Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-21 18:45:53 (30125): Detected: vboxwrapper 26206
2025-04-21 18:45:53 (30125): Detected: BOINC client v8.0.4
2025-04-21 18:45:53 (30125): Detected: VirtualBox VboxManage Interface (Version: 6.1.44)
2025-04-21 18:45:53 (30125): Detected: Sandbox Configuration Enabled
2025-04-21 18:45:53 (30125): Successfully copied 'init_data.xml' to the shared directory.
2025-04-21 18:45:54 (30125): Create VM. (boinc_56a5eb512d1d99ed, slot#3)
2025-04-21 18:45:54 (30125): Setting Memory Size for VM. (4200MB)
2025-04-21 18:45:54 (30125): Setting CPU Count for VM. (2)
2025-04-21 18:45:54 (30125): Setting Chipset Options for VM.
2025-04-21 18:45:54 (30125): Setting Graphics Controller Options for VM.
2025-04-21 18:45:54 (30125): Setting Boot Options for VM.
2025-04-21 18:45:54 (30125): Setting Network Configuration for NAT.
2025-04-21 18:45:54 (30125): Enabling VM Network Access.
2025-04-21 18:45:55 (30125): Disabling USB Support for VM.
2025-04-21 18:45:55 (30125): Disabling COM Port Support for VM.
2025-04-21 18:45:55 (30125): Disabling Audio Support for VM.
2025-04-21 18:45:55 (30125): Disabling Clipboard Support for VM.
2025-04-21 18:45:55 (30125): Disabling Drag and Drop Support for VM.
2025-04-21 18:45:55 (30125): Adding storage controller(s) to VM.
2025-04-21 18:45:55 (30125): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-21 18:45:56 (30125): Adding VirtualBox Guest Additions to VM.
2025-04-21 18:45:56 (30125): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-21 18:45:56 (30125): forwarding host port 49237 to guest port 80
2025-04-21 18:45:56 (30125): Enabling remote desktop for VM.
2025-04-21 18:45:56 (30125): Required extension pack not installed, remote desktop not enabled.
2025-04-21 18:45:56 (30125): Enabling shared directory for VM.
2025-04-21 18:45:56 (30125): Starting VM using VBoxManage interface. (boinc_56a5eb512d1d99ed, slot#3)
2025-04-21 18:45:57 (30125): Successfully started VM. (PID = '30188')
2025-04-21 18:45:57 (30125): Reporting VM Process ID to BOINC.
2025-04-21 18:45:57 (30125): Guest Log: BIOS: VirtualBox 6.1.44
2025-04-21 18:45:57 (30125): Guest Log: CPUID EDX: 0x178bfbff
2025-04-21 18:45:57 (30125): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-21 18:45:57 (30125): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-21 18:45:57 (30125): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-21 18:45:57 (30125): Detected: Web Application Enabled (http://localhost:49237)
2025-04-21 18:45:57 (30125): Preference change detected
2025-04-21 18:45:57 (30125): Setting CPU throttle for VM. (100%)
2025-04-21 18:45:57 (30125): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-21 18:45:59 (30125): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-21 18:45:59 (30125): Guest Log: BIOS: Booting from Hard Disk...
2025-04-21 18:46:01 (30125): VM state change detected. (old = 'running', new = 'paused')
2025-04-21 18:46:21 (30125): VM state change detected. (old = 'paused', new = 'running')
2025-04-21 18:46:41 (30125): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-21 18:46:41 (30125): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-21 18:46:41 (30125): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-21 18:46:41 (30125): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-21 18:46:41 (30125): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-21 18:46:41 (30125): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-21 18:46:41 (30125): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-21 18:46:41 (30125): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-21 18:46:41 (30125): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-21 18:46:41 (30125): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-21 18:46:41 (30125): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-21 18:46:41 (30125): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-21 18:46:41 (30125): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-21 18:46:41 (30125): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-21 18:46:41 (30125): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-21 18:46:41 (30125): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-21 18:46:41 (30125): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-21 18:46:41 (30125): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-21 18:46:41 (30125): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-21 18:46:41 (30125): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-21 18:46:41 (30125): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-21 18:46:41 (30125): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-21 18:46:41 (30125): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-21 18:46:41 (30125): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-21 18:46:41 (30125): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-21 18:46:41 (30125): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-21 18:46:41 (30125): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-21 18:46:41 (30125): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-21 18:46:41 (30125): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-21 18:46:41 (30125): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-21 18:46:41 (30125): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-21 18:46:41 (30125): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-21 18:46:50 (30125): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-21 18:46:50 (30125): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-21 18:47:05 (30125): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-21 18:47:05 (30125): Guest Log: 00:00:00.000218 main     Log opened 2025-04-21T16:46:43.383708000Z
2025-04-21 18:47:05 (30125): Guest Log: 00:00:00.000360 main     OS Product: Linux
2025-04-21 18:47:05 (30125): Guest Log: 00:00:00.000426 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-21 18:47:05 (30125): Guest Log: 00:00:00.000485 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-21 18:47:05 (30125): Guest Log: 00:00:00.000545 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-21 18:47:05 (30125): Guest Log: 00:00:00.000546 main     Process ID: 1231
2025-04-21 18:47:05 (30125): Guest Log: 00:00:00.000547 main     Package type: LINUX_64BITS_GENERIC
2025-04-21 18:47:05 (30125): Guest Log: 00:00:00.002382 main     5.2.32 r132073 started. Verbose level = 0
2025-04-21 18:47:06 (30125): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-21 18:47:06 (30125): Guest Log: [INFO] Mounting shared directory
2025-04-21 18:47:06 (30125): Guest Log: [INFO] Checking for init_data.xml
2025-04-21 18:47:10 (30125): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-21 18:47:10 (30125): Guest Log: [INFO] Detected branch: prod
2025-04-21 18:47:10 (30125): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-21 18:47:10 (30125): Guest Log: Copying input files
2025-04-21 18:47:11 (30125): Guest Log: Copied input files into RunAtlas.
2025-04-21 18:47:11 (30125): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-21 18:47:11 (30125): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-21 18:47:11 (30125): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-21 18:47:11 (30125): Guest Log: Further information can be found at the LHC@home message board.
2025-04-21 18:47:22 (30125): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-21 18:47:22 (30125): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-21 18:47:22 (30125): Guest Log: 2.6.3.0 1506 0 30068 145117 3 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-21 18:47:26 (30125): Guest Log: copied the webapp to /var/www
2025-04-21 18:47:26 (30125): Guest Log: ATHENA_PROC_NUMBER=2
2025-04-21 18:47:26 (30125): Guest Log: ATHENA_CORE_NUMBER=2
2025-04-21 18:47:26 (30125): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-21 18:47:26 (30125): Guest Log:  *** Starting ATLAS job. (PandaID=6611096469 taskID=44179737) ***
2025-04-21 18:51:21 (30125): Guest Log:  *** Job finished ***
2025-04-21 18:51:21 (30125): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-21 18:51:21 (30125): Guest Log: 2025-04-21 16:50:46,872 | INFO     | [data] copytool_out thread has finished
2025-04-21 18:51:21 (30125): Guest Log: 2025-04-21 16:50:47,343 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-04-21 18:51:21 (30125): Guest Log: 2025-04-21 16:50:51,351 | INFO     | [data] queue_monitor thread has finished
2025-04-21 18:51:21 (30125): Guest Log: 2025-04-21 16:50:53,231 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140672273344320)>', '<ExcThread(monitor, started 140671822313216)>']
2025-04-21 18:51:21 (30125): Guest Log: 2025-04-21 16:50:53,478 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-21 18:51:21 (30125): Guest Log: 2025-04-21 16:50:53,478 | INFO     | [monitor] control thread has ended
2025-04-21 18:51:21 (30125): Guest Log: 2025-04-21 16:50:58,283 | INFO     | all workflow threads have been joined
2025-04-21 18:51:21 (30125): Guest Log: 2025-04-21 16:50:58,283 | INFO     | end of generic workflow (traces error code: 0)
2025-04-21 18:51:21 (30125): Guest Log: 2025-04-21 16:50:58,283 | INFO     | traces error code: 0
2025-04-21 18:51:21 (30125): Guest Log: 2025-04-21 16:50:58,283 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-21 18:51:21 (30125): Guest Log: 2025-04-21 16:50:58,385 [wrapper] ==== pilot stdout END ====
2025-04-21 18:51:21 (30125): Guest Log: 2025-04-21 16:50:58,392 [wrapper] ==== wrapper stdout RESUME ====
2025-04-21 18:51:21 (30125): Guest Log: 2025-04-21 16:50:58,400 [wrapper] pilotpid: 5806
2025-04-21 18:51:21 (30125): Guest Log: 2025-04-21 16:50:58,407 [wrapper] Pilot exit status: 0
2025-04-21 18:51:21 (30125): Guest Log: 2025-04-21 16:50:58,480 [wrapper] pandaids: 6611096469
2025-04-21 18:51:21 (30125): Guest Log: 2025-04-21 16:50:58,525 [wrapper] cleanup supervisor_pilot  5812 5807
2025-04-21 18:51:21 (30125): Guest Log: 2025-04-21 16:50:58,532 [wrapper] Test setup, not cleaning
2025-04-21 18:51:21 (30125): Guest Log: 2025-04-21 16:50:58,539 [wrapper] apfmon messages muted
2025-04-21 18:51:21 (30125): Guest Log: 2025-04-21 16:50:58,546 [wrapper] ==== wrapper stdout END ====
2025-04-21 18:51:21 (30125): Guest Log: 2025-04-21 16:50:58,553 [wrapper] ==== wrapper stderr END ====
2025-04-21 18:51:21 (30125): Guest Log:  *** Error codes and diagnostics ***
2025-04-21 18:51:21 (30125): Guest Log:     "exeErrorCode": 0,
2025-04-21 18:51:21 (30125): Guest Log:     "exeErrorDiag": "",
2025-04-21 18:51:21 (30125): Guest Log:     "pilotErrorCode": 1305,
2025-04-21 18:51:21 (30125): Guest Log:     "pilotErrorDiag": "Failed to execute payload:/bin/bash: Sim_tf.py: command not found",
2025-04-21 18:51:21 (30125): Guest Log:  *** Listing of results directory ***
2025-04-21 18:51:21 (30125): Guest Log: total 3852
2025-04-21 18:51:21 (30125): Guest Log: -rw-r--r--. 1 atlas atlas  495897 Apr 21 14:24 pilot3.tar.gz
2025-04-21 18:51:21 (30125): Guest Log: -rwx------. 1 atlas atlas   37140 Apr 21 14:25 runpilot2-wrapper.sh
2025-04-21 18:51:21 (30125): Guest Log: -rw-r--r--. 1 atlas atlas    5111 Apr 21 14:25 queuedata.json
2025-04-21 18:51:21 (30125): Guest Log: -rw-r--r--. 1 atlas atlas    8299 Apr 21 16:46 init_data.xml
2025-04-21 18:51:21 (30125): Guest Log: -rw-r-----. 1 atlas atlas  508859 Apr 21 16:46 input.tar.gz
2025-04-21 18:51:21 (30125): Guest Log: -rw-r-----. 1 atlas atlas   17569 Apr 21 16:46 start_atlas.sh
2025-04-21 18:51:21 (30125): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Apr 21 16:46 EVNT.44179733._000001.pool.root.1 -> /data/./ATLAS.root_0
2025-04-21 18:51:21 (30125): Guest Log: -rw-r--r--. 1 atlas atlas    2519 Apr 21 16:47 pandaJob.out
2025-04-21 18:51:21 (30125): Guest Log: -rw-------. 1 atlas atlas     424 Apr 21 16:47 setup.sh.local
2025-04-21 18:51:21 (30125): Guest Log: -rw-------. 1 atlas atlas  991268 Apr 21 16:47 agis_schedconf.cvmfs.json
2025-04-21 18:51:21 (30125): Guest Log: -rw-------. 1 atlas atlas 1618536 Apr 21 16:47 agis_ddmendpoints.agis.ALL.json
2025-04-21 18:51:21 (30125): Guest Log: drwx------. 4 atlas atlas    4096 Apr 21 16:47 pilot3
2025-04-21 18:51:21 (30125): Guest Log: -rw-------. 1 atlas atlas     284 Apr 21 16:48 memory_monitor_summary.json
2025-04-21 18:51:21 (30125): Guest Log: -rw-------. 1 atlas atlas    7576 Apr 21 16:48 log.44179737._000078.job.log.tgz.1
2025-04-21 18:51:21 (30125): Guest Log: -rw-------. 1 atlas atlas      95 Apr 21 16:49 pilot_heartbeat.json
2025-04-21 18:51:21 (30125): Guest Log: -rw-------. 1 atlas atlas    2187 Apr 21 16:50 heartbeat.json
2025-04-21 18:51:21 (30125): Guest Log: -rw-------. 1 atlas atlas    4413 Apr 21 16:50 pilotlog.txt
2025-04-21 18:51:21 (30125): Guest Log: -rw-------. 1 atlas atlas   71791 Apr 21 16:50 log.44179737._000078.job.log.1
2025-04-21 18:51:21 (30125): Guest Log: -rw-------. 1 atlas atlas     188 Apr 21 16:50 output.list
2025-04-21 18:51:21 (30125): Guest Log: -rw-r--r--. 1 atlas atlas     620 Apr 21 16:50 runtime_log
2025-04-21 18:51:21 (30125): Guest Log: -rw-------. 1 atlas atlas   92160 Apr 21 16:50 result.tar.gz
2025-04-21 18:51:21 (30125): Guest Log: -rw-r--r--. 1 atlas atlas   10815 Apr 21 16:50 runtime_log.err
2025-04-21 18:51:21 (30125): Guest Log: -rw-------. 1 atlas atlas     650 Apr 21 16:50 jqNNDmIG7Q7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmE97KDmV2oJun.diag
2025-04-21 18:51:21 (30125): Guest Log: Looking for outputfile HITS.44179737._000078.pool.root.1
2025-04-21 18:51:21 (30125): Guest Log: No HITS file was produced
2025-04-21 18:51:21 (30125): Guest Log: Successfully finished the ATLAS job!
2025-04-21 18:51:21 (30125): Guest Log: Copying the results back to the shared directory!
2025-04-21 18:51:21 (30125): Guest Log:  *** Contents of shared directory: ***
2025-04-21 18:51:21 (30125): Guest Log: total 197732
2025-04-21 18:51:21 (30125): Guest Log: -rw-rw----. 1 root root 201838520 Apr 21 16:45 ATLAS.root_0
2025-04-21 18:51:21 (30125): Guest Log: -rw-rw-r--. 1 root root      8299 Apr 21 16:45 init_data.xml
2025-04-21 18:51:21 (30125): Guest Log: -rw-rw----. 1 root root    508859 Apr 21 16:45 input.tar.gz
2025-04-21 18:51:21 (30125): Guest Log: -rw-r--r--. 1 root root     92160 Apr 21  2025 result.tar.gz
2025-04-21 18:51:21 (30125): Guest Log: -rw-rw----. 1 root root     17569 Apr 21 16:45 start_atlas.sh
2025-04-21 18:51:21 (30125): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-21 18:51:21 (30125): VM Completion File Detected.
2025-04-21 18:51:21 (30125): Powering off VM.
2025-04-21 18:51:21 (30125): Successfully stopped VM.
2025-04-21 18:51:21 (30125): Deregistering VM. (boinc_56a5eb512d1d99ed, slot#3)
2025-04-21 18:51:21 (30125): Removing network bandwidth throttle group from VM.
2025-04-21 18:51:21 (30125): Removing VM from VirtualBox.
18:51:26 (30125): called boinc_finish(0)

</stderr_txt>
]]>

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