Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-26 09:29:45 (12732): Detected: vboxwrapper 26206
2025-04-26 09:29:45 (12732): Detected: BOINC client v8.0.2
2025-04-26 09:29:46 (12732): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-04-26 09:29:46 (12732): Successfully copied 'init_data.xml' to the shared directory.
2025-04-26 09:29:47 (12732): Create VM. (boinc_a6c56e05195eaff4, slot#9)
2025-04-26 09:29:47 (12732): Setting Memory Size for VM. (4800MB)
2025-04-26 09:29:48 (12732): Setting CPU Count for VM. (8)
2025-04-26 09:29:48 (12732): Setting Chipset Options for VM.
2025-04-26 09:29:48 (12732): Setting Graphics Controller Options for VM.
2025-04-26 09:29:49 (12732): Setting Boot Options for VM.
2025-04-26 09:29:49 (12732): Setting Network Configuration for NAT.
2025-04-26 09:29:49 (12732): Enabling VM Network Access.
2025-04-26 09:29:49 (12732): Disabling USB Support for VM.
2025-04-26 09:29:50 (12732): Disabling COM Port Support for VM.
2025-04-26 09:29:50 (12732): Disabling LPT Port Support for VM.
2025-04-26 09:29:50 (12732): Disabling Audio Support for VM.
2025-04-26 09:29:51 (12732): Disabling Clipboard Support for VM.
2025-04-26 09:29:51 (12732): Disabling Drag and Drop Support for VM.
2025-04-26 09:29:51 (12732): Adding storage controller(s) to VM.
2025-04-26 09:29:51 (12732): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-26 09:29:54 (12732): Adding VirtualBox Guest Additions to VM.
2025-04-26 09:29:55 (12732): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-26 09:29:55 (12732): forwarding host port 65371 to guest port 80
2025-04-26 09:29:55 (12732): Enabling remote desktop for VM.
2025-04-26 09:29:56 (12732): Required extension pack not installed, remote desktop not enabled.
2025-04-26 09:29:56 (12732): Enabling shared directory for VM.
2025-04-26 09:29:56 (12732): Starting VM using VBoxManage interface. (boinc_a6c56e05195eaff4, slot#9)
2025-04-26 09:30:07 (12732): Successfully started VM. (PID = '2828')
2025-04-26 09:30:07 (12732): Reporting VM Process ID to BOINC.
2025-04-26 09:30:07 (12732): Guest Log: BIOS: VirtualBox 7.0.6
2025-04-26 09:30:07 (12732): Guest Log: CPUID EDX: 0x178bfbff
2025-04-26 09:30:07 (12732): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-26 09:30:07 (12732): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-26 09:30:07 (12732): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-26 09:30:07 (12732): Detected: Web Application Enabled (http://localhost:65371)
2025-04-26 09:30:07 (12732): Preference change detected
2025-04-26 09:30:07 (12732): Setting CPU throttle for VM. (100%)
2025-04-26 09:30:07 (12732): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-26 09:30:09 (12732): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-26 09:30:09 (12732): Guest Log: BIOS: Booting from Hard Disk...
2025-04-26 09:30:12 (12732): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-26 09:30:12 (12732): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-26 09:30:12 (12732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-26 09:30:12 (12732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-26 09:30:12 (12732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-26 09:30:12 (12732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-26 09:30:12 (12732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-26 09:30:12 (12732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-26 09:30:12 (12732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-26 09:30:12 (12732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-26 09:30:12 (12732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-26 09:30:12 (12732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-26 09:30:12 (12732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-26 09:30:12 (12732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-26 09:30:12 (12732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-26 09:30:12 (12732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-26 09:30:12 (12732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-26 09:30:12 (12732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-26 09:30:12 (12732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-26 09:30:12 (12732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-26 09:30:12 (12732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-26 09:30:12 (12732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-26 09:30:12 (12732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-26 09:30:12 (12732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-26 09:30:12 (12732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-26 09:30:12 (12732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-26 09:30:12 (12732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-26 09:30:12 (12732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-26 09:30:12 (12732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-26 09:30:12 (12732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-26 09:30:12 (12732): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-26 09:30:12 (12732): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-26 09:30:22 (12732): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-26 09:30:22 (12732): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-26 09:30:34 (12732): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-26 09:30:34 (12732): Guest Log: 00:00:00.000415 main     Log opened 2025-04-26T09:30:33.316559000Z
2025-04-26 09:30:34 (12732): Guest Log: 00:00:00.000611 main     OS Product: Linux
2025-04-26 09:30:34 (12732): Guest Log: 00:00:00.000674 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-26 09:30:34 (12732): Guest Log: 00:00:00.000733 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-26 09:30:34 (12732): Guest Log: 00:00:00.000801 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-26 09:30:34 (12732): Guest Log: 00:00:00.000803 main     Process ID: 1368
2025-04-26 09:30:34 (12732): Guest Log: 00:00:00.000804 main     Package type: LINUX_64BITS_GENERIC
2025-04-26 09:30:34 (12732): Guest Log: 00:00:00.002326 main     5.2.32 r132073 started. Verbose level = 0
2025-04-26 09:30:34 (12732): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-26 09:30:34 (12732): Guest Log: [INFO] Mounting shared directory
2025-04-26 09:30:35 (12732): Guest Log: [INFO] Checking for init_data.xml
2025-04-26 09:30:42 (12732): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-26 09:30:42 (12732): Guest Log: [INFO] Detected branch: prod
2025-04-26 09:30:43 (12732): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-26 09:30:43 (12732): Guest Log: Copying input files
2025-04-26 09:30:44 (12732): Guest Log: 00:00:10.006008 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 767 488 000ns (GuestNow=1 745 652 644 553 759 000 ns GuestLast=1 745 659 833 321 247 000 ns fSetTimeLastLoop=true )
2025-04-26 09:30:46 (12732): Guest Log: Copied input files into RunAtlas.
2025-04-26 09:30:46 (12732): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-26 09:30:46 (12732): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-26 09:30:46 (12732): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-26 09:30:46 (12732): Guest Log: Further information can be found at the LHC@home message board.
2025-04-26 09:30:56 (12732): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-26 09:30:56 (12732): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-26 09:30:56 (12732): Guest Log: 2.6.3.0 1647 0 30180 145295 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-26 09:30:57 (12732): Guest Log: copied the webapp to /var/www
2025-04-26 09:30:57 (12732): Guest Log: ATHENA_PROC_NUMBER=8
2025-04-26 09:30:57 (12732): Guest Log: ATHENA_CORE_NUMBER=8
2025-04-26 09:30:58 (12732): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-26 09:30:58 (12732): Guest Log:  *** Starting ATLAS job. (PandaID=6617263249 taskID=44292257) ***
2025-04-26 11:10:43 (12732): Status Report: Elapsed Time: '6000.000000'
2025-04-26 11:10:43 (12732): Status Report: CPU Time: '34011.031250'
2025-04-26 12:51:27 (12732): Status Report: Elapsed Time: '12000.091059'
2025-04-26 12:51:27 (12732): Status Report: CPU Time: '78807.765625'
2025-04-26 14:32:10 (12732): Status Report: Elapsed Time: '18000.470985'
2025-04-26 14:32:10 (12732): Status Report: CPU Time: '123823.312500'
2025-04-26 15:25:56 (12732): Guest Log:  *** Job finished ***
2025-04-26 15:25:56 (12732): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-26 15:25:56 (12732): Guest Log: 2025-04-26 13:25:42,722 | INFO     | [data] queue_monitor thread has finished
2025-04-26 15:25:56 (12732): Guest Log: 2025-04-26 13:25:47,899 | INFO     | job.realtimelogging is not enabled
2025-04-26 15:25:56 (12732): Guest Log: 2025-04-26 13:25:48,932 | INFO     | [payload] run_realtimelog thread has finished
2025-04-26 15:25:56 (12732): Guest Log: 2025-04-26 13:25:49,386 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139658506233664)>', '<ExcThread(monitor, started 139658193245952)>']
2025-04-26 15:25:56 (12732): Guest Log: 2025-04-26 13:25:49,825 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-26 15:25:56 (12732): Guest Log: 2025-04-26 13:25:49,826 | INFO     | [monitor] control thread has ended
2025-04-26 15:25:56 (12732): Guest Log: 2025-04-26 13:25:54,395 | INFO     | all workflow threads have been joined
2025-04-26 15:25:56 (12732): Guest Log: 2025-04-26 13:25:54,395 | INFO     | end of generic workflow (traces error code: 0)
2025-04-26 15:25:56 (12732): Guest Log: 2025-04-26 13:25:54,395 | INFO     | traces error code: 0
2025-04-26 15:25:56 (12732): Guest Log: 2025-04-26 13:25:54,396 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-26 15:25:56 (12732): Guest Log: 2025-04-26 13:25:54,525 [wrapper] ==== pilot stdout END ====
2025-04-26 15:25:56 (12732): Guest Log: 2025-04-26 13:25:54,532 [wrapper] ==== wrapper stdout RESUME ====
2025-04-26 15:25:56 (12732): Guest Log: 2025-04-26 13:25:54,539 [wrapper] pilotpid: 6026
2025-04-26 15:25:56 (12732): Guest Log: 2025-04-26 13:25:54,546 [wrapper] Pilot exit status: 0
2025-04-26 15:25:56 (12732): Guest Log: 2025-04-26 13:25:55,040 [wrapper] pandaids: 6617263249
2025-04-26 15:25:56 (12732): Guest Log: 2025-04-26 13:25:55,096 [wrapper] cleanup supervisor_pilot 22286 6027
2025-04-26 15:25:56 (12732): Guest Log: 2025-04-26 13:25:55,105 [wrapper] Test setup, not cleaning
2025-04-26 15:25:56 (12732): Guest Log: 2025-04-26 13:25:55,112 [wrapper] apfmon messages muted
2025-04-26 15:25:56 (12732): Guest Log: 2025-04-26 13:25:55,119 [wrapper] ==== wrapper stdout END ====
2025-04-26 15:25:56 (12732): Guest Log: 2025-04-26 13:25:55,126 [wrapper] ==== wrapper stderr END ====
2025-04-26 15:25:56 (12732): Guest Log:  *** Error codes and diagnostics ***
2025-04-26 15:25:56 (12732): Guest Log:     "exeErrorCode": 0,
2025-04-26 15:25:56 (12732): Guest Log:     "exeErrorDiag": "",
2025-04-26 15:25:56 (12732): Guest Log:     "pilotErrorCode": 0,
2025-04-26 15:25:56 (12732): Guest Log:     "pilotErrorDiag": "",
2025-04-26 15:25:56 (12732): Guest Log:  *** Listing of results directory ***
2025-04-26 15:25:56 (12732): Guest Log: total 203208
2025-04-26 15:25:56 (12732): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 26 01:21 pilot3.tar.gz
2025-04-26 15:25:56 (12732): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 26 01:28 queuedata.json
2025-04-26 15:25:56 (12732): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 26 01:28 runpilot2-wrapper.sh
2025-04-26 15:25:56 (12732): Guest Log: -rwxr-xr-x. 1 atlas atlas      8669 Apr 26 07:30 init_data.xml
2025-04-26 15:25:56 (12732): Guest Log: -rwxr-xr-x. 1 atlas atlas    508876 Apr 26 07:30 input.tar.gz
2025-04-26 15:25:56 (12732): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr 26 07:30 start_atlas.sh
2025-04-26 15:25:56 (12732): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 26 07:30 EVNT.44292255._000164.pool.root.1 -> /data/./ATLAS.root_0
2025-04-26 15:25:56 (12732): Guest Log: -rw-r--r--. 1 atlas atlas      2549 Apr 26 07:30 pandaJob.out
2025-04-26 15:25:56 (12732): Guest Log: -rw-------. 1 atlas atlas       424 Apr 26 07:31 setup.sh.local
2025-04-26 15:25:56 (12732): Guest Log: -rw-------. 1 atlas atlas    993158 Apr 26 07:32 agis_schedconf.cvmfs.json
2025-04-26 15:25:56 (12732): Guest Log: drwx------. 4 atlas atlas      4096 Apr 26 07:33 pilot3
2025-04-26 15:25:56 (12732): Guest Log: -rw-------. 1 atlas atlas 200108332 Apr 26 13:24 HITS.44292257._004050.pool.root.1
2025-04-26 15:25:56 (12732): Guest Log: -rw-------. 1 atlas atlas        95 Apr 26 13:24 pilot_heartbeat.json
2025-04-26 15:25:56 (12732): Guest Log: -rw-------. 1 atlas atlas      1035 Apr 26 13:25 memory_monitor_summary.json
2025-04-26 15:25:56 (12732): Guest Log: -rw-------. 1 atlas atlas   1596659 Apr 26 13:25 agis_ddmendpoints.agis.ALL.json
2025-04-26 15:25:56 (12732): Guest Log: -rw-------. 1 atlas atlas    448539 Apr 26 13:25 log.44292257._004050.job.log.tgz.1
2025-04-26 15:25:56 (12732): Guest Log: -rw-------. 1 atlas atlas      7729 Apr 26 13:25 heartbeat.json
2025-04-26 15:25:56 (12732): Guest Log: -rw-------. 1 atlas atlas      4925 Apr 26 13:25 pilotlog.txt
2025-04-26 15:25:56 (12732): Guest Log: -rw-------. 1 atlas atlas   1652048 Apr 26 13:25 log.44292257._004050.job.log.1
2025-04-26 15:25:56 (12732): Guest Log: -rw-------. 1 atlas atlas       357 Apr 26 13:25 output.list
2025-04-26 15:25:56 (12732): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 26 13:25 runtime_log
2025-04-26 15:25:56 (12732): Guest Log: -rw-------. 1 atlas atlas   2119680 Apr 26 13:25 result.tar.gz
2025-04-26 15:25:56 (12732): Guest Log: -rw-r--r--. 1 atlas atlas     10924 Apr 26 13:25 runtime_log.err
2025-04-26 15:25:56 (12732): Guest Log: -rw-------. 1 atlas atlas       654 Apr 26 13:25 AwxLDm9VjS7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm4apLDmr1ZoCo.diag
2025-04-26 15:25:56 (12732): Guest Log: Looking for outputfile HITS.44292257._004050.pool.root.1
2025-04-26 15:25:56 (12732): Guest Log: HITS file was successfully produced
2025-04-26 15:25:56 (12732): Guest Log: -rw-------. 1 atlas atlas 200108332 Apr 26 13:24 /home/atlas/RunAtlas/HITS.44292257._004050.pool.root.1
2025-04-26 15:25:57 (12732): Guest Log: Successfully finished the ATLAS job!
2025-04-26 15:25:57 (12732): Guest Log: Copying the results back to the shared directory!
2025-04-26 15:25:57 (12732): Guest Log:  *** Contents of shared directory: ***
2025-04-26 15:25:57 (12732): Guest Log: total 417044
2025-04-26 15:25:57 (12732): Guest Log: -rwxrwxrwx. 1 root root 224276273 Apr 26 07:29 ATLAS.root_0
2025-04-26 15:25:57 (12732): Guest Log: -rwxrwxrwx. 1 root root 200108332 Apr 26 13:25 HITS.pool.root.1
2025-04-26 15:25:57 (12732): Guest Log: -rwxrwxrwx. 1 root root      8669 Apr 26 07:29 init_data.xml
2025-04-26 15:25:57 (12732): Guest Log: -rwxrwxrwx. 1 root root    508876 Apr 26 05:38 input.tar.gz
2025-04-26 15:25:57 (12732): Guest Log: -rwxrwxrwx. 1 root root   2119680 Apr 26 13:25 result.tar.gz
2025-04-26 15:25:57 (12732): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 26 05:38 start_atlas.sh
2025-04-26 15:25:57 (12732): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-26 15:25:57 (12732): VM Completion File Detected.
2025-04-26 15:25:57 (12732): Powering off VM.
2025-04-26 15:25:58 (12732): Successfully stopped VM.
2025-04-26 15:25:58 (12732): Deregistering VM. (boinc_a6c56e05195eaff4, slot#9)
2025-04-26 15:25:58 (12732): Removing network bandwidth throttle group from VM.
2025-04-26 15:25:58 (12732): Removing VM from VirtualBox.
15:26:04 (12732): called boinc_finish(0)

</stderr_txt>
]]>

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