Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:49:30 (3291312): wrapper (7.7.26015): starting
15:49:30 (3291312): wrapper: running run_atlas (--nthreads 9)
[2025-04-26 15:49:30] Arguments: --nthreads 9
[2025-04-26 15:49:30] Threads: 9
[2025-04-26 15:49:30] Checking for CVMFS
[2025-04-26 15:49:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-26 15:49:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-26 15:49:31] Running cvmfs_config stat atlas.cern.ch
[2025-04-26 15:49:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-26 15:49:32] 2.12.6.0 3326546 72883 216124 145313 2 436 20930408 32935937 15628 130560 0 85218157 99.481 116359113 29940 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-26 15:49:32] CVMFS is ok
[2025-04-26 15:49:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-26 15:49:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-26 15:49:32] Further information can be found at the LHC@home message board.
[2025-04-26 15:49:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-26 15:49:32] Checking for apptainer binary...
[2025-04-26 15:49:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-26 15:49:32] Running /usr/bin/apptainer --version
[2025-04-26 15:49:32] apptainer version 1.4.0-1.el9
[2025-04-26 15:49:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-26 15:49:33] c6-5-7-3.aglt2.org
[2025-04-26 15:49:33] apptainer works
[2025-04-26 15:49:33] Set ATHENA_PROC_NUMBER=9
[2025-04-26 15:49:33] Set ATHENA_CORE_NUMBER=9
[2025-04-26 15:49:33] Starting ATLAS job with PandaID=6617460127
[2025-04-26 15:49:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-26 21:02:11]  *** The last 200 lines of the pilot log: ***
[2025-04-26 21:02:11] 2025-04-27 01:01:52,868 | INFO     | mean y: 2432509.272425249
[2025-04-26 21:02:11] 2025-04-27 01:01:52,899 | INFO     | -- intersect: -33806291621.23167
[2025-04-26 21:02:11] 2025-04-27 01:01:52,899 | INFO     | intersect: -33806291621.23167
[2025-04-26 21:02:11] 2025-04-27 01:01:52,899 | INFO     | chi2: 2.7313624959059735
[2025-04-26 21:02:11] 2025-04-27 01:01:52,900 | INFO     | current chi2=2.7313624959059735 (change=50.732336408473145 %)
[2025-04-26 21:02:11] 2025-04-27 01:01:52,900 | INFO     | sum of square deviations: 8041642191.0134945
[2025-04-26 21:02:11] 2025-04-27 01:01:52,902 | INFO     | sum of deviations: 104720817008.88535
[2025-04-26 21:02:11] 2025-04-27 01:01:52,902 | INFO     | mean x: 1745706652.2094595
[2025-04-26 21:02:11] 2025-04-27 01:01:52,902 | INFO     | mean y: 2454233.9695945946
[2025-04-26 21:02:11] 2025-04-27 01:01:52,902 | INFO     | -- intersect: -22730691874.11169
[2025-04-26 21:02:11] 2025-04-27 01:01:52,902 | INFO     | intersect: -22730691874.11169
[2025-04-26 21:02:11] 2025-04-27 01:01:52,933 | INFO     | chi2: 1.3723444533479987
[2025-04-26 21:02:11] 2025-04-27 01:01:52,933 | INFO     | current chi2=1.3723444533479987 (change=49.756048294395214 %)
[2025-04-26 21:02:11] 2025-04-27 01:01:52,934 | INFO     | sum of square deviations: 7640900858.453586
[2025-04-26 21:02:11] 2025-04-27 01:01:52,935 | INFO     | sum of deviations: 53609546088.39174
[2025-04-26 21:02:11] 2025-04-27 01:01:52,936 | INFO     | mean x: 1745706804.7216494
[2025-04-26 21:02:11] 2025-04-27 01:01:52,936 | INFO     | mean y: 2473651.350515464
[2025-04-26 21:02:11] 2025-04-27 01:01:52,936 | INFO     | -- intersect: -12245630484.303062
[2025-04-26 21:02:11] 2025-04-27 01:01:52,936 | INFO     | intersect: -12245630484.303062
[2025-04-26 21:02:11] 2025-04-27 01:01:52,936 | INFO     | chi2: 0.29949613537063097
[2025-04-26 21:02:11] 2025-04-27 01:01:52,936 | INFO     | current chi2=0.29949613537063097 (change=78.17631465336751 %)
[2025-04-26 21:02:11] 2025-04-27 01:01:52,971 | INFO     | sum of square deviations: 7253712658.769251
[2025-04-26 21:02:11] 2025-04-27 01:01:52,973 | INFO     | sum of deviations: 28456969672.615383
[2025-04-26 21:02:11] 2025-04-27 01:01:52,973 | INFO     | mean x: 1745706957.2307692
[2025-04-26 21:02:11] 2025-04-27 01:01:52,973 | INFO     | mean y: 2483545.0664335666
[2025-04-26 21:02:11] 2025-04-27 01:01:52,973 | INFO     | -- intersect: -6846082461.9055805
[2025-04-26 21:02:11] 2025-04-27 01:01:52,973 | INFO     | intersect: -6846082461.9055805
[2025-04-26 21:02:11] 2025-04-27 01:01:52,974 | INFO     | chi2: 0.057830937798927846
[2025-04-26 21:02:11] 2025-04-27 01:01:52,974 | INFO     | current chi2=0.057830937798927846 (change=80.69058963737173 %)
[2025-04-26 21:02:11] 2025-04-27 01:01:52,974 | INFO     | sum of square deviations: 6879809343.551634
[2025-04-26 21:02:11] 2025-04-27 01:01:53,013 | INFO     | sum of deviations: 17898954068.601425
[2025-04-26 21:02:11] 2025-04-27 01:01:53,013 | INFO     | mean x: 1745707109.7437723
[2025-04-26 21:02:11] 2025-04-27 01:01:53,014 | INFO     | mean y: 2487834.772241993
[2025-04-26 21:02:11] 2025-04-27 01:01:53,014 | INFO     | -- intersect: -4539255956.982911
[2025-04-26 21:02:11] 2025-04-27 01:01:53,014 | INFO     | intersect: -4539255956.982911
[2025-04-26 21:02:11] 2025-04-27 01:01:53,014 | INFO     | chi2: 0.00781060194360429
[2025-04-26 21:02:11] 2025-04-27 01:01:53,014 | INFO     | current chi2=0.00781060194360429 (change=86.4940769752672 %)
[2025-04-26 21:02:11] 2025-04-27 01:01:53,014 | INFO     | sum of square deviations: 6519009957.75
[2025-04-26 21:02:11] 2025-04-27 01:01:53,051 | INFO     | sum of deviations: 14993233152.999994
[2025-04-26 21:02:11] 2025-04-27 01:01:53,051 | INFO     | mean x: 1745707262.25
[2025-04-26 21:02:11] 2025-04-27 01:01:53,051 | INFO     | mean y: 2489061.4782608696
[2025-04-26 21:02:11] 2025-04-27 01:01:53,051 | INFO     | -- intersect: -4012506492.9745035
[2025-04-26 21:02:11] 2025-04-27 01:01:53,051 | INFO     | intersect: -4012506492.9745035
[2025-04-26 21:02:11] 2025-04-27 01:01:53,051 | INFO     | chi2: 0.005870966257885306
[2025-04-26 21:02:11] 2025-04-27 01:01:53,051 | INFO     | current chi2=0.005870966257885306 (change=24.833370074725856 %)
[2025-04-26 21:02:11] 2025-04-27 01:01:53,052 | INFO     | left removable region: 60
[2025-04-26 21:02:11] 2025-04-27 01:01:53,052 | INFO     | sum of square deviations: 4286142863.583343
[2025-04-26 21:02:11] 2025-04-27 01:01:53,053 | INFO     | sum of deviations: 7118273959.75
[2025-04-26 21:02:11] 2025-04-27 01:01:53,053 | INFO     | mean x: 1745707994.2916667
[2025-04-26 21:02:11] 2025-04-27 01:01:53,053 | INFO     | mean y: 2492101.275
[2025-04-26 21:02:11] 2025-04-27 01:01:53,082 | INFO     | -- intersect: -2896717783.368208
[2025-04-26 21:02:11] 2025-04-27 01:01:53,082 | INFO     | intersect: -2896717783.368208
[2025-04-26 21:02:11] 2025-04-27 01:01:53,082 | INFO     | chi2: 0.003166744333974986
[2025-04-26 21:02:11] 2025-04-27 01:01:53,082 | INFO     | -- intersect: -2896717783.368208
[2025-04-26 21:02:11] 2025-04-27 01:01:53,083 | INFO     | current memory leak: 1.66 B/s (using 240 data points, chi2=0.00)
[2025-04-26 21:02:11] 2025-04-27 01:01:53,108 | INFO     | ..............................
[2025-04-26 21:02:11] 2025-04-27 01:01:53,108 | INFO     | . Timing measurements:
[2025-04-26 21:02:11] 2025-04-27 01:01:53,108 | INFO     | . get job = 0 s
[2025-04-26 21:02:11] 2025-04-27 01:01:53,108 | INFO     | . initial setup = 4 s
[2025-04-26 21:02:11] 2025-04-27 01:01:53,108 | INFO     | . payload setup = 10 s
[2025-04-26 21:02:11] 2025-04-27 01:01:53,108 | INFO     | . stage-in = 0 s
[2025-04-26 21:02:11] 2025-04-27 01:01:53,108 | INFO     | . payload execution = 18657 s
[2025-04-26 21:02:11] 2025-04-27 01:01:53,108 | INFO     | . stage-out = 3 s
[2025-04-26 21:02:11] 2025-04-27 01:01:53,108 | INFO     | . log creation = 0 s
[2025-04-26 21:02:11] 2025-04-27 01:01:53,108 | INFO     | ..............................
[2025-04-26 21:02:11] 2025-04-27 01:01:54,227 | INFO     | 
[2025-04-26 21:02:11] 2025-04-27 01:01:54,227 | INFO     | job summary report
[2025-04-26 21:02:11] 2025-04-27 01:01:54,227 | INFO     | --------------------------------------------------
[2025-04-26 21:02:11] 2025-04-27 01:01:54,227 | INFO     | PanDA job id: 6617460127
[2025-04-26 21:02:11] 2025-04-27 01:01:54,227 | INFO     | task id: 44292257
[2025-04-26 21:02:11] 2025-04-27 01:01:54,227 | INFO     | errors: (none)
[2025-04-26 21:02:11] 2025-04-27 01:01:54,227 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-26 21:02:11] 2025-04-27 01:01:54,227 | INFO     | pilot state: finished 
[2025-04-26 21:02:11] 2025-04-27 01:01:54,227 | INFO     | transexitcode: 0
[2025-04-26 21:02:11] 2025-04-27 01:01:54,227 | INFO     | exeerrorcode: 0
[2025-04-26 21:02:11] 2025-04-27 01:01:54,227 | INFO     | exeerrordiag: 
[2025-04-26 21:02:11] 2025-04-27 01:01:54,227 | INFO     | exitcode: 0
[2025-04-26 21:02:11] 2025-04-27 01:01:54,227 | INFO     | exitmsg: OK
[2025-04-26 21:02:11] 2025-04-27 01:01:54,227 | INFO     | cpuconsumptiontime: 45083 s
[2025-04-26 21:02:11] 2025-04-27 01:01:54,228 | INFO     | nevents: 400
[2025-04-26 21:02:11] 2025-04-27 01:01:54,228 | INFO     | neventsw: 0
[2025-04-26 21:02:11] 2025-04-27 01:01:54,228 | INFO     | pid: 3303238
[2025-04-26 21:02:11] 2025-04-27 01:01:54,228 | INFO     | pgrp: 3303238
[2025-04-26 21:02:11] 2025-04-27 01:01:54,228 | INFO     | corecount: 9
[2025-04-26 21:02:11] 2025-04-27 01:01:54,228 | INFO     | event service: False
[2025-04-26 21:02:11] 2025-04-27 01:01:54,228 | INFO     | sizes: {0: 2393449, 1: 2393533, 2: 2393732, 8: 2393938, 13: 2393966, 18671: 2426240, 18672: 2426367, 18676: 2435364, 18678: 2435420, 18687: 2435590}
[2025-04-26 21:02:11] 2025-04-27 01:01:54,228 | INFO     | --------------------------------------------------
[2025-04-26 21:02:11] 2025-04-27 01:01:54,228 | INFO     | 
[2025-04-26 21:02:11] 2025-04-27 01:01:54,228 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-04-26 21:02:11] 2025-04-27 01:01:54,294 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-26 21:02:11] 2025-04-27 01:01:54,294 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-26 21:02:11] 2025-04-27 01:01:54,294 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-26 21:02:11] 2025-04-27 01:01:54,294 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-26 21:02:11] 2025-04-27 01:01:54,295 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-26 21:02:11] 2025-04-27 01:01:54,295 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-26 21:02:11] 2025-04-27 01:01:54,295 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-26 21:02:11] 2025-04-27 01:01:54,295 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-26 21:02:11] 2025-04-27 01:01:54,295 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-26 21:02:11] 2025-04-27 01:01:54,295 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-26 21:02:11] 2025-04-27 01:01:54,295 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-26 21:02:11] 2025-04-27 01:01:54,295 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-26 21:02:11] 2025-04-27 01:01:54,295 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-26 21:02:11] 2025-04-27 01:01:54,295 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-26 21:02:11] 2025-04-27 01:01:54,295 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-26 21:02:11] 2025-04-27 01:01:54,295 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-26 21:02:11] 2025-04-27 01:01:54,295 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-26 21:02:11] 2025-04-27 01:01:54,296 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-26 21:02:11] 2025-04-27 01:01:54,296 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-26 21:02:11] 2025-04-27 01:01:54,296 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-26 21:02:11] 2025-04-27 01:01:54,296 | INFO     | job 6617460127 has completed (purged errors)
[2025-04-26 21:02:11] 2025-04-27 01:01:54,296 | INFO     | overall cleanup function is called
[2025-04-26 21:02:11] 2025-04-27 01:01:54,683 | INFO     | PID=3296464 has CPU usage=10.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-04-26 21:02:11] 2025-04-27 01:01:54,684 | INFO     | .. there are 14 such processes running
[2025-04-26 21:02:11] 2025-04-27 01:01:55,331 | INFO     | --- collectZombieJob: --- 10, [3303238]
[2025-04-26 21:02:11] 2025-04-27 01:01:55,332 | INFO     | zombie collector waiting for pid 3303238
[2025-04-26 21:02:11] 2025-04-27 01:01:55,332 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-26 21:02:11] 2025-04-27 01:01:55,332 | INFO     | collected zombie processes
[2025-04-26 21:02:11] 2025-04-27 01:01:55,332 | INFO     | will attempt to kill all subprocesses of pid=3303238
[2025-04-26 21:02:11] 2025-04-27 01:01:56,432 | INFO     | process IDs to be killed: [3303238] (in reverse order)
[2025-04-26 21:02:11] 2025-04-27 01:01:56,554 | WARNING  | found no corresponding commands to process id(s)
[2025-04-26 21:02:11] 2025-04-27 01:01:56,555 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-26 21:02:11] 2025-04-27 01:01:56,567 | INFO     | did not find any defunct processes belonging to 3303238
[2025-04-26 21:02:11] 2025-04-27 01:01:56,579 | INFO     | did not find any defunct processes belonging to 3303238
[2025-04-26 21:02:11] 2025-04-27 01:01:56,580 | INFO     | ready for new job
[2025-04-26 21:02:11] 2025-04-27 01:01:56,580 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-26 21:02:11] 2025-04-27 01:01:56,582 | INFO     | **************************************
[2025-04-26 21:02:11] 2025-04-27 01:01:56,582 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-26 21:02:11] 2025-04-27 01:01:56,582 | INFO     | **************************************
[2025-04-26 21:02:11] 2025-04-27 01:01:56,582 | INFO     | 
[2025-04-26 21:02:11] 2025-04-27 01:01:56,598 | INFO     | architecture information:
[2025-04-26 21:02:11] 2025-04-27 01:01:56,605 | INFO     | executing command: cat /etc/os-release
[2025-04-26 21:02:11] 2025-04-27 01:01:56,638 | INFO     | cat /etc/os-release:
[2025-04-26 21:02:11] NAME="CentOS Linux"
[2025-04-26 21:02:11] VERSION="7 (Core)"
[2025-04-26 21:02:11] ID="centos"
[2025-04-26 21:02:11] ID_LIKE="rhel fedora"
[2025-04-26 21:02:11] VERSION_ID="7"
[2025-04-26 21:02:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-26 21:02:11] ANSI_COLOR="0;31"
[2025-04-26 21:02:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-26 21:02:11] HOME_URL="https://www.centos.org/"
[2025-04-26 21:02:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-26 21:02:11] 
[2025-04-26 21:02:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-26 21:02:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-26 21:02:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-26 21:02:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-26 21:02:11] 
[2025-04-26 21:02:11] 2025-04-27 01:01:56,638 | INFO     | **************************************
[2025-04-26 21:02:11] 2025-04-27 01:01:57,142 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-04-26 21:02:11] 2025-04-27 01:01:57,176 | INFO     | sufficient remaining disk space (76018614272 B)
[2025-04-26 21:02:11] 2025-04-27 01:01:57,177 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-26 21:02:11] 2025-04-27 01:01:57,177 | INFO     | current server update state: UPDATING_FINAL
[2025-04-26 21:02:11] 2025-04-27 01:01:57,177 | INFO     | update_server=False
[2025-04-26 21:02:11] 2025-04-27 01:01:57,177 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-26 21:02:11] 2025-04-27 01:01:57,179 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-26 21:02:11] 2025-04-27 01:01:57,180 | INFO     | found 0 job(s) in 20 queues
[2025-04-26 21:02:11] 2025-04-27 01:01:57,180 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-26 21:02:11] 2025-04-27 01:01:57,180 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-26 21:02:11] 2025-04-27 01:01:57,399 | INFO     | all payload control threads have been joined
[2025-04-26 21:02:11] 2025-04-27 01:01:57,410 | INFO     | all data control threads have been joined
[2025-04-26 21:02:11] 2025-04-27 01:01:57,511 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-26 21:02:11] 2025-04-27 01:01:57,513 | INFO     | aborting loop
[2025-04-26 21:02:11] 2025-04-27 01:01:58,002 | INFO     | all job control threads have been joined
[2025-04-26 21:02:11] 2025-04-27 01:01:58,191 | INFO     | [job] retrieve thread has finished
[2025-04-26 21:02:11] 2025-04-27 01:01:58,270 | INFO     | [payload] failed_post thread has finished
[2025-04-26 21:02:11] 2025-04-27 01:01:58,405 | INFO     | [payload] control thread has finished
[2025-04-26 21:02:11] 2025-04-27 01:01:58,417 | INFO     | [data] control thread has finished
[2025-04-26 21:02:11] 2025-04-27 01:01:58,519 | INFO     | [job] job monitor thread has finished
[2025-04-26 21:02:11] 2025-04-27 01:01:58,551 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-26 21:02:11] 2025-04-27 01:01:58,759 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-26 21:02:11] 2025-04-27 01:01:59,008 | INFO     | [job] control thread has finished
[2025-04-26 21:02:11] 2025-04-27 01:01:59,134 | INFO     | [payload] validate_post thread has finished
[2025-04-26 21:02:11] 2025-04-27 01:01:59,259 | INFO     | [payload] execute_payloads thread has finished
[2025-04-26 21:02:11] 2025-04-27 01:01:59,260 | INFO     | [payload] validate_pre thread has finished
[2025-04-26 21:02:11] 2025-04-27 01:01:59,333 | INFO     | [job] validate thread has finished
[2025-04-26 21:02:11] 2025-04-27 01:01:59,333 | INFO     | [data] copytool_in thread has finished
[2025-04-26 21:02:11] 2025-04-27 01:01:59,488 | INFO     | [job] create_data_payload thread has finished
[2025-04-26 21:02:11] 2025-04-27 01:01:59,561 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-26 21:02:11] 2025-04-27 01:01:59,753 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-26 21:02:11] 2025-04-27 01:01:59,765 | INFO     | [job] queue monitor thread has finished
[2025-04-26 21:02:11] 2025-04-27 01:02:00,559 | INFO     | [data] copytool_out thread has finished
[2025-04-26 21:02:11] 2025-04-27 01:02:03,763 | INFO     | [data] queue_monitor thread has finished
[2025-04-26 21:02:11] 2025-04-27 01:02:05,674 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139861591574336)>', '<ExcThread(monitor, started 139860979480320)>']
[2025-04-26 21:02:11] 2025-04-27 01:02:06,273 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-26 21:02:11] 2025-04-27 01:02:06,275 | INFO     | [monitor] control thread has ended
[2025-04-26 21:02:11] 2025-04-27 01:02:10,700 | INFO     | all workflow threads have been joined
[2025-04-26 21:02:11] 2025-04-27 01:02:10,701 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-26 21:02:11] 2025-04-27 01:02:10,701 | INFO     | traces error code: 0
[2025-04-26 21:02:11] 2025-04-27 01:02:10,701 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-26 21:02:11] 2025-04-27 01:02:11,303 [wrapper] ==== pilot stdout END ====
[2025-04-26 21:02:11] 2025-04-27 01:02:11,308 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-26 21:02:11] 2025-04-27 01:02:11,313 [wrapper] pilotpid: 3296464
[2025-04-26 21:02:11] 2025-04-27 01:02:11,316 [wrapper] Pilot exit status: 0
[2025-04-26 21:02:11] 2025-04-27 01:02:11,354 [wrapper] pandaids: 6617460127
[2025-04-26 21:02:11] 2025-04-27 01:02:11,443 [wrapper] cleanup supervisor_pilot 1228252 3296465
[2025-04-26 21:02:11] 2025-04-27 01:02:11,466 [wrapper] Test setup, not cleaning
[2025-04-26 21:02:11] 2025-04-27 01:02:11,478 [wrapper] apfmon messages muted
[2025-04-26 21:02:11] 2025-04-27 01:02:11,481 [wrapper] ==== wrapper stdout END ====
[2025-04-26 21:02:11] 2025-04-27 01:02:11,487 [wrapper] ==== wrapper stderr END ====
[2025-04-26 21:02:11]  *** Error codes and diagnostics ***
[2025-04-26 21:02:11]     "exeErrorCode": 0,
[2025-04-26 21:02:11]     "exeErrorDiag": "",
[2025-04-26 21:02:11]     "pilotErrorCode": 0,
[2025-04-26 21:02:11]     "pilotErrorDiag": "",
[2025-04-26 21:02:11]  *** Listing of results directory ***
[2025-04-26 21:02:11] total 417204
[2025-04-26 21:02:11] -rw-r--r--. 1 boincer umatlas    495897 Apr 26 07:59 pilot3.tar.gz
[2025-04-26 21:02:11] -rw-r--r--. 1 boincer umatlas      5111 Apr 26 08:08 queuedata.json
[2025-04-26 21:02:11] -rwx------. 1 boincer umatlas     37140 Apr 26 08:09 runpilot2-wrapper.sh
[2025-04-26 21:02:11] -rw-r--r--. 1 boincer umatlas       100 Apr 26 15:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-26 21:02:11] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 26 15:49 run_atlas
[2025-04-26 21:02:11] -rw-r--r--. 1 boincer umatlas       105 Apr 26 15:49 job.xml
[2025-04-26 21:02:11] -rw-r--r--. 2 boincer umatlas 225817075 Apr 26 15:49 EVNT.44292255._000362.pool.root.1
[2025-04-26 21:02:11] drwxrwx--x. 2 boincer umatlas      4096 Apr 26 15:49 shared
[2025-04-26 21:02:11] -rw-r--r--. 2 boincer umatlas    508878 Apr 26 15:49 input.tar.gz
[2025-04-26 21:02:11] -rw-r--r--. 2 boincer umatlas     17569 Apr 26 15:49 start_atlas.sh
[2025-04-26 21:02:11] -rw-r--r--. 1 boincer umatlas         0 Apr 26 15:49 boinc_lockfile
[2025-04-26 21:02:11] -rw-r--r--. 1 boincer umatlas      2548 Apr 26 15:49 pandaJob.out
[2025-04-26 21:02:11] -rw-------. 1 boincer umatlas       467 Apr 26 15:49 setup.sh.local
[2025-04-26 21:02:11] -rw-------. 1 boincer umatlas    993192 Apr 26 15:50 agis_schedconf.cvmfs.json
[2025-04-26 21:02:11] drwx------. 4 boincer umatlas      4096 Apr 26 15:50 pilot3
[2025-04-26 21:02:11] -rw-r--r--. 1 boincer umatlas      6840 Apr 26 20:54 init_data.xml
[2025-04-26 21:02:11] -rw-------. 1 boincer umatlas 193535211 Apr 26 21:00 HITS.44292257._009063.pool.root.1
[2025-04-26 21:02:11] -rw-r--r--. 1 boincer umatlas       531 Apr 26 21:00 boinc_task_state.xml
[2025-04-26 21:02:11] -rw-------. 1 boincer umatlas        95 Apr 26 21:01 pilot_heartbeat.json
[2025-04-26 21:02:11] -rw-------. 1 boincer umatlas      1053 Apr 26 21:01 memory_monitor_summary.json
[2025-04-26 21:02:11] -rw-------. 1 boincer umatlas   1596659 Apr 26 21:01 agis_ddmendpoints.agis.ALL.json
[2025-04-26 21:02:11] -rw-------. 1 boincer umatlas    451551 Apr 26 21:01 log.44292257._009063.job.log.tgz.1
[2025-04-26 21:02:11] -rw-------. 1 boincer umatlas      7738 Apr 26 21:01 heartbeat.json
[2025-04-26 21:02:11] -rw-r--r--. 1 boincer umatlas      8192 Apr 26 21:02 boinc_mmap_file
[2025-04-26 21:02:11] -rw-r--r--. 1 boincer umatlas        28 Apr 26 21:02 wrapper_checkpoint.txt
[2025-04-26 21:02:11] -rw-------. 1 boincer umatlas      4476 Apr 26 21:02 pilotlog.txt
[2025-04-26 21:02:11] -rw-------. 1 boincer umatlas   1560776 Apr 26 21:02 log.44292257._009063.job.log.1
[2025-04-26 21:02:11] -rw-------. 1 boincer umatlas       357 Apr 26 21:02 output.list
[2025-04-26 21:02:11] -rw-r--r--. 1 boincer umatlas       620 Apr 26 21:02 runtime_log
[2025-04-26 21:02:11] -rw-------. 1 boincer umatlas   2027520 Apr 26 21:02 result.tar.gz
[2025-04-26 21:02:11] -rw-------. 1 boincer umatlas       661 Apr 26 21:02 OxYLDmzWtS7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmkTqLDmlMf4Tn.diag
[2025-04-26 21:02:11] -rw-r--r--. 1 boincer umatlas     11419 Apr 26 21:02 runtime_log.err
[2025-04-26 21:02:11] -rw-r--r--. 1 boincer umatlas     21051 Apr 26 21:02 stderr.txt
[2025-04-26 21:02:11] HITS file was successfully produced:
[2025-04-26 21:02:11] -rw-------. 1 boincer umatlas 193535211 Apr 26 21:00 shared/HITS.pool.root.1
[2025-04-26 21:02:11]  *** Contents of shared directory: ***
[2025-04-26 21:02:11] total 412032
[2025-04-26 21:02:11] -rw-r--r--. 2 boincer umatlas 225817075 Apr 26 15:49 ATLAS.root_0
[2025-04-26 21:02:11] -rw-r--r--. 2 boincer umatlas    508878 Apr 26 15:49 input.tar.gz
[2025-04-26 21:02:11] -rw-r--r--. 2 boincer umatlas     17569 Apr 26 15:49 start_atlas.sh
[2025-04-26 21:02:11] -rw-------. 1 boincer umatlas 193535211 Apr 26 21:00 HITS.pool.root.1
[2025-04-26 21:02:11] -rw-------. 1 boincer umatlas   2027520 Apr 26 21:02 result.tar.gz
21:02:13 (3291312): run_atlas exited; CPU time 45607.592317
21:02:13 (3291312): called boinc_finish(0)

</stderr_txt>
]]>

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