Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-26 04:29:06 (6412): Detected: vboxwrapper 26206
2025-04-26 04:29:06 (6412): Detected: BOINC client v8.0.2
2025-04-26 04:29:08 (6412): Detected: VirtualBox VboxManage Interface (Version: 6.1.34)
2025-04-26 04:29:08 (6412): Successfully copied 'init_data.xml' to the shared directory.
2025-04-26 04:29:09 (6412): Create VM. (boinc_8b3f3212feb44635, slot#4)
2025-04-26 04:29:09 (6412): Setting Memory Size for VM. (4800MB)
2025-04-26 04:29:09 (6412): Setting CPU Count for VM. (8)
2025-04-26 04:29:10 (6412): Setting Chipset Options for VM.
2025-04-26 04:29:10 (6412): Setting Graphics Controller Options for VM.
2025-04-26 04:29:10 (6412): Setting Boot Options for VM.
2025-04-26 04:29:11 (6412): Setting Network Configuration for NAT.
2025-04-26 04:29:11 (6412): Enabling VM Network Access.
2025-04-26 04:29:11 (6412): Disabling USB Support for VM.
2025-04-26 04:29:11 (6412): Disabling COM Port Support for VM.
2025-04-26 04:29:12 (6412): Disabling LPT Port Support for VM.
2025-04-26 04:29:12 (6412): Disabling Audio Support for VM.
2025-04-26 04:29:12 (6412): Disabling Clipboard Support for VM.
2025-04-26 04:29:12 (6412): Disabling Drag and Drop Support for VM.
2025-04-26 04:29:13 (6412): Adding storage controller(s) to VM.
2025-04-26 04:29:13 (6412): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-26 04:29:14 (6412): Adding VirtualBox Guest Additions to VM.
2025-04-26 04:29:14 (6412): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-26 04:29:15 (6412): forwarding host port 63612 to guest port 80
2025-04-26 04:29:15 (6412): Enabling remote desktop for VM.
2025-04-26 04:29:15 (6412): Required extension pack not installed, remote desktop not enabled.
2025-04-26 04:29:15 (6412): Enabling shared directory for VM.
2025-04-26 04:29:16 (6412): Starting VM using VBoxManage interface. (boinc_8b3f3212feb44635, slot#4)
2025-04-26 04:29:21 (6412): Successfully started VM. (PID = '5968')
2025-04-26 04:29:21 (6412): Reporting VM Process ID to BOINC.
2025-04-26 04:29:21 (6412): Guest Log: BIOS: VirtualBox 6.1.34
2025-04-26 04:29:21 (6412): Guest Log: CPUID EDX: 0x178bfbff
2025-04-26 04:29:21 (6412): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-26 04:29:21 (6412): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-26 04:29:21 (6412): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-26 04:29:21 (6412): Detected: Web Application Enabled (http://localhost:63612)
2025-04-26 04:29:21 (6412): Preference change detected
2025-04-26 04:29:21 (6412): Setting CPU throttle for VM. (50%)
2025-04-26 04:29:22 (6412): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-26 04:29:23 (6412): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-26 04:29:23 (6412): Guest Log: BIOS: Booting from Hard Disk...
2025-04-26 04:30:15 (6412): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-26 04:30:15 (6412): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-26 04:30:15 (6412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-26 04:30:15 (6412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-26 04:30:15 (6412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-26 04:30:15 (6412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-26 04:30:15 (6412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-26 04:30:15 (6412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-26 04:30:15 (6412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-26 04:30:15 (6412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-26 04:30:15 (6412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-26 04:30:15 (6412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-26 04:30:15 (6412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-26 04:30:15 (6412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-26 04:30:15 (6412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-26 04:30:15 (6412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-26 04:30:15 (6412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-26 04:30:15 (6412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-26 04:30:15 (6412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-26 04:30:15 (6412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-26 04:30:15 (6412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-26 04:30:15 (6412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-26 04:30:15 (6412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-26 04:30:15 (6412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-26 04:30:15 (6412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-26 04:30:15 (6412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-26 04:30:15 (6412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-26 04:30:15 (6412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-26 04:30:15 (6412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-26 04:30:15 (6412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-26 04:30:15 (6412): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-26 04:30:15 (6412): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-26 04:30:28 (6412): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-26 04:30:28 (6412): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-26 04:30:42 (6412): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-26 04:30:42 (6412): Guest Log: 00:00:00.000395 main     Log opened 2025-04-26T04:30:40.023447000Z
2025-04-26 04:30:42 (6412): Guest Log: 00:00:00.000884 main     OS Product: Linux
2025-04-26 04:30:42 (6412): Guest Log: 00:00:00.000989 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-26 04:30:42 (6412): Guest Log: 00:00:00.001141 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-26 04:30:42 (6412): Guest Log: 00:00:00.001239 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-26 04:30:42 (6412): Guest Log: 00:00:00.001242 main     Process ID: 1337
2025-04-26 04:30:42 (6412): Guest Log: 00:00:00.001243 main     Package type: LINUX_64BITS_GENERIC
2025-04-26 04:30:42 (6412): Guest Log: 00:00:00.008698 main     5.2.32 r132073 started. Verbose level = 0
2025-04-26 04:30:43 (6412): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-26 04:30:43 (6412): Guest Log: [INFO] Mounting shared directory
2025-04-26 04:30:43 (6412): Guest Log: [INFO] Checking for init_data.xml
2025-04-26 04:30:48 (6412): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-26 04:30:48 (6412): Guest Log: [INFO] Detected branch: prod
2025-04-26 04:30:49 (6412): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-26 04:30:49 (6412): Guest Log: Copying input files
2025-04-26 04:30:52 (6412): Guest Log: 00:00:10.024050 timesync vgsvcTimeSyncWorker: Radical guest time change: 25 212 042 637 000ns (GuestNow=1 745 667 052 078 279 000 ns GuestLast=1 745 641 840 035 642 000 ns fSetTimeLastLoop=true )
2025-04-26 04:30:52 (6412): Guest Log: Copied input files into RunAtlas.
2025-04-26 04:30:52 (6412): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-26 04:30:53 (6412): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-26 04:30:54 (6412): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-26 04:30:54 (6412): Guest Log: Further information can be found at the LHC@home message board.
2025-04-26 04:31:06 (6412): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-26 04:31:07 (6412): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-26 04:31:07 (6412): Guest Log: 2.6.3.0 1617 0 32036 145302 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-04-26 04:31:11 (6412): Guest Log: copied the webapp to /var/www
2025-04-26 04:31:11 (6412): Guest Log: ATHENA_PROC_NUMBER=8
2025-04-26 04:31:11 (6412): Guest Log: ATHENA_CORE_NUMBER=8
2025-04-26 04:31:13 (6412): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-26 04:31:13 (6412): Guest Log:  *** Starting ATLAS job. (PandaID=6617081251 taskID=44270670) ***
2025-04-26 04:38:39 (6412): VM state change detected. (old = 'running', new = 'paused')
2025-04-26 04:39:00 (6412): VM state change detected. (old = 'paused', new = 'running')
2025-04-26 05:13:02 (6412): VM state change detected. (old = 'running', new = 'paused')
2025-04-26 05:13:03 (6412): VM state change detected. (old = 'paused', new = 'running')
2025-04-26 06:09:51 (6412): Status Report: Elapsed Time: '6000.000000'
2025-04-26 06:09:51 (6412): Status Report: CPU Time: '17334.609375'
2025-04-26 07:49:56 (6412): Status Report: Elapsed Time: '12000.000000'
2025-04-26 07:49:56 (6412): Status Report: CPU Time: '46020.593750'
2025-04-26 09:30:02 (6412): Status Report: Elapsed Time: '18000.000000'
2025-04-26 09:30:02 (6412): Status Report: CPU Time: '74698.093750'
2025-04-26 11:10:07 (6412): Status Report: Elapsed Time: '24000.000000'
2025-04-26 11:10:07 (6412): Status Report: CPU Time: '103372.125000'
2025-04-26 11:35:38 (6412): Guest Log:  *** Job finished ***
2025-04-26 11:35:38 (6412): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-26 11:35:38 (6412): Guest Log: 2025-04-26 18:35:16,340 | INFO     | [data] copytool_in thread has finished
2025-04-26 11:35:38 (6412): Guest Log: 2025-04-26 18:35:17,045 | INFO     | [job] control thread has finished
2025-04-26 11:35:38 (6412): Guest Log: 2025-04-26 18:35:19,402 | INFO     | [data] queue_monitor thread has finished
2025-04-26 11:35:38 (6412): Guest Log: 2025-04-26 18:35:19,490 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139998221547328)>', '<ExcThread(monitor, started 139997411800832)>']
2025-04-26 11:35:38 (6412): Guest Log: 2025-04-26 18:35:20,130 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-26 11:35:38 (6412): Guest Log: 2025-04-26 18:35:20,131 | INFO     | [monitor] control thread has ended
2025-04-26 11:35:38 (6412): Guest Log: 2025-04-26 18:35:24,500 | INFO     | all workflow threads have been joined
2025-04-26 11:35:38 (6412): Guest Log: 2025-04-26 18:35:24,501 | INFO     | end of generic workflow (traces error code: 0)
2025-04-26 11:35:38 (6412): Guest Log: 2025-04-26 18:35:24,501 | INFO     | traces error code: 0
2025-04-26 11:35:38 (6412): Guest Log: 2025-04-26 18:35:24,502 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-26 11:35:38 (6412): Guest Log: 2025-04-26 18:35:24,677 [wrapper] ==== pilot stdout END ====
2025-04-26 11:35:38 (6412): Guest Log: 2025-04-26 18:35:24,708 [wrapper] ==== wrapper stdout RESUME ====
2025-04-26 11:35:38 (6412): Guest Log: 2025-04-26 18:35:24,716 [wrapper] pilotpid: 6009
2025-04-26 11:35:38 (6412): Guest Log: 2025-04-26 18:35:24,724 [wrapper] Pilot exit status: 0
2025-04-26 11:35:38 (6412): Guest Log: 2025-04-26 18:35:27,181 [wrapper] pandaids: 6617081251
2025-04-26 11:35:38 (6412): Guest Log: 2025-04-26 18:35:27,250 [wrapper] cleanup supervisor_pilot 24343 6010
2025-04-26 11:35:38 (6412): Guest Log: 2025-04-26 18:35:27,258 [wrapper] Test setup, not cleaning
2025-04-26 11:35:38 (6412): Guest Log: 2025-04-26 18:35:27,268 [wrapper] apfmon messages muted
2025-04-26 11:35:38 (6412): Guest Log: 2025-04-26 18:35:27,276 [wrapper] ==== wrapper stdout END ====
2025-04-26 11:35:38 (6412): Guest Log: 2025-04-26 18:35:27,284 [wrapper] ==== wrapper stderr END ====
2025-04-26 11:35:38 (6412): Guest Log:  *** Error codes and diagnostics ***
2025-04-26 11:35:38 (6412): Guest Log:     "exeErrorCode": 0,
2025-04-26 11:35:38 (6412): Guest Log:     "exeErrorDiag": "",
2025-04-26 11:35:38 (6412): Guest Log:     "pilotErrorCode": 0,
2025-04-26 11:35:38 (6412): Guest Log:     "pilotErrorDiag": "",
2025-04-26 11:35:38 (6412): Guest Log:  *** Listing of results directory ***
2025-04-26 11:35:38 (6412): Guest Log: total 202120
2025-04-26 11:35:38 (6412): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 25 20:27 pilot3.tar.gz
2025-04-26 11:35:38 (6412): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 25 20:37 runpilot2-wrapper.sh
2025-04-26 11:35:38 (6412): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 25 20:37 queuedata.json
2025-04-26 11:35:38 (6412): Guest Log: -rwxr-xr-x. 1 atlas atlas      8614 Apr 26 11:30 init_data.xml
2025-04-26 11:35:38 (6412): Guest Log: -rwxr-xr-x. 1 atlas atlas    508865 Apr 26 11:30 input.tar.gz
2025-04-26 11:35:38 (6412): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr 26 11:30 start_atlas.sh
2025-04-26 11:35:38 (6412): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 26 11:30 EVNT.44270667._000226.pool.root.1 -> /data/./ATLAS.root_0
2025-04-26 11:35:38 (6412): Guest Log: -rw-r--r--. 1 atlas atlas      2483 Apr 26 11:31 pandaJob.out
2025-04-26 11:35:38 (6412): Guest Log: -rw-------. 1 atlas atlas       424 Apr 26 11:31 setup.sh.local
2025-04-26 11:35:38 (6412): Guest Log: -rw-------. 1 atlas atlas    993137 Apr 26 11:35 agis_schedconf.cvmfs.json
2025-04-26 11:35:38 (6412): Guest Log: drwx------. 4 atlas atlas      4096 Apr 26 11:36 pilot3
2025-04-26 11:35:38 (6412): Guest Log: -rw-------. 1 atlas atlas 199193984 Apr 26 18:33 HITS.44270670._007731.pool.root.1
2025-04-26 11:35:38 (6412): Guest Log: -rw-------. 1 atlas atlas      1039 Apr 26 18:34 memory_monitor_summary.json
2025-04-26 11:35:38 (6412): Guest Log: -rw-------. 1 atlas atlas   1596659 Apr 26 18:34 agis_ddmendpoints.agis.ALL.json
2025-04-26 11:35:38 (6412): Guest Log: -rw-------. 1 atlas atlas    432998 Apr 26 18:34 log.44270670._007731.job.log.tgz.1
2025-04-26 11:35:38 (6412): Guest Log: -rw-------. 1 atlas atlas        95 Apr 26 18:35 pilot_heartbeat.json
2025-04-26 11:35:38 (6412): Guest Log: -rw-------. 1 atlas atlas      7747 Apr 26 18:35 heartbeat.json
2025-04-26 11:35:38 (6412): Guest Log: -rw-------. 1 atlas atlas      4536 Apr 26 18:35 pilotlog.txt
2025-04-26 11:35:38 (6412): Guest Log: -rw-------. 1 atlas atlas   1567445 Apr 26 18:35 log.44270670._007731.job.log.1
2025-04-26 11:35:38 (6412): Guest Log: -rw-------. 1 atlas atlas       357 Apr 26 18:35 output.list
2025-04-26 11:35:38 (6412): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 26 18:35 runtime_log
2025-04-26 11:35:38 (6412): Guest Log: -rw-------. 1 atlas atlas   2017280 Apr 26 18:35 result.tar.gz
2025-04-26 11:35:38 (6412): Guest Log: -rw-r--r--. 1 atlas atlas     10954 Apr 26 18:35 runtime_log.err
2025-04-26 11:35:39 (6412): Guest Log: -rw-------. 1 atlas atlas       664 Apr 26 18:35 NC8NDmRyeS7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmWwoLDmc0dzOn.diag
2025-04-26 11:35:39 (6412): Guest Log: Looking for outputfile HITS.44270670._007731.pool.root.1
2025-04-26 11:35:39 (6412): Guest Log: HITS file was successfully produced
2025-04-26 11:35:39 (6412): Guest Log: -rw-------. 1 atlas atlas 199193984 Apr 26 18:33 /home/atlas/RunAtlas/HITS.44270670._007731.pool.root.1
2025-04-26 11:35:41 (6412): Guest Log: Successfully finished the ATLAS job!
2025-04-26 11:35:41 (6412): Guest Log: Copying the results back to the shared directory!
2025-04-26 11:35:41 (6412): Guest Log:  *** Contents of shared directory: ***
2025-04-26 11:35:41 (6412): Guest Log: total 408656
2025-04-26 11:35:41 (6412): Guest Log: -rwxrwxrwx. 1 root root 216699299 Apr 26 11:29 ATLAS.root_0
2025-04-26 11:35:41 (6412): Guest Log: -rwxrwxrwx. 1 root root 199193984 Apr 26  2025 HITS.pool.root.1
2025-04-26 11:35:41 (6412): Guest Log: -rwxrwxrwx. 1 root root      8614 Apr 26 11:29 init_data.xml
2025-04-26 11:35:41 (6412): Guest Log: -rwxrwxrwx. 1 root root    508865 Apr 25 21:22 input.tar.gz
2025-04-26 11:35:41 (6412): Guest Log: -rwxrwxrwx. 1 root root   2017280 Apr 26  2025 result.tar.gz
2025-04-26 11:35:41 (6412): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 25 21:22 start_atlas.sh
2025-04-26 11:35:41 (6412): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-26 11:35:41 (6412): VM Completion File Detected.
2025-04-26 11:35:41 (6412): Powering off VM.
2025-04-26 11:35:42 (6412): Successfully stopped VM.
2025-04-26 11:35:42 (6412): Deregistering VM. (boinc_8b3f3212feb44635, slot#4)
2025-04-26 11:35:42 (6412): Removing network bandwidth throttle group from VM.
2025-04-26 11:35:42 (6412): Removing VM from VirtualBox.
11:35:48 (6412): called boinc_finish(0)

</stderr_txt>
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