Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-25 05:11:06 (1111598): Detected: vboxwrapper 26206
2025-04-25 05:11:06 (1111598): Detected: BOINC client v8.0.2
2025-04-25 05:11:06 (1111598): Detected: VirtualBox VboxManage Interface (Version: 6.1.50)
2025-04-25 05:11:06 (1111598): Successfully copied 'init_data.xml' to the shared directory.
2025-04-25 05:11:06 (1111598): Create VM. (boinc_64d60c57292cda57, slot#2)
2025-04-25 05:11:07 (1111598): Setting Memory Size for VM. (4300MB)
2025-04-25 05:11:07 (1111598): Setting CPU Count for VM. (3)
2025-04-25 05:11:07 (1111598): Setting Chipset Options for VM.
2025-04-25 05:11:07 (1111598): Setting Graphics Controller Options for VM.
2025-04-25 05:11:07 (1111598): Setting Boot Options for VM.
2025-04-25 05:11:08 (1111598): Setting Network Configuration for NAT.
2025-04-25 05:11:08 (1111598): Enabling VM Network Access.
2025-04-25 05:11:08 (1111598): Disabling USB Support for VM.
2025-04-25 05:11:08 (1111598): Disabling COM Port Support for VM.
2025-04-25 05:11:08 (1111598): Disabling LPT Port Support for VM.
2025-04-25 05:11:08 (1111598): Disabling Audio Support for VM.
2025-04-25 05:11:08 (1111598): Disabling Clipboard Support for VM.
2025-04-25 05:11:09 (1111598): Disabling Drag and Drop Support for VM.
2025-04-25 05:11:09 (1111598): Adding storage controller(s) to VM.
2025-04-25 05:11:09 (1111598): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-25 05:11:10 (1111598): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-25 05:11:10 (1111598): forwarding host port 33211 to guest port 80
2025-04-25 05:11:10 (1111598): Enabling remote desktop for VM.
2025-04-25 05:11:11 (1111598): Enabling shared directory for VM.
2025-04-25 05:11:11 (1111598): Starting VM using VBoxManage interface. (boinc_64d60c57292cda57, slot#2)
2025-04-25 05:11:12 (1111598): Successfully started VM. (PID = '1112018')
2025-04-25 05:11:12 (1111598): Reporting VM Process ID to BOINC.
2025-04-25 05:11:12 (1111598): Guest Log: BIOS: VirtualBox 6.1.50
2025-04-25 05:11:12 (1111598): Guest Log: CPUID EDX: 0x178bfbff
2025-04-25 05:11:12 (1111598): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-25 05:11:12 (1111598): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-25 05:11:12 (1111598): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-25 05:11:12 (1111598): Detected: Web Application Enabled (http://localhost:33211)
2025-04-25 05:11:12 (1111598): Detected: Remote Desktop Enabled (localhost:34603)
2025-04-25 05:11:12 (1111598): Preference change detected
2025-04-25 05:11:12 (1111598): Setting CPU throttle for VM. (80%)
2025-04-25 05:11:13 (1111598): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-25 05:11:14 (1111598): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-25 05:11:14 (1111598): Guest Log: BIOS: Booting from Hard Disk...
2025-04-25 05:11:18 (1111598): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-25 05:11:18 (1111598): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-25 05:11:18 (1111598): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-25 05:11:18 (1111598): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-25 05:11:18 (1111598): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-25 05:11:18 (1111598): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-25 05:11:18 (1111598): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-25 05:11:18 (1111598): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-25 05:11:18 (1111598): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-25 05:11:18 (1111598): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-25 05:11:18 (1111598): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-25 05:11:18 (1111598): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-25 05:11:18 (1111598): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-25 05:11:18 (1111598): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-25 05:11:18 (1111598): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-25 05:11:18 (1111598): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-25 05:11:18 (1111598): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-25 05:11:18 (1111598): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-25 05:11:18 (1111598): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-25 05:11:18 (1111598): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-25 05:11:18 (1111598): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-25 05:11:18 (1111598): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-25 05:11:18 (1111598): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-25 05:11:18 (1111598): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-25 05:11:18 (1111598): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-25 05:11:18 (1111598): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-25 05:11:18 (1111598): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-25 05:11:18 (1111598): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-25 05:11:18 (1111598): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-25 05:11:18 (1111598): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-25 05:11:18 (1111598): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-25 05:11:18 (1111598): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-25 05:11:33 (1111598): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-25 05:11:33 (1111598): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-25 05:11:53 (1111598): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-25 05:11:53 (1111598): Guest Log: 00:00:00.000403 main     Log opened 2025-04-25T05:11:51.271474000Z
2025-04-25 05:11:53 (1111598): Guest Log: 00:00:00.000694 main     OS Product: Linux
2025-04-25 05:11:53 (1111598): Guest Log: 00:00:00.000755 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-25 05:11:53 (1111598): Guest Log: 00:00:00.000806 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-25 05:11:53 (1111598): Guest Log: 00:00:00.000857 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-25 05:11:53 (1111598): Guest Log: 00:00:00.000859 main     Process ID: 1282
2025-04-25 05:11:53 (1111598): Guest Log: 00:00:00.000859 main     Package type: LINUX_64BITS_GENERIC
2025-04-25 05:11:53 (1111598): Guest Log: 00:00:00.003450 main     5.2.32 r132073 started. Verbose level = 0
2025-04-25 05:11:54 (1111598): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-25 05:11:54 (1111598): Guest Log: [INFO] Mounting shared directory
2025-04-25 05:11:54 (1111598): Guest Log: [INFO] Checking for init_data.xml
2025-04-25 05:12:16 (1111598): VM state change detected. (old = 'running', new = 'paused')
2025-04-25 05:12:36 (1111598): VM state change detected. (old = 'paused', new = 'running')
2025-04-25 05:12:53 (1111598): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-25 05:12:53 (1111598): Guest Log: [INFO] Detected branch: prod
2025-04-25 05:12:58 (1111598): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-25 05:12:58 (1111598): Guest Log: Copying input files
2025-04-25 05:13:00 (1111598): Guest Log: Copied input files into RunAtlas.
2025-04-25 05:13:00 (1111598): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-25 05:13:00 (1111598): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-25 05:13:00 (1111598): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-25 05:13:00 (1111598): Guest Log: Further information can be found at the LHC@home message board.
2025-04-25 05:13:43 (1111598): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-25 05:13:47 (1111598): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-25 05:13:47 (1111598): Guest Log: 2.6.3.0 1580 1 32372 145250 4 1 3119946 4096000 0 65024 0 0 n/a 1171 76 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-25 05:13:52 (1111598): Guest Log: copied the webapp to /var/www
2025-04-25 05:13:52 (1111598): Guest Log: ATHENA_PROC_NUMBER=3
2025-04-25 05:13:52 (1111598): Guest Log: ATHENA_CORE_NUMBER=3
2025-04-25 05:13:56 (1111598): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-25 05:13:56 (1111598): Guest Log:  *** Starting ATLAS job. (PandaID=6615977538 taskID=44270670) ***
2025-04-25 06:50:34 (1111598): Status Report: Elapsed Time: '6000.000000'
2025-04-25 06:50:34 (1111598): Status Report: CPU Time: '10577.800000'
2025-04-25 08:29:34 (1111598): Status Report: Elapsed Time: '12000.000000'
2025-04-25 08:29:34 (1111598): Status Report: CPU Time: '24734.520000'
2025-04-25 10:08:35 (1111598): Status Report: Elapsed Time: '18000.000000'
2025-04-25 10:08:35 (1111598): Status Report: CPU Time: '38890.010000'
2025-04-25 11:47:35 (1111598): Status Report: Elapsed Time: '24000.000000'
2025-04-25 11:47:35 (1111598): Status Report: CPU Time: '53039.500000'
2025-04-25 13:26:36 (1111598): Status Report: Elapsed Time: '30000.000000'
2025-04-25 13:26:36 (1111598): Status Report: CPU Time: '67186.360000'
2025-04-25 15:05:37 (1111598): Status Report: Elapsed Time: '36000.000000'
2025-04-25 15:05:37 (1111598): Status Report: CPU Time: '81336.000000'
2025-04-25 15:49:58 (1111598): VM state change detected. (old = 'running', new = 'paused')
2025-04-25 15:50:15 (1111598): VM state change detected. (old = 'paused', new = 'running')
2025-04-25 16:44:59 (1111598): Status Report: Elapsed Time: '42000.000000'
2025-04-25 16:44:59 (1111598): Status Report: CPU Time: '95499.840000'
2025-04-25 17:23:50 (1111598): Guest Log:  *** Job finished ***
2025-04-25 17:23:50 (1111598): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-25 17:23:51 (1111598): Guest Log: 2025-04-25 17:23:25,847 | INFO     | [payload] validate_post thread has finished
2025-04-25 17:23:51 (1111598): Guest Log: 2025-04-25 17:23:25,854 | INFO     | [job] control thread has finished
2025-04-25 17:23:51 (1111598): Guest Log: 2025-04-25 17:23:27,431 | INFO     | [data] queue_monitor thread has finished
2025-04-25 17:23:51 (1111598): Guest Log: 2025-04-25 17:23:28,442 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140676461606720)>', '<ExcThread(monitor, started 140675790128896)>']
2025-04-25 17:23:51 (1111598): Guest Log: 2025-04-25 17:23:28,812 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-25 17:23:51 (1111598): Guest Log: 2025-04-25 17:23:28,813 | INFO     | [monitor] control thread has ended
2025-04-25 17:23:51 (1111598): Guest Log: 2025-04-25 17:23:33,454 | INFO     | all workflow threads have been joined
2025-04-25 17:23:51 (1111598): Guest Log: 2025-04-25 17:23:33,455 | INFO     | end of generic workflow (traces error code: 0)
2025-04-25 17:23:51 (1111598): Guest Log: 2025-04-25 17:23:33,457 | INFO     | traces error code: 0
2025-04-25 17:23:51 (1111598): Guest Log: 2025-04-25 17:23:33,458 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-25 17:23:51 (1111598): Guest Log: 2025-04-25 17:23:34,126 [wrapper] ==== pilot stdout END ====
2025-04-25 17:23:51 (1111598): Guest Log: 2025-04-25 17:23:34,155 [wrapper] ==== wrapper stdout RESUME ====
2025-04-25 17:23:51 (1111598): Guest Log: 2025-04-25 17:23:34,179 [wrapper] pilotpid: 5923
2025-04-25 17:23:51 (1111598): Guest Log: 2025-04-25 17:23:34,190 [wrapper] Pilot exit status: 0
2025-04-25 17:23:51 (1111598): Guest Log: 2025-04-25 17:23:34,321 [wrapper] pandaids: 6615977538
2025-04-25 17:23:51 (1111598): Guest Log: 2025-04-25 17:23:34,388 [wrapper] cleanup supervisor_pilot 23777 5924
2025-04-25 17:23:51 (1111598): Guest Log: 2025-04-25 17:23:34,402 [wrapper] Test setup, not cleaning
2025-04-25 17:23:51 (1111598): Guest Log: 2025-04-25 17:23:34,413 [wrapper] apfmon messages muted
2025-04-25 17:23:51 (1111598): Guest Log: 2025-04-25 17:23:34,425 [wrapper] ==== wrapper stdout END ====
2025-04-25 17:23:51 (1111598): Guest Log: 2025-04-25 17:23:34,436 [wrapper] ==== wrapper stderr END ====
2025-04-25 17:23:51 (1111598): Guest Log:  *** Error codes and diagnostics ***
2025-04-25 17:23:51 (1111598): Guest Log:     "exeErrorCode": 0,
2025-04-25 17:23:51 (1111598): Guest Log:     "exeErrorDiag": "",
2025-04-25 17:23:51 (1111598): Guest Log:     "pilotErrorCode": 0,
2025-04-25 17:23:51 (1111598): Guest Log:     "pilotErrorDiag": "",
2025-04-25 17:23:51 (1111598): Guest Log:  *** Listing of results directory ***
2025-04-25 17:23:51 (1111598): Guest Log: total 207432
2025-04-25 17:23:51 (1111598): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 25 03:43 pilot3.tar.gz
2025-04-25 17:23:51 (1111598): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 25 04:31 queuedata.json
2025-04-25 17:23:51 (1111598): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 25 04:31 runpilot2-wrapper.sh
2025-04-25 17:23:51 (1111598): Guest Log: -rw-r--r--. 1 atlas atlas      6463 Apr 25 05:12 init_data.xml
2025-04-25 17:23:51 (1111598): Guest Log: -rw-r--r--. 1 atlas atlas     17569 Apr 25 05:12 start_atlas.sh
2025-04-25 17:23:51 (1111598): Guest Log: -rw-r--r--. 1 atlas atlas    508865 Apr 25 05:12 input.tar.gz
2025-04-25 17:23:51 (1111598): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 25 05:12 EVNT.44270667._000085.pool.root.1 -> /data/./ATLAS.root_0
2025-04-25 17:23:51 (1111598): Guest Log: -rw-r--r--. 1 atlas atlas      2484 Apr 25 05:13 pandaJob.out
2025-04-25 17:23:51 (1111598): Guest Log: -rw-------. 1 atlas atlas       424 Apr 25 05:13 setup.sh.local
2025-04-25 17:23:51 (1111598): Guest Log: -rw-------. 1 atlas atlas    990277 Apr 25 05:16 agis_schedconf.cvmfs.json
2025-04-25 17:23:51 (1111598): Guest Log: drwx------. 4 atlas atlas      4096 Apr 25 05:17 pilot3
2025-04-25 17:23:51 (1111598): Guest Log: -rw-------. 1 atlas atlas 200891478 Apr 25 17:21 HITS.44270670._001416.pool.root.1
2025-04-25 17:23:51 (1111598): Guest Log: -rw-------. 1 atlas atlas      1027 Apr 25 17:21 memory_monitor_summary.json
2025-04-25 17:23:51 (1111598): Guest Log: -rw-------. 1 atlas atlas   1602246 Apr 25 17:22 agis_ddmendpoints.agis.ALL.json
2025-04-25 17:23:51 (1111598): Guest Log: -rw-------. 1 atlas atlas    546752 Apr 25 17:22 log.44270670._001416.job.log.tgz.1
2025-04-25 17:23:51 (1111598): Guest Log: -rw-------. 1 atlas atlas        95 Apr 25 17:23 pilot_heartbeat.json
2025-04-25 17:23:51 (1111598): Guest Log: -rw-------. 1 atlas atlas      7714 Apr 25 17:23 heartbeat.json
2025-04-25 17:23:51 (1111598): Guest Log: -rw-------. 1 atlas atlas      4413 Apr 25 17:23 pilotlog.txt
2025-04-25 17:23:51 (1111598): Guest Log: -rw-------. 1 atlas atlas   3325925 Apr 25 17:23 log.44270670._001416.job.log.1
2025-04-25 17:23:51 (1111598): Guest Log: -rw-------. 1 atlas atlas       357 Apr 25 17:23 output.list
2025-04-25 17:23:51 (1111598): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 25 17:23 runtime_log
2025-04-25 17:23:51 (1111598): Guest Log: -rw-------. 1 atlas atlas   3891200 Apr 25 17:23 result.tar.gz
2025-04-25 17:23:51 (1111598): Guest Log: -rw-r--r--. 1 atlas atlas     10942 Apr 25 17:23 runtime_log.err
2025-04-25 17:23:51 (1111598): Guest Log: -rw-------. 1 atlas atlas       661 Apr 25 17:23 BYsNDmOuPS7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmQInLDmG8yEQo.diag
2025-04-25 17:23:51 (1111598): Guest Log: Looking for outputfile HITS.44270670._001416.pool.root.1
2025-04-25 17:23:51 (1111598): Guest Log: HITS file was successfully produced
2025-04-25 17:23:51 (1111598): Guest Log: -rw-------. 1 atlas atlas 200891478 Apr 25 17:21 /home/atlas/RunAtlas/HITS.44270670._001416.pool.root.1
2025-04-25 17:23:52 (1111598): Guest Log: Successfully finished the ATLAS job!
2025-04-25 17:23:52 (1111598): Guest Log: Copying the results back to the shared directory!
2025-04-25 17:23:52 (1111598): Guest Log:  *** Contents of shared directory: ***
2025-04-25 17:23:52 (1111598): Guest Log: total 215072
2025-04-25 17:23:52 (1111598): Guest Log: -rw-r--r--. 1 root root 215793836 Apr 25 05:11 ATLAS.root_0
2025-04-25 17:23:52 (1111598): Guest Log: -rw-r--r--. 1 root root      6463 Apr 25 05:11 init_data.xml
2025-04-25 17:23:52 (1111598): Guest Log: -rw-r--r--. 1 root root    508865 Apr 25 05:11 input.tar.gz
2025-04-25 17:23:52 (1111598): Guest Log: -rw-r--r--. 1 root root   3891200 Apr 25  2025 result.tar.gz
2025-04-25 17:23:52 (1111598): Guest Log: -rw-r--r--. 1 root root     17569 Apr 25 05:11 start_atlas.sh
2025-04-25 17:23:52 (1111598): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-25 17:23:52 (1111598): VM Completion File Detected.
2025-04-25 17:23:52 (1111598): Powering off VM.
2025-04-25 17:23:57 (1111598): Successfully stopped VM.
2025-04-25 17:23:57 (1111598): Deregistering VM. (boinc_64d60c57292cda57, slot#2)
2025-04-25 17:23:57 (1111598): Removing network bandwidth throttle group from VM.
2025-04-25 17:23:57 (1111598): Removing VM from VirtualBox.
17:24:02 (1111598): called boinc_finish(0)

</stderr_txt>
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