 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-27 18:08:57] 2025-04-27 15:08:36,802 | INFO     | using path: /home/ek/BOINC/slots/3/PanDA_Pilot-6606395071/memory_monitor_summary.json (trf name=prmon)
[2025-04-27 18:08:57] 2025-04-27 15:08:36,802 | INFO     | extracted standard info from prmon json
[2025-04-27 18:08:57] 2025-04-27 15:08:36,802 | INFO     | extracted standard memory fields from prmon json
[2025-04-27 18:08:57] 2025-04-27 15:08:36,802 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-27 18:08:57] 2025-04-27 15:08:36,803 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-27 18:08:57] 2025-04-27 15:08:36,803 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-27 18:08:57] 2025-04-27 15:08:36,803 | INFO     | fitting pss+swap vs Time
[2025-04-27 18:08:57] 2025-04-27 15:08:36,803 | INFO     | sum of square deviations: 115715658.0
[2025-04-27 18:08:57] 2025-04-27 15:08:36,803 | INFO     | sum of deviations: -7450127060.5
[2025-04-27 18:08:57] 2025-04-27 15:08:36,803 | INFO     | mean x: 1745764162.5
[2025-04-27 18:08:57] 2025-04-27 15:08:36,804 | INFO     | mean y: 2434945.375
[2025-04-27 18:08:57] 2025-04-27 15:08:36,804 | INFO     | -- intersect: 112400057299.06174
[2025-04-27 18:08:57] 2025-04-27 15:08:36,804 | INFO     | intersect: 112400057299.06174
[2025-04-27 18:08:57] 2025-04-27 15:08:36,804 | INFO     | chi2: 0.15353389662815867
[2025-04-27 18:08:57] 2025-04-27 15:08:36,804 | INFO     | -- intersect: 112400057299.06174
[2025-04-27 18:08:57] 2025-04-27 15:08:36,804 | INFO     | current memory leak: -64.38 B/s (using 72 data points, chi2=0.15)
[2025-04-27 18:08:57] 2025-04-27 15:08:36,804 | INFO     | ..............................
[2025-04-27 18:08:57] 2025-04-27 15:08:36,804 | INFO     | . Timing measurements:
[2025-04-27 18:08:57] 2025-04-27 15:08:36,804 | INFO     | . get job = 0 s
[2025-04-27 18:08:57] 2025-04-27 15:08:36,804 | INFO     | . initial setup = 1 s
[2025-04-27 18:08:57] 2025-04-27 15:08:36,804 | INFO     | . payload setup = 3 s
[2025-04-27 18:08:57] 2025-04-27 15:08:36,804 | INFO     | . stage-in = 0 s
[2025-04-27 18:08:57] 2025-04-27 15:08:36,804 | INFO     | . payload execution = 4815 s
[2025-04-27 18:08:57] 2025-04-27 15:08:36,804 | INFO     | . stage-out = 0 s
[2025-04-27 18:08:57] 2025-04-27 15:08:36,804 | INFO     | . log creation = 0 s
[2025-04-27 18:08:57] 2025-04-27 15:08:36,804 | INFO     | ..............................
[2025-04-27 18:08:57] 2025-04-27 15:08:36,836 | INFO     | 
[2025-04-27 18:08:57] 2025-04-27 15:08:36,836 | INFO     | job summary report
[2025-04-27 18:08:57] 2025-04-27 15:08:36,836 | INFO     | --------------------------------------------------
[2025-04-27 18:08:57] 2025-04-27 15:08:36,836 | INFO     | PanDA job id: 6606395071
[2025-04-27 18:08:57] 2025-04-27 15:08:36,836 | INFO     | task id: 44075483
[2025-04-27 18:08:57] 2025-04-27 15:08:36,836 | INFO     | errors: (none)
[2025-04-27 18:08:57] 2025-04-27 15:08:36,836 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-27 18:08:57] 2025-04-27 15:08:36,836 | INFO     | pilot state: finished 
[2025-04-27 18:08:57] 2025-04-27 15:08:36,836 | INFO     | transexitcode: 0
[2025-04-27 18:08:57] 2025-04-27 15:08:36,836 | INFO     | exeerrorcode: 0
[2025-04-27 18:08:57] 2025-04-27 15:08:36,836 | INFO     | exeerrordiag: 
[2025-04-27 18:08:57] 2025-04-27 15:08:36,836 | INFO     | exitcode: 0
[2025-04-27 18:08:57] 2025-04-27 15:08:36,836 | INFO     | exitmsg: OK
[2025-04-27 18:08:57] 2025-04-27 15:08:36,836 | INFO     | cpuconsumptiontime: 17624 s
[2025-04-27 18:08:57] 2025-04-27 15:08:36,836 | INFO     | nevents: 400
[2025-04-27 18:08:57] 2025-04-27 15:08:36,836 | INFO     | neventsw: 0
[2025-04-27 18:08:57] 2025-04-27 15:08:36,836 | INFO     | pid: 2402401
[2025-04-27 18:08:57] 2025-04-27 15:08:36,837 | INFO     | pgrp: 2402401
[2025-04-27 18:08:57] 2025-04-27 15:08:36,837 | INFO     | corecount: 4
[2025-04-27 18:08:57] 2025-04-27 15:08:36,837 | INFO     | event service: False
[2025-04-27 18:08:57] 2025-04-27 15:08:36,837 | INFO     | sizes: {0: 2393651, 1: 2393765, 3: 2393999, 11: 2394027, 4822: 2420290, 4824: 2429231, 4825: 2429415, 4831: 2429585}
[2025-04-27 18:08:57] 2025-04-27 15:08:36,837 | INFO     | --------------------------------------------------
[2025-04-27 18:08:57] 2025-04-27 15:08:36,837 | INFO     | 
[2025-04-27 18:08:57] 2025-04-27 15:08:36,837 | INFO     | executing command: ls -lF /home/ek/BOINC/slots/3
[2025-04-27 18:08:57] 2025-04-27 15:08:36,852 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-27 18:08:57] 2025-04-27 15:08:36,852 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-27 18:08:57] 2025-04-27 15:08:36,852 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-27 18:08:57] 2025-04-27 15:08:36,852 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-27 18:08:57] 2025-04-27 15:08:36,852 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-27 18:08:57] 2025-04-27 15:08:36,852 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-27 18:08:57] 2025-04-27 15:08:36,852 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-27 18:08:57] 2025-04-27 15:08:36,852 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-27 18:08:57] 2025-04-27 15:08:36,852 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-27 18:08:57] 2025-04-27 15:08:36,852 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-27 18:08:57] 2025-04-27 15:08:36,852 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-27 18:08:57] 2025-04-27 15:08:36,852 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-27 18:08:57] 2025-04-27 15:08:36,852 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-27 18:08:57] 2025-04-27 15:08:36,852 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-27 18:08:57] 2025-04-27 15:08:36,852 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-27 18:08:57] 2025-04-27 15:08:36,853 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-27 18:08:57] 2025-04-27 15:08:36,853 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-27 18:08:57] 2025-04-27 15:08:36,853 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-27 18:08:57] 2025-04-27 15:08:36,853 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-27 18:08:57] 2025-04-27 15:08:36,853 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-27 18:08:57] 2025-04-27 15:08:36,853 | INFO     | job 6606395071 has completed (purged errors)
[2025-04-27 18:08:57] 2025-04-27 15:08:36,853 | INFO     | overall cleanup function is called
[2025-04-27 18:08:57] 2025-04-27 15:08:37,860 | INFO     | --- collectZombieJob: --- 10, [2402401]
[2025-04-27 18:08:57] 2025-04-27 15:08:37,860 | INFO     | zombie collector waiting for pid 2402401
[2025-04-27 18:08:57] 2025-04-27 15:08:37,860 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-27 18:08:57] 2025-04-27 15:08:37,860 | INFO     | collected zombie processes
[2025-04-27 18:08:57] 2025-04-27 15:08:37,860 | INFO     | will attempt to kill all subprocesses of pid=2402401
[2025-04-27 18:08:57] 2025-04-27 15:08:38,010 | INFO     | process IDs to be killed: [2402401] (in reverse order)
[2025-04-27 18:08:57] 2025-04-27 15:08:38,069 | WARNING  | found no corresponding commands to process id(s)
[2025-04-27 18:08:57] 2025-04-27 15:08:38,069 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-27 18:08:57] 2025-04-27 15:08:38,073 | INFO     | did not find any defunct processes belonging to 2402401
[2025-04-27 18:08:57] 2025-04-27 15:08:38,076 | INFO     | did not find any defunct processes belonging to 2402401
[2025-04-27 18:08:57] 2025-04-27 15:08:38,077 | INFO     | ready for new job
[2025-04-27 18:08:57] 2025-04-27 15:08:38,077 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-27 18:08:57] 2025-04-27 15:08:38,077 | INFO     | **************************************
[2025-04-27 18:08:57] 2025-04-27 15:08:38,078 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-27 18:08:57] 2025-04-27 15:08:38,078 | INFO     | **************************************
[2025-04-27 18:08:57] 2025-04-27 15:08:38,078 | INFO     | 
[2025-04-27 18:08:57] 2025-04-27 15:08:38,078 | INFO     | architecture information:
[2025-04-27 18:08:57] 2025-04-27 15:08:38,079 | INFO     | executing command: cat /etc/os-release
[2025-04-27 18:08:57] 2025-04-27 15:08:38,088 | INFO     | cat /etc/os-release:
[2025-04-27 18:08:57] NAME="CentOS Linux"
[2025-04-27 18:08:57] VERSION="7 (Core)"
[2025-04-27 18:08:57] ID="centos"
[2025-04-27 18:08:57] ID_LIKE="rhel fedora"
[2025-04-27 18:08:57] VERSION_ID="7"
[2025-04-27 18:08:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-27 18:08:57] ANSI_COLOR="0;31"
[2025-04-27 18:08:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-27 18:08:57] HOME_URL="https://www.centos.org/"
[2025-04-27 18:08:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-27 18:08:57] 
[2025-04-27 18:08:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-27 18:08:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-27 18:08:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-27 18:08:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-27 18:08:57] 
[2025-04-27 18:08:57] 2025-04-27 15:08:38,088 | INFO     | **************************************
[2025-04-27 18:08:57] 2025-04-27 15:08:38,591 | INFO     | executing command: df -mP /home/ek/BOINC/slots/3
[2025-04-27 18:08:57] 2025-04-27 15:08:38,602 | INFO     | sufficient remaining disk space (100218699776 B)
[2025-04-27 18:08:57] 2025-04-27 15:08:38,602 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-27 18:08:57] 2025-04-27 15:08:38,602 | INFO     | current server update state: UPDATING_FINAL
[2025-04-27 18:08:57] 2025-04-27 15:08:38,602 | INFO     | update_server=False
[2025-04-27 18:08:57] 2025-04-27 15:08:38,602 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-27 18:08:57] 2025-04-27 15:08:38,602 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-27 18:08:57] 2025-04-27 15:08:38,602 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-27 18:08:57] 2025-04-27 15:08:38,603 | INFO     | found 0 job(s) in 20 queues
[2025-04-27 18:08:57] 2025-04-27 15:08:38,603 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-27 18:08:57] 2025-04-27 15:08:38,603 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-27 18:08:57] 2025-04-27 15:08:38,603 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-27 18:08:57] 2025-04-27 15:08:38,998 | INFO     | all data control threads have been joined
[2025-04-27 18:08:57] 2025-04-27 15:08:39,342 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-27 18:08:57] 2025-04-27 15:08:39,343 | INFO     | aborting loop
[2025-04-27 18:08:57] 2025-04-27 15:08:39,607 | INFO     | [job] retrieve thread has finished
[2025-04-27 18:08:57] 2025-04-27 15:08:39,608 | INFO     | [job] queue monitor thread has finished
[2025-04-27 18:08:57] 2025-04-27 15:08:39,713 | INFO     | all payload control threads have been joined
[2025-04-27 18:08:57] 2025-04-27 15:08:39,862 | INFO     | [data] copytool_in thread has finished
[2025-04-27 18:08:57] 2025-04-27 15:08:40,003 | INFO     | [data] control thread has finished
[2025-04-27 18:08:57] 2025-04-27 15:08:40,201 | INFO     | [payload] failed_post thread has finished
[2025-04-27 18:08:57] 2025-04-27 15:08:40,213 | INFO     | all job control threads have been joined
[2025-04-27 18:08:57] 2025-04-27 15:08:40,348 | INFO     | [job] job monitor thread has finished
[2025-04-27 18:08:57] 2025-04-27 15:08:40,412 | INFO     | [job] validate thread has finished
[2025-04-27 18:08:57] 2025-04-27 15:08:40,567 | INFO     | [job] create_data_payload thread has finished
[2025-04-27 18:08:57] 2025-04-27 15:08:40,602 | INFO     | [payload] validate_pre thread has finished
[2025-04-27 18:08:57] 2025-04-27 15:08:40,607 | INFO     | [data] copytool_out thread has finished
[2025-04-27 18:08:57] 2025-04-27 15:08:40,718 | INFO     | [payload] control thread has finished
[2025-04-27 18:08:57] 2025-04-27 15:08:40,735 | INFO     | [payload] validate_post thread has finished
[2025-04-27 18:08:57] 2025-04-27 15:08:40,963 | INFO     | [payload] execute_payloads thread has finished
[2025-04-27 18:08:57] 2025-04-27 15:08:41,218 | INFO     | [job] control thread has finished
[2025-04-27 18:08:57] 2025-04-27 15:08:42,081 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-27 18:08:57] 2025-04-27 15:08:46,086 | INFO     | [data] queue_monitor thread has finished
[2025-04-27 18:08:57] 2025-04-27 15:08:49,341 | INFO     | job.realtimelogging is not enabled
[2025-04-27 18:08:57] 2025-04-27 15:08:50,346 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-27 18:08:57] 2025-04-27 15:08:52,374 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139764279289664)>', '<ExcThread(monitor, started 139763950520064)>']
[2025-04-27 18:08:57] 2025-04-27 15:08:52,674 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-27 18:08:57] 2025-04-27 15:08:52,674 | INFO     | [monitor] control thread has ended
[2025-04-27 18:08:57] 2025-04-27 15:08:57,399 | INFO     | all workflow threads have been joined
[2025-04-27 18:08:57] 2025-04-27 15:08:57,400 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-27 18:08:57] 2025-04-27 15:08:57,400 | INFO     | traces error code: 0
[2025-04-27 18:08:57] 2025-04-27 15:08:57,400 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-27 18:08:57] 2025-04-27 15:08:57,469 [wrapper] ==== pilot stdout END ====
[2025-04-27 18:08:57] 2025-04-27 15:08:57,472 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-27 18:08:57] 2025-04-27 15:08:57,477 [wrapper] pilotpid: 2395697
[2025-04-27 18:08:57] 2025-04-27 15:08:57,481 [wrapper] Pilot exit status: 0
[2025-04-27 18:08:57] 2025-04-27 15:08:57,490 [wrapper] pandaids: 6606395071
[2025-04-27 18:08:57] 2025-04-27 15:08:57,522 [wrapper] cleanup supervisor_pilot 2461446 2395698
[2025-04-27 18:08:57] 2025-04-27 15:08:57,524 [wrapper] Test setup, not cleaning
[2025-04-27 18:08:57] 2025-04-27 15:08:57,526 [wrapper] apfmon messages muted
[2025-04-27 18:08:57] 2025-04-27 15:08:57,528 [wrapper] ==== wrapper stdout END ====
[2025-04-27 18:08:57] 2025-04-27 15:08:57,530 [wrapper] ==== wrapper stderr END ====
[2025-04-27 18:08:57]  *** Error codes and diagnostics ***
[2025-04-27 18:08:57]     "exeErrorCode": 0,
[2025-04-27 18:08:57]     "exeErrorDiag": "",
[2025-04-27 18:08:57]     "pilotErrorCode": 0,
[2025-04-27 18:08:57]     "pilotErrorDiag": "",
[2025-04-27 18:08:57]  *** Listing of results directory ***
[2025-04-27 18:08:57] total 420920
[2025-04-27 18:08:57] -rw-r--r-- 1 ek ek    495897 Apr 18 13:44 pilot3.tar.gz
[2025-04-27 18:08:57] -rwx------ 1 ek ek     37140 Apr 18 14:00 runpilot2-wrapper.sh
[2025-04-27 18:08:57] -rw-r--r-- 1 ek ek      5111 Apr 18 14:00 queuedata.json
[2025-04-27 18:08:57] -rw-rw-r-- 1 ek ek       100 Apr 27 16:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-27 18:08:57] -rwxr-xr-x 1 ek ek      7986 Apr 27 16:47 run_atlas
[2025-04-27 18:08:57] -rw-rw-r-- 1 ek ek       105 Apr 27 16:47 job.xml
[2025-04-27 18:08:57] -rw-r--r-- 2 ek ek 223103887 Apr 27 16:47 EVNT.44075481._002657.pool.root.1
[2025-04-27 18:08:57] -rw-r--r-- 2 ek ek    508891 Apr 27 16:47 input.tar.gz
[2025-04-27 18:08:57] -rw-r--r-- 2 ek ek     17569 Apr 27 16:47 start_atlas.sh
[2025-04-27 18:08:57] drwxrwx--x 2 ek ek      4096 Apr 27 16:47 shared
[2025-04-27 18:08:57] -rw-rw-r-- 1 ek ek         0 Apr 27 16:47 boinc_setup_complete
[2025-04-27 18:08:57] -rw-rw-r-- 1 ek ek      9843 Apr 27 16:47 init_data.xml
[2025-04-27 18:08:57] -rw-rw-r-- 1 ek ek         0 Apr 27 16:47 boinc_lockfile
[2025-04-27 18:08:57] -rw-rw-r-- 1 ek ek      2578 Apr 27 16:47 pandaJob.out
[2025-04-27 18:08:57] -rw------- 1 ek ek       460 Apr 27 16:47 setup.sh.local
[2025-04-27 18:08:57] -rw------- 1 ek ek    992879 Apr 27 16:47 agis_schedconf.cvmfs.json
[2025-04-27 18:08:57] -rw------- 1 ek ek   1596659 Apr 27 16:47 agis_ddmendpoints.agis.ALL.json
[2025-04-27 18:08:57] drwx------ 4 ek ek      4096 Apr 27 16:47 pilot3
[2025-04-27 18:08:57] -rw------- 1 ek ek 202646018 Apr 27 18:08 HITS.44075483._068389.pool.root.1
[2025-04-27 18:08:57] -rw-rw-r-- 1 ek ek       529 Apr 27 18:08 boinc_task_state.xml
[2025-04-27 18:08:57] -rw------- 1 ek ek      1035 Apr 27 18:08 memory_monitor_summary.json
[2025-04-27 18:08:57] -rw------- 1 ek ek    243267 Apr 27 18:08 log.44075483._068389.job.log.tgz.1
[2025-04-27 18:08:57] -rw------- 1 ek ek      7707 Apr 27 18:08 heartbeat.json
[2025-04-27 18:08:57] -rw------- 1 ek ek        95 Apr 27 18:08 pilot_heartbeat.json
[2025-04-27 18:08:57] -rw-rw-r-- 1 ek ek        27 Apr 27 18:08 wrapper_checkpoint.txt
[2025-04-27 18:08:57] -rw-rw-r-- 1 ek ek      8192 Apr 27 18:08 boinc_mmap_file
[2025-04-27 18:08:57] -rw------- 1 ek ek      4549 Apr 27 18:08 pilotlog.txt
[2025-04-27 18:08:57] -rw------- 1 ek ek    468115 Apr 27 18:08 log.44075483._068389.job.log.1
[2025-04-27 18:08:57] -rw------- 1 ek ek       357 Apr 27 18:08 output.list
[2025-04-27 18:08:57] -rw-rw-r-- 1 ek ek       620 Apr 27 18:08 runtime_log
[2025-04-27 18:08:57] -rw------- 1 ek ek    727040 Apr 27 18:08 result.tar.gz
[2025-04-27 18:08:57] -rw------- 1 ek ek       666 Apr 27 18:08 weZMDmGdyP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmz8eLDmmu2Avn.diag
[2025-04-27 18:08:57] -rw-rw-r-- 1 ek ek     11415 Apr 27 18:08 runtime_log.err
[2025-04-27 18:08:57] -rw-rw-r-- 1 ek ek     21213 Apr 27 18:08 stderr.txt
[2025-04-27 18:08:57] HITS file was successfully produced:
[2025-04-27 18:08:57] -rw------- 1 ek ek 202646018 Apr 27 18:08 shared/HITS.pool.root.1
[2025-04-27 18:08:57]  *** Contents of shared directory: ***
[2025-04-27 18:08:57] total 417016
[2025-04-27 18:08:57] -rw-r--r-- 2 ek ek 223103887 Apr 27 16:47 ATLAS.root_0
[2025-04-27 18:08:57] -rw-r--r-- 2 ek ek    508891 Apr 27 16:47 input.tar.gz
[2025-04-27 18:08:57] -rw-r--r-- 2 ek ek     17569 Apr 27 16:47 start_atlas.sh
[2025-04-27 18:08:57] -rw------- 1 ek ek 202646018 Apr 27 18:08 HITS.pool.root.1
[2025-04-27 18:08:57] -rw------- 1 ek ek    727040 Apr 27 18:08 result.tar.gz
18:08:58 (2391941): run_atlas exited; CPU time 17689.416311
18:08:58 (2391941): called boinc_finish(0)

</stderr_txt>
]]>

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