Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-26 16:17:50 (5804): Detected: vboxwrapper 26206
2025-04-26 16:17:50 (5804): Detected: BOINC client v8.0.4
2025-04-26 16:17:51 (5804): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-04-26 16:17:51 (5804): Successfully copied 'init_data.xml' to the shared directory.
2025-04-26 16:17:52 (5804): Create VM. (boinc_5ad35d3a37eb49b3, slot#2)
2025-04-26 16:17:52 (5804): Setting Memory Size for VM. (4400MB)
2025-04-26 16:17:52 (5804): Setting CPU Count for VM. (4)
2025-04-26 16:17:53 (5804): Setting Chipset Options for VM.
2025-04-26 16:17:53 (5804): Setting Graphics Controller Options for VM.
2025-04-26 16:17:53 (5804): Setting Boot Options for VM.
2025-04-26 16:17:53 (5804): Setting Network Configuration for NAT.
2025-04-26 16:17:54 (5804): Enabling VM Network Access.
2025-04-26 16:17:54 (5804): Disabling USB Support for VM.
2025-04-26 16:17:54 (5804): Disabling COM Port Support for VM.
2025-04-26 16:17:55 (5804): Disabling LPT Port Support for VM.
2025-04-26 16:17:55 (5804): Disabling Audio Support for VM.
2025-04-26 16:17:55 (5804): Disabling Clipboard Support for VM.
2025-04-26 16:17:55 (5804): Disabling Drag and Drop Support for VM.
2025-04-26 16:17:56 (5804): Adding storage controller(s) to VM.
2025-04-26 16:17:56 (5804): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-26 16:17:56 (5804): Adding VirtualBox Guest Additions to VM.
2025-04-26 16:17:57 (5804): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-26 16:17:57 (5804): forwarding host port 50850 to guest port 80
2025-04-26 16:17:57 (5804): Enabling remote desktop for VM.
2025-04-26 16:17:57 (5804): Required extension pack not installed, remote desktop not enabled.
2025-04-26 16:17:57 (5804): Enabling shared directory for VM.
2025-04-26 16:17:58 (5804): Starting VM using VBoxManage interface. (boinc_5ad35d3a37eb49b3, slot#2)
2025-04-26 16:18:03 (5804): Successfully started VM. (PID = '1544')
2025-04-26 16:18:03 (5804): Reporting VM Process ID to BOINC.
2025-04-26 16:18:03 (5804): Guest Log: BIOS: VirtualBox 7.0.6
2025-04-26 16:18:03 (5804): Guest Log: CPUID EDX: 0x178bfbff
2025-04-26 16:18:03 (5804): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-26 16:18:03 (5804): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-26 16:18:03 (5804): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-26 16:18:03 (5804): Detected: Web Application Enabled (http://localhost:50850)
2025-04-26 16:18:03 (5804): Preference change detected
2025-04-26 16:18:03 (5804): Setting CPU throttle for VM. (80%)
2025-04-26 16:18:03 (5804): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-26 16:18:05 (5804): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-26 16:18:05 (5804): Guest Log: BIOS: Booting from Hard Disk...
2025-04-26 16:18:08 (5804): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-26 16:18:08 (5804): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-26 16:18:08 (5804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-26 16:18:08 (5804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-26 16:18:08 (5804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-26 16:18:08 (5804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-26 16:18:08 (5804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-26 16:18:08 (5804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-26 16:18:08 (5804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-26 16:18:08 (5804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-26 16:18:08 (5804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-26 16:18:08 (5804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-26 16:18:08 (5804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-26 16:18:08 (5804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-26 16:18:08 (5804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-26 16:18:08 (5804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-26 16:18:08 (5804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-26 16:18:08 (5804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-26 16:18:08 (5804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-26 16:18:08 (5804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-26 16:18:08 (5804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-26 16:18:08 (5804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-26 16:18:08 (5804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-26 16:18:08 (5804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-26 16:18:08 (5804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-26 16:18:08 (5804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-26 16:18:08 (5804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-26 16:18:08 (5804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-26 16:18:08 (5804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-26 16:18:08 (5804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-26 16:18:08 (5804): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-26 16:18:08 (5804): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-26 16:18:17 (5804): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-26 16:18:17 (5804): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-26 16:18:31 (5804): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-26 16:18:31 (5804): Guest Log: 00:00:00.000499 main     Log opened 2025-04-26T16:18:29.415491000Z
2025-04-26 16:18:31 (5804): Guest Log: 00:00:00.000625 main     OS Product: Linux
2025-04-26 16:18:31 (5804): Guest Log: 00:00:00.000665 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-26 16:18:31 (5804): Guest Log: 00:00:00.000695 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-26 16:18:31 (5804): Guest Log: 00:00:00.000725 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-26 16:18:31 (5804): Guest Log: 00:00:00.000726 main     Process ID: 1302
2025-04-26 16:18:31 (5804): Guest Log: 00:00:00.000726 main     Package type: LINUX_64BITS_GENERIC
2025-04-26 16:18:31 (5804): Guest Log: 00:00:00.040214 main     5.2.32 r132073 started. Verbose level = 0
2025-04-26 16:18:31 (5804): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-26 16:18:31 (5804): Guest Log: [INFO] Mounting shared directory
2025-04-26 16:18:31 (5804): Guest Log: [INFO] Checking for init_data.xml
2025-04-26 16:18:35 (5804): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-26 16:18:35 (5804): Guest Log: [INFO] Detected branch: prod
2025-04-26 16:18:35 (5804): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-26 16:18:35 (5804): Guest Log: Copying input files
2025-04-26 16:18:37 (5804): Guest Log: Copied input files into RunAtlas.
2025-04-26 16:18:37 (5804): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-26 16:18:37 (5804): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-26 16:18:37 (5804): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-26 16:18:37 (5804): Guest Log: Further information can be found at the LHC@home message board.
2025-04-26 16:18:41 (5804): Guest Log: 00:00:10.064247 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 137 064 000ns (GuestNow=1 745 698 720 596 621 000 ns GuestLast=1 745 684 309 459 557 000 ns fSetTimeLastLoop=true )
2025-04-26 16:18:46 (5804): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-26 16:18:46 (5804): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-26 16:18:46 (5804): Guest Log: 2.6.3.0 1581 0 30140 145314 3 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-26 16:18:50 (5804): Guest Log: copied the webapp to /var/www
2025-04-26 16:18:50 (5804): Guest Log: ATHENA_PROC_NUMBER=4
2025-04-26 16:18:50 (5804): Guest Log: ATHENA_CORE_NUMBER=4
2025-04-26 16:18:50 (5804): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-26 16:18:50 (5804): Guest Log:  *** Starting ATLAS job. (PandaID=6617460416 taskID=44292257) ***
2025-04-26 16:31:31 (5804): Guest Log:  *** Job finished ***
2025-04-26 16:31:31 (5804): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-26 16:31:31 (5804): Guest Log: 2025-04-26 20:31:21,794 | INFO     | [data] copytool_out thread has finished
2025-04-26 16:31:31 (5804): Guest Log: 2025-04-26 20:31:22,291 | INFO     | [job] queue monitor thread has finished
2025-04-26 16:31:31 (5804): Guest Log: 2025-04-26 20:31:23,188 | INFO     | [data] queue_monitor thread has finished
2025-04-26 16:31:31 (5804): Guest Log: 2025-04-26 20:31:23,653 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139738011522880)>', '<ExcThread(monitor, started 139736685471488)>']
2025-04-26 16:31:31 (5804): Guest Log: 2025-04-26 20:31:24,485 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-26 16:31:31 (5804): Guest Log: 2025-04-26 20:31:24,485 | INFO     | [monitor] control thread has ended
2025-04-26 16:31:31 (5804): Guest Log: 2025-04-26 20:31:28,779 | INFO     | all workflow threads have been joined
2025-04-26 16:31:31 (5804): Guest Log: 2025-04-26 20:31:28,779 | INFO     | end of generic workflow (traces error code: 0)
2025-04-26 16:31:31 (5804): Guest Log: 2025-04-26 20:31:28,779 | INFO     | traces error code: 0
2025-04-26 16:31:31 (5804): Guest Log: 2025-04-26 20:31:28,779 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-26 16:31:31 (5804): Guest Log: 2025-04-26 20:31:28,939 [wrapper] ==== pilot stdout END ====
2025-04-26 16:31:31 (5804): Guest Log: 2025-04-26 20:31:28,976 [wrapper] ==== wrapper stdout RESUME ====
2025-04-26 16:31:31 (5804): Guest Log: 2025-04-26 20:31:29,046 [wrapper] pilotpid: 5919
2025-04-26 16:31:31 (5804): Guest Log: 2025-04-26 20:31:29,096 [wrapper] Pilot exit status: 0
2025-04-26 16:31:31 (5804): Guest Log: 2025-04-26 20:31:29,333 [wrapper] pandaids: 6617460416
2025-04-26 16:31:31 (5804): Guest Log: 2025-04-26 20:31:29,452 [wrapper] cleanup supervisor_pilot  5925 5920
2025-04-26 16:31:31 (5804): Guest Log: 2025-04-26 20:31:29,501 [wrapper] Test setup, not cleaning
2025-04-26 16:31:31 (5804): Guest Log: 2025-04-26 20:31:29,515 [wrapper] apfmon messages muted
2025-04-26 16:31:31 (5804): Guest Log: 2025-04-26 20:31:29,566 [wrapper] ==== wrapper stdout END ====
2025-04-26 16:31:31 (5804): Guest Log: 2025-04-26 20:31:29,594 [wrapper] ==== wrapper stderr END ====
2025-04-26 16:31:31 (5804): Guest Log:  *** Error codes and diagnostics ***
2025-04-26 16:31:31 (5804): Guest Log:     "exeErrorCode": 65,
2025-04-26 16:31:31 (5804): Guest Log:     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1); Logfile error in log.EVNTtoHITS: \"ServiceManager      FATAL No Service factory for Geo2G4Svc available.\"",
2025-04-26 16:31:31 (5804): Guest Log:     "pilotErrorCode": 1305,
2025-04-26 16:31:31 (5804): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1); Logfile error in log.EVNTtoHITS: \"ServiceManager      FATAL No Service factory for Geo2G4Svc available.\"",
2025-04-26 16:31:31 (5804): Guest Log:  *** Listing of results directory ***
2025-04-26 16:31:31 (5804): Guest Log: total 3972
2025-04-26 16:31:31 (5804): Guest Log: -rw-r--r--. 1 atlas atlas  495897 Apr 26 12:36 pilot3.tar.gz
2025-04-26 16:31:31 (5804): Guest Log: -rw-r--r--. 1 atlas atlas    5111 Apr 26 12:50 queuedata.json
2025-04-26 16:31:31 (5804): Guest Log: -rwx------. 1 atlas atlas   37140 Apr 26 12:51 runpilot2-wrapper.sh
2025-04-26 16:31:31 (5804): Guest Log: -rwxr-xr-x. 1 atlas atlas   11034 Apr 26 20:18 init_data.xml
2025-04-26 16:31:31 (5804): Guest Log: -rwxr-xr-x. 1 atlas atlas  508881 Apr 26 20:18 input.tar.gz
2025-04-26 16:31:31 (5804): Guest Log: -rwxr-xr-x. 1 atlas atlas   17569 Apr 26 20:18 start_atlas.sh
2025-04-26 16:31:31 (5804): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Apr 26 20:18 EVNT.44292255._000374.pool.root.1 -> /data/./ATLAS.root_0
2025-04-26 16:31:31 (5804): Guest Log: -rw-r--r--. 1 atlas atlas    2548 Apr 26 20:18 pandaJob.out
2025-04-26 16:31:31 (5804): Guest Log: -rw-------. 1 atlas atlas     424 Apr 26 20:18 setup.sh.local
2025-04-26 16:31:31 (5804): Guest Log: -rw-------. 1 atlas atlas  993216 Apr 26 20:20 agis_schedconf.cvmfs.json
2025-04-26 16:31:31 (5804): Guest Log: -rw-------. 1 atlas atlas 1596659 Apr 26 20:20 agis_ddmendpoints.agis.ALL.json
2025-04-26 16:31:31 (5804): Guest Log: drwx------. 4 atlas atlas    4096 Apr 26 20:20 pilot3
2025-04-26 16:31:31 (5804): Guest Log: -rw-------. 1 atlas atlas    1005 Apr 26 20:28 memory_monitor_summary.json
2025-04-26 16:31:31 (5804): Guest Log: -rw-------. 1 atlas atlas   42498 Apr 26 20:28 log.44292257._009352.job.log.tgz.1
2025-04-26 16:31:31 (5804): Guest Log: -rw-------. 1 atlas atlas      95 Apr 26 20:30 pilot_heartbeat.json
2025-04-26 16:31:31 (5804): Guest Log: -rw-------. 1 atlas atlas    9863 Apr 26 20:31 heartbeat.json
2025-04-26 16:31:31 (5804): Guest Log: -rw-------. 1 atlas atlas    4536 Apr 26 20:31 pilotlog.txt
2025-04-26 16:31:31 (5804): Guest Log: -rw-------. 1 atlas atlas  104913 Apr 26 20:31 log.44292257._009352.job.log.1
2025-04-26 16:31:31 (5804): Guest Log: -rw-------. 1 atlas atlas     188 Apr 26 20:31 output.list
2025-04-26 16:31:31 (5804): Guest Log: -rw-r--r--. 1 atlas atlas     620 Apr 26 20:31 runtime_log
2025-04-26 16:31:31 (5804): Guest Log: -rw-------. 1 atlas atlas  163840 Apr 26 20:31 result.tar.gz
2025-04-26 16:31:31 (5804): Guest Log: -rw-r--r--. 1 atlas atlas   10752 Apr 26 20:31 runtime_log.err
2025-04-26 16:31:31 (5804): Guest Log: -rw-------. 1 atlas atlas     631 Apr 26 20:31 L1BNDm6AuS7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmbXqLDmvBssVm.diag
2025-04-26 16:31:31 (5804): Guest Log: Looking for outputfile HITS.44292257._009352.pool.root.1
2025-04-26 16:31:31 (5804): Guest Log: No HITS file was produced
2025-04-26 16:31:31 (5804): Guest Log: Successfully finished the ATLAS job!
2025-04-26 16:31:31 (5804): Guest Log: Copying the results back to the shared directory!
2025-04-26 16:31:31 (5804): Guest Log:  *** Contents of shared directory: ***
2025-04-26 16:31:32 (5804): Guest Log: total 219584
2025-04-26 16:31:32 (5804): Guest Log: -rwxrwxrwx. 1 root root 224143933 Apr 26 20:17 ATLAS.root_0
2025-04-26 16:31:32 (5804): Guest Log: -rwxrwxrwx. 1 root root     11034 Apr 26 20:17 init_data.xml
2025-04-26 16:31:32 (5804): Guest Log: -rwxrwxrwx. 1 root root    508881 Apr 26 20:17 input.tar.gz
2025-04-26 16:31:32 (5804): Guest Log: -rwxrwxrwx. 1 root root    163840 Apr 26 20:31 result.tar.gz
2025-04-26 16:31:32 (5804): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 26 20:17 start_atlas.sh
2025-04-26 16:31:32 (5804): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-26 16:31:32 (5804): VM Completion File Detected.
2025-04-26 16:31:32 (5804): Powering off VM.
2025-04-26 16:31:33 (5804): Successfully stopped VM.
2025-04-26 16:31:33 (5804): Deregistering VM. (boinc_5ad35d3a37eb49b3, slot#2)
2025-04-26 16:31:33 (5804): Removing network bandwidth throttle group from VM.
2025-04-26 16:31:33 (5804): Removing VM from VirtualBox.
16:31:39 (5804): called boinc_finish(0)

</stderr_txt>
]]>

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