Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-22 07:32:05 (1648): Detected: vboxwrapper 26206
2025-04-22 07:32:05 (1648): Detected: BOINC client v7.16.11
2025-04-22 07:32:06 (1648): Detected: VirtualBox VboxManage Interface (Version: 6.1.12)
2025-04-22 07:32:06 (1648): Successfully copied 'init_data.xml' to the shared directory.
2025-04-22 07:32:07 (1648): Create VM. (boinc_36e0de14d116bd84, slot#4)
2025-04-22 07:32:07 (1648): Setting Memory Size for VM. (4300MB)
2025-04-22 07:32:07 (1648): Setting CPU Count for VM. (3)
2025-04-22 07:32:08 (1648): Setting Chipset Options for VM.
2025-04-22 07:32:08 (1648): Setting Graphics Controller Options for VM.
2025-04-22 07:32:08 (1648): Setting Boot Options for VM.
2025-04-22 07:32:08 (1648): Setting Network Configuration for NAT.
2025-04-22 07:32:09 (1648): Enabling VM Network Access.
2025-04-22 07:32:09 (1648): Disabling USB Support for VM.
2025-04-22 07:32:09 (1648): Disabling COM Port Support for VM.
2025-04-22 07:32:10 (1648): Disabling LPT Port Support for VM.
2025-04-22 07:32:10 (1648): Disabling Audio Support for VM.
2025-04-22 07:32:10 (1648): Disabling Clipboard Support for VM.
2025-04-22 07:32:10 (1648): Disabling Drag and Drop Support for VM.
2025-04-22 07:32:11 (1648): Adding storage controller(s) to VM.
2025-04-22 07:32:11 (1648): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-22 07:32:12 (1648): Adding VirtualBox Guest Additions to VM.
2025-04-22 07:32:12 (1648): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-22 07:32:13 (1648): forwarding host port 64489 to guest port 80
2025-04-22 07:32:13 (1648): Enabling remote desktop for VM.
2025-04-22 07:32:13 (1648): Required extension pack not installed, remote desktop not enabled.
2025-04-22 07:32:13 (1648): Enabling shared directory for VM.
2025-04-22 07:32:14 (1648): Starting VM using VBoxManage interface. (boinc_36e0de14d116bd84, slot#4)
2025-04-22 07:32:17 (1648): Successfully started VM. (PID = '7184')
2025-04-22 07:32:17 (1648): Reporting VM Process ID to BOINC.
2025-04-22 07:32:17 (1648): Guest Log: BIOS: VirtualBox 6.1.12
2025-04-22 07:32:17 (1648): Guest Log: CPUID EDX: 0x178bfbff
2025-04-22 07:32:17 (1648): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-22 07:32:17 (1648): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-22 07:32:17 (1648): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-22 07:32:17 (1648): Detected: Web Application Enabled (http://localhost:64489)
2025-04-22 07:32:17 (1648): Preference change detected
2025-04-22 07:32:17 (1648): Setting CPU throttle for VM. (100%)
2025-04-22 07:32:17 (1648): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-22 07:32:19 (1648): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-22 07:32:19 (1648): Guest Log: BIOS: Booting from Hard Disk...
2025-04-22 07:32:21 (1648): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-22 07:32:21 (1648): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-22 07:32:21 (1648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-22 07:32:21 (1648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-22 07:32:21 (1648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-22 07:32:21 (1648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-22 07:32:21 (1648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-22 07:32:21 (1648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-22 07:32:21 (1648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-22 07:32:21 (1648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-22 07:32:21 (1648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-22 07:32:21 (1648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-22 07:32:21 (1648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-22 07:32:21 (1648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-22 07:32:21 (1648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-22 07:32:21 (1648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-22 07:32:21 (1648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-22 07:32:21 (1648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-22 07:32:21 (1648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-22 07:32:21 (1648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-22 07:32:21 (1648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-22 07:32:21 (1648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-22 07:32:21 (1648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-22 07:32:21 (1648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-22 07:32:21 (1648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-22 07:32:21 (1648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-22 07:32:21 (1648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-22 07:32:21 (1648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-22 07:32:21 (1648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-22 07:32:21 (1648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-22 07:32:21 (1648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-22 07:32:21 (1648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-22 07:32:27 (1648): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-22 07:32:27 (1648): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-22 07:32:32 (1648): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-22 07:32:32 (1648): Guest Log: 00:00:00.000133 main     Log opened 2025-04-22T07:32:30.792337000Z
2025-04-22 07:32:32 (1648): Guest Log: 00:00:00.000221 main     OS Product: Linux
2025-04-22 07:32:32 (1648): Guest Log: 00:00:00.000242 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-22 07:32:32 (1648): Guest Log: 00:00:00.000258 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-22 07:32:32 (1648): Guest Log: 00:00:00.000275 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-22 07:32:32 (1648): Guest Log: 00:00:00.000275 main     Process ID: 1280
2025-04-22 07:32:32 (1648): Guest Log: 00:00:00.000276 main     Package type: LINUX_64BITS_GENERIC
2025-04-22 07:32:32 (1648): Guest Log: 00:00:00.000811 main     5.2.32 r132073 started. Verbose level = 0
2025-04-22 07:32:32 (1648): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-22 07:32:32 (1648): Guest Log: [INFO] Mounting shared directory
2025-04-22 07:32:32 (1648): Guest Log: [INFO] Checking for init_data.xml
2025-04-22 07:32:40 (1648): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-22 07:32:40 (1648): Guest Log: [INFO] Detected branch: prod
2025-04-22 07:32:41 (1648): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-22 07:32:41 (1648): Guest Log: Copying input files
2025-04-22 07:32:42 (1648): Guest Log: 00:00:10.002344 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 992 589 000ns (GuestNow=1 745 299 961 801 445 000 ns GuestLast=1 745 307 150 794 034 000 ns fSetTimeLastLoop=true )
2025-04-22 07:32:43 (1648): Guest Log: Copied input files into RunAtlas.
2025-04-22 07:32:43 (1648): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-22 07:32:43 (1648): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-22 07:32:43 (1648): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-22 07:32:43 (1648): Guest Log: Further information can be found at the LHC@home message board.
2025-04-22 07:32:51 (1648): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-22 07:32:53 (1648): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-22 07:32:53 (1648): Guest Log: 2.6.3.0 1557 0 32192 145137 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-22 07:32:54 (1648): Guest Log: copied the webapp to /var/www
2025-04-22 07:32:54 (1648): Guest Log: ATHENA_PROC_NUMBER=3
2025-04-22 07:32:54 (1648): Guest Log: ATHENA_CORE_NUMBER=3
2025-04-22 07:32:55 (1648): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-22 07:32:55 (1648): Guest Log:  *** Starting ATLAS job. (PandaID=6611658702 taskID=44178881) ***
2025-04-22 07:49:05 (1648): Guest Log:  *** Job finished ***
2025-04-22 07:49:05 (1648): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-22 07:49:05 (1648): Guest Log: 2025-04-22 05:48:53,823 | INFO     | [job] validate thread has finished
2025-04-22 07:49:05 (1648): Guest Log: 2025-04-22 05:48:54,852 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-04-22 07:49:05 (1648): Guest Log: 2025-04-22 05:48:58,895 | INFO     | [data] queue_monitor thread has finished
2025-04-22 07:49:05 (1648): Guest Log: 2025-04-22 05:48:59,144 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139865117116224)>', '<ExcThread(monitor, started 139864435570432)>']
2025-04-22 07:49:05 (1648): Guest Log: 2025-04-22 05:48:59,243 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-22 07:49:05 (1648): Guest Log: 2025-04-22 05:48:59,243 | INFO     | [monitor] control thread has ended
2025-04-22 07:49:05 (1648): Guest Log: 2025-04-22 05:49:04,217 | INFO     | all workflow threads have been joined
2025-04-22 07:49:05 (1648): Guest Log: 2025-04-22 05:49:04,217 | INFO     | end of generic workflow (traces error code: 0)
2025-04-22 07:49:05 (1648): Guest Log: 2025-04-22 05:49:04,217 | INFO     | traces error code: 0
2025-04-22 07:49:05 (1648): Guest Log: 2025-04-22 05:49:04,217 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-22 07:49:05 (1648): Guest Log: 2025-04-22 05:49:04,319 [wrapper] ==== pilot stdout END ====
2025-04-22 07:49:05 (1648): Guest Log: 2025-04-22 05:49:04,323 [wrapper] ==== wrapper stdout RESUME ====
2025-04-22 07:49:05 (1648): Guest Log: 2025-04-22 05:49:04,327 [wrapper] pilotpid: 5925
2025-04-22 07:49:05 (1648): Guest Log: 2025-04-22 05:49:04,331 [wrapper] Pilot exit status: 0
2025-04-22 07:49:05 (1648): Guest Log: 2025-04-22 05:49:04,922 [wrapper] pandaids: 6611658702
2025-04-22 07:49:05 (1648): Guest Log: 2025-04-22 05:49:04,952 [wrapper] cleanup supervisor_pilot  5931 5926
2025-04-22 07:49:05 (1648): Guest Log: 2025-04-22 05:49:04,957 [wrapper] Test setup, not cleaning
2025-04-22 07:49:05 (1648): Guest Log: 2025-04-22 05:49:04,961 [wrapper] apfmon messages muted
2025-04-22 07:49:05 (1648): Guest Log: 2025-04-22 05:49:04,966 [wrapper] ==== wrapper stdout END ====
2025-04-22 07:49:05 (1648): Guest Log: 2025-04-22 05:49:04,970 [wrapper] ==== wrapper stderr END ====
2025-04-22 07:49:05 (1648): Guest Log:  *** Error codes and diagnostics ***
2025-04-22 07:49:05 (1648): Guest Log:     "exeErrorCode": 0,
2025-04-22 07:49:05 (1648): Guest Log:     "exeErrorDiag": "",
2025-04-22 07:49:05 (1648): Guest Log:     "pilotErrorCode": 1305,
2025-04-22 07:49:05 (1648): Guest Log:     "pilotErrorDiag": "Failed to execute payload:/bin/bash: Sim_tf.py: command not found",
2025-04-22 07:49:05 (1648): Guest Log:  *** Listing of results directory ***
2025-04-22 07:49:05 (1648): Guest Log: total 3892
2025-04-22 07:49:05 (1648): Guest Log: -rw-r--r--. 1 atlas atlas  495897 Apr 22 05:02 pilot3.tar.gz
2025-04-22 07:49:05 (1648): Guest Log: -rw-r--r--. 1 atlas atlas    5111 Apr 22 05:05 queuedata.json
2025-04-22 07:49:05 (1648): Guest Log: -rwx------. 1 atlas atlas   37140 Apr 22 05:07 runpilot2-wrapper.sh
2025-04-22 07:49:05 (1648): Guest Log: -rwxr-xr-x. 1 atlas atlas    8840 Apr 22 05:32 init_data.xml
2025-04-22 07:49:05 (1648): Guest Log: -rwxr-xr-x. 1 atlas atlas  508868 Apr 22 05:32 input.tar.gz
2025-04-22 07:49:05 (1648): Guest Log: -rwxr-xr-x. 1 atlas atlas   17569 Apr 22 05:32 start_atlas.sh
2025-04-22 07:49:05 (1648): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Apr 22 05:32 EVNT.44178879._000001.pool.root.1 -> /data/./ATLAS.root_0
2025-04-22 07:49:05 (1648): Guest Log: -rw-r--r--. 1 atlas atlas    2525 Apr 22 05:32 pandaJob.out
2025-04-22 07:49:05 (1648): Guest Log: -rw-------. 1 atlas atlas     424 Apr 22 05:33 setup.sh.local
2025-04-22 07:49:05 (1648): Guest Log: -rw-------. 1 atlas atlas  991276 Apr 22 05:39 agis_schedconf.cvmfs.json
2025-04-22 07:49:05 (1648): Guest Log: -rw-------. 1 atlas atlas 1618536 Apr 22 05:39 agis_ddmendpoints.agis.ALL.json
2025-04-22 07:49:05 (1648): Guest Log: drwx------. 4 atlas atlas    4096 Apr 22 05:40 pilot3
2025-04-22 07:49:05 (1648): Guest Log: -rw-------. 1 atlas atlas     275 Apr 22 05:46 memory_monitor_summary.json
2025-04-22 07:49:05 (1648): Guest Log: -rw-------. 1 atlas atlas    8953 Apr 22 05:46 log.44178881._000093.job.log.tgz.1
2025-04-22 07:49:05 (1648): Guest Log: -rw-------. 1 atlas atlas      95 Apr 22 05:47 pilot_heartbeat.json
2025-04-22 07:49:05 (1648): Guest Log: -rw-------. 1 atlas atlas    2218 Apr 22 05:48 heartbeat.json
2025-04-22 07:49:05 (1648): Guest Log: -rw-------. 1 atlas atlas    4413 Apr 22 05:49 pilotlog.txt
2025-04-22 07:49:05 (1648): Guest Log: -rw-------. 1 atlas atlas   88290 Apr 22 05:49 log.44178881._000093.job.log.1
2025-04-22 07:49:05 (1648): Guest Log: -rw-------. 1 atlas atlas     188 Apr 22 05:49 output.list
2025-04-22 07:49:05 (1648): Guest Log: -rw-r--r--. 1 atlas atlas     620 Apr 22 05:49 runtime_log
2025-04-22 07:49:05 (1648): Guest Log: -rw-------. 1 atlas atlas  112640 Apr 22 05:49 result.tar.gz
2025-04-22 07:49:05 (1648): Guest Log: -rw-r--r--. 1 atlas atlas   10785 Apr 22 05:49 runtime_log.err
2025-04-22 07:49:05 (1648): Guest Log: -rw-------. 1 atlas atlas     639 Apr 22 05:49 J1wKDmM2KR7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmLN8KDmFbvz4m.diag
2025-04-22 07:49:05 (1648): Guest Log: Looking for outputfile HITS.44178881._000093.pool.root.1
2025-04-22 07:49:05 (1648): Guest Log: No HITS file was produced
2025-04-22 07:49:05 (1648): Guest Log: Successfully finished the ATLAS job!
2025-04-22 07:49:05 (1648): Guest Log: Copying the results back to the shared directory!
2025-04-22 07:49:06 (1648): Guest Log:  *** Contents of shared directory: ***
2025-04-22 07:49:06 (1648): Guest Log: total 222056
2025-04-22 07:49:06 (1648): Guest Log: -rwxrwxrwx. 1 root root 226725097 Apr 22 05:32 ATLAS.root_0
2025-04-22 07:49:06 (1648): Guest Log: -rwxrwxrwx. 1 root root      8840 Apr 22 05:32 init_data.xml
2025-04-22 07:49:06 (1648): Guest Log: -rwxrwxrwx. 1 root root    508868 Apr 22 05:21 input.tar.gz
2025-04-22 07:49:06 (1648): Guest Log: -rwxrwxrwx. 1 root root    112640 Apr 22 05:49 result.tar.gz
2025-04-22 07:49:06 (1648): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 22 05:21 start_atlas.sh
2025-04-22 07:49:06 (1648): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-22 07:49:06 (1648): VM Completion File Detected.
2025-04-22 07:49:06 (1648): Powering off VM.
2025-04-22 07:49:06 (1648): Successfully stopped VM.
2025-04-22 07:49:06 (1648): Deregistering VM. (boinc_36e0de14d116bd84, slot#4)
2025-04-22 07:49:06 (1648): Removing network bandwidth throttle group from VM.
2025-04-22 07:49:06 (1648): Removing VM from VirtualBox.
07:49:12 (1648): called boinc_finish(0)

</stderr_txt>
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