Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:37:20 (39560): wrapper (7.7.26015): starting
15:37:20 (39560): wrapper: running run_atlas (--nthreads 8)
[2025-04-26 15:37:21] Arguments: --nthreads 8
[2025-04-26 15:37:21] Threads: 8
[2025-04-26 15:37:21] Checking for CVMFS
[2025-04-26 15:37:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-26 15:37:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-26 15:37:24] Running cvmfs_config stat atlas.cern.ch
[2025-04-26 15:37:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-26 15:37:30] 2.11.2.0 21799 37031 367620 145313 0 229 15722778 18432000 12323 130560 0 150075662 98.978 351000678 35577 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-26 15:37:30] CVMFS is ok
[2025-04-26 15:37:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-26 15:37:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-26 15:37:30] Further information can be found at the LHC@home message board.
[2025-04-26 15:37:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-26 15:37:30] Checking for apptainer binary...
[2025-04-26 15:37:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-26 15:37:30] Running /usr/bin/apptainer --version
[2025-04-26 15:37:30] apptainer version 1.3.2-1.el7
[2025-04-26 15:37:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-26 15:37:55] c-211-14.aglt2.org
[2025-04-26 15:37:55] apptainer works
[2025-04-26 15:37:56] Set ATHENA_PROC_NUMBER=8
[2025-04-26 15:37:56] Set ATHENA_CORE_NUMBER=8
[2025-04-26 15:37:56] Starting ATLAS job with PandaID=6617464088
[2025-04-26 15:37:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-27 12:55:00]  *** The last 200 lines of the pilot log: ***
[2025-04-27 12:55:00] 2025-04-27 16:54:27,060 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-27 12:55:00] 2025-04-27 16:54:29,564 | INFO     | monitor loop #3502: job 0:6617464088 is in state 'finished'
[2025-04-27 12:55:00] 2025-04-27 16:54:29,565 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-27 12:55:00] 2025-04-27 16:54:32,069 | INFO     | monitor loop #3503: job 0:6617464088 is in state 'finished'
[2025-04-27 12:55:00] 2025-04-27 16:54:32,070 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-27 12:55:00] 2025-04-27 16:54:34,574 | INFO     | monitor loop #3504: job 0:6617464088 is in state 'finished'
[2025-04-27 12:55:00] 2025-04-27 16:54:34,575 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-27 12:55:00] 2025-04-27 16:54:37,079 | INFO     | monitor loop #3505: job 0:6617464088 is in state 'finished'
[2025-04-27 12:55:00] 2025-04-27 16:54:37,079 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-27 12:55:00] 2025-04-27 16:54:39,584 | INFO     | monitor loop #3506: job 0:6617464088 is in state 'finished'
[2025-04-27 12:55:00] 2025-04-27 16:54:39,584 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-27 12:55:00] 2025-04-27 16:54:42,088 | INFO     | monitor loop #3507: job 0:6617464088 is in state 'finished'
[2025-04-27 12:55:00] 2025-04-27 16:54:42,088 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-27 12:55:00] 2025-04-27 16:54:44,240 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-27 12:55:00] 2025-04-27 16:54:44,242 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6617464088/memory_monitor_summary.json (trf name=prmon)
[2025-04-27 12:55:00] 2025-04-27 16:54:44,243 | INFO     | extracted standard info from prmon json
[2025-04-27 12:55:00] 2025-04-27 16:54:44,243 | INFO     | extracted standard memory fields from prmon json
[2025-04-27 12:55:00] 2025-04-27 16:54:44,243 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-27 12:55:00] 2025-04-27 16:54:44,244 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-27 12:55:00] 2025-04-27 16:54:44,244 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-27 12:55:00] 2025-04-27 16:54:44,310 | INFO     | fitting pss+swap vs Time
[2025-04-27 12:55:00] 2025-04-27 16:54:44,312 | INFO     | sum of square deviations: 592630638715.4553
[2025-04-27 12:55:00] 2025-04-27 16:54:44,373 | INFO     | sum of deviations: 3870135008025.476
[2025-04-27 12:55:00] 2025-04-27 16:54:44,374 | INFO     | mean x: 1745734994.0209508
[2025-04-27 12:55:00] 2025-04-27 16:54:44,374 | INFO     | mean y: 2404941.6357775987
[2025-04-27 12:55:00] 2025-04-27 16:54:44,374 | INFO     | -- intersect: -11398001439.20872
[2025-04-27 12:55:00] 2025-04-27 16:54:44,374 | INFO     | intersect: -11398001439.20872
[2025-04-27 12:55:00] 2025-04-27 16:54:44,376 | INFO     | chi2: 25.826220485623242
[2025-04-27 12:55:00] 2025-04-27 16:54:44,379 | INFO     | sum of square deviations: 585496547190.2219
[2025-04-27 12:55:00] 2025-04-27 16:54:44,434 | INFO     | sum of deviations: 3932985325861.0264
[2025-04-27 12:55:00] 2025-04-27 16:54:44,434 | INFO     | mean x: 1745734841.525081
[2025-04-27 12:55:00] 2025-04-27 16:54:44,434 | INFO     | mean y: 2406279.289644013
[2025-04-27 12:55:00] 2025-04-27 16:54:44,434 | INFO     | -- intersect: -11724305940.46968
[2025-04-27 12:55:00] 2025-04-27 16:54:44,434 | INFO     | intersect: -11724305940.46968
[2025-04-27 12:55:00] 2025-04-27 16:54:44,436 | INFO     | chi2: 25.080493887617255
[2025-04-27 12:55:00] 2025-04-27 16:54:44,437 | INFO     | current chi2=25.080493887617255 (change=2.887478632117747 %)
[2025-04-27 12:55:00] 2025-04-27 16:54:44,437 | INFO     | right removable region: 1235
[2025-04-27 12:55:00] 2025-04-27 16:54:44,439 | INFO     | sum of square deviations: 585495774320.2233
[2025-04-27 12:55:00] 2025-04-27 16:54:44,493 | INFO     | sum of deviations: 3427573195094.5645
[2025-04-27 12:55:00] 2025-04-27 16:54:44,494 | INFO     | mean x: 1745735146.525081
[2025-04-27 12:55:00] 2025-04-27 16:54:44,494 | INFO     | mean y: 2414400.5784789645
[2025-04-27 12:55:00] 2025-04-27 16:54:44,494 | INFO     | -- intersect: -10217360457.593664
[2025-04-27 12:55:00] 2025-04-27 16:54:44,494 | INFO     | intersect: -10217360457.593664
[2025-04-27 12:55:00] 2025-04-27 16:54:44,497 | INFO     | chi2: 20.59545941732637
[2025-04-27 12:55:00] 2025-04-27 16:54:44,497 | INFO     | current chi2=20.59545941732637 (change=20.253683930285867 %)
[2025-04-27 12:55:00] 2025-04-27 16:54:44,497 | INFO     | left removable region: 10
[2025-04-27 12:55:00] 2025-04-27 16:54:44,500 | INFO     | sum of square deviations: 570002035510.5599
[2025-04-27 12:55:00] 2025-04-27 16:54:44,543 | INFO     | sum of deviations: 3090587513923.861
[2025-04-27 12:55:00] 2025-04-27 16:54:44,544 | INFO     | mean x: 1745735116.0342858
[2025-04-27 12:55:00] 2025-04-27 16:54:44,544 | INFO     | mean y: 2424345.288979592
[2025-04-27 12:55:00] 2025-04-27 16:54:44,544 | INFO     | -- intersect: -9463063172.490297
[2025-04-27 12:55:00] 2025-04-27 16:54:44,544 | INFO     | intersect: -9463063172.490297
[2025-04-27 12:55:00] 2025-04-27 16:54:44,546 | INFO     | chi2: 15.70670043642776
[2025-04-27 12:55:00] 2025-04-27 16:54:44,547 | INFO     | -- intersect: -9463063172.490297
[2025-04-27 12:55:00] 2025-04-27 16:54:44,547 | INFO     | current memory leak: 5.42 B/s (using 1225 data points, chi2=15.71)
[2025-04-27 12:55:00] 2025-04-27 16:54:44,549 | INFO     | ..............................
[2025-04-27 12:55:00] 2025-04-27 16:54:44,549 | INFO     | . Timing measurements:
[2025-04-27 12:55:00] 2025-04-27 16:54:44,549 | INFO     | . get job = 0 s
[2025-04-27 12:55:00] 2025-04-27 16:54:44,549 | INFO     | . initial setup = 23 s
[2025-04-27 12:55:00] 2025-04-27 16:54:44,550 | INFO     | . payload setup = 208 s
[2025-04-27 12:55:00] 2025-04-27 16:54:44,550 | INFO     | . stage-in = 2 s
[2025-04-27 12:55:00] 2025-04-27 16:54:44,550 | INFO     | . payload execution = 75873 s
[2025-04-27 12:55:00] 2025-04-27 16:54:44,550 | INFO     | . stage-out = 4 s
[2025-04-27 12:55:00] 2025-04-27 16:54:44,550 | INFO     | . log creation = 0 s
[2025-04-27 12:55:00] 2025-04-27 16:54:44,550 | INFO     | ..............................
[2025-04-27 12:55:00] 2025-04-27 16:54:45,131 | INFO     | 
[2025-04-27 12:55:00] 2025-04-27 16:54:45,132 | INFO     | job summary report
[2025-04-27 12:55:00] 2025-04-27 16:54:45,132 | INFO     | --------------------------------------------------
[2025-04-27 12:55:00] 2025-04-27 16:54:45,132 | INFO     | PanDA job id: 6617464088
[2025-04-27 12:55:00] 2025-04-27 16:54:45,132 | INFO     | task id: 44292257
[2025-04-27 12:55:00] 2025-04-27 16:54:45,132 | INFO     | errors: (none)
[2025-04-27 12:55:00] 2025-04-27 16:54:45,132 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-27 12:55:00] 2025-04-27 16:54:45,132 | INFO     | pilot state: finished 
[2025-04-27 12:55:00] 2025-04-27 16:54:45,132 | INFO     | transexitcode: 0
[2025-04-27 12:55:00] 2025-04-27 16:54:45,133 | INFO     | exeerrorcode: 0
[2025-04-27 12:55:00] 2025-04-27 16:54:45,133 | INFO     | exeerrordiag: 
[2025-04-27 12:55:00] 2025-04-27 16:54:45,133 | INFO     | exitcode: 0
[2025-04-27 12:55:00] 2025-04-27 16:54:45,133 | INFO     | exitmsg: OK
[2025-04-27 12:55:00] 2025-04-27 16:54:45,162 | INFO     | cpuconsumptiontime: 70017 s
[2025-04-27 12:55:00] 2025-04-27 16:54:45,162 | INFO     | nevents: 400
[2025-04-27 12:55:00] 2025-04-27 16:54:45,162 | INFO     | neventsw: 0
[2025-04-27 12:55:00] 2025-04-27 16:54:45,163 | INFO     | pid: 12468
[2025-04-27 12:55:00] 2025-04-27 16:54:45,163 | INFO     | pgrp: 12468
[2025-04-27 12:55:00] 2025-04-27 16:54:45,163 | INFO     | corecount: 8
[2025-04-27 12:55:00] 2025-04-27 16:54:45,163 | INFO     | event service: False
[2025-04-27 12:55:00] 2025-04-27 16:54:45,163 | INFO     | sizes: {0: 2393500, 1: 2393584, 3: 2393584, 4: 2393783, 5: 2393811, 17: 2393867, 28: 2394023, 40: 2394051, 52: 2394079, 63: 2394107, 75: 2394135, 87: 2394443, 99: 
[2025-04-27 12:55:00] 2025-04-27 16:54:45,163 | INFO     | --------------------------------------------------
[2025-04-27 12:55:00] 2025-04-27 16:54:45,163 | INFO     | 
[2025-04-27 12:55:00] 2025-04-27 16:54:45,163 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-04-27 12:55:00] 2025-04-27 16:54:45,284 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-27 12:55:00] 2025-04-27 16:54:45,284 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-27 12:55:00] 2025-04-27 16:54:45,284 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-27 12:55:00] 2025-04-27 16:54:45,284 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-27 12:55:00] 2025-04-27 16:54:45,284 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-27 12:55:00] 2025-04-27 16:54:45,284 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-27 12:55:00] 2025-04-27 16:54:45,285 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-27 12:55:00] 2025-04-27 16:54:45,285 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-27 12:55:00] 2025-04-27 16:54:45,285 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-27 12:55:00] 2025-04-27 16:54:45,285 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-27 12:55:00] 2025-04-27 16:54:45,285 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-27 12:55:00] 2025-04-27 16:54:45,285 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-27 12:55:00] 2025-04-27 16:54:45,312 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-27 12:55:00] 2025-04-27 16:54:45,313 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-27 12:55:00] 2025-04-27 16:54:45,313 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-27 12:55:00] 2025-04-27 16:54:45,313 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-27 12:55:00] 2025-04-27 16:54:45,313 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-27 12:55:00] 2025-04-27 16:54:45,313 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-27 12:55:00] 2025-04-27 16:54:45,313 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-27 12:55:00] 2025-04-27 16:54:45,313 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-27 12:55:00] 2025-04-27 16:54:45,314 | INFO     | job 6617464088 has completed (purged errors)
[2025-04-27 12:55:00] 2025-04-27 16:54:45,314 | INFO     | overall cleanup function is called
[2025-04-27 12:55:00] 2025-04-27 16:54:45,535 | INFO     | PID=40176 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-27 12:55:00] 2025-04-27 16:54:45,535 | INFO     | .. there are 26 such processes running
[2025-04-27 12:55:00] 2025-04-27 16:54:46,324 | INFO     | --- collectZombieJob: --- 10, [12468]
[2025-04-27 12:55:00] 2025-04-27 16:54:46,325 | INFO     | zombie collector waiting for pid 12468
[2025-04-27 12:55:00] 2025-04-27 16:54:46,325 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-27 12:55:00] 2025-04-27 16:54:46,325 | INFO     | collected zombie processes
[2025-04-27 12:55:00] 2025-04-27 16:54:46,325 | INFO     | will attempt to kill all subprocesses of pid=12468
[2025-04-27 12:55:00] 2025-04-27 16:54:46,865 | INFO     | process IDs to be killed: [12468] (in reverse order)
[2025-04-27 12:55:00] 2025-04-27 16:54:47,024 | WARNING  | found no corresponding commands to process id(s)
[2025-04-27 12:55:00] 2025-04-27 16:54:47,025 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-27 12:55:00] 2025-04-27 16:54:47,038 | INFO     | did not find any defunct processes belonging to 12468
[2025-04-27 12:55:00] 2025-04-27 16:54:47,052 | INFO     | did not find any defunct processes belonging to 12468
[2025-04-27 12:55:00] 2025-04-27 16:54:47,052 | INFO     | ready for new job
[2025-04-27 12:55:00] 2025-04-27 16:54:47,052 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-27 12:55:00] 2025-04-27 16:54:47,058 | INFO     | **************************************
[2025-04-27 12:55:00] 2025-04-27 16:54:47,058 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-27 12:55:00] 2025-04-27 16:54:47,058 | INFO     | **************************************
[2025-04-27 12:55:00] 2025-04-27 16:54:47,058 | INFO     | 
[2025-04-27 12:55:00] 2025-04-27 16:54:47,061 | INFO     | architecture information:
[2025-04-27 12:55:00] 2025-04-27 16:54:47,062 | INFO     | executing command: cat /etc/os-release
[2025-04-27 12:55:00] 2025-04-27 16:54:47,082 | INFO     | cat /etc/os-release:
[2025-04-27 12:55:00] NAME="CentOS Linux"
[2025-04-27 12:55:00] VERSION="7 (Core)"
[2025-04-27 12:55:00] ID="centos"
[2025-04-27 12:55:00] ID_LIKE="rhel fedora"
[2025-04-27 12:55:00] VERSION_ID="7"
[2025-04-27 12:55:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-27 12:55:00] ANSI_COLOR="0;31"
[2025-04-27 12:55:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-27 12:55:00] HOME_URL="https://www.centos.org/"
[2025-04-27 12:55:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-27 12:55:00] 
[2025-04-27 12:55:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-27 12:55:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-27 12:55:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-27 12:55:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-27 12:55:00] 
[2025-04-27 12:55:00] 2025-04-27 16:54:47,082 | INFO     | **************************************
[2025-04-27 12:55:00] 2025-04-27 16:54:47,585 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-04-27 12:55:00] 2025-04-27 16:54:47,632 | INFO     | sufficient remaining disk space (57094963200 B)
[2025-04-27 12:55:00] 2025-04-27 16:54:47,632 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-27 12:55:00] 2025-04-27 16:54:47,633 | INFO     | current server update state: UPDATING_FINAL
[2025-04-27 12:55:00] 2025-04-27 16:54:47,633 | INFO     | update_server=False
[2025-04-27 12:55:00] 2025-04-27 16:54:47,633 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-27 12:55:00] 2025-04-27 16:54:47,633 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-27 12:55:00] 2025-04-27 16:54:47,633 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-27 12:55:00] 2025-04-27 16:54:47,634 | INFO     | found 0 job(s) in 20 queues
[2025-04-27 12:55:00] 2025-04-27 16:54:47,634 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-27 12:55:00] 2025-04-27 16:54:47,634 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-27 12:55:00] 2025-04-27 16:54:47,902 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-27 12:55:00] 2025-04-27 16:54:48,115 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-27 12:55:00] 2025-04-27 16:54:48,116 | INFO     | aborting loop
[2025-04-27 12:55:00] 2025-04-27 16:54:48,496 | INFO     | all data control threads have been joined
[2025-04-27 12:55:00] 2025-04-27 16:54:48,597 | INFO     | all job control threads have been joined
[2025-04-27 12:55:00] 2025-04-27 16:54:48,637 | INFO     | [job] retrieve thread has finished
[2025-04-27 12:55:00] 2025-04-27 16:54:48,944 | INFO     | all payload control threads have been joined
[2025-04-27 12:55:00] 2025-04-27 16:54:49,092 | INFO     | [job] validate thread has finished
[2025-04-27 12:55:00] 2025-04-27 16:54:49,104 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-27 12:55:00] 2025-04-27 16:54:49,121 | INFO     | [job] job monitor thread has finished
[2025-04-27 12:55:00] 2025-04-27 16:54:49,503 | INFO     | [data] control thread has finished
[2025-04-27 12:55:00] 2025-04-27 16:54:49,578 | INFO     | [payload] execute_payloads thread has finished
[2025-04-27 12:55:00] 2025-04-27 16:54:49,585 | INFO     | [payload] validate_pre thread has finished
[2025-04-27 12:55:00] 2025-04-27 16:54:49,591 | INFO     | [job] create_data_payload thread has finished
[2025-04-27 12:55:00] 2025-04-27 16:54:49,603 | INFO     | [job] control thread has finished
[2025-04-27 12:55:00] 2025-04-27 16:54:49,638 | INFO     | [data] copytool_out thread has finished
[2025-04-27 12:55:00] 2025-04-27 16:54:49,706 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-27 12:55:00] 2025-04-27 16:54:49,894 | INFO     | [payload] failed_post thread has finished
[2025-04-27 12:55:00] 2025-04-27 16:54:49,900 | INFO     | [payload] validate_post thread has finished
[2025-04-27 12:55:00] 2025-04-27 16:54:49,950 | INFO     | [payload] control thread has finished
[2025-04-27 12:55:00] 2025-04-27 16:54:50,091 | INFO     | [data] copytool_in thread has finished
[2025-04-27 12:55:00] 2025-04-27 16:54:50,711 | INFO     | [job] queue monitor thread has finished
[2025-04-27 12:55:00] 2025-04-27 16:54:51,910 | INFO     | [data] queue_monitor thread has finished
[2025-04-27 12:55:00] 2025-04-27 16:54:53,224 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139967095363392)>', '<ExcThread(monitor, started 139966642370304)>']
[2025-04-27 12:55:00] 2025-04-27 16:54:53,670 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-27 12:55:00] 2025-04-27 16:54:53,670 | INFO     | [monitor] control thread has ended
[2025-04-27 12:55:00] 2025-04-27 16:54:58,250 | INFO     | all workflow threads have been joined
[2025-04-27 12:55:00] 2025-04-27 16:54:58,250 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-27 12:55:00] 2025-04-27 16:54:58,251 | INFO     | traces error code: 0
[2025-04-27 12:55:00] 2025-04-27 16:54:58,251 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-27 12:55:00] 2025-04-27 16:54:58,897 [wrapper] ==== pilot stdout END ====
[2025-04-27 12:55:00] 2025-04-27 16:54:58,921 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-27 12:55:00] 2025-04-27 16:54:58,940 [wrapper] pilotpid: 40176
[2025-04-27 12:55:00] 2025-04-27 16:54:58,961 [wrapper] Pilot exit status: 0
[2025-04-27 12:55:00] 2025-04-27 16:54:59,061 [wrapper] pandaids: 6617464088
[2025-04-27 12:55:00] 2025-04-27 16:54:59,330 [wrapper] cleanup supervisor_pilot 17425 40177
[2025-04-27 12:55:00] 2025-04-27 16:54:59,348 [wrapper] Test setup, not cleaning
[2025-04-27 12:55:00] 2025-04-27 16:54:59,359 [wrapper] apfmon messages muted
[2025-04-27 12:55:00] 2025-04-27 16:54:59,369 [wrapper] ==== wrapper stdout END ====
[2025-04-27 12:55:00] 2025-04-27 16:54:59,403 [wrapper] ==== wrapper stderr END ====
[2025-04-27 12:55:00]  *** Error codes and diagnostics ***
[2025-04-27 12:55:00]     "exeErrorCode": 0,
[2025-04-27 12:55:00]     "exeErrorDiag": "",
[2025-04-27 12:55:00]     "pilotErrorCode": 0,
[2025-04-27 12:55:00]     "pilotErrorDiag": "",
[2025-04-27 12:55:00]  *** Listing of results directory ***
[2025-04-27 12:55:00] total 236044
[2025-04-27 12:55:00] -rw-r--r-- 1 boincer umatlas    495897 Apr 26 12:05 pilot3.tar.gz
[2025-04-27 12:55:00] -rw-r--r-- 1 boincer umatlas      5111 Apr 26 12:13 queuedata.json
[2025-04-27 12:55:00] -rwx------ 1 boincer umatlas     37140 Apr 26 12:16 runpilot2-wrapper.sh
[2025-04-27 12:55:00] -rw-r--r-- 1 boincer umatlas       100 Apr 26 15:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-27 12:55:00] -rwxr-xr-x 1 boincer umatlas      7986 Apr 26 15:37 run_atlas
[2025-04-27 12:55:00] -rw-r--r-- 1 boincer umatlas       105 Apr 26 15:37 job.xml
[2025-04-27 12:55:00] -rw-r--r-- 2 boincer umatlas  28942951 Apr 26 15:37 EVNT.44292255._000725.pool.root.1
[2025-04-27 12:55:00] -rw-r--r-- 2 boincer umatlas     17569 Apr 26 15:37 start_atlas.sh
[2025-04-27 12:55:00] drwxrwx--x 2 boincer umatlas      4096 Apr 26 15:37 shared
[2025-04-27 12:55:00] -rw-r--r-- 2 boincer umatlas    508876 Apr 26 15:37 input.tar.gz
[2025-04-27 12:55:00] -rw-r--r-- 1 boincer umatlas         0 Apr 26 15:37 boinc_lockfile
[2025-04-27 12:55:00] -rw-r--r-- 1 boincer umatlas      2548 Apr 26 15:37 pandaJob.out
[2025-04-27 12:55:00] -rw------- 1 boincer umatlas       467 Apr 26 15:38 setup.sh.local
[2025-04-27 12:55:00] -rw------- 1 boincer umatlas    993192 Apr 26 15:41 agis_schedconf.cvmfs.json
[2025-04-27 12:55:00] drwx------ 4 boincer umatlas      4096 Apr 26 15:42 pilot3
[2025-04-27 12:55:00] -rw-r--r-- 1 boincer umatlas      6131 Apr 27 12:47 init_data.xml
[2025-04-27 12:55:00] -rw------- 1 boincer umatlas 197514767 Apr 27 12:53 HITS.44292257._010644.pool.root.1
[2025-04-27 12:55:00] -rw-r--r-- 1 boincer umatlas       531 Apr 27 12:53 boinc_task_state.xml
[2025-04-27 12:55:00] -rw------- 1 boincer umatlas        95 Apr 27 12:54 pilot_heartbeat.json
[2025-04-27 12:55:00] -rw------- 1 boincer umatlas      1061 Apr 27 12:54 memory_monitor_summary.json
[2025-04-27 12:55:00] -rw------- 1 boincer umatlas   1596659 Apr 27 12:54 agis_ddmendpoints.agis.ALL.json
[2025-04-27 12:55:00] -rw------- 1 boincer umatlas    814233 Apr 27 12:54 log.44292257._010644.job.log.tgz.1
[2025-04-27 12:55:00] -rw------- 1 boincer umatlas      7757 Apr 27 12:54 heartbeat.json
[2025-04-27 12:55:00] -rw-r--r-- 1 boincer umatlas        28 Apr 27 12:54 wrapper_checkpoint.txt
[2025-04-27 12:55:00] -rw-r--r-- 1 boincer umatlas      8192 Apr 27 12:54 boinc_mmap_file
[2025-04-27 12:55:00] -rw------- 1 boincer umatlas      4476 Apr 27 12:54 pilotlog.txt
[2025-04-27 12:55:00] -rw------- 1 boincer umatlas   4886646 Apr 27 12:54 log.44292257._010644.job.log.1
[2025-04-27 12:55:00] -rw------- 1 boincer umatlas       357 Apr 27 12:54 output.list
[2025-04-27 12:55:00] -rw-r--r-- 1 boincer umatlas       620 Apr 27 12:54 runtime_log
[2025-04-27 12:55:00] -rw------- 1 boincer umatlas   5724160 Apr 27 12:54 result.tar.gz
[2025-04-27 12:55:00] -rw-r--r-- 1 boincer umatlas     11419 Apr 27 12:54 runtime_log.err
[2025-04-27 12:55:00] -rw------- 1 boincer umatlas       663 Apr 27 12:54 jY2KDmYNxS7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmaqqLDmnAMCRo.diag
[2025-04-27 12:55:00] -rw-r--r-- 1 boincer umatlas     21558 Apr 27 12:55 stderr.txt
[2025-04-27 12:55:00] HITS file was successfully produced:
[2025-04-27 12:55:00] -rw------- 1 boincer umatlas 197514767 Apr 27 12:53 shared/HITS.pool.root.1
[2025-04-27 12:55:00]  *** Contents of shared directory: ***
[2025-04-27 12:55:00] total 227272
[2025-04-27 12:55:00] -rw-r--r-- 2 boincer umatlas  28942951 Apr 26 15:37 ATLAS.root_0
[2025-04-27 12:55:00] -rw-r--r-- 2 boincer umatlas     17569 Apr 26 15:37 start_atlas.sh
[2025-04-27 12:55:00] -rw-r--r-- 2 boincer umatlas    508876 Apr 26 15:37 input.tar.gz
[2025-04-27 12:55:00] -rw------- 1 boincer umatlas 197514767 Apr 27 12:53 HITS.pool.root.1
[2025-04-27 12:55:00] -rw------- 1 boincer umatlas   5724160 Apr 27 12:54 result.tar.gz
12:55:02 (39560): run_atlas exited; CPU time 73658.247351
12:55:02 (39560): called boinc_finish(0)

</stderr_txt>
]]>

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