Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-25 12:44:00 (14392): Detected: vboxwrapper 26206
2025-04-25 12:44:00 (14392): Detected: BOINC client v8.0.4
2025-04-25 12:44:01 (14392): Detected: VirtualBox VboxManage Interface (Version: 7.0.24)
2025-04-25 12:44:01 (14392): Successfully copied 'init_data.xml' to the shared directory.
2025-04-25 12:44:01 (14392): Create VM. (boinc_41382c2d683bb15e, slot#3)
2025-04-25 12:44:02 (14392): Setting Memory Size for VM. (4400MB)
2025-04-25 12:44:02 (14392): Setting CPU Count for VM. (4)
2025-04-25 12:44:02 (14392): Setting Chipset Options for VM.
2025-04-25 12:44:03 (14392): Setting Graphics Controller Options for VM.
2025-04-25 12:44:03 (14392): Setting Boot Options for VM.
2025-04-25 12:44:03 (14392): Setting Network Configuration for NAT.
2025-04-25 12:44:03 (14392): Enabling VM Network Access.
2025-04-25 12:44:04 (14392): Disabling USB Support for VM.
2025-04-25 12:44:04 (14392): Disabling COM Port Support for VM.
2025-04-25 12:44:04 (14392): Disabling LPT Port Support for VM.
2025-04-25 12:44:04 (14392): Disabling Audio Support for VM.
2025-04-25 12:44:05 (14392): Disabling Clipboard Support for VM.
2025-04-25 12:44:05 (14392): Disabling Drag and Drop Support for VM.
2025-04-25 12:44:05 (14392): Adding storage controller(s) to VM.
2025-04-25 12:44:05 (14392): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-25 12:44:06 (14392): Adding VirtualBox Guest Additions to VM.
2025-04-25 12:44:06 (14392): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-25 12:44:06 (14392): forwarding host port 55490 to guest port 80
2025-04-25 12:44:07 (14392): Enabling remote desktop for VM.
2025-04-25 12:44:07 (14392): Required extension pack not installed, remote desktop not enabled.
2025-04-25 12:44:07 (14392): Enabling shared directory for VM.
2025-04-25 12:44:07 (14392): Starting VM using VBoxManage interface. (boinc_41382c2d683bb15e, slot#3)
2025-04-25 12:44:12 (14392): Successfully started VM. (PID = '4300')
2025-04-25 12:44:12 (14392): Reporting VM Process ID to BOINC.
2025-04-25 12:44:12 (14392): Guest Log: BIOS: VirtualBox 7.0.24
2025-04-25 12:44:12 (14392): Guest Log: CPUID EDX: 0x178bfbff
2025-04-25 12:44:12 (14392): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-25 12:44:12 (14392): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-25 12:44:12 (14392): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-25 12:44:12 (14392): Detected: Web Application Enabled (http://localhost:55490)
2025-04-25 12:44:12 (14392): Preference change detected
2025-04-25 12:44:12 (14392): Setting CPU throttle for VM. (100%)
2025-04-25 12:44:12 (14392): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-25 12:44:14 (14392): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-25 12:44:14 (14392): Guest Log: BIOS: Booting from Hard Disk...
2025-04-25 12:44:16 (14392): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-25 12:44:16 (14392): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-25 12:44:16 (14392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-25 12:44:16 (14392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-25 12:44:16 (14392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-25 12:44:16 (14392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-25 12:44:16 (14392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-25 12:44:16 (14392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-25 12:44:16 (14392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-25 12:44:16 (14392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-25 12:44:16 (14392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-25 12:44:16 (14392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-25 12:44:16 (14392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-25 12:44:16 (14392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-25 12:44:16 (14392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-25 12:44:16 (14392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-25 12:44:16 (14392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-25 12:44:16 (14392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-25 12:44:16 (14392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-25 12:44:16 (14392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-25 12:44:16 (14392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-25 12:44:16 (14392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-25 12:44:16 (14392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-25 12:44:16 (14392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-25 12:44:16 (14392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-25 12:44:16 (14392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-25 12:44:16 (14392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-25 12:44:16 (14392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-25 12:44:16 (14392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-25 12:44:16 (14392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-25 12:44:16 (14392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-25 12:44:16 (14392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-25 12:44:24 (14392): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-25 12:44:24 (14392): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-25 12:44:31 (14392): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-25 12:44:31 (14392): Guest Log: 00:00:00.000156 main     Log opened 2025-04-25T12:44:29.004322000Z
2025-04-25 12:44:31 (14392): Guest Log: 00:00:00.000253 main     OS Product: Linux
2025-04-25 12:44:31 (14392): Guest Log: 00:00:00.000284 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-25 12:44:31 (14392): Guest Log: 00:00:00.000310 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-25 12:44:31 (14392): Guest Log: 00:00:00.000336 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-25 12:44:31 (14392): Guest Log: 00:00:00.000336 main     Process ID: 1302
2025-04-25 12:44:31 (14392): Guest Log: 00:00:00.000337 main     Package type: LINUX_64BITS_GENERIC
2025-04-25 12:44:31 (14392): Guest Log: 00:00:00.003434 main     5.2.32 r132073 started. Verbose level = 0
2025-04-25 12:44:31 (14392): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-25 12:44:31 (14392): Guest Log: [INFO] Mounting shared directory
2025-04-25 12:44:32 (14392): Guest Log: [INFO] Checking for init_data.xml
2025-04-25 12:44:34 (14392): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-25 12:44:34 (14392): Guest Log: [INFO] Detected branch: prod
2025-04-25 12:44:34 (14392): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-25 12:44:34 (14392): Guest Log: Copying input files
2025-04-25 12:44:35 (14392): Guest Log: Copied input files into RunAtlas.
2025-04-25 12:44:35 (14392): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-25 12:44:35 (14392): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-25 12:44:35 (14392): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-25 12:44:35 (14392): Guest Log: Further information can be found at the LHC@home message board.
2025-04-25 12:44:41 (14392): Guest Log: 00:00:10.009991 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 543 636 000ns (GuestNow=1 745 599 480 554 375 000 ns GuestLast=1 745 585 069 010 739 000 ns fSetTimeLastLoop=true )
2025-04-25 12:44:44 (14392): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-25 12:44:44 (14392): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-25 12:44:44 (14392): Guest Log: 2.6.3.0 1580 0 30180 145271 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-25 12:44:46 (14392): Guest Log: copied the webapp to /var/www
2025-04-25 12:44:46 (14392): Guest Log: ATHENA_PROC_NUMBER=4
2025-04-25 12:44:46 (14392): Guest Log: ATHENA_CORE_NUMBER=4
2025-04-25 12:44:46 (14392): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-25 12:44:46 (14392): Guest Log:  *** Starting ATLAS job. (PandaID=6616021457 taskID=44270670) ***
2025-04-25 14:24:16 (14392): Status Report: Elapsed Time: '6000.000000'
2025-04-25 14:24:16 (14392): Status Report: CPU Time: '15127.562500'
2025-04-25 16:04:20 (14392): Status Report: Elapsed Time: '12000.000000'
2025-04-25 16:04:20 (14392): Status Report: CPU Time: '32435.406250'
2025-04-25 16:45:58 (14392): Guest Log:  *** Job finished ***
2025-04-25 16:45:58 (14392): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-25 16:45:58 (14392): Guest Log: 2025-04-25 20:45:47,990 | INFO     | [payload] validate_post thread has finished
2025-04-25 16:45:58 (14392): Guest Log: 2025-04-25 20:45:48,916 | INFO     | [data] copytool_out thread has finished
2025-04-25 16:45:58 (14392): Guest Log: 2025-04-25 20:45:50,011 | INFO     | [data] queue_monitor thread has finished
2025-04-25 16:45:58 (14392): Guest Log: 2025-04-25 20:45:51,326 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139782360037184)>', '<ExcThread(monitor, started 139781925238528)>']
2025-04-25 16:45:58 (14392): Guest Log: 2025-04-25 20:45:51,330 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-25 16:45:58 (14392): Guest Log: 2025-04-25 20:45:51,330 | INFO     | [monitor] control thread has ended
2025-04-25 16:45:58 (14392): Guest Log: 2025-04-25 20:45:56,331 | INFO     | all workflow threads have been joined
2025-04-25 16:45:58 (14392): Guest Log: 2025-04-25 20:45:56,331 | INFO     | end of generic workflow (traces error code: 0)
2025-04-25 16:45:58 (14392): Guest Log: 2025-04-25 20:45:56,331 | INFO     | traces error code: 0
2025-04-25 16:45:58 (14392): Guest Log: 2025-04-25 20:45:56,331 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-25 16:45:58 (14392): Guest Log: 2025-04-25 20:45:56,415 [wrapper] ==== pilot stdout END ====
2025-04-25 16:45:58 (14392): Guest Log: 2025-04-25 20:45:56,434 [wrapper] ==== wrapper stdout RESUME ====
2025-04-25 16:45:58 (14392): Guest Log: 2025-04-25 20:45:56,449 [wrapper] pilotpid: 5906
2025-04-25 16:45:58 (14392): Guest Log: 2025-04-25 20:45:56,477 [wrapper] Pilot exit status: 0
2025-04-25 16:45:58 (14392): Guest Log: 2025-04-25 20:45:56,620 [wrapper] pandaids: 6616021457
2025-04-25 16:45:58 (14392): Guest Log: 2025-04-25 20:45:56,718 [wrapper] cleanup supervisor_pilot 18684 5907
2025-04-25 16:45:58 (14392): Guest Log: 2025-04-25 20:45:56,737 [wrapper] Test setup, not cleaning
2025-04-25 16:45:58 (14392): Guest Log: 2025-04-25 20:45:56,750 [wrapper] apfmon messages muted
2025-04-25 16:45:58 (14392): Guest Log: 2025-04-25 20:45:56,778 [wrapper] ==== wrapper stdout END ====
2025-04-25 16:45:58 (14392): Guest Log: 2025-04-25 20:45:56,783 [wrapper] ==== wrapper stderr END ====
2025-04-25 16:45:58 (14392): Guest Log:  *** Error codes and diagnostics ***
2025-04-25 16:45:58 (14392): Guest Log:     "exeErrorCode": 0,
2025-04-25 16:45:58 (14392): Guest Log:     "exeErrorDiag": "",
2025-04-25 16:45:58 (14392): Guest Log:     "pilotErrorCode": 0,
2025-04-25 16:45:58 (14392): Guest Log:     "pilotErrorDiag": "",
2025-04-25 16:45:58 (14392): Guest Log:  *** Listing of results directory ***
2025-04-25 16:45:58 (14392): Guest Log: total 193904
2025-04-25 16:45:58 (14392): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 25 05:51 pilot3.tar.gz
2025-04-25 16:45:58 (14392): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 25 06:04 queuedata.json
2025-04-25 16:45:58 (14392): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 25 06:05 runpilot2-wrapper.sh
2025-04-25 16:45:58 (14392): Guest Log: -rwxr-xr-x. 1 atlas atlas     15521 Apr 25 16:44 init_data.xml
2025-04-25 16:45:58 (14392): Guest Log: -rwxr-xr-x. 1 atlas atlas    508867 Apr 25 16:44 input.tar.gz
2025-04-25 16:45:58 (14392): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr 25 16:44 start_atlas.sh
2025-04-25 16:45:58 (14392): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 25 16:44 EVNT.44270667._000113.pool.root.1 -> /data/./ATLAS.root_0
2025-04-25 16:45:58 (14392): Guest Log: -rw-r--r--. 1 atlas atlas      2484 Apr 25 16:44 pandaJob.out
2025-04-25 16:45:58 (14392): Guest Log: -rw-------. 1 atlas atlas       424 Apr 25 16:44 setup.sh.local
2025-04-25 16:45:58 (14392): Guest Log: -rw-------. 1 atlas atlas    993374 Apr 25 16:45 agis_schedconf.cvmfs.json
2025-04-25 16:45:58 (14392): Guest Log: drwx------. 4 atlas atlas      4096 Apr 25 16:45 pilot3
2025-04-25 16:45:58 (14392): Guest Log: -rw-------. 1 atlas atlas        95 Apr 25 20:44 pilot_heartbeat.json
2025-04-25 16:45:58 (14392): Guest Log: -rw-------. 1 atlas atlas 191704947 Apr 25 20:44 HITS.44270670._002997.pool.root.1
2025-04-25 16:45:58 (14392): Guest Log: -rw-------. 1 atlas atlas      1029 Apr 25 20:45 memory_monitor_summary.json
2025-04-25 16:45:58 (14392): Guest Log: -rw-------. 1 atlas atlas   1596659 Apr 25 20:45 agis_ddmendpoints.agis.ALL.json
2025-04-25 16:45:58 (14392): Guest Log: -rw-------. 1 atlas atlas    337614 Apr 25 20:45 log.44270670._002997.job.log.tgz.1
2025-04-25 16:45:58 (14392): Guest Log: -rw-------. 1 atlas atlas      7715 Apr 25 20:45 heartbeat.json
2025-04-25 16:45:58 (14392): Guest Log: -rw-------. 1 atlas atlas      4413 Apr 25 20:45 pilotlog.txt
2025-04-25 16:45:58 (14392): Guest Log: -rw-------. 1 atlas atlas   1201381 Apr 25 20:45 log.44270670._002997.job.log.1
2025-04-25 16:45:58 (14392): Guest Log: -rw-------. 1 atlas atlas       357 Apr 25 20:45 output.list
2025-04-25 16:45:58 (14392): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 25 20:45 runtime_log
2025-04-25 16:45:58 (14392): Guest Log: -rw-------. 1 atlas atlas   1556480 Apr 25 20:45 result.tar.gz
2025-04-25 16:45:58 (14392): Guest Log: -rw-r--r--. 1 atlas atlas     10912 Apr 25 20:45 runtime_log.err
2025-04-25 16:45:58 (14392): Guest Log: -rw-------. 1 atlas atlas       649 Apr 25 20:45 gO3MDmqMRS7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmYN9KDmQ4m1Bo.diag
2025-04-25 16:45:58 (14392): Guest Log: Looking for outputfile HITS.44270670._002997.pool.root.1
2025-04-25 16:45:58 (14392): Guest Log: HITS file was successfully produced
2025-04-25 16:45:58 (14392): Guest Log: -rw-------. 1 atlas atlas 191704947 Apr 25 20:44 /home/atlas/RunAtlas/HITS.44270670._002997.pool.root.1
2025-04-25 16:45:59 (14392): Guest Log: Successfully finished the ATLAS job!
2025-04-25 16:45:59 (14392): Guest Log: Copying the results back to the shared directory!
2025-04-25 16:45:59 (14392): Guest Log:  *** Contents of shared directory: ***
2025-04-25 16:46:00 (14392): Guest Log: total 396484
2025-04-25 16:46:00 (14392): Guest Log: -rwxrwxrwx. 1 root root 212186453 Apr 25 16:44 ATLAS.root_0
2025-04-25 16:46:00 (14392): Guest Log: -rwxrwxrwx. 1 root root 191704947 Apr 25 20:45 HITS.pool.root.1
2025-04-25 16:46:00 (14392): Guest Log: -rwxrwxrwx. 1 root root     15521 Apr 25 16:44 init_data.xml
2025-04-25 16:46:00 (14392): Guest Log: -rwxrwxrwx. 1 root root    508867 Apr 25 16:43 input.tar.gz
2025-04-25 16:46:00 (14392): Guest Log: -rwxrwxrwx. 1 root root   1556480 Apr 25 20:45 result.tar.gz
2025-04-25 16:46:00 (14392): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 25 16:43 start_atlas.sh
2025-04-25 16:46:00 (14392): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-25 16:46:00 (14392): VM Completion File Detected.
2025-04-25 16:46:00 (14392): Powering off VM.
2025-04-25 16:46:01 (14392): Successfully stopped VM.
2025-04-25 16:46:01 (14392): Deregistering VM. (boinc_41382c2d683bb15e, slot#3)
2025-04-25 16:46:01 (14392): Removing network bandwidth throttle group from VM.
2025-04-25 16:46:01 (14392): Removing VM from VirtualBox.
16:46:06 (14392): called boinc_finish(0)

</stderr_txt>
]]>

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