Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-24 17:55:01 (4836): Detected: vboxwrapper 26206
2025-04-24 17:55:01 (4836): Detected: BOINC client v8.0.2
2025-04-24 17:55:01 (4836): Detected: VirtualBox VboxManage Interface (Version: 6.1.12)
2025-04-24 17:55:02 (4836): Successfully copied 'init_data.xml' to the shared directory.
2025-04-24 17:55:02 (4836): Create VM. (boinc_36f37c7dd2ac0e81, slot#3)
2025-04-24 17:55:03 (4836): Setting Memory Size for VM. (4200MB)
2025-04-24 17:55:03 (4836): Setting CPU Count for VM. (2)
2025-04-24 17:55:03 (4836): Setting Chipset Options for VM.
2025-04-24 17:55:04 (4836): Setting Graphics Controller Options for VM.
2025-04-24 17:55:04 (4836): Setting Boot Options for VM.
2025-04-24 17:55:04 (4836): Setting Network Configuration for NAT.
2025-04-24 17:55:04 (4836): Enabling VM Network Access.
2025-04-24 17:55:05 (4836): Disabling USB Support for VM.
2025-04-24 17:55:05 (4836): Disabling COM Port Support for VM.
2025-04-24 17:55:05 (4836): Disabling LPT Port Support for VM.
2025-04-24 17:55:05 (4836): Disabling Audio Support for VM.
2025-04-24 17:55:06 (4836): Disabling Clipboard Support for VM.
2025-04-24 17:55:06 (4836): Disabling Drag and Drop Support for VM.
2025-04-24 17:55:06 (4836): Adding storage controller(s) to VM.
2025-04-24 17:55:06 (4836): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-24 17:55:07 (4836): Adding VirtualBox Guest Additions to VM.
2025-04-24 17:55:08 (4836): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-24 17:55:08 (4836): forwarding host port 57464 to guest port 80
2025-04-24 17:55:08 (4836): Enabling remote desktop for VM.
2025-04-24 17:55:08 (4836): Required extension pack not installed, remote desktop not enabled.
2025-04-24 17:55:08 (4836): Enabling shared directory for VM.
2025-04-24 17:55:09 (4836): Starting VM using VBoxManage interface. (boinc_36f37c7dd2ac0e81, slot#3)
2025-04-24 17:55:13 (4836): Successfully started VM. (PID = '15244')
2025-04-24 17:55:13 (4836): Reporting VM Process ID to BOINC.
2025-04-24 17:55:13 (4836): Guest Log: BIOS: VirtualBox 6.1.12
2025-04-24 17:55:13 (4836): Guest Log: CPUID EDX: 0x178bfbff
2025-04-24 17:55:13 (4836): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-24 17:55:13 (4836): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-24 17:55:13 (4836): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-24 17:55:13 (4836): Detected: Web Application Enabled (http://localhost:57464)
2025-04-24 17:55:13 (4836): Preference change detected
2025-04-24 17:55:13 (4836): Setting CPU throttle for VM. (100%)
2025-04-24 17:55:13 (4836): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-24 17:55:15 (4836): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-24 17:55:15 (4836): Guest Log: BIOS: Booting from Hard Disk...
2025-04-24 17:55:18 (4836): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-24 17:55:18 (4836): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-24 17:55:18 (4836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-24 17:55:18 (4836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-24 17:55:18 (4836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-24 17:55:18 (4836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-24 17:55:18 (4836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-24 17:55:18 (4836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-24 17:55:18 (4836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-24 17:55:18 (4836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-24 17:55:18 (4836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-24 17:55:18 (4836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-24 17:55:18 (4836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-24 17:55:18 (4836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-24 17:55:18 (4836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-24 17:55:18 (4836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-24 17:55:18 (4836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-24 17:55:18 (4836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-24 17:55:18 (4836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-24 17:55:18 (4836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-24 17:55:18 (4836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-24 17:55:18 (4836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-24 17:55:18 (4836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-24 17:55:18 (4836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-24 17:55:18 (4836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-24 17:55:18 (4836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-24 17:55:18 (4836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-24 17:55:18 (4836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-24 17:55:18 (4836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-24 17:55:18 (4836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-24 17:55:18 (4836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-24 17:55:18 (4836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-24 17:55:22 (4836): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-24 17:55:22 (4836): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-24 17:55:27 (4836): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-24 17:55:27 (4836): Guest Log: 00:00:00.000167 main     Log opened 2025-04-24T17:55:24.948094000Z
2025-04-24 17:55:27 (4836): Guest Log: 00:00:00.000263 main     OS Product: Linux
2025-04-24 17:55:27 (4836): Guest Log: 00:00:00.000293 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-24 17:55:27 (4836): Guest Log: 00:00:00.000316 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-24 17:55:27 (4836): Guest Log: 00:00:00.000339 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-24 17:55:27 (4836): Guest Log: 00:00:00.000340 main     Process ID: 1262
2025-04-24 17:55:27 (4836): Guest Log: 00:00:00.000340 main     Package type: LINUX_64BITS_GENERIC
2025-04-24 17:55:27 (4836): Guest Log: 00:00:00.000909 main     5.2.32 r132073 started. Verbose level = 0
2025-04-24 17:55:27 (4836): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-24 17:55:27 (4836): Guest Log: [INFO] Mounting shared directory
2025-04-24 17:55:27 (4836): Guest Log: [INFO] Checking for init_data.xml
2025-04-24 17:55:37 (4836): Guest Log: 00:00:10.003351 timesync vgsvcTimeSyncWorker: Radical guest time change: 25 211 766 659 000ns (GuestNow=1 745 542 536 716 948 000 ns GuestLast=1 745 517 324 950 289 000 ns fSetTimeLastLoop=true )
2025-04-24 17:55:39 (4836): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-24 17:55:39 (4836): Guest Log: [INFO] Detected branch: prod
2025-04-24 17:55:39 (4836): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-24 17:55:39 (4836): Guest Log: Copying input files
2025-04-24 17:55:40 (4836): Guest Log: Copied input files into RunAtlas.
2025-04-24 17:55:41 (4836): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-24 17:55:41 (4836): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-24 17:55:41 (4836): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-24 17:55:41 (4836): Guest Log: Further information can be found at the LHC@home message board.
2025-04-24 17:55:51 (4836): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-24 17:55:52 (4836): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-24 17:55:52 (4836): Guest Log: 2.6.3.0 1543 0 30176 145243 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-04-24 17:55:54 (4836): Guest Log: copied the webapp to /var/www
2025-04-24 17:55:54 (4836): Guest Log: ATHENA_PROC_NUMBER=2
2025-04-24 17:55:54 (4836): Guest Log: ATHENA_CORE_NUMBER=2
2025-04-24 17:55:54 (4836): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-24 17:55:54 (4836): Guest Log:  *** Starting ATLAS job. (PandaID=6615707580 taskID=43969436) ***
2025-04-24 17:58:12 (4836): VM state change detected. (old = 'running', new = 'paused')
2025-04-24 17:58:31 (4836): VM state change detected. (old = 'paused', new = 'running')
2025-04-24 18:00:44 (4836): Guest Log:  *** Job finished ***
2025-04-24 18:00:44 (4836): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-24 18:00:44 (4836): Guest Log: 2025-04-25 01:00:13,946 | INFO     | [job] control thread has finished
2025-04-24 18:00:44 (4836): Guest Log: 2025-04-25 01:00:13,951 | INFO     | [data] copytool_out thread has finished
2025-04-24 18:00:44 (4836): Guest Log: 2025-04-25 01:00:17,781 | INFO     | [data] queue_monitor thread has finished
2025-04-24 18:00:44 (4836): Guest Log: 2025-04-25 01:00:19,460 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140292160931648)>', '<ExcThread(monitor, started 140291709314816)>']
2025-04-24 18:00:44 (4836): Guest Log: 2025-04-25 01:00:19,973 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-24 18:00:44 (4836): Guest Log: 2025-04-25 01:00:19,973 | INFO     | [monitor] control thread has ended
2025-04-24 18:00:44 (4836): Guest Log: 2025-04-25 01:00:24,466 | INFO     | all workflow threads have been joined
2025-04-24 18:00:44 (4836): Guest Log: 2025-04-25 01:00:24,467 | INFO     | end of generic workflow (traces error code: 0)
2025-04-24 18:00:44 (4836): Guest Log: 2025-04-25 01:00:24,467 | INFO     | traces error code: 0
2025-04-24 18:00:44 (4836): Guest Log: 2025-04-25 01:00:24,467 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-24 18:00:44 (4836): Guest Log: 2025-04-25 01:00:24,540 [wrapper] ==== pilot stdout END ====
2025-04-24 18:00:44 (4836): Guest Log: 2025-04-25 01:00:24,544 [wrapper] ==== wrapper stdout RESUME ====
2025-04-24 18:00:44 (4836): Guest Log: 2025-04-25 01:00:24,548 [wrapper] pilotpid: 5851
2025-04-24 18:00:44 (4836): Guest Log: 2025-04-25 01:00:24,552 [wrapper] Pilot exit status: 0
2025-04-24 18:00:44 (4836): Guest Log: 2025-04-25 01:00:25,081 [wrapper] pandaids: 6615707580
2025-04-24 18:00:44 (4836): Guest Log: 2025-04-25 01:00:25,104 [wrapper] cleanup supervisor_pilot  5857 5852
2025-04-24 18:00:44 (4836): Guest Log: 2025-04-25 01:00:25,108 [wrapper] Test setup, not cleaning
2025-04-24 18:00:44 (4836): Guest Log: 2025-04-25 01:00:25,112 [wrapper] apfmon messages muted
2025-04-24 18:00:44 (4836): Guest Log: 2025-04-25 01:00:25,123 [wrapper] ==== wrapper stdout END ====
2025-04-24 18:00:44 (4836): Guest Log: 2025-04-25 01:00:25,127 [wrapper] ==== wrapper stderr END ====
2025-04-24 18:00:44 (4836): Guest Log:  *** Error codes and diagnostics ***
2025-04-24 18:00:44 (4836): Guest Log:     "exeErrorCode": 0,
2025-04-24 18:00:44 (4836): Guest Log:     "exeErrorDiag": "",
2025-04-24 18:00:44 (4836): Guest Log:     "pilotErrorCode": 1305,
2025-04-24 18:00:44 (4836): Guest Log:     "pilotErrorDiag": "Failed to execute payload:/bin/bash: Sim_tf.py: command not found",
2025-04-24 18:00:44 (4836): Guest Log:  *** Listing of results directory ***
2025-04-24 18:00:44 (4836): Guest Log: total 3844
2025-04-24 18:00:44 (4836): Guest Log: -rw-r--r--. 1 atlas atlas  495897 Apr 24 23:51 pilot3.tar.gz
2025-04-24 18:00:44 (4836): Guest Log: -rwx------. 1 atlas atlas   37140 Apr 25 00:22 runpilot2-wrapper.sh
2025-04-24 18:00:44 (4836): Guest Log: -rw-r--r--. 1 atlas atlas    5111 Apr 25 00:22 queuedata.json
2025-04-24 18:00:44 (4836): Guest Log: -rwxr-xr-x. 1 atlas atlas    8899 Apr 25 00:55 init_data.xml
2025-04-24 18:00:44 (4836): Guest Log: -rwxr-xr-x. 1 atlas atlas  509066 Apr 25 00:55 input.tar.gz
2025-04-24 18:00:44 (4836): Guest Log: -rwxr-xr-x. 1 atlas atlas   17569 Apr 25 00:55 start_atlas.sh
2025-04-24 18:00:44 (4836): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Apr 25 00:55 EVNT.43969426._000001.pool.root.1 -> /data/./ATLAS.root_0
2025-04-24 18:00:44 (4836): Guest Log: -rw-r--r--. 1 atlas atlas    2810 Apr 25 00:55 pandaJob.out
2025-04-24 18:00:44 (4836): Guest Log: -rw-------. 1 atlas atlas     424 Apr 25 00:56 setup.sh.local
2025-04-24 18:00:44 (4836): Guest Log: -rw-------. 1 atlas atlas  990285 Apr 25 00:57 agis_schedconf.cvmfs.json
2025-04-24 18:00:44 (4836): Guest Log: -rw-------. 1 atlas atlas 1614441 Apr 25 00:57 agis_ddmendpoints.agis.ALL.json
2025-04-24 18:00:44 (4836): Guest Log: drwx------. 4 atlas atlas    4096 Apr 25 00:57 pilot3
2025-04-24 18:00:44 (4836): Guest Log: -rw-------. 1 atlas atlas     280 Apr 25 00:58 memory_monitor_summary.json
2025-04-24 18:00:44 (4836): Guest Log: -rw-------. 1 atlas atlas    7632 Apr 25 00:58 log.43969436._000081.job.log.tgz.1
2025-04-24 18:00:44 (4836): Guest Log: -rw-------. 1 atlas atlas      95 Apr 25 00:59 pilot_heartbeat.json
2025-04-24 18:00:44 (4836): Guest Log: -rw-------. 1 atlas atlas    2180 Apr 25 01:00 heartbeat.json
2025-04-24 18:00:44 (4836): Guest Log: -rw-------. 1 atlas atlas    4536 Apr 25 01:00 pilotlog.txt
2025-04-24 18:00:44 (4836): Guest Log: -rw-------. 1 atlas atlas   72542 Apr 25 01:00 log.43969436._000081.job.log.1
2025-04-24 18:00:44 (4836): Guest Log: -rw-------. 1 atlas atlas     186 Apr 25 01:00 output.list
2025-04-24 18:00:44 (4836): Guest Log: -rw-r--r--. 1 atlas atlas     620 Apr 25 01:00 runtime_log
2025-04-24 18:00:44 (4836): Guest Log: -rw-------. 1 atlas atlas   92160 Apr 25 01:00 result.tar.gz
2025-04-24 18:00:44 (4836): Guest Log: -rw-r--r--. 1 atlas atlas   10830 Apr 25 01:00 runtime_log.err
2025-04-24 18:00:44 (4836): Guest Log: -rw-------. 1 atlas atlas     654 Apr 25 01:00 aPeNDmf0LS7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmNimLDmvYKH8n.diag
2025-04-24 18:00:44 (4836): Guest Log: Looking for outputfile HITS.43969436._000081.pool.root.1
2025-04-24 18:00:44 (4836): Guest Log: No HITS file was produced
2025-04-24 18:00:44 (4836): Guest Log: Successfully finished the ATLAS job!
2025-04-24 18:00:44 (4836): Guest Log: Copying the results back to the shared directory!
2025-04-24 18:00:44 (4836): Guest Log:  *** Contents of shared directory: ***
2025-04-24 18:00:44 (4836): Guest Log: total 314756
2025-04-24 18:00:44 (4836): Guest Log: -rwxrwxrwx. 1 root root 321671028 Apr 25 00:55 ATLAS.root_0
2025-04-24 18:00:44 (4836): Guest Log: -rwxrwxrwx. 1 root root      8899 Apr 25 00:55 init_data.xml
2025-04-24 18:00:44 (4836): Guest Log: -rwxrwxrwx. 1 root root    509066 Apr 25 00:54 input.tar.gz
2025-04-24 18:00:44 (4836): Guest Log: -rwxrwxrwx. 1 root root     92160 Apr 25  2025 result.tar.gz
2025-04-24 18:00:44 (4836): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 25 00:54 start_atlas.sh
2025-04-24 18:00:44 (4836): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-24 18:00:44 (4836): VM Completion File Detected.
2025-04-24 18:00:44 (4836): Powering off VM.
2025-04-24 18:00:45 (4836): Successfully stopped VM.
2025-04-24 18:00:45 (4836): Deregistering VM. (boinc_36f37c7dd2ac0e81, slot#3)
2025-04-24 18:00:45 (4836): Removing network bandwidth throttle group from VM.
2025-04-24 18:00:45 (4836): Removing VM from VirtualBox.
18:00:51 (4836): called boinc_finish(0)

</stderr_txt>
]]>

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