Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:30:40 (3808): wrapper (7.7.26015): starting
06:30:40 (3808): wrapper: running run_atlas (--nthreads 12)
[2025-04-22 06:30:40] Arguments: --nthreads 12
[2025-04-22 06:30:40] Threads: 12
[2025-04-22 06:30:40] Checking for CVMFS
[2025-04-22 06:30:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-22 06:30:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-22 06:30:45] Running cvmfs_config stat atlas.cern.ch
[2025-04-22 06:30:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-22 06:30:47] 2.11.2.0 29457 223225 63200 145145 3 64 15596815 18432000 5860 130560 0 24449669 99.197 50724512 34116 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-22 06:30:47] CVMFS is ok
[2025-04-22 06:30:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-22 06:30:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-22 06:30:47] Further information can be found at the LHC@home message board.
[2025-04-22 06:30:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-22 06:30:47] Checking for apptainer binary...
[2025-04-22 06:30:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-22 06:30:47] Running /usr/bin/apptainer --version
[2025-04-22 06:30:49] apptainer version 1.3.2-1.el7
[2025-04-22 06:30:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-22 06:31:20] c-206-26.aglt2.org
[2025-04-22 06:31:20] apptainer works
[2025-04-22 06:31:21] Set ATHENA_PROC_NUMBER=12
[2025-04-22 06:31:21] Set ATHENA_CORE_NUMBER=12
[2025-04-22 06:31:21] Starting ATLAS job with PandaID=6611821008
[2025-04-22 06:31:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-22 06:45:09]  *** The last 200 lines of the pilot log: ***
[2025-04-22 06:45:09] 2025-04-22 10:44:48,485 | INFO     | extracted standard info from prmon json
[2025-04-22 06:45:09] 2025-04-22 10:44:48,485 | INFO     | extracted standard memory fields from prmon json
[2025-04-22 06:45:09] 2025-04-22 10:44:48,485 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-22 06:45:09] 2025-04-22 10:44:48,495 | WARNING  | wrong length of table data, x=[1745318475.0], y=[0.0] (must be same and length>=4)
[2025-04-22 06:45:09] 2025-04-22 10:44:48,495 | INFO     | ..............................
[2025-04-22 06:45:09] 2025-04-22 10:44:48,496 | INFO     | . Timing measurements:
[2025-04-22 06:45:09] 2025-04-22 10:44:48,496 | INFO     | . get job = 1 s
[2025-04-22 06:45:09] 2025-04-22 10:44:48,496 | INFO     | . initial setup = 23 s
[2025-04-22 06:45:09] 2025-04-22 10:44:48,496 | INFO     | . payload setup = 79 s
[2025-04-22 06:45:09] 2025-04-22 10:44:48,496 | INFO     | . stage-in = 2 s
[2025-04-22 06:45:09] 2025-04-22 10:44:48,496 | INFO     | . payload execution = 136 s
[2025-04-22 06:45:09] 2025-04-22 10:44:48,497 | INFO     | . stage-out = 8 s
[2025-04-22 06:45:09] 2025-04-22 10:44:48,497 | INFO     | . log creation = 2 s
[2025-04-22 06:45:09] 2025-04-22 10:44:48,497 | INFO     | ..............................
[2025-04-22 06:45:09] 2025-04-22 10:44:48,497 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-04-22 06:45:09] 2025-04-22 10:44:48,498 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/0/PanDA_Pilot-6611821008/pilotlog.txt
[2025-04-22 06:45:09] 2025-04-22 10:44:48,514 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-04-22 06:45:09] - Log from pilotlog.txt -
[2025-04-22 06:45:09] 2025-04-22 10:44:48,370 | INFO     | PID=10249 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-22 06:45:09] 2025-04-22 10:44:48,370 | INFO     | .. there are 4 such processes running
[2025-04-22 06:45:09] 2025-04-22 10:44:48,482 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-22 06:45:09] 2025-04-22 10:44:48,483 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6611821008/memory_monitor_summary.json (trf name=prmon)
[2025-04-22 06:45:09] 2025-04-22 10:44:48,485 | INFO     | extracted standard info from prmon json
[2025-04-22 06:45:09] 2025-04-22 10:44:48,485 | INFO     | extracted standard memory fields from prmon json
[2025-04-22 06:45:09] 2025-04-22 10:44:48,485 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-22 06:45:09] 2025-04-22 10:44:48,495 | WARNING  | wrong length of table data, x=[1745318475.0], y=[0.0] (must be same and length>=4)
[2025-04-22 06:45:09] 2025-04-22 10:44:48,495 | INFO     | ..............................
[2025-04-22 06:45:09] 2025-04-22 10:44:48,496 | INFO     | . Timing measurements:
[2025-04-22 06:45:09] 2025-04-22 10:44:48,496 | INFO     | . get job = 1 s
[2025-04-22 06:45:09] 2025-04-22 10:44:48,496 | INFO     | . initial setup = 23 s
[2025-04-22 06:45:09] 2025-04-22 10:44:48,496 | INFO     | . payload setup = 79 s
[2025-04-22 06:45:09] 2025-04-22 10:44:48,496 | INFO     | . stage-in = 2 s
[2025-04-22 06:45:09] 2025-04-22 10:44:48,496 | INFO     | . payload execution = 136 s
[2025-04-22 06:45:09] 2025-04-22 10:44:48,497 | INFO     | . stage-out = 8 s
[2025-04-22 06:45:09] 2025-04-22 10:44:48,497 | INFO     | . log creation = 2 s
[2025-04-22 06:45:09] 2025-04-22 10:44:48,497 | INFO     | ..............................
[2025-04-22 06:45:09] 2025-04-22 10:44:48,497 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-04-22 06:45:09] 2025-04-22 10:44:48,498 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/0/PanDA_Pilot-6611821008/pilotlog.txt
[2025-04-22 06:45:09] 2025-04-22 10:44:48,515 | WARNING  | 
[2025-04-22 06:45:09] [begin log extracts]
[2025-04-22 06:45:09] - Log from pilotlog.txt -
[2025-04-22 06:45:09] 2025-04-22 10:44:48,370 | INFO     | PID=10249 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-22 06:45:09] 2025-04-22 10:44:48,370 | INFO     | .. there are 4 such processes running
[2025-04-22 06:45:09] 2025-04-22 10:44:48,482 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-22 06:45:09] 2025-04-22 10:44:48,483 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6611821008/memory_monitor_summary.json (trf name=prmon)
[2025-04-22 06:45:09] 2025-04-22 10:44:48,485 | INFO     | extracted standard info from prmon json
[2025-04-22 06:45:09] 2025-04-22 10:44:48,485 | INFO     | extracted standard memory fields from prmon json
[2025-04-22 06:45:09] 2025-04-22 10:44:48,485 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-22 06:45:09] 2025-04-22 10:44:48,495 | WARNING  | wrong length of table data, x=[1745318475.0], y=[0.0] (must be same and length>=4)
[2025-04-22 06:45:09] 2025-04-22 10:44:48,495 | INFO     | ..............................
[2025-04-22 06:45:09] 2025-04-22 10:44:48,496 | INFO     | . Timing measurements:
[2025-04-22 06:45:09] 2025-04-22 10:44:48,496 | INFO     | . get job = 1 s
[2025-04-22 06:45:09] 2025-04-22 10:44:48,496 | INFO     | . initial setup = 23 s
[2025-04-22 06:45:09] 2025-04-22 10:44:48,496 | INFO     | . payload setup = 79 s
[2025-04-22 06:45:09] 2025-04-22 10:44:48,496 | INFO     | . stage-in = 2 s
[2025-04-22 06:45:09] 2025-04-22 10:44:48,496 | INFO     | . payload execution = 136 s
[2025-04-22 06:45:09] 2025-04-22 10:44:48,497 | INFO     | . stage-out = 8 s
[2025-04-22 06:45:09] 2025-04-22 10:44:48,497 | INFO     | . log creation = 2 s
[2025-04-22 06:45:09] 2025-04-22 10:44:48,497 | INFO     | ..............................
[2025-04-22 06:45:09] 2025-04-22 10:44:48,497 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-04-22 06:45:09] 2025-04-22 10:44:48,498 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/0/PanDA_Pilot-6611821008/pilotlog.txt
[2025-04-22 06:45:09] [end log extracts]
[2025-04-22 06:45:09] 2025-04-22 10:44:48,515 | WARNING  | pilotErrorCodes = [1305, 1187] (will report primary/first error code)
[2025-04-22 06:45:09] 2025-04-22 10:44:48,517 | WARNING  | pilotErrorDiags = ['Failed to execute payload:/bin/bash: Sim_tf.py: command not found', 'Payload metadata does not exist'] (will report primary/first error diag)
[2025-04-22 06:45:09] 2025-04-22 10:44:49,108 | INFO     | 
[2025-04-22 06:45:09] 2025-04-22 10:44:49,109 | INFO     | job summary report
[2025-04-22 06:45:09] 2025-04-22 10:44:49,109 | INFO     | --------------------------------------------------
[2025-04-22 06:45:09] 2025-04-22 10:44:49,109 | INFO     | PanDA job id: 6611821008
[2025-04-22 06:45:09] 2025-04-22 10:44:49,109 | INFO     | task id: 44178564
[2025-04-22 06:45:09] 2025-04-22 10:44:49,109 | INFO     | error 1/2: 1305: Failed to execute payload:/bin/bash: Sim_tf.py: command not found
[2025-04-22 06:45:09] 
[2025-04-22 06:45:09] 2025-04-22 10:44:49,110 | INFO     | error 2/2: 1187: Payload metadata does not exist
[2025-04-22 06:45:09] 2025-04-22 10:44:49,110 | INFO     | pilot error code: 1187
[2025-04-22 06:45:09] 2025-04-22 10:44:49,110 | INFO     | pilot error diag: metadata does not exist: /tmp/boinchome/slots/0/PanDA_Pilot-6611821008/metadata.xml
[2025-04-22 06:45:09] 2025-04-22 10:44:49,110 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-22 06:45:09] 2025-04-22 10:44:49,117 | INFO     | pilot state: failed 
[2025-04-22 06:45:09] 2025-04-22 10:44:49,117 | INFO     | transexitcode: 127
[2025-04-22 06:45:09] 2025-04-22 10:44:49,117 | INFO     | exeerrorcode: 0
[2025-04-22 06:45:09] 2025-04-22 10:44:49,117 | INFO     | exeerrordiag: 
[2025-04-22 06:45:09] 2025-04-22 10:44:49,117 | INFO     | exitcode: 0
[2025-04-22 06:45:09] 2025-04-22 10:44:49,117 | INFO     | exitmsg: 
[2025-04-22 06:45:09] 2025-04-22 10:44:49,118 | INFO     | cpuconsumptiontime: 12 s
[2025-04-22 06:45:09] 2025-04-22 10:44:49,118 | INFO     | nevents: 0
[2025-04-22 06:45:09] 2025-04-22 10:44:49,118 | INFO     | neventsw: 0
[2025-04-22 06:45:09] 2025-04-22 10:44:49,118 | INFO     | pid: 18262
[2025-04-22 06:45:09] 2025-04-22 10:44:49,118 | INFO     | pgrp: 18262
[2025-04-22 06:45:09] 2025-04-22 10:44:49,118 | INFO     | corecount: 12
[2025-04-22 06:45:09] 2025-04-22 10:44:49,119 | INFO     | event service: False
[2025-04-22 06:45:09] 2025-04-22 10:44:49,119 | INFO     | sizes: {0: 2425977, 3: 2426578, 4: 2426662, 7: 2426718, 9: 2426917, 23: 2426917, 36: 2427073, 49: 2427101, 62: 2427129, 74: 2427157, 85: 2427391, 88: 2427699, 221:
[2025-04-22 06:45:09] 2025-04-22 10:44:49,119 | INFO     | --------------------------------------------------
[2025-04-22 06:45:09] 2025-04-22 10:44:49,119 | INFO     | 
[2025-04-22 06:45:09] 2025-04-22 10:44:49,119 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-22 06:45:09] 2025-04-22 10:44:49,239 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-22 06:45:09] 2025-04-22 10:44:49,239 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-22 06:45:09] 2025-04-22 10:44:49,239 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-22 06:45:09] 2025-04-22 10:44:49,240 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-22 06:45:09] 2025-04-22 10:44:49,240 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-22 06:45:09] 2025-04-22 10:44:49,240 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-22 06:45:09] 2025-04-22 10:44:49,240 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-22 06:45:09] 2025-04-22 10:44:49,240 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-22 06:45:09] 2025-04-22 10:44:49,270 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-22 06:45:09] 2025-04-22 10:44:49,270 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-22 06:45:09] 2025-04-22 10:44:49,270 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-22 06:45:09] 2025-04-22 10:44:49,270 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-22 06:45:09] 2025-04-22 10:44:49,288 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-22 06:45:09] 2025-04-22 10:44:49,288 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-22 06:45:09] 2025-04-22 10:44:49,288 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-22 06:45:09] 2025-04-22 10:44:49,288 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-22 06:45:09] 2025-04-22 10:44:49,288 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-22 06:45:09] 2025-04-22 10:44:49,289 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-22 06:45:09] 2025-04-22 10:44:49,289 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-22 06:45:09] 2025-04-22 10:44:49,289 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-22 06:45:09] 2025-04-22 10:44:49,289 | INFO     | job 6611821008 has completed (purged errors)
[2025-04-22 06:45:09] 2025-04-22 10:44:49,326 | INFO     | overall cleanup function is called
[2025-04-22 06:45:09] 2025-04-22 10:44:50,331 | INFO     | --- collectZombieJob: --- 10, [18262]
[2025-04-22 06:45:09] 2025-04-22 10:44:50,332 | INFO     | zombie collector waiting for pid 18262
[2025-04-22 06:45:09] 2025-04-22 10:44:50,332 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-22 06:45:09] 2025-04-22 10:44:50,332 | INFO     | collected zombie processes
[2025-04-22 06:45:09] 2025-04-22 10:44:50,332 | INFO     | will attempt to kill all subprocesses of pid=18262
[2025-04-22 06:45:09] 2025-04-22 10:44:50,617 | INFO     | process IDs to be killed: [18262] (in reverse order)
[2025-04-22 06:45:09] 2025-04-22 10:44:50,683 | WARNING  | found no corresponding commands to process id(s)
[2025-04-22 06:45:09] 2025-04-22 10:44:50,684 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-22 06:45:09] 2025-04-22 10:44:50,689 | INFO     | did not find any defunct processes belonging to 18262
[2025-04-22 06:45:09] 2025-04-22 10:44:50,695 | INFO     | did not find any defunct processes belonging to 18262
[2025-04-22 06:45:09] 2025-04-22 10:44:50,695 | INFO     | ready for new job
[2025-04-22 06:45:09] 2025-04-22 10:44:50,696 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-22 06:45:09] 2025-04-22 10:44:50,698 | INFO     | **************************************
[2025-04-22 06:45:09] 2025-04-22 10:44:50,698 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-22 06:45:09] 2025-04-22 10:44:50,698 | INFO     | **************************************
[2025-04-22 06:45:09] 2025-04-22 10:44:50,698 | INFO     | 
[2025-04-22 06:45:09] 2025-04-22 10:44:50,700 | INFO     | architecture information:
[2025-04-22 06:45:09] 2025-04-22 10:44:50,700 | INFO     | executing command: cat /etc/os-release
[2025-04-22 06:45:09] 2025-04-22 10:44:50,724 | INFO     | cat /etc/os-release:
[2025-04-22 06:45:09] NAME="CentOS Linux"
[2025-04-22 06:45:09] VERSION="7 (Core)"
[2025-04-22 06:45:09] ID="centos"
[2025-04-22 06:45:09] ID_LIKE="rhel fedora"
[2025-04-22 06:45:09] VERSION_ID="7"
[2025-04-22 06:45:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-22 06:45:09] ANSI_COLOR="0;31"
[2025-04-22 06:45:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-22 06:45:09] HOME_URL="https://www.centos.org/"
[2025-04-22 06:45:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-22 06:45:09] 
[2025-04-22 06:45:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-22 06:45:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-22 06:45:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-22 06:45:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-22 06:45:09] 
[2025-04-22 06:45:09] 2025-04-22 10:44:50,725 | INFO     | **************************************
[2025-04-22 06:45:09] 2025-04-22 10:44:51,229 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-22 06:45:09] 2025-04-22 10:44:51,598 | INFO     | sufficient remaining disk space (29197598720 B)
[2025-04-22 06:45:09] 2025-04-22 10:44:51,622 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-22 06:45:09] 2025-04-22 10:44:51,622 | INFO     | current server update state: UPDATING_FINAL
[2025-04-22 06:45:09] 2025-04-22 10:44:51,622 | INFO     | update_server=False
[2025-04-22 06:45:09] 2025-04-22 10:44:51,622 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-22 06:45:09] 2025-04-22 10:44:52,028 | INFO     | all data control threads have been joined
[2025-04-22 06:45:09] 2025-04-22 10:44:52,335 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-22 06:45:09] 2025-04-22 10:44:52,336 | INFO     | aborting loop
[2025-04-22 06:45:09] 2025-04-22 10:44:52,368 | INFO     | all job control threads have been joined
[2025-04-22 06:45:09] 2025-04-22 10:44:52,422 | INFO     | found 0 job(s) in 20 queues
[2025-04-22 06:45:09] 2025-04-22 10:44:52,422 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-22 06:45:09] 2025-04-22 10:44:52,422 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-22 06:45:09] 2025-04-22 10:44:52,629 | INFO     | [job] retrieve thread has finished
[2025-04-22 06:45:09] 2025-04-22 10:44:52,722 | INFO     | [job] validate thread has finished
[2025-04-22 06:45:09] 2025-04-22 10:44:52,766 | INFO     | [payload] failed_post thread has finished
[2025-04-22 06:45:09] 2025-04-22 10:44:52,819 | INFO     | all payload control threads have been joined
[2025-04-22 06:45:09] 2025-04-22 10:44:52,906 | INFO     | [payload] validate_post thread has finished
[2025-04-22 06:45:09] 2025-04-22 10:44:53,008 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-22 06:45:09] 2025-04-22 10:44:53,032 | INFO     | [job] create_data_payload thread has finished
[2025-04-22 06:45:09] 2025-04-22 10:44:53,036 | INFO     | [data] control thread has finished
[2025-04-22 06:45:09] 2025-04-22 10:44:53,046 | INFO     | [payload] validate_pre thread has finished
[2025-04-22 06:45:09] 2025-04-22 10:44:53,187 | INFO     | [data] copytool_in thread has finished
[2025-04-22 06:45:09] 2025-04-22 10:44:53,342 | INFO     | [job] job monitor thread has finished
[2025-04-22 06:45:09] 2025-04-22 10:44:53,375 | INFO     | [job] control thread has finished
[2025-04-22 06:45:09] 2025-04-22 10:44:53,421 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-22 06:45:09] 2025-04-22 10:44:53,711 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-22 06:45:09] 2025-04-22 10:44:53,826 | INFO     | [payload] control thread has finished
[2025-04-22 06:45:09] 2025-04-22 10:44:54,105 | INFO     | [payload] execute_payloads thread has finished
[2025-04-22 06:45:09] 2025-04-22 10:44:54,132 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-22 06:45:09] 2025-04-22 10:44:54,717 | INFO     | [job] queue monitor thread has finished
[2025-04-22 06:45:09] 2025-04-22 10:44:55,015 | INFO     | [data] copytool_out thread has finished
[2025-04-22 06:45:09] 2025-04-22 10:44:57,431 | INFO     | [data] queue_monitor thread has finished
[2025-04-22 06:45:09] 2025-04-22 10:44:59,312 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140021619984192)>', '<ExcThread(monitor, started 140020950226688)>']
[2025-04-22 06:45:09] 2025-04-22 10:44:59,467 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-22 06:45:09] 2025-04-22 10:44:59,468 | INFO     | [monitor] control thread has ended
[2025-04-22 06:45:09] 2025-04-22 10:45:04,336 | INFO     | all workflow threads have been joined
[2025-04-22 06:45:09] 2025-04-22 10:45:04,337 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-22 06:45:09] 2025-04-22 10:45:04,337 | INFO     | traces error code: 0
[2025-04-22 06:45:09] 2025-04-22 10:45:04,337 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-22 06:45:09] 2025-04-22 10:45:05,321 [wrapper] ==== pilot stdout END ====
[2025-04-22 06:45:09] 2025-04-22 10:45:05,399 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-22 06:45:09] 2025-04-22 10:45:05,471 [wrapper] pilotpid: 10249
[2025-04-22 06:45:09] 2025-04-22 10:45:05,525 [wrapper] Pilot exit status: 0
[2025-04-22 06:45:09] 2025-04-22 10:45:05,835 [wrapper] pandaids: 6611821008
[2025-04-22 06:45:09] 2025-04-22 10:45:06,307 [wrapper] cleanup supervisor_pilot 10299 10250
[2025-04-22 06:45:09] 2025-04-22 10:45:06,361 [wrapper] Test setup, not cleaning
[2025-04-22 06:45:09] 2025-04-22 10:45:06,393 [wrapper] apfmon messages muted
[2025-04-22 06:45:09] 2025-04-22 10:45:06,396 [wrapper] ==== wrapper stdout END ====
[2025-04-22 06:45:09] 2025-04-22 10:45:06,399 [wrapper] ==== wrapper stderr END ====
[2025-04-22 06:45:09]  *** Error codes and diagnostics ***
[2025-04-22 06:45:09]     "exeErrorCode": 0,
[2025-04-22 06:45:09]     "exeErrorDiag": "",
[2025-04-22 06:45:09]     "pilotErrorCode": 1305,
[2025-04-22 06:45:09]     "pilotErrorDiag": "Failed to execute payload:/bin/bash: Sim_tf.py: command not found",
[2025-04-22 06:45:09]  *** Listing of results directory ***
[2025-04-22 06:45:09] total 319392
[2025-04-22 06:45:09] -rw-r--r-- 1 boincer umatlas    495897 Apr 22 06:21 pilot3.tar.gz
[2025-04-22 06:45:09] -rw-r--r-- 1 boincer umatlas      5111 Apr 22 06:23 queuedata.json
[2025-04-22 06:45:09] -rwx------ 1 boincer umatlas     37140 Apr 22 06:23 runpilot2-wrapper.sh
[2025-04-22 06:45:09] -rw-r--r-- 1 boincer umatlas       100 Apr 22 06:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-22 06:45:09] -rwxr-xr-x 1 boincer umatlas      7986 Apr 22 06:30 run_atlas
[2025-04-22 06:45:09] -rw-r--r-- 1 boincer umatlas       105 Apr 22 06:30 job.xml
[2025-04-22 06:45:09] -rw-r--r-- 2 boincer umatlas 322989827 Apr 22 06:30 EVNT.44178562._000001.pool.root.1
[2025-04-22 06:45:09] -rw-r--r-- 2 boincer umatlas     17569 Apr 22 06:30 start_atlas.sh
[2025-04-22 06:45:09] drwxrwx--x 2 boincer umatlas      4096 Apr 22 06:30 shared
[2025-04-22 06:45:09] -rw-r--r-- 2 boincer umatlas    508884 Apr 22 06:30 input.tar.gz
[2025-04-22 06:45:09] -rw-r--r-- 1 boincer umatlas         0 Apr 22 06:30 boinc_lockfile
[2025-04-22 06:45:09] -rw-r--r-- 1 boincer umatlas      2582 Apr 22 06:31 pandaJob.out
[2025-04-22 06:45:09] -rw------- 1 boincer umatlas       424 Apr 22 06:31 setup.sh.local
[2025-04-22 06:45:09] -rw------- 1 boincer umatlas    995376 Apr 22 06:34 agis_schedconf.cvmfs.json
[2025-04-22 06:45:09] -rw------- 1 boincer umatlas   1618536 Apr 22 06:34 agis_ddmendpoints.agis.ALL.json
[2025-04-22 06:45:09] drwx------ 4 boincer umatlas      4096 Apr 22 06:34 pilot3
[2025-04-22 06:45:09] -rw-r--r-- 1 boincer umatlas      5862 Apr 22 06:38 init_data.xml
[2025-04-22 06:45:09] -rw------- 1 boincer umatlas       917 Apr 22 06:41 memory_monitor_summary.json
[2025-04-22 06:45:09] -rw------- 1 boincer umatlas      9366 Apr 22 06:41 log.44178564._000100.job.log.tgz.1
[2025-04-22 06:45:09] -rw------- 1 boincer umatlas        95 Apr 22 06:44 pilot_heartbeat.json
[2025-04-22 06:45:09] -rw------- 1 boincer umatlas      2555 Apr 22 06:44 heartbeat.json
[2025-04-22 06:45:09] -rw------- 1 boincer umatlas      4353 Apr 22 06:45 pilotlog.txt
[2025-04-22 06:45:09] -rw------- 1 boincer umatlas     94792 Apr 22 06:45 log.44178564._000100.job.log.1
[2025-04-22 06:45:09] -rw-r--r-- 1 boincer umatlas        23 Apr 22 06:45 wrapper_checkpoint.txt
[2025-04-22 06:45:09] -rw-r--r-- 1 boincer umatlas      8192 Apr 22 06:45 boinc_mmap_file
[2025-04-22 06:45:09] -rw-r--r-- 1 boincer umatlas       524 Apr 22 06:45 boinc_task_state.xml
[2025-04-22 06:45:09] -rw------- 1 boincer umatlas       188 Apr 22 06:45 output.list
[2025-04-22 06:45:09] -rw-r--r-- 1 boincer umatlas       620 Apr 22 06:45 runtime_log
[2025-04-22 06:45:09] -rw------- 1 boincer umatlas    122880 Apr 22 06:45 result.tar.gz
[2025-04-22 06:45:09] -rw-r--r-- 1 boincer umatlas     10862 Apr 22 06:45 runtime_log.err
[2025-04-22 06:45:09] -rw------- 1 boincer umatlas       642 Apr 22 06:45 J1HMDmQyPR7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmcP8KDmYViNem.diag
[2025-04-22 06:45:09] -rw-r--r-- 1 boincer umatlas     21536 Apr 22 06:45 stderr.txt
[2025-04-22 06:45:09] No HITS result produced
[2025-04-22 06:45:09]  *** Contents of shared directory: ***
[2025-04-22 06:45:09] total 316060
[2025-04-22 06:45:09] -rw-r--r-- 2 boincer umatlas 322989827 Apr 22 06:30 ATLAS.root_0
[2025-04-22 06:45:09] -rw-r--r-- 2 boincer umatlas     17569 Apr 22 06:30 start_atlas.sh
[2025-04-22 06:45:09] -rw-r--r-- 2 boincer umatlas    508884 Apr 22 06:30 input.tar.gz
[2025-04-22 06:45:09] -rw------- 1 boincer umatlas    122880 Apr 22 06:45 result.tar.gz
06:45:10 (3808): run_atlas exited; CPU time 41.836923
06:45:10 (3808): called boinc_finish(0)

</stderr_txt>
]]>

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