Stderr output

<core_client_version>8.2.1</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-27 00:29:44 (56020): Detected: vboxwrapper 26206
2025-04-27 00:29:44 (56020): Detected: BOINC client v8.2.1
2025-04-27 00:29:45 (56020): Detected: VirtualBox VboxManage Interface (Version: 7.1.8)
2025-04-27 00:29:45 (56020): Successfully copied 'init_data.xml' to the shared directory.
2025-04-27 00:29:46 (56020): Create VM. (boinc_f92abfe1238efde9, slot#9)
2025-04-27 00:29:46 (56020): Setting Memory Size for VM. (4096MB)
2025-04-27 00:29:46 (56020): Setting CPU Count for VM. (1)
2025-04-27 00:29:47 (56020): Setting Chipset Options for VM.
2025-04-27 00:29:47 (56020): Setting Graphics Controller Options for VM.
2025-04-27 00:29:47 (56020): Setting Boot Options for VM.
2025-04-27 00:29:47 (56020): Setting Network Configuration for NAT.
2025-04-27 00:29:48 (56020): Enabling VM Network Access.
2025-04-27 00:29:48 (56020): Disabling USB Support for VM.
2025-04-27 00:29:48 (56020): Disabling COM Port Support for VM.
2025-04-27 00:29:48 (56020): Disabling LPT Port Support for VM.
2025-04-27 00:29:49 (56020): Disabling Audio Support for VM.
2025-04-27 00:29:49 (56020): Disabling Clipboard Support for VM.
2025-04-27 00:29:49 (56020): Disabling Drag and Drop Support for VM.
2025-04-27 00:29:49 (56020): Adding storage controller(s) to VM.
2025-04-27 00:29:50 (56020): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-27 00:29:50 (56020): Adding VirtualBox Guest Additions to VM.
2025-04-27 00:29:51 (56020): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-27 00:29:51 (56020): forwarding host port 62954 to guest port 80
2025-04-27 00:29:51 (56020): Enabling remote desktop for VM.
2025-04-27 00:29:51 (56020): Required extension pack not installed, remote desktop not enabled.
2025-04-27 00:29:51 (56020): Enabling shared directory for VM.
2025-04-27 00:29:52 (56020): Starting VM using VBoxManage interface. (boinc_f92abfe1238efde9, slot#9)
2025-04-27 00:29:56 (56020): Successfully started VM. (PID = '26824')
2025-04-27 00:29:56 (56020): Reporting VM Process ID to BOINC.
2025-04-27 00:29:56 (56020): Guest Log: BIOS: VirtualBox 7.1.8
2025-04-27 00:29:56 (56020): Guest Log: CPUID EDX: 0x178bfbff
2025-04-27 00:29:56 (56020): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-27 00:29:56 (56020): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-27 00:29:56 (56020): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-27 00:29:56 (56020): Detected: Web Application Enabled (http://localhost:62954)
2025-04-27 00:29:56 (56020): Preference change detected
2025-04-27 00:29:56 (56020): Setting CPU throttle for VM. (100%)
2025-04-27 00:29:57 (56020): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-27 00:29:58 (56020): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-27 00:29:58 (56020): Guest Log: BIOS: Booting from Hard Disk...
2025-04-27 00:30:00 (56020): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-27 00:30:00 (56020): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-27 00:30:00 (56020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-27 00:30:00 (56020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-27 00:30:00 (56020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-27 00:30:00 (56020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-27 00:30:00 (56020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-27 00:30:00 (56020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-27 00:30:00 (56020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-27 00:30:00 (56020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-27 00:30:00 (56020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-27 00:30:00 (56020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-27 00:30:00 (56020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-27 00:30:00 (56020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-27 00:30:00 (56020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-27 00:30:00 (56020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-27 00:30:00 (56020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-27 00:30:00 (56020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-27 00:30:00 (56020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-27 00:30:00 (56020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-27 00:30:00 (56020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-27 00:30:00 (56020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-27 00:30:00 (56020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-27 00:30:00 (56020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-27 00:30:00 (56020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-27 00:30:00 (56020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-27 00:30:00 (56020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-27 00:30:00 (56020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-27 00:30:00 (56020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-27 00:30:00 (56020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-27 00:30:00 (56020): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-27 00:30:00 (56020): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-27 00:30:03 (56020): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-27 00:30:03 (56020): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-27 00:30:08 (56020): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-27 00:30:08 (56020): Guest Log: 00:00:00.000098 main     Log opened 2025-04-27T00:30:06.811702000Z
2025-04-27 00:30:08 (56020): Guest Log: 00:00:00.000201 main     OS Product: Linux
2025-04-27 00:30:08 (56020): Guest Log: 00:00:00.000221 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-27 00:30:08 (56020): Guest Log: 00:00:00.000236 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-27 00:30:08 (56020): Guest Log: 00:00:00.000251 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-27 00:30:08 (56020): Guest Log: 00:00:00.000251 main     Process ID: 1245
2025-04-27 00:30:08 (56020): Guest Log: 00:00:00.000252 main     Package type: LINUX_64BITS_GENERIC
2025-04-27 00:30:08 (56020): Guest Log: 00:00:00.001193 main     5.2.32 r132073 started. Verbose level = 0
2025-04-27 00:30:08 (56020): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-27 00:30:08 (56020): Guest Log: [INFO] Mounting shared directory
2025-04-27 00:30:08 (56020): Guest Log: [INFO] Checking for init_data.xml
2025-04-27 00:30:14 (56020): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-27 00:30:14 (56020): Guest Log: [INFO] Detected branch: prod
2025-04-27 00:30:14 (56020): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-27 00:30:14 (56020): Guest Log: Copying input files
2025-04-27 00:30:15 (56020): Guest Log: Copied input files into RunAtlas.
2025-04-27 00:30:15 (56020): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.179:3128 - will set in /etc/cvmfs/default.local
2025-04-27 00:30:18 (56020): Guest Log: 00:00:10.013565 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 315 294 000ns (GuestNow=1 745 706 618 509 415 000 ns GuestLast=1 745 713 806 824 709 000 ns fSetTimeLastLoop=true )
2025-04-27 00:30:24 (56020): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-27 00:30:24 (56020): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-27 00:30:24 (56020): Guest Log: 2.6.3.0 1518 0 31552 145318 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.179:3128 1
2025-04-27 00:30:24 (56020): Guest Log: copied the webapp to /var/www
2025-04-27 00:30:24 (56020): Guest Log: core_number=1
2025-04-27 00:30:24 (56020): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-27 00:30:24 (56020): Guest Log:  *** Starting ATLAS job. (PandaID=6617457085 taskID=44292257) ***
2025-04-27 02:09:59 (56020): Status Report: Elapsed Time: '6000.000000'
2025-04-27 02:09:59 (56020): Status Report: CPU Time: '5778.578125'
2025-04-27 03:50:02 (56020): Status Report: Elapsed Time: '12000.000000'
2025-04-27 03:50:02 (56020): Status Report: CPU Time: '11754.578125'
2025-04-27 05:30:16 (56020): Status Report: Elapsed Time: '18000.000000'
2025-04-27 05:30:16 (56020): Status Report: CPU Time: '17730.921875'
2025-04-27 07:10:18 (56020): Status Report: Elapsed Time: '24000.000000'
2025-04-27 07:10:18 (56020): Status Report: CPU Time: '23707.046875'
2025-04-27 08:15:14 (56020): Guest Log:  *** Job finished ***
2025-04-27 08:15:14 (56020): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-27 08:15:14 (56020): Guest Log: 2025-04-27 06:14:45,039 | INFO     | [payload] validate_pre thread has finished
2025-04-27 08:15:14 (56020): Guest Log: 2025-04-27 06:14:45,051 | INFO     | [payload] validate_post thread has finished
2025-04-27 08:15:14 (56020): Guest Log: 2025-04-27 06:14:48,625 | INFO     | [data] queue_monitor thread has finished
2025-04-27 08:15:14 (56020): Guest Log: 2025-04-27 06:14:48,745 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140086311106368)>', '<ExcThread(monitor, started 140085651564288)>']
2025-04-27 08:15:14 (56020): Guest Log: 2025-04-27 06:14:49,650 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-27 08:15:14 (56020): Guest Log: 2025-04-27 06:14:49,650 | INFO     | [monitor] control thread has ended
2025-04-27 08:15:14 (56020): Guest Log: 2025-04-27 06:14:53,750 | INFO     | all workflow threads have been joined
2025-04-27 08:15:14 (56020): Guest Log: 2025-04-27 06:14:53,750 | INFO     | end of generic workflow (traces error code: 0)
2025-04-27 08:15:14 (56020): Guest Log: 2025-04-27 06:14:53,751 | INFO     | traces error code: 0
2025-04-27 08:15:14 (56020): Guest Log: 2025-04-27 06:14:53,751 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-27 08:15:14 (56020): Guest Log: 2025-04-27 06:14:53,841 [wrapper] ==== pilot stdout END ====
2025-04-27 08:15:14 (56020): Guest Log: 2025-04-27 06:14:53,843 [wrapper] ==== wrapper stdout RESUME ====
2025-04-27 08:15:14 (56020): Guest Log: 2025-04-27 06:14:53,845 [wrapper] pilotpid: 5772
2025-04-27 08:15:14 (56020): Guest Log: 2025-04-27 06:14:53,847 [wrapper] Pilot exit status: 0
2025-04-27 08:15:14 (56020): Guest Log: 2025-04-27 06:14:53,858 [wrapper] pandaids: 6617457085
2025-04-27 08:15:14 (56020): Guest Log: 2025-04-27 06:14:53,869 [wrapper] cleanup supervisor_pilot  2568 5773
2025-04-27 08:15:14 (56020): Guest Log: 2025-04-27 06:14:53,871 [wrapper] Test setup, not cleaning
2025-04-27 08:15:14 (56020): Guest Log: 2025-04-27 06:14:53,872 [wrapper] apfmon messages muted
2025-04-27 08:15:14 (56020): Guest Log: 2025-04-27 06:14:53,874 [wrapper] ==== wrapper stdout END ====
2025-04-27 08:15:14 (56020): Guest Log: 2025-04-27 06:14:53,875 [wrapper] ==== wrapper stderr END ====
2025-04-27 08:15:14 (56020): Guest Log:  *** Error codes and diagnostics ***
2025-04-27 08:15:14 (56020): Guest Log:     "exeErrorCode": 0,
2025-04-27 08:15:14 (56020): Guest Log:     "exeErrorDiag": "",
2025-04-27 08:15:14 (56020): Guest Log:     "pilotErrorCode": 0,
2025-04-27 08:15:14 (56020): Guest Log:     "pilotErrorDiag": "",
2025-04-27 08:15:14 (56020): Guest Log:  *** Listing of results directory ***
2025-04-27 08:15:14 (56020): Guest Log: total 204828
2025-04-27 08:15:14 (56020): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 26 10:36 pilot3.tar.gz
2025-04-27 08:15:14 (56020): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 26 10:39 queuedata.json
2025-04-27 08:15:14 (56020): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 26 10:39 runpilot2-wrapper.sh
2025-04-27 08:15:14 (56020): Guest Log: -rwxr-xr-x. 1 atlas atlas      9353 Apr 26 22:30 init_data.xml
2025-04-27 08:15:14 (56020): Guest Log: -rwxr-xr-x. 1 atlas atlas    508871 Apr 26 22:30 input.tar.gz
2025-04-27 08:15:14 (56020): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr 26 22:30 start_atlas.sh
2025-04-27 08:15:14 (56020): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 26 22:30 EVNT.44292255._000325.pool.root.1 -> /data/./ATLAS.root_0
2025-04-27 08:15:14 (56020): Guest Log: -rw-r--r--. 1 atlas atlas      2548 Apr 26 22:30 pandaJob.out
2025-04-27 08:15:14 (56020): Guest Log: -rw-------. 1 atlas atlas       460 Apr 26 22:30 setup.sh.local
2025-04-27 08:15:14 (56020): Guest Log: -rw-------. 1 atlas atlas    993200 Apr 26 22:30 agis_schedconf.cvmfs.json
2025-04-27 08:15:14 (56020): Guest Log: drwx------. 4 atlas atlas      4096 Apr 26 22:30 pilot3
2025-04-27 08:15:14 (56020): Guest Log: -rw-------. 1 atlas atlas        95 Apr 27 06:14 pilot_heartbeat.json
2025-04-27 08:15:14 (56020): Guest Log: -rw-------. 1 atlas atlas 199944062 Apr 27 06:14 HITS.44292257._008133.pool.root.1
2025-04-27 08:15:14 (56020): Guest Log: -rw-------. 1 atlas atlas      1023 Apr 27 06:14 memory_monitor_summary.json
2025-04-27 08:15:14 (56020): Guest Log: -rw-------. 1 atlas atlas   1596659 Apr 27 06:14 agis_ddmendpoints.agis.ALL.json
2025-04-27 08:15:14 (56020): Guest Log: -rw-------. 1 atlas atlas    411301 Apr 27 06:14 log.44292257._008133.job.log.tgz.1
2025-04-27 08:15:14 (56020): Guest Log: -rw-------. 1 atlas atlas      7672 Apr 27 06:14 heartbeat.json
2025-04-27 08:15:14 (56020): Guest Log: -rw-------. 1 atlas atlas      4722 Apr 27 06:14 pilotlog.txt
2025-04-27 08:15:14 (56020): Guest Log: -rw-------. 1 atlas atlas   2604293 Apr 27 06:14 log.44292257._008133.job.log.1
2025-04-27 08:15:14 (56020): Guest Log: -rw-------. 1 atlas atlas       357 Apr 27 06:14 output.list
2025-04-27 08:15:14 (56020): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 27 06:14 runtime_log
2025-04-27 08:15:14 (56020): Guest Log: -rw-------. 1 atlas atlas   3031040 Apr 27 06:14 result.tar.gz
2025-04-27 08:15:14 (56020): Guest Log: -rw-r--r--. 1 atlas atlas     11174 Apr 27 06:14 runtime_log.err
2025-04-27 08:15:14 (56020): Guest Log: -rw-------. 1 atlas atlas       657 Apr 27 06:14 KEELDmz7rS7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmCcALDmIcAiTn.diag
2025-04-27 08:15:14 (56020): Guest Log: Looking for outputfile HITS.44292257._008133.pool.root.1
2025-04-27 08:15:14 (56020): Guest Log: HITS file was successfully produced
2025-04-27 08:15:14 (56020): Guest Log: -rw-------. 1 atlas atlas 199944062 Apr 27 06:14 /home/atlas/RunAtlas/HITS.44292257._008133.pool.root.1
2025-04-27 08:15:14 (56020): Guest Log: Successfully finished the ATLAS job!
2025-04-27 08:15:14 (56020): Guest Log: Copying the results back to the shared directory!
2025-04-27 08:15:14 (56020): Guest Log:  *** Contents of shared directory: ***
2025-04-27 08:15:14 (56020): Guest Log: total 416464
2025-04-27 08:15:14 (56020): Guest Log: -rwxrwxrwx. 1 root root 222936287 Apr 26 22:29 ATLAS.root_0
2025-04-27 08:15:14 (56020): Guest Log: -rwxrwxrwx. 1 root root 199944062 Apr 27  2025 HITS.pool.root.1
2025-04-27 08:15:14 (56020): Guest Log: -rwxrwxrwx. 1 root root      9353 Apr 26 22:29 init_data.xml
2025-04-27 08:15:14 (56020): Guest Log: -rwxrwxrwx. 1 root root    508871 Apr 26 22:29 input.tar.gz
2025-04-27 08:15:14 (56020): Guest Log: -rwxrwxrwx. 1 root root   3031040 Apr 27  2025 result.tar.gz
2025-04-27 08:15:14 (56020): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 26 22:29 start_atlas.sh
2025-04-27 08:15:14 (56020): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-27 08:15:14 (56020): VM Completion File Detected.
2025-04-27 08:15:14 (56020): Powering off VM.
2025-04-27 08:15:15 (56020): Successfully stopped VM.
2025-04-27 08:15:15 (56020): Deregistering VM. (boinc_f92abfe1238efde9, slot#9)
2025-04-27 08:15:15 (56020): Removing network bandwidth throttle group from VM.
2025-04-27 08:15:15 (56020): Removing VM from VirtualBox.
08:15:20 (56020): called boinc_finish(0)

</stderr_txt>
]]>

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