Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-26 09:03:41 (6654): Detected: vboxwrapper 26206
2025-04-26 09:03:41 (6654): Detected: BOINC client v8.0.2
2025-04-26 09:03:41 (6654): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2025-04-26 09:03:41 (6654): Detected: Sandbox Configuration Enabled
2025-04-26 09:03:41 (6654): Successfully copied 'init_data.xml' to the shared directory.
2025-04-26 09:03:41 (6654): Create VM. (boinc_a1c5c9ab79b53529, slot#4)
2025-04-26 09:03:41 (6654): Setting Memory Size for VM. (4400MB)
2025-04-26 09:03:41 (6654): Setting CPU Count for VM. (4)
2025-04-26 09:03:41 (6654): Setting Chipset Options for VM.
2025-04-26 09:03:41 (6654): Setting Graphics Controller Options for VM.
2025-04-26 09:03:41 (6654): Setting Boot Options for VM.
2025-04-26 09:03:41 (6654): Setting Network Configuration for NAT.
2025-04-26 09:03:41 (6654): Enabling VM Network Access.
2025-04-26 09:03:41 (6654): Disabling USB Support for VM.
2025-04-26 09:03:41 (6654): Disabling COM Port Support for VM.
2025-04-26 09:03:41 (6654): Disabling Audio Support for VM.
2025-04-26 09:03:42 (6654): Disabling Clipboard Support for VM.
2025-04-26 09:03:42 (6654): Disabling Drag and Drop Support for VM.
2025-04-26 09:03:42 (6654): Adding storage controller(s) to VM.
2025-04-26 09:03:42 (6654): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-26 09:03:43 (6654): Adding VirtualBox Guest Additions to VM.
2025-04-26 09:03:43 (6654): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-26 09:03:43 (6654): forwarding host port 57240 to guest port 80
2025-04-26 09:03:43 (6654): Enabling remote desktop for VM.
2025-04-26 09:03:43 (6654): Required extension pack not installed, remote desktop not enabled.
2025-04-26 09:03:43 (6654): Enabling shared directory for VM.
2025-04-26 09:03:43 (6654): Starting VM using VBoxManage interface. (boinc_a1c5c9ab79b53529, slot#4)
2025-04-26 09:03:48 (6654): Successfully started VM. (PID = '6725')
2025-04-26 09:03:48 (6654): Reporting VM Process ID to BOINC.
2025-04-26 09:03:48 (6654): Guest Log: BIOS: VirtualBox 7.1.4
2025-04-26 09:03:48 (6654): Guest Log: CPUID EDX: 0x178bfbff
2025-04-26 09:03:48 (6654): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-26 09:03:48 (6654): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-26 09:03:48 (6654): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-26 09:03:48 (6654): Detected: Web Application Enabled (http://localhost:57240)
2025-04-26 09:03:48 (6654): Preference change detected
2025-04-26 09:03:48 (6654): Setting CPU throttle for VM. (100%)
2025-04-26 09:03:48 (6654): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-26 09:03:50 (6654): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-26 09:03:50 (6654): Guest Log: BIOS: Booting from Hard Disk...
2025-04-26 09:03:52 (6654): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-26 09:03:52 (6654): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-26 09:03:52 (6654): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-26 09:03:52 (6654): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-26 09:03:52 (6654): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-26 09:03:52 (6654): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-26 09:03:52 (6654): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-26 09:03:52 (6654): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-26 09:03:52 (6654): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-26 09:03:52 (6654): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-26 09:03:52 (6654): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-26 09:03:52 (6654): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-26 09:03:52 (6654): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-26 09:03:52 (6654): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-26 09:03:52 (6654): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-26 09:03:52 (6654): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-26 09:03:52 (6654): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-26 09:03:52 (6654): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-26 09:03:52 (6654): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-26 09:03:52 (6654): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-26 09:03:52 (6654): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-26 09:03:52 (6654): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-26 09:03:52 (6654): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-26 09:03:52 (6654): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-26 09:03:52 (6654): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-26 09:03:52 (6654): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-26 09:03:52 (6654): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-26 09:03:52 (6654): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-26 09:03:52 (6654): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-26 09:03:52 (6654): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-26 09:03:52 (6654): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-26 09:03:52 (6654): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-26 09:03:59 (6654): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-26 09:03:59 (6654): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-26 09:04:08 (6654): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-26 09:04:08 (6654): Guest Log: 00:00:00.000209 main     Log opened 2025-04-26T13:04:06.543567000Z
2025-04-26 09:04:08 (6654): Guest Log: 00:00:00.000299 main     OS Product: Linux
2025-04-26 09:04:08 (6654): Guest Log: 00:00:00.000344 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-26 09:04:08 (6654): Guest Log: 00:00:00.000385 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-26 09:04:08 (6654): Guest Log: 00:00:00.000427 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-26 09:04:08 (6654): Guest Log: 00:00:00.000428 main     Process ID: 1304
2025-04-26 09:04:08 (6654): Guest Log: 00:00:00.000429 main     Package type: LINUX_64BITS_GENERIC
2025-04-26 09:04:08 (6654): Guest Log: 00:00:00.001975 main     5.2.32 r132073 started. Verbose level = 0
2025-04-26 09:04:30 (6654): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-26 09:04:30 (6654): Guest Log: [INFO] Mounting shared directory
2025-04-26 09:04:30 (6654): Guest Log: [INFO] Checking for init_data.xml
2025-04-26 09:05:24 (6654): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-26 09:05:24 (6654): Guest Log: [INFO] Detected branch: prod
2025-04-26 09:05:29 (6654): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-26 09:05:29 (6654): Guest Log: Copying input files
2025-04-26 09:05:31 (6654): Guest Log: Copied input files into RunAtlas.
2025-04-26 09:05:31 (6654): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-26 09:05:31 (6654): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-26 09:05:31 (6654): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-26 09:05:31 (6654): Guest Log: Further information can be found at the LHC@home message board.
2025-04-26 09:06:15 (6654): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-26 09:06:21 (6654): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-26 09:06:21 (6654): Guest Log: 2.6.3.0 1612 1 30052 145303 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-26 09:06:22 (6654): Guest Log: copied the webapp to /var/www
2025-04-26 09:06:23 (6654): Guest Log: ATHENA_PROC_NUMBER=4
2025-04-26 09:06:23 (6654): Guest Log: ATHENA_CORE_NUMBER=4
2025-04-26 09:06:28 (6654): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-26 09:06:28 (6654): Guest Log:  *** Starting ATLAS job. (PandaID=6617268727 taskID=44292257) ***
2025-04-26 10:43:48 (6654): Status Report: Elapsed Time: '6000.000000'
2025-04-26 10:43:48 (6654): Status Report: CPU Time: '18923.680000'
2025-04-26 11:06:46 (6654): Guest Log:  *** Job finished ***
2025-04-26 11:06:46 (6654): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-26 11:06:46 (6654): Guest Log: 2025-04-26 15:06:31,494 | INFO     | [data] control thread has finished
2025-04-26 11:06:46 (6654): Guest Log: 2025-04-26 15:06:31,986 | INFO     | [payload] validate_post thread has finished
2025-04-26 11:06:46 (6654): Guest Log: 2025-04-26 15:06:33,449 | INFO     | [data] queue_monitor thread has finished
2025-04-26 11:06:46 (6654): Guest Log: 2025-04-26 15:06:33,454 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140217628587840)>', '<ExcThread(monitor, started 140217017149184)>']
2025-04-26 11:06:46 (6654): Guest Log: 2025-04-26 15:06:34,452 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-26 11:06:46 (6654): Guest Log: 2025-04-26 15:06:34,452 | INFO     | [monitor] control thread has ended
2025-04-26 11:06:46 (6654): Guest Log: 2025-04-26 15:06:38,456 | INFO     | all workflow threads have been joined
2025-04-26 11:06:46 (6654): Guest Log: 2025-04-26 15:06:38,457 | INFO     | end of generic workflow (traces error code: 0)
2025-04-26 11:06:46 (6654): Guest Log: 2025-04-26 15:06:38,457 | INFO     | traces error code: 0
2025-04-26 11:06:46 (6654): Guest Log: 2025-04-26 15:06:38,457 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-26 11:06:46 (6654): Guest Log: 2025-04-26 15:06:38,538 [wrapper] ==== pilot stdout END ====
2025-04-26 11:06:46 (6654): Guest Log: 2025-04-26 15:06:38,548 [wrapper] ==== wrapper stdout RESUME ====
2025-04-26 11:06:46 (6654): Guest Log: 2025-04-26 15:06:38,556 [wrapper] pilotpid: 5986
2025-04-26 11:06:46 (6654): Guest Log: 2025-04-26 15:06:38,566 [wrapper] Pilot exit status: 0
2025-04-26 11:06:46 (6654): Guest Log: 2025-04-26 15:06:40,336 [wrapper] pandaids: 6617268727
2025-04-26 11:06:46 (6654): Guest Log: 2025-04-26 15:06:40,383 [wrapper] cleanup supervisor_pilot  2466 5987
2025-04-26 11:06:46 (6654): Guest Log: 2025-04-26 15:06:40,391 [wrapper] Test setup, not cleaning
2025-04-26 11:06:46 (6654): Guest Log: 2025-04-26 15:06:40,399 [wrapper] apfmon messages muted
2025-04-26 11:06:46 (6654): Guest Log: 2025-04-26 15:06:40,406 [wrapper] ==== wrapper stdout END ====
2025-04-26 11:06:46 (6654): Guest Log: 2025-04-26 15:06:40,415 [wrapper] ==== wrapper stderr END ====
2025-04-26 11:06:46 (6654): Guest Log:  *** Error codes and diagnostics ***
2025-04-26 11:06:46 (6654): Guest Log:     "exeErrorCode": 0,
2025-04-26 11:06:46 (6654): Guest Log:     "exeErrorDiag": "",
2025-04-26 11:06:46 (6654): Guest Log:     "pilotErrorCode": 0,
2025-04-26 11:06:46 (6654): Guest Log:     "pilotErrorDiag": "",
2025-04-26 11:06:46 (6654): Guest Log:  *** Listing of results directory ***
2025-04-26 11:06:46 (6654): Guest Log: total 193736
2025-04-26 11:06:46 (6654): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 26 04:02 pilot3.tar.gz
2025-04-26 11:06:46 (6654): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 26 04:38 queuedata.json
2025-04-26 11:06:46 (6654): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 26 04:38 runpilot2-wrapper.sh
2025-04-26 11:06:46 (6654): Guest Log: -rw-r-----. 1 atlas atlas     17569 Apr 26 13:05 start_atlas.sh
2025-04-26 11:06:46 (6654): Guest Log: -rw-r-----. 1 atlas atlas    508880 Apr 26 13:05 input.tar.gz
2025-04-26 11:06:46 (6654): Guest Log: -rw-r--r--. 1 atlas atlas      8646 Apr 26 13:05 init_data.xml
2025-04-26 11:06:46 (6654): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 26 13:05 EVNT.44292255._000222.pool.root.1 -> /data/./ATLAS.root_0
2025-04-26 11:06:46 (6654): Guest Log: -rw-r--r--. 1 atlas atlas      2548 Apr 26 13:06 pandaJob.out
2025-04-26 11:06:46 (6654): Guest Log: -rw-------. 1 atlas atlas       424 Apr 26 13:06 setup.sh.local
2025-04-26 11:06:46 (6654): Guest Log: -rw-------. 1 atlas atlas    993137 Apr 26 13:10 agis_schedconf.cvmfs.json
2025-04-26 11:06:46 (6654): Guest Log: -rw-------. 1 atlas atlas   1596659 Apr 26 13:10 agis_ddmendpoints.agis.ALL.json
2025-04-26 11:06:46 (6654): Guest Log: drwx------. 4 atlas atlas      4096 Apr 26 13:10 pilot3
2025-04-26 11:06:46 (6654): Guest Log: -rw-------. 1 atlas atlas 193171973 Apr 26 15:03 HITS.44292257._005501.pool.root.1
2025-04-26 11:06:46 (6654): Guest Log: -rw-------. 1 atlas atlas      1032 Apr 26 15:04 memory_monitor_summary.json
2025-04-26 11:06:46 (6654): Guest Log: -rw-------. 1 atlas atlas    254449 Apr 26 15:04 log.44292257._005501.job.log.tgz.1
2025-04-26 11:06:46 (6654): Guest Log: -rw-------. 1 atlas atlas        95 Apr 26 15:05 pilot_heartbeat.json
2025-04-26 11:06:46 (6654): Guest Log: -rw-------. 1 atlas atlas      7687 Apr 26 15:06 heartbeat.json
2025-04-26 11:06:46 (6654): Guest Log: -rw-------. 1 atlas atlas      4536 Apr 26 15:06 pilotlog.txt
2025-04-26 11:06:46 (6654): Guest Log: -rw-------. 1 atlas atlas    464527 Apr 26 15:06 log.44292257._005501.job.log.1
2025-04-26 11:06:46 (6654): Guest Log: -rw-------. 1 atlas atlas       357 Apr 26 15:06 output.list
2025-04-26 11:06:46 (6654): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 26 15:06 runtime_log
2025-04-26 11:06:46 (6654): Guest Log: -rw-------. 1 atlas atlas    737280 Apr 26 15:06 result.tar.gz
2025-04-26 11:06:46 (6654): Guest Log: -rw-------. 1 atlas atlas       667 Apr 26 15:06 u8UKDm7TmS7n9Rq4apOajLDm4fhM0noT9bVoFjIUDm6MALDm4BtUdm.diag
2025-04-26 11:06:46 (6654): Guest Log: -rw-r--r--. 1 atlas atlas     10970 Apr 26 15:06 runtime_log.err
2025-04-26 11:06:46 (6654): Guest Log: Looking for outputfile HITS.44292257._005501.pool.root.1
2025-04-26 11:06:46 (6654): Guest Log: HITS file was successfully produced
2025-04-26 11:06:46 (6654): Guest Log: -rw-------. 1 atlas atlas 193171973 Apr 26 15:03 /home/atlas/RunAtlas/HITS.44292257._005501.pool.root.1
2025-04-26 11:06:46 (6654): Guest Log: Successfully finished the ATLAS job!
2025-04-26 11:06:46 (6654): Guest Log: Copying the results back to the shared directory!
2025-04-26 11:06:47 (6654): Guest Log:  *** Contents of shared directory: ***
2025-04-26 11:06:47 (6654): Guest Log: total 222760
2025-04-26 11:06:47 (6654): Guest Log: -rw-rw----. 1 root root 226820457 Apr 26 13:03 ATLAS.root_0
2025-04-26 11:06:47 (6654): Guest Log: -rw-rw-r--. 1 root root      8646 Apr 26 13:03 init_data.xml
2025-04-26 11:06:47 (6654): Guest Log: -rw-rw----. 1 root root    508880 Apr 26 13:03 input.tar.gz
2025-04-26 11:06:47 (6654): Guest Log: -rw-r--r--. 1 root root    737280 Apr 26  2025 result.tar.gz
2025-04-26 11:06:47 (6654): Guest Log: -rw-rw----. 1 root root     17569 Apr 26 13:03 start_atlas.sh
2025-04-26 11:06:47 (6654): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-26 11:06:47 (6654): VM Completion File Detected.
2025-04-26 11:06:47 (6654): Powering off VM.
2025-04-26 11:06:47 (6654): Successfully stopped VM.
2025-04-26 11:06:47 (6654): Deregistering VM. (boinc_a1c5c9ab79b53529, slot#4)
2025-04-26 11:06:47 (6654): Removing network bandwidth throttle group from VM.
2025-04-26 11:06:47 (6654): Removing VM from VirtualBox.
11:06:52 (6654): called boinc_finish(0)

</stderr_txt>
]]>

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