Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
22:24:16 (2045655): wrapper (7.7.26015): starting
22:24:16 (2045655): wrapper: running run_atlas (--nthreads 2)
[2025-04-27 22:24:16] Arguments: --nthreads 2
[2025-04-27 22:24:16] Threads: 2
[2025-04-27 22:24:16] Checking for CVMFS
[2025-04-27 22:24:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-27 22:24:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-27 22:24:17] Running cvmfs_config stat atlas.cern.ch
[2025-04-27 22:24:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-27 22:24:17] 2.12.7.0 1841542 2089 47896 145349 0 55 3064866 4096000 0 130560 0 489363 99.975 477411 2148 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.35.184:3128 1
[2025-04-27 22:24:17] CVMFS is ok
[2025-04-27 22:24:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-27 22:24:17] Checking for apptainer binary...
[2025-04-27 22:24:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-27 22:24:17] Running /usr/bin/apptainer --version
[2025-04-27 22:24:17] apptainer version 1.3.4
[2025-04-27 22:24:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-27 22:24:17] ahanllin07
[2025-04-27 22:24:17] apptainer works
[2025-04-27 22:24:17] Set ATHENA_PROC_NUMBER=2
[2025-04-27 22:24:17] Set ATHENA_CORE_NUMBER=2
[2025-04-27 22:24:17] Starting ATLAS job with PandaID=6617270794
[2025-04-27 22:24:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-28 15:06:05]  *** The last 200 lines of the pilot log: ***
[2025-04-28 15:06:05] 2025-04-28 13:05:39,905 | INFO     | monitor loop #4430: job 0:6617270794 is in state 'finished'
[2025-04-28 15:06:05] 2025-04-28 13:05:39,905 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-28 15:06:05] 2025-04-28 13:05:40,122 | INFO     | PID=2049235 has CPU usage=10.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-04-28 15:06:05] 2025-04-28 13:05:42,409 | INFO     | monitor loop #4431: job 0:6617270794 is in state 'finished'
[2025-04-28 15:06:05] 2025-04-28 13:05:42,409 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-28 15:06:05] 2025-04-28 13:05:44,494 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-28 15:06:05] 2025-04-28 13:05:44,494 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6617270794/memory_monitor_summary.json (trf name=prmon)
[2025-04-28 15:06:05] 2025-04-28 13:05:44,496 | INFO     | extracted standard info from prmon json
[2025-04-28 15:06:05] 2025-04-28 13:05:44,496 | INFO     | extracted standard memory fields from prmon json
[2025-04-28 15:06:05] 2025-04-28 13:05:44,496 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-28 15:06:05] 2025-04-28 13:05:44,497 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-28 15:06:05] 2025-04-28 13:05:44,497 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-28 15:06:05] 2025-04-28 13:05:44,521 | INFO     | fitting pss+swap vs Time
[2025-04-28 15:06:05] 2025-04-28 13:05:44,523 | INFO     | sum of square deviations: 295435902110.0
[2025-04-28 15:06:05] 2025-04-28 13:05:44,549 | INFO     | sum of deviations: -174624270377.0
[2025-04-28 15:06:05] 2025-04-28 13:05:44,549 | INFO     | mean x: 1745815487.5
[2025-04-28 15:06:05] 2025-04-28 13:05:44,550 | INFO     | mean y: 2269165.7540650405
[2025-04-28 15:06:05] 2025-04-28 13:05:44,550 | INFO     | -- intersect: 1034174068.1042354
[2025-04-28 15:06:05] 2025-04-28 13:05:44,550 | INFO     | intersect: 1034174068.1042354
[2025-04-28 15:06:05] 2025-04-28 13:05:44,551 | INFO     | chi2: 2.9768126668025583
[2025-04-28 15:06:05] 2025-04-28 13:05:44,553 | INFO     | sum of square deviations: 290955148330.0
[2025-04-28 15:06:05] 2025-04-28 13:05:44,578 | INFO     | sum of deviations: -174343995202.00003
[2025-04-28 15:06:05] 2025-04-28 13:05:44,578 | INFO     | mean x: 1745815335.0
[2025-04-28 15:06:05] 2025-04-28 13:05:44,579 | INFO     | mean y: 2269175.293156282
[2025-04-28 15:06:05] 2025-04-28 13:05:44,579 | INFO     | -- intersect: 1048383747.0263922
[2025-04-28 15:06:05] 2025-04-28 13:05:44,579 | INFO     | intersect: 1048383747.0263922
[2025-04-28 15:06:05] 2025-04-28 13:05:44,580 | INFO     | chi2: 2.97617079083803
[2025-04-28 15:06:05] 2025-04-28 13:05:44,580 | INFO     | current chi2=2.97617079083803 (change=0.02156252463201889 %)
[2025-04-28 15:06:05] 2025-04-28 13:05:44,581 | INFO     | right removable region: 978
[2025-04-28 15:06:05] 2025-04-28 13:05:44,582 | INFO     | sum of square deviations: 290955148330.0
[2025-04-28 15:06:05] 2025-04-28 13:05:44,607 | INFO     | sum of deviations: -363827590286.00006
[2025-04-28 15:06:05] 2025-04-28 13:05:44,607 | INFO     | mean x: 1745815640.0
[2025-04-28 15:06:05] 2025-04-28 13:05:44,608 | INFO     | mean y: 2275598.382022472
[2025-04-28 15:06:05] 2025-04-28 13:05:44,608 | INFO     | -- intersect: 2185347116.5542917
[2025-04-28 15:06:05] 2025-04-28 13:05:44,608 | INFO     | intersect: 2185347116.5542917
[2025-04-28 15:06:05] 2025-04-28 13:05:44,609 | INFO     | chi2: 1.0945218841824014
[2025-04-28 15:06:05] 2025-04-28 13:05:44,609 | INFO     | current chi2=1.0945218841824014 (change=63.23175131614699 %)
[2025-04-28 15:06:05] 2025-04-28 13:05:44,611 | INFO     | sum of square deviations: 286519930287.5
[2025-04-28 15:06:05] 2025-04-28 13:05:44,636 | INFO     | sum of deviations: -367975039608.50006
[2025-04-28 15:06:05] 2025-04-28 13:05:44,636 | INFO     | mean x: 1745815792.5
[2025-04-28 15:06:05] 2025-04-28 13:05:44,636 | INFO     | mean y: 2275737.3090349077
[2025-04-28 15:06:05] 2025-04-28 13:05:44,636 | INFO     | -- intersect: 2244411684.8841944
[2025-04-28 15:06:05] 2025-04-28 13:05:44,637 | INFO     | intersect: 2244411684.8841944
[2025-04-28 15:06:05] 2025-04-28 13:05:44,638 | INFO     | chi2: 1.029266587783434
[2025-04-28 15:06:05] 2025-04-28 13:05:44,638 | INFO     | current chi2=1.029266587783434 (change=5.961991015621637 %)
[2025-04-28 15:06:05] 2025-04-28 13:05:44,638 | INFO     | left removable region: 20
[2025-04-28 15:06:05] 2025-04-28 13:05:44,640 | INFO     | sum of square deviations: 272630523819.5
[2025-04-28 15:06:05] 2025-04-28 13:05:44,663 | INFO     | sum of deviations: -268037614646.50003
[2025-04-28 15:06:05] 2025-04-28 13:05:44,664 | INFO     | mean x: 1745815914.5
[2025-04-28 15:06:05] 2025-04-28 13:05:44,664 | INFO     | mean y: 2272307.8048016704
[2025-04-28 15:06:05] 2025-04-28 13:05:44,664 | INFO     | -- intersect: 1718677084.4184766
[2025-04-28 15:06:05] 2025-04-28 13:05:44,664 | INFO     | intersect: 1718677084.4184766
[2025-04-28 15:06:05] 2025-04-28 13:05:44,666 | INFO     | chi2: 0.8638986663167706
[2025-04-28 15:06:05] 2025-04-28 13:05:44,666 | INFO     | -- intersect: 1718677084.4184766
[2025-04-28 15:06:05] 2025-04-28 13:05:44,666 | INFO     | current memory leak: -0.98 B/s (using 958 data points, chi2=0.86)
[2025-04-28 15:06:05] 2025-04-28 13:05:44,668 | INFO     | ..............................
[2025-04-28 15:06:05] 2025-04-28 13:05:44,668 | INFO     | . Timing measurements:
[2025-04-28 15:06:05] 2025-04-28 13:05:44,668 | INFO     | . get job = 0 s
[2025-04-28 15:06:05] 2025-04-28 13:05:44,668 | INFO     | . initial setup = 2 s
[2025-04-28 15:06:05] 2025-04-28 13:05:44,668 | INFO     | . payload setup = 7 s
[2025-04-28 15:06:05] 2025-04-28 13:05:44,669 | INFO     | . stage-in = 0 s
[2025-04-28 15:06:05] 2025-04-28 13:05:44,669 | INFO     | . payload execution = 60031 s
[2025-04-28 15:06:05] 2025-04-28 13:05:44,669 | INFO     | . stage-out = 1 s
[2025-04-28 15:06:05] 2025-04-28 13:05:44,669 | INFO     | . log creation = 0 s
[2025-04-28 15:06:05] 2025-04-28 13:05:44,669 | INFO     | ..............................
[2025-04-28 15:06:05] 2025-04-28 13:05:44,969 | INFO     | 
[2025-04-28 15:06:05] 2025-04-28 13:05:44,970 | INFO     | job summary report
[2025-04-28 15:06:05] 2025-04-28 13:05:44,971 | INFO     | --------------------------------------------------
[2025-04-28 15:06:05] 2025-04-28 13:05:44,971 | INFO     | PanDA job id: 6617270794
[2025-04-28 15:06:05] 2025-04-28 13:05:44,971 | INFO     | task id: 44292257
[2025-04-28 15:06:05] 2025-04-28 13:05:44,971 | INFO     | errors: (none)
[2025-04-28 15:06:05] 2025-04-28 13:05:44,972 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-28 15:06:05] 2025-04-28 13:05:44,972 | INFO     | pilot state: finished 
[2025-04-28 15:06:05] 2025-04-28 13:05:44,972 | INFO     | transexitcode: 0
[2025-04-28 15:06:05] 2025-04-28 13:05:44,972 | INFO     | exeerrorcode: 0
[2025-04-28 15:06:05] 2025-04-28 13:05:44,973 | INFO     | exeerrordiag: 
[2025-04-28 15:06:05] 2025-04-28 13:05:44,973 | INFO     | exitcode: 0
[2025-04-28 15:06:05] 2025-04-28 13:05:44,973 | INFO     | exitmsg: OK
[2025-04-28 15:06:05] 2025-04-28 13:05:44,973 | INFO     | cpuconsumptiontime: 115917 s
[2025-04-28 15:06:05] 2025-04-28 13:05:44,974 | INFO     | nevents: 400
[2025-04-28 15:06:05] 2025-04-28 13:05:44,974 | INFO     | neventsw: 0
[2025-04-28 15:06:05] 2025-04-28 13:05:44,974 | INFO     | pid: 2055570
[2025-04-28 15:06:05] 2025-04-28 13:05:44,974 | INFO     | pgrp: 2055570
[2025-04-28 15:06:05] 2025-04-28 13:05:44,974 | INFO     | corecount: 2
[2025-04-28 15:06:05] 2025-04-28 13:05:44,975 | INFO     | event service: False
[2025-04-28 15:06:05] 2025-04-28 13:05:44,975 | INFO     | sizes: {0: 2393562, 1: 2393761, 2: 2393789, 7: 2393995, 13: 2394023, 60043: 2444851, 60046: 2453862, 60056: 2453976}
[2025-04-28 15:06:05] 2025-04-28 13:05:44,975 | INFO     | --------------------------------------------------
[2025-04-28 15:06:05] 2025-04-28 13:05:44,975 | INFO     | 
[2025-04-28 15:06:05] 2025-04-28 13:05:44,976 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-04-28 15:06:05] 2025-04-28 13:05:45,011 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-28 15:06:05] 2025-04-28 13:05:45,012 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-28 15:06:05] 2025-04-28 13:05:45,012 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-28 15:06:05] 2025-04-28 13:05:45,013 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-28 15:06:05] 2025-04-28 13:05:45,013 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-28 15:06:05] 2025-04-28 13:05:45,013 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-28 15:06:05] 2025-04-28 13:05:45,013 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-28 15:06:05] 2025-04-28 13:05:45,013 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-28 15:06:05] 2025-04-28 13:05:45,014 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-28 15:06:05] 2025-04-28 13:05:45,014 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-28 15:06:05] 2025-04-28 13:05:45,014 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-28 15:06:05] 2025-04-28 13:05:45,014 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-28 15:06:05] 2025-04-28 13:05:45,015 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-28 15:06:05] 2025-04-28 13:05:45,015 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-28 15:06:05] 2025-04-28 13:05:45,015 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-28 15:06:05] 2025-04-28 13:05:45,015 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-28 15:06:05] 2025-04-28 13:05:45,015 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-28 15:06:05] 2025-04-28 13:05:45,016 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-28 15:06:05] 2025-04-28 13:05:45,016 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-28 15:06:05] 2025-04-28 13:05:45,016 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-28 15:06:05] 2025-04-28 13:05:45,016 | INFO     | job 6617270794 has completed (purged errors)
[2025-04-28 15:06:05] 2025-04-28 13:05:45,017 | INFO     | overall cleanup function is called
[2025-04-28 15:06:05] 2025-04-28 13:05:46,026 | INFO     | --- collectZombieJob: --- 10, [2055570]
[2025-04-28 15:06:05] 2025-04-28 13:05:46,026 | INFO     | zombie collector waiting for pid 2055570
[2025-04-28 15:06:05] 2025-04-28 13:05:46,026 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-28 15:06:05] 2025-04-28 13:05:46,027 | INFO     | collected zombie processes
[2025-04-28 15:06:05] 2025-04-28 13:05:46,027 | INFO     | will attempt to kill all subprocesses of pid=2055570
[2025-04-28 15:06:05] 2025-04-28 13:05:46,115 | INFO     | process IDs to be killed: [2055570] (in reverse order)
[2025-04-28 15:06:05] 2025-04-28 13:05:46,172 | WARNING  | found no corresponding commands to process id(s)
[2025-04-28 15:06:05] 2025-04-28 13:05:46,173 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-28 15:06:05] 2025-04-28 13:05:46,177 | INFO     | did not find any defunct processes belonging to 2055570
[2025-04-28 15:06:05] 2025-04-28 13:05:46,180 | INFO     | did not find any defunct processes belonging to 2055570
[2025-04-28 15:06:05] 2025-04-28 13:05:46,181 | INFO     | ready for new job
[2025-04-28 15:06:05] 2025-04-28 13:05:46,181 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-28 15:06:05] 2025-04-28 13:05:46,186 | INFO     | **************************************
[2025-04-28 15:06:05] 2025-04-28 13:05:46,186 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-28 15:06:05] 2025-04-28 13:05:46,186 | INFO     | **************************************
[2025-04-28 15:06:05] 2025-04-28 13:05:46,186 | INFO     | 
[2025-04-28 15:06:05] 2025-04-28 13:05:46,187 | INFO     | pilot is running in a VM
[2025-04-28 15:06:05] 2025-04-28 13:05:46,187 | INFO     | architecture information:
[2025-04-28 15:06:05] 2025-04-28 13:05:46,188 | INFO     | executing command: cat /etc/os-release
[2025-04-28 15:06:05] 2025-04-28 13:05:46,208 | INFO     | cat /etc/os-release:
[2025-04-28 15:06:05] NAME="CentOS Linux"
[2025-04-28 15:06:05] VERSION="7 (Core)"
[2025-04-28 15:06:05] ID="centos"
[2025-04-28 15:06:05] ID_LIKE="rhel fedora"
[2025-04-28 15:06:05] VERSION_ID="7"
[2025-04-28 15:06:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-28 15:06:05] ANSI_COLOR="0;31"
[2025-04-28 15:06:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-28 15:06:05] HOME_URL="https://www.centos.org/"
[2025-04-28 15:06:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-28 15:06:05] 
[2025-04-28 15:06:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-28 15:06:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-28 15:06:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-28 15:06:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-28 15:06:05] 
[2025-04-28 15:06:05] 2025-04-28 13:05:46,209 | INFO     | **************************************
[2025-04-28 15:06:05] 2025-04-28 13:05:46,712 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-04-28 15:06:05] 2025-04-28 13:05:46,736 | INFO     | sufficient remaining disk space (45512392704 B)
[2025-04-28 15:06:05] 2025-04-28 13:05:46,736 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-28 15:06:05] 2025-04-28 13:05:46,737 | INFO     | current server update state: UPDATING_FINAL
[2025-04-28 15:06:05] 2025-04-28 13:05:46,737 | INFO     | update_server=False
[2025-04-28 15:06:05] 2025-04-28 13:05:46,737 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-28 15:06:05] 2025-04-28 13:05:46,738 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-28 15:06:05] 2025-04-28 13:05:46,738 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-28 15:06:05] 2025-04-28 13:05:46,739 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-28 15:06:05] 2025-04-28 13:05:46,739 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-28 15:06:05] 2025-04-28 13:05:46,740 | INFO     | aborting loop
[2025-04-28 15:06:05] 2025-04-28 13:05:46,741 | INFO     | found 0 job(s) in 20 queues
[2025-04-28 15:06:05] 2025-04-28 13:05:46,741 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-28 15:06:05] 2025-04-28 13:05:46,741 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-28 15:06:05] 2025-04-28 13:05:46,879 | INFO     | all payload control threads have been joined
[2025-04-28 15:06:05] 2025-04-28 13:05:47,111 | INFO     | all data control threads have been joined
[2025-04-28 15:06:05] 2025-04-28 13:05:47,741 | INFO     | [job] retrieve thread has finished
[2025-04-28 15:06:05] 2025-04-28 13:05:47,745 | INFO     | [job] queue monitor thread has finished
[2025-04-28 15:06:05] 2025-04-28 13:05:47,746 | INFO     | [job] job monitor thread has finished
[2025-04-28 15:06:05] 2025-04-28 13:05:47,762 | INFO     | all job control threads have been joined
[2025-04-28 15:06:05] 2025-04-28 13:05:47,787 | INFO     | [payload] failed_post thread has finished
[2025-04-28 15:06:05] 2025-04-28 13:05:47,885 | INFO     | [payload] control thread has finished
[2025-04-28 15:06:05] 2025-04-28 13:05:47,963 | INFO     | [job] create_data_payload thread has finished
[2025-04-28 15:06:05] 2025-04-28 13:05:47,972 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-28 15:06:05] 2025-04-28 13:05:48,117 | INFO     | [data] control thread has finished
[2025-04-28 15:06:05] 2025-04-28 13:05:48,478 | INFO     | [payload] validate_pre thread has finished
[2025-04-28 15:06:05] 2025-04-28 13:05:48,478 | INFO     | [job] validate thread has finished
[2025-04-28 15:06:05] 2025-04-28 13:05:48,479 | INFO     | [data] copytool_in thread has finished
[2025-04-28 15:06:05] 2025-04-28 13:05:48,767 | INFO     | [job] control thread has finished
[2025-04-28 15:06:05] 2025-04-28 13:05:48,856 | INFO     | [payload] validate_post thread has finished
[2025-04-28 15:06:05] 2025-04-28 13:05:49,196 | INFO     | [payload] execute_payloads thread has finished
[2025-04-28 15:06:05] 2025-04-28 13:05:49,978 | INFO     | [data] copytool_out thread has finished
[2025-04-28 15:06:05] 2025-04-28 13:05:50,747 | INFO     | [data] queue_monitor thread has finished
[2025-04-28 15:06:05] 2025-04-28 13:05:56,833 | INFO     | job.realtimelogging is not enabled
[2025-04-28 15:06:05] 2025-04-28 13:05:57,838 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-28 15:06:05] 2025-04-28 13:05:59,950 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 125605389014848)>', '<ExcThread(monitor, started 125604999464704)>']
[2025-04-28 15:06:05] 2025-04-28 13:06:00,804 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-28 15:06:05] 2025-04-28 13:06:00,805 | INFO     | [monitor] control thread has ended
[2025-04-28 15:06:05] 2025-04-28 13:06:04,970 | INFO     | all workflow threads have been joined
[2025-04-28 15:06:05] 2025-04-28 13:06:04,972 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-28 15:06:05] 2025-04-28 13:06:04,973 | INFO     | traces error code: 0
[2025-04-28 15:06:05] 2025-04-28 13:06:04,973 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-28 15:06:05] 2025-04-28 13:06:05,149 [wrapper] ==== pilot stdout END ====
[2025-04-28 15:06:05] 2025-04-28 13:06:05,153 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-28 15:06:05] 2025-04-28 13:06:05,158 [wrapper] pilotpid: 2049235
[2025-04-28 15:06:05] 2025-04-28 13:06:05,163 [wrapper] Pilot exit status: 0
[2025-04-28 15:06:05] 2025-04-28 13:06:05,182 [wrapper] pandaids: 6617270794
[2025-04-28 15:06:05] 2025-04-28 13:06:05,215 [wrapper] cleanup supervisor_pilot 2140347 2049236
[2025-04-28 15:06:05] 2025-04-28 13:06:05,221 [wrapper] Test setup, not cleaning
[2025-04-28 15:06:05] 2025-04-28 13:06:05,225 [wrapper] apfmon messages muted
[2025-04-28 15:06:05] 2025-04-28 13:06:05,230 [wrapper] ==== wrapper stdout END ====
[2025-04-28 15:06:05] 2025-04-28 13:06:05,234 [wrapper] ==== wrapper stderr END ====
[2025-04-28 15:06:05]  *** Error codes and diagnostics ***
[2025-04-28 15:06:05]     "exeErrorCode": 0,
[2025-04-28 15:06:05]     "exeErrorDiag": "",
[2025-04-28 15:06:05]     "pilotErrorCode": 0,
[2025-04-28 15:06:05]     "pilotErrorDiag": "",
[2025-04-28 15:06:05]  *** Listing of results directory ***
[2025-04-28 15:06:05] total 422572
[2025-04-28 15:06:05] -rw-r--r-- 1 boinc boinc    495897 Apr 26 07:02 pilot3.tar.gz
[2025-04-28 15:06:05] -rw-r--r-- 1 boinc boinc      5111 Apr 26 07:11 queuedata.json
[2025-04-28 15:06:05] -rwx------ 1 boinc boinc     37140 Apr 26 07:13 runpilot2-wrapper.sh
[2025-04-28 15:06:05] -rw-r--r-- 1 boinc boinc       100 Apr 27 22:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-28 15:06:05] -rwxr-xr-x 1 boinc boinc      7986 Apr 27 22:24 run_atlas
[2025-04-28 15:06:05] -rw-r--r-- 1 boinc boinc       105 Apr 27 22:24 job.xml
[2025-04-28 15:06:05] -rw-r--r-- 2 boinc boinc 223704974 Apr 27 22:24 EVNT.44292255._000234.pool.root.1
[2025-04-28 15:06:05] -rw-r--r-- 1 boinc boinc      6402 Apr 27 22:24 init_data.xml
[2025-04-28 15:06:05] -rw-r--r-- 2 boinc boinc     17569 Apr 27 22:24 start_atlas.sh
[2025-04-28 15:06:05] drwxrwx--x 2 boinc boinc      4096 Apr 27 22:24 shared
[2025-04-28 15:06:05] -rw-r--r-- 2 boinc boinc    508881 Apr 27 22:24 input.tar.gz
[2025-04-28 15:06:05] -rw-r--r-- 1 boinc boinc         0 Apr 27 22:24 boinc_lockfile
[2025-04-28 15:06:05] -rw-r--r-- 1 boinc boinc      2548 Apr 27 22:24 pandaJob.out
[2025-04-28 15:06:05] -rw------- 1 boinc boinc       461 Apr 27 22:24 setup.sh.local
[2025-04-28 15:06:05] -rw------- 1 boinc boinc    992879 Apr 27 22:24 agis_schedconf.cvmfs.json
[2025-04-28 15:06:05] drwx------ 4 boinc boinc      4096 Apr 27 22:24 pilot3
[2025-04-28 15:06:05] -rw------- 1 boinc boinc 193218072 Apr 28 15:04 HITS.44292257._005801.pool.root.1
[2025-04-28 15:06:05] -rw-r--r-- 1 boinc boinc       531 Apr 28 15:05 boinc_task_state.xml
[2025-04-28 15:06:05] -rw------- 1 boinc boinc        95 Apr 28 15:05 pilot_heartbeat.json
[2025-04-28 15:06:05] -rw------- 1 boinc boinc      1015 Apr 28 15:05 memory_monitor_summary.json
[2025-04-28 15:06:05] -rw------- 1 boinc boinc   1596659 Apr 28 15:05 agis_ddmendpoints.agis.ALL.json
[2025-04-28 15:06:05] -rw------- 1 boinc boinc    691992 Apr 28 15:05 log.44292257._005801.job.log.tgz.1
[2025-04-28 15:06:05] -rw------- 1 boinc boinc      7649 Apr 28 15:05 heartbeat.json
[2025-04-28 15:06:05] -rw-r--r-- 1 boinc boinc      8192 Apr 28 15:06 boinc_mmap_file
[2025-04-28 15:06:05] -rw------- 1 boinc boinc      4617 Apr 28 15:06 pilotlog.txt
[2025-04-28 15:06:05] -rw-r--r-- 1 boinc boinc        29 Apr 28 15:06 wrapper_checkpoint.txt
[2025-04-28 15:06:05] -rw------- 1 boinc boinc   5281047 Apr 28 15:06 log.44292257._005801.job.log.1
[2025-04-28 15:06:05] -rw------- 1 boinc boinc       357 Apr 28 15:06 output.list
[2025-04-28 15:06:05] -rw-r--r-- 1 boinc boinc       620 Apr 28 15:06 runtime_log
[2025-04-28 15:06:05] -rw------- 1 boinc boinc   5990400 Apr 28 15:06 result.tar.gz
[2025-04-28 15:06:05] -rw-r--r-- 1 boinc boinc     11490 Apr 28 15:06 runtime_log.err
[2025-04-28 15:06:05] -rw------- 1 boinc boinc       657 Apr 28 15:06 PMAODm81mS7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmKupLDm2piKJm.diag
[2025-04-28 15:06:05] -rw-r--r-- 1 boinc boinc     20853 Apr 28 15:06 stderr.txt
[2025-04-28 15:06:05] HITS file was successfully produced:
[2025-04-28 15:06:05] -rw------- 1 boinc boinc 193218072 Apr 28 15:04 shared/HITS.pool.root.1
[2025-04-28 15:06:05]  *** Contents of shared directory: ***
[2025-04-28 15:06:05] total 413536
[2025-04-28 15:06:05] -rw-r--r-- 2 boinc boinc 223704974 Apr 27 22:24 ATLAS.root_0
[2025-04-28 15:06:05] -rw-r--r-- 2 boinc boinc     17569 Apr 27 22:24 start_atlas.sh
[2025-04-28 15:06:05] -rw-r--r-- 2 boinc boinc    508881 Apr 27 22:24 input.tar.gz
[2025-04-28 15:06:05] -rw------- 1 boinc boinc 193218072 Apr 28 15:04 HITS.pool.root.1
[2025-04-28 15:06:05] -rw------- 1 boinc boinc   5990400 Apr 28 15:06 result.tar.gz
15:06:06 (2045655): run_atlas exited; CPU time 116617.516559
15:06:06 (2045655): called boinc_finish(0)

</stderr_txt>
]]>

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