Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-26 15:44:58 (2176): Detected: vboxwrapper 26206
2025-04-26 15:44:58 (2176): Detected: BOINC client v8.0.2
2025-04-26 15:44:59 (2176): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-04-26 15:44:59 (2176): Successfully copied 'init_data.xml' to the shared directory.
2025-04-26 15:45:00 (2176): Create VM. (boinc_1d5dea95a63a6863, slot#3)
2025-04-26 15:45:01 (2176): Setting Memory Size for VM. (4800MB)
2025-04-26 15:45:01 (2176): Setting CPU Count for VM. (8)
2025-04-26 15:45:01 (2176): Setting Chipset Options for VM.
2025-04-26 15:45:01 (2176): Setting Graphics Controller Options for VM.
2025-04-26 15:45:02 (2176): Setting Boot Options for VM.
2025-04-26 15:45:02 (2176): Setting Network Configuration for NAT.
2025-04-26 15:45:02 (2176): Enabling VM Network Access.
2025-04-26 15:45:03 (2176): Disabling USB Support for VM.
2025-04-26 15:45:03 (2176): Disabling COM Port Support for VM.
2025-04-26 15:45:03 (2176): Disabling LPT Port Support for VM.
2025-04-26 15:45:03 (2176): Disabling Audio Support for VM.
2025-04-26 15:45:04 (2176): Disabling Clipboard Support for VM.
2025-04-26 15:45:04 (2176): Disabling Drag and Drop Support for VM.
2025-04-26 15:45:04 (2176): Adding storage controller(s) to VM.
2025-04-26 15:45:05 (2176): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-26 15:45:08 (2176): Adding VirtualBox Guest Additions to VM.
2025-04-26 15:45:08 (2176): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-26 15:45:08 (2176): forwarding host port 56226 to guest port 80
2025-04-26 15:45:09 (2176): Enabling remote desktop for VM.
2025-04-26 15:45:09 (2176): Required extension pack not installed, remote desktop not enabled.
2025-04-26 15:45:09 (2176): Enabling shared directory for VM.
2025-04-26 15:45:09 (2176): Starting VM using VBoxManage interface. (boinc_1d5dea95a63a6863, slot#3)
2025-04-26 15:45:20 (2176): Successfully started VM. (PID = '3524')
2025-04-26 15:45:20 (2176): Reporting VM Process ID to BOINC.
2025-04-26 15:45:20 (2176): Guest Log: BIOS: VirtualBox 7.0.6
2025-04-26 15:45:20 (2176): Guest Log: CPUID EDX: 0x178bfbff
2025-04-26 15:45:20 (2176): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-26 15:45:20 (2176): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-26 15:45:20 (2176): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-26 15:45:20 (2176): Detected: Web Application Enabled (http://localhost:56226)
2025-04-26 15:45:20 (2176): Preference change detected
2025-04-26 15:45:20 (2176): Setting CPU throttle for VM. (100%)
2025-04-26 15:45:20 (2176): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-26 15:45:22 (2176): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-26 15:45:22 (2176): Guest Log: BIOS: Booting from Hard Disk...
2025-04-26 15:45:25 (2176): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-26 15:45:25 (2176): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-26 15:45:25 (2176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-26 15:45:25 (2176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-26 15:45:25 (2176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-26 15:45:25 (2176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-26 15:45:25 (2176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-26 15:45:25 (2176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-26 15:45:25 (2176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-26 15:45:25 (2176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-26 15:45:25 (2176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-26 15:45:25 (2176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-26 15:45:25 (2176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-26 15:45:25 (2176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-26 15:45:25 (2176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-26 15:45:25 (2176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-26 15:45:25 (2176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-26 15:45:25 (2176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-26 15:45:25 (2176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-26 15:45:25 (2176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-26 15:45:25 (2176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-26 15:45:25 (2176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-26 15:45:25 (2176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-26 15:45:25 (2176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-26 15:45:25 (2176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-26 15:45:25 (2176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-26 15:45:25 (2176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-26 15:45:25 (2176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-26 15:45:25 (2176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-26 15:45:25 (2176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-26 15:45:25 (2176): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-26 15:45:25 (2176): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-26 15:45:35 (2176): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-26 15:45:35 (2176): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-26 15:45:48 (2176): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-26 15:45:48 (2176): Guest Log: 00:00:00.000798 main     Log opened 2025-04-26T15:45:47.418845000Z
2025-04-26 15:45:48 (2176): Guest Log: 00:00:00.001344 main     OS Product: Linux
2025-04-26 15:45:48 (2176): Guest Log: 00:00:00.001437 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-26 15:45:48 (2176): Guest Log: 00:00:00.001508 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-26 15:45:48 (2176): Guest Log: 00:00:00.001582 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-26 15:45:48 (2176): Guest Log: 00:00:00.001585 main     Process ID: 1368
2025-04-26 15:45:48 (2176): Guest Log: 00:00:00.001586 main     Package type: LINUX_64BITS_GENERIC
2025-04-26 15:45:48 (2176): Guest Log: 00:00:00.003120 main     5.2.32 r132073 started. Verbose level = 0
2025-04-26 15:45:49 (2176): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-26 15:45:49 (2176): Guest Log: [INFO] Mounting shared directory
2025-04-26 15:45:49 (2176): Guest Log: [INFO] Checking for init_data.xml
2025-04-26 15:45:59 (2176): Guest Log: 00:00:10.024914 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 528 498 000ns (GuestNow=1 745 675 158 895 743 000 ns GuestLast=1 745 682 347 424 241 000 ns fSetTimeLastLoop=true )
2025-04-26 15:46:01 (2176): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-26 15:46:01 (2176): Guest Log: [INFO] Detected branch: prod
2025-04-26 15:46:01 (2176): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-26 15:46:01 (2176): Guest Log: Copying input files
2025-04-26 15:46:03 (2176): Guest Log: Copied input files into RunAtlas.
2025-04-26 15:46:03 (2176): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-26 15:46:03 (2176): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-26 15:46:03 (2176): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-26 15:46:03 (2176): Guest Log: Further information can be found at the LHC@home message board.
2025-04-26 15:46:14 (2176): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-26 15:46:15 (2176): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-26 15:46:15 (2176): Guest Log: 2.6.3.0 1646 0 32208 145304 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-26 15:46:16 (2176): Guest Log: copied the webapp to /var/www
2025-04-26 15:46:16 (2176): Guest Log: ATHENA_PROC_NUMBER=8
2025-04-26 15:46:16 (2176): Guest Log: ATHENA_CORE_NUMBER=8
2025-04-26 15:46:17 (2176): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-26 15:46:17 (2176): Guest Log:  *** Starting ATLAS job. (PandaID=6617456099 taskID=44292257) ***
2025-04-26 17:26:09 (2176): Status Report: Elapsed Time: '6000.000000'
2025-04-26 17:26:09 (2176): Status Report: CPU Time: '31999.703125'
2025-04-26 19:07:23 (2176): Status Report: Elapsed Time: '12000.979374'
2025-04-26 19:07:23 (2176): Status Report: CPU Time: '76808.046875'
2025-04-26 20:48:59 (2176): Status Report: Elapsed Time: '18001.842493'
2025-04-26 20:48:59 (2176): Status Report: CPU Time: '123431.468750'
2025-04-26 21:28:50 (2176): Guest Log:  *** Job finished ***
2025-04-26 21:28:50 (2176): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-26 21:28:50 (2176): Guest Log: 2025-04-26 19:28:36,602 | INFO     | [data] copytool_out thread has finished
2025-04-26 21:28:50 (2176): Guest Log: 2025-04-26 19:28:36,603 | INFO     | [job] validate thread has finished
2025-04-26 21:28:50 (2176): Guest Log: 2025-04-26 19:28:39,974 | INFO     | [data] queue_monitor thread has finished
2025-04-26 21:28:50 (2176): Guest Log: 2025-04-26 19:28:41,887 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140235945359168)>', '<ExcThread(monitor, started 140234842961664)>']
2025-04-26 21:28:50 (2176): Guest Log: 2025-04-26 19:28:42,838 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-26 21:28:50 (2176): Guest Log: 2025-04-26 19:28:42,838 | INFO     | [monitor] control thread has ended
2025-04-26 21:28:50 (2176): Guest Log: 2025-04-26 19:28:46,898 | INFO     | all workflow threads have been joined
2025-04-26 21:28:50 (2176): Guest Log: 2025-04-26 19:28:46,898 | INFO     | end of generic workflow (traces error code: 0)
2025-04-26 21:28:50 (2176): Guest Log: 2025-04-26 19:28:46,898 | INFO     | traces error code: 0
2025-04-26 21:28:50 (2176): Guest Log: 2025-04-26 19:28:46,898 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-26 21:28:50 (2176): Guest Log: 2025-04-26 19:28:47,029 [wrapper] ==== pilot stdout END ====
2025-04-26 21:28:50 (2176): Guest Log: 2025-04-26 19:28:47,037 [wrapper] ==== wrapper stdout RESUME ====
2025-04-26 21:28:50 (2176): Guest Log: 2025-04-26 19:28:47,051 [wrapper] pilotpid: 6034
2025-04-26 21:28:50 (2176): Guest Log: 2025-04-26 19:28:47,058 [wrapper] Pilot exit status: 0
2025-04-26 21:28:50 (2176): Guest Log: 2025-04-26 19:28:47,891 [wrapper] pandaids: 6617456099
2025-04-26 21:28:50 (2176): Guest Log: 2025-04-26 19:28:47,942 [wrapper] cleanup supervisor_pilot 22118 6035
2025-04-26 21:28:50 (2176): Guest Log: 2025-04-26 19:28:47,950 [wrapper] Test setup, not cleaning
2025-04-26 21:28:50 (2176): Guest Log: 2025-04-26 19:28:47,957 [wrapper] apfmon messages muted
2025-04-26 21:28:50 (2176): Guest Log: 2025-04-26 19:28:47,964 [wrapper] ==== wrapper stdout END ====
2025-04-26 21:28:50 (2176): Guest Log: 2025-04-26 19:28:47,971 [wrapper] ==== wrapper stderr END ====
2025-04-26 21:28:50 (2176): Guest Log:  *** Error codes and diagnostics ***
2025-04-26 21:28:50 (2176): Guest Log:     "exeErrorCode": 0,
2025-04-26 21:28:50 (2176): Guest Log:     "exeErrorDiag": "",
2025-04-26 21:28:50 (2176): Guest Log:     "pilotErrorCode": 0,
2025-04-26 21:28:50 (2176): Guest Log:     "pilotErrorDiag": "",
2025-04-26 21:28:50 (2176): Guest Log:  *** Listing of results directory ***
2025-04-26 21:28:50 (2176): Guest Log: total 199692
2025-04-26 21:28:50 (2176): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 26 09:41 pilot3.tar.gz
2025-04-26 21:28:50 (2176): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 26 10:01 queuedata.json
2025-04-26 21:28:50 (2176): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 26 10:02 runpilot2-wrapper.sh
2025-04-26 21:28:50 (2176): Guest Log: -rwxr-xr-x. 1 atlas atlas      8669 Apr 26 13:46 init_data.xml
2025-04-26 21:28:50 (2176): Guest Log: -rwxr-xr-x. 1 atlas atlas    508877 Apr 26 13:46 input.tar.gz
2025-04-26 21:28:50 (2176): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr 26 13:46 start_atlas.sh
2025-04-26 21:28:50 (2176): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 26 13:46 EVNT.44292255._000315.pool.root.1 -> /data/./ATLAS.root_0
2025-04-26 21:28:50 (2176): Guest Log: -rw-r--r--. 1 atlas atlas      2548 Apr 26 13:46 pandaJob.out
2025-04-26 21:28:50 (2176): Guest Log: -rw-------. 1 atlas atlas       424 Apr 26 13:46 setup.sh.local
2025-04-26 21:28:50 (2176): Guest Log: -rw-------. 1 atlas atlas    993152 Apr 26 13:49 agis_schedconf.cvmfs.json
2025-04-26 21:28:50 (2176): Guest Log: drwx------. 4 atlas atlas      4096 Apr 26 13:50 pilot3
2025-04-26 21:28:50 (2176): Guest Log: -rw-------. 1 atlas atlas 196750875 Apr 26 19:27 HITS.44292257._007879.pool.root.1
2025-04-26 21:28:50 (2176): Guest Log: -rw-------. 1 atlas atlas      1033 Apr 26 19:27 memory_monitor_summary.json
2025-04-26 21:28:50 (2176): Guest Log: -rw-------. 1 atlas atlas   1596659 Apr 26 19:28 agis_ddmendpoints.agis.ALL.json
2025-04-26 21:28:50 (2176): Guest Log: -rw-------. 1 atlas atlas    424560 Apr 26 19:28 log.44292257._007879.job.log.tgz.1
2025-04-26 21:28:50 (2176): Guest Log: -rw-------. 1 atlas atlas        96 Apr 26 19:28 pilot_heartbeat.json
2025-04-26 21:28:50 (2176): Guest Log: -rw-------. 1 atlas atlas      7733 Apr 26 19:28 heartbeat.json
2025-04-26 21:28:50 (2176): Guest Log: -rw-------. 1 atlas atlas      4413 Apr 26 19:28 pilotlog.txt
2025-04-26 21:28:50 (2176): Guest Log: -rw-------. 1 atlas atlas   1555757 Apr 26 19:28 log.44292257._007879.job.log.1
2025-04-26 21:28:50 (2176): Guest Log: -rw-------. 1 atlas atlas       357 Apr 26 19:28 output.list
2025-04-26 21:28:50 (2176): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 26 19:28 runtime_log
2025-04-26 21:28:50 (2176): Guest Log: -rw-------. 1 atlas atlas   1996800 Apr 26 19:28 result.tar.gz
2025-04-26 21:28:50 (2176): Guest Log: -rw-r--r--. 1 atlas atlas     10924 Apr 26 19:28 runtime_log.err
2025-04-26 21:28:50 (2176): Guest Log: -rw-------. 1 atlas atlas       654 Apr 26 19:28 racKDm4XrS7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmgHqLDmCAdO4n.diag
2025-04-26 21:28:50 (2176): Guest Log: Looking for outputfile HITS.44292257._007879.pool.root.1
2025-04-26 21:28:50 (2176): Guest Log: HITS file was successfully produced
2025-04-26 21:28:50 (2176): Guest Log: -rw-------. 1 atlas atlas 196750875 Apr 26 19:27 /home/atlas/RunAtlas/HITS.44292257._007879.pool.root.1
2025-04-26 21:28:52 (2176): Guest Log: Successfully finished the ATLAS job!
2025-04-26 21:28:52 (2176): Guest Log: Copying the results back to the shared directory!
2025-04-26 21:28:52 (2176): Guest Log:  *** Contents of shared directory: ***
2025-04-26 21:28:52 (2176): Guest Log: total 413168
2025-04-26 21:28:52 (2176): Guest Log: -rwxrwxrwx. 1 root root 223788816 Apr 26 13:44 ATLAS.root_0
2025-04-26 21:28:52 (2176): Guest Log: -rwxrwxrwx. 1 root root 196750875 Apr 26 19:28 HITS.pool.root.1
2025-04-26 21:28:52 (2176): Guest Log: -rwxrwxrwx. 1 root root      8669 Apr 26 13:44 init_data.xml
2025-04-26 21:28:52 (2176): Guest Log: -rwxrwxrwx. 1 root root    508877 Apr 26 13:26 input.tar.gz
2025-04-26 21:28:52 (2176): Guest Log: -rwxrwxrwx. 1 root root   1996800 Apr 26 19:28 result.tar.gz
2025-04-26 21:28:52 (2176): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 26 13:26 start_atlas.sh
2025-04-26 21:28:52 (2176): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-26 21:28:52 (2176): VM Completion File Detected.
2025-04-26 21:28:52 (2176): Powering off VM.
2025-04-26 21:28:53 (2176): Successfully stopped VM.
2025-04-26 21:28:53 (2176): Deregistering VM. (boinc_1d5dea95a63a6863, slot#3)
2025-04-26 21:28:53 (2176): Removing network bandwidth throttle group from VM.
2025-04-26 21:28:53 (2176): Removing VM from VirtualBox.
21:28:59 (2176): called boinc_finish(0)

</stderr_txt>
]]>

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