Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
05:48:13 (2135339): wrapper (7.7.26015): starting
05:48:13 (2135339): wrapper: running run_atlas (--nthreads 12)
[2025-04-21 05:48:13] Arguments: --nthreads 12
[2025-04-21 05:48:13] Threads: 12
[2025-04-21 05:48:13] Checking for CVMFS
[2025-04-21 05:48:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-21 05:48:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-21 05:48:13] Running cvmfs_config stat atlas.cern.ch
[2025-04-21 05:48:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-21 05:48:13] 2.12.6.0 2000300 12 44960 145099 3 189 3923864 4096001 912 130560 0 309253 100.000 4 2 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.230:3128 1
[2025-04-21 05:48:13] CVMFS is ok
[2025-04-21 05:48:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-21 05:48:14] Checking for apptainer binary...
[2025-04-21 05:48:14] apptainer is not installed, using version from CVMFS
[2025-04-21 05:48:14] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-21 05:48:14] epyc7v12
[2025-04-21 05:48:14] apptainer works
[2025-04-21 05:48:14] Set ATHENA_PROC_NUMBER=12
[2025-04-21 05:48:14] Set ATHENA_CORE_NUMBER=12
[2025-04-21 05:48:14] Starting ATLAS job with PandaID=6610765140
[2025-04-21 05:48:14] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31418/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-21 05:51:11]  *** The last 200 lines of the pilot log: ***
[2025-04-21 05:51:11] 2025-04-21 05:50:56,722 | INFO     | ..............................
[2025-04-21 05:51:11] 2025-04-21 05:50:56,722 | INFO     | . Timing measurements:
[2025-04-21 05:51:11] 2025-04-21 05:50:56,722 | INFO     | . get job = 0 s
[2025-04-21 05:51:11] 2025-04-21 05:50:56,722 | INFO     | . initial setup = 1 s
[2025-04-21 05:51:11] 2025-04-21 05:50:56,722 | INFO     | . payload setup = 3 s
[2025-04-21 05:51:11] 2025-04-21 05:50:56,722 | INFO     | . stage-in = 0 s
[2025-04-21 05:51:11] 2025-04-21 05:50:56,722 | INFO     | . payload execution = 5 s
[2025-04-21 05:51:11] 2025-04-21 05:50:56,722 | INFO     | . stage-out = 0 s
[2025-04-21 05:51:11] 2025-04-21 05:50:56,722 | INFO     | . log creation = 0 s
[2025-04-21 05:51:11] 2025-04-21 05:50:56,722 | INFO     | ..............................
[2025-04-21 05:51:11] 2025-04-21 05:50:56,722 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-04-21 05:51:11] 2025-04-21 05:50:56,723 | INFO     | executing command: tail -n 20 /opt/boinc/instance_homes/boinc_31418/slots/1/PanDA_Pilot-6610765140/pilotlog.txt
[2025-04-21 05:51:11] 2025-04-21 05:50:56,739 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-04-21 05:51:11] - Log from pilotlog.txt -
[2025-04-21 05:51:11] 2025-04-21 05:50:56,720 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-21 05:51:11] 2025-04-21 05:50:56,720 | INFO     | using path: /opt/boinc/instance_homes/boinc_31418/slots/1/PanDA_Pilot-6610765140/memory_monitor_summary.json (trf name=prmon)
[2025-04-21 05:51:11] 2025-04-21 05:50:56,721 | INFO     | extracted standard info from prmon json
[2025-04-21 05:51:11] 2025-04-21 05:50:56,721 | INFO     | extracted standard memory fields from prmon json
[2025-04-21 05:51:11] 2025-04-21 05:50:56,721 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-21 05:51:11] 2025-04-21 05:50:56,721 | WARNING  | found no stored workdir sizes
[2025-04-21 05:51:11] 2025-04-21 05:50:56,721 | INFO     | will not add max space = 0 B to job metrics
[2025-04-21 05:51:11] 2025-04-21 05:50:56,722 | WARNING  | wrong length of table data, x=[1745214530.0], y=[0.0] (must be same and length>=4)
[2025-04-21 05:51:11] 2025-04-21 05:50:56,722 | INFO     | ..............................
[2025-04-21 05:51:11] 2025-04-21 05:50:56,722 | INFO     | . Timing measurements:
[2025-04-21 05:51:11] 2025-04-21 05:50:56,722 | INFO     | . get job = 0 s
[2025-04-21 05:51:11] 2025-04-21 05:50:56,722 | INFO     | . initial setup = 1 s
[2025-04-21 05:51:11] 2025-04-21 05:50:56,722 | INFO     | . payload setup = 3 s
[2025-04-21 05:51:11] 2025-04-21 05:50:56,722 | INFO     | . stage-in = 0 s
[2025-04-21 05:51:11] 2025-04-21 05:50:56,722 | INFO     | . payload execution = 5 s
[2025-04-21 05:51:11] 2025-04-21 05:50:56,722 | INFO     | . stage-out = 0 s
[2025-04-21 05:51:11] 2025-04-21 05:50:56,722 | INFO     | . log creation = 0 s
[2025-04-21 05:51:11] 2025-04-21 05:50:56,722 | INFO     | ..............................
[2025-04-21 05:51:11] 2025-04-21 05:50:56,722 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-04-21 05:51:11] 2025-04-21 05:50:56,723 | INFO     | executing command: tail -n 20 /opt/boinc/instance_homes/boinc_31418/slots/1/PanDA_Pilot-6610765140/pilotlog.txt
[2025-04-21 05:51:11] 2025-04-21 05:50:56,739 | WARNING  | 
[2025-04-21 05:51:11] [begin log extracts]
[2025-04-21 05:51:11] - Log from pilotlog.txt -
[2025-04-21 05:51:11] 2025-04-21 05:50:56,720 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-21 05:51:11] 2025-04-21 05:50:56,720 | INFO     | using path: /opt/boinc/instance_homes/boinc_31418/slots/1/PanDA_Pilot-6610765140/memory_monitor_summary.json (trf name=prmon)
[2025-04-21 05:51:11] 2025-04-21 05:50:56,721 | INFO     | extracted standard info from prmon json
[2025-04-21 05:51:11] 2025-04-21 05:50:56,721 | INFO     | extracted standard memory fields from prmon json
[2025-04-21 05:51:11] 2025-04-21 05:50:56,721 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-21 05:51:11] 2025-04-21 05:50:56,721 | WARNING  | found no stored workdir sizes
[2025-04-21 05:51:11] 2025-04-21 05:50:56,721 | INFO     | will not add max space = 0 B to job metrics
[2025-04-21 05:51:11] 2025-04-21 05:50:56,722 | WARNING  | wrong length of table data, x=[1745214530.0], y=[0.0] (must be same and length>=4)
[2025-04-21 05:51:11] 2025-04-21 05:50:56,722 | INFO     | ..............................
[2025-04-21 05:51:11] 2025-04-21 05:50:56,722 | INFO     | . Timing measurements:
[2025-04-21 05:51:11] 2025-04-21 05:50:56,722 | INFO     | . get job = 0 s
[2025-04-21 05:51:11] 2025-04-21 05:50:56,722 | INFO     | . initial setup = 1 s
[2025-04-21 05:51:11] 2025-04-21 05:50:56,722 | INFO     | . payload setup = 3 s
[2025-04-21 05:51:11] 2025-04-21 05:50:56,722 | INFO     | . stage-in = 0 s
[2025-04-21 05:51:11] 2025-04-21 05:50:56,722 | INFO     | . payload execution = 5 s
[2025-04-21 05:51:11] 2025-04-21 05:50:56,722 | INFO     | . stage-out = 0 s
[2025-04-21 05:51:11] 2025-04-21 05:50:56,722 | INFO     | . log creation = 0 s
[2025-04-21 05:51:11] 2025-04-21 05:50:56,722 | INFO     | ..............................
[2025-04-21 05:51:11] 2025-04-21 05:50:56,722 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-04-21 05:51:11] 2025-04-21 05:50:56,723 | INFO     | executing command: tail -n 20 /opt/boinc/instance_homes/boinc_31418/slots/1/PanDA_Pilot-6610765140/pilotlog.txt
[2025-04-21 05:51:11] [end log extracts]
[2025-04-21 05:51:11] 2025-04-21 05:50:56,739 | WARNING  | pilotErrorCodes = [1305, 1187] (will report primary/first error code)
[2025-04-21 05:51:11] 2025-04-21 05:50:56,740 | WARNING  | pilotErrorDiags = ['Failed to execute payload:/bin/bash: Sim_tf.py: command not found', 'Payload metadata does not exist'] (will report primary/first error diag)
[2025-04-21 05:51:11] 2025-04-21 05:50:56,985 | INFO     | 
[2025-04-21 05:51:11] 2025-04-21 05:50:56,985 | INFO     | job summary report
[2025-04-21 05:51:11] 2025-04-21 05:50:56,985 | INFO     | --------------------------------------------------
[2025-04-21 05:51:11] 2025-04-21 05:50:56,985 | INFO     | PanDA job id: 6610765140
[2025-04-21 05:51:11] 2025-04-21 05:50:56,985 | INFO     | task id: 44178686
[2025-04-21 05:51:11] 2025-04-21 05:50:56,985 | INFO     | error 1/2: 1305: Failed to execute payload:/bin/bash: Sim_tf.py: command not found
[2025-04-21 05:51:11] 
[2025-04-21 05:51:11] 2025-04-21 05:50:56,985 | INFO     | error 2/2: 1187: Payload metadata does not exist
[2025-04-21 05:51:11] 2025-04-21 05:50:56,985 | INFO     | pilot error code: 1187
[2025-04-21 05:51:11] 2025-04-21 05:50:56,985 | INFO     | pilot error diag: metadata does not exist: /opt/boinc/instance_homes/boinc_31418/slots/1/PanDA_Pilot-6610765140/metadata.xml
[2025-04-21 05:51:11] 2025-04-21 05:50:56,985 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-21 05:51:11] 2025-04-21 05:50:56,986 | INFO     | pilot state: failed 
[2025-04-21 05:51:11] 2025-04-21 05:50:56,986 | INFO     | transexitcode: 127
[2025-04-21 05:51:11] 2025-04-21 05:50:56,986 | INFO     | exeerrorcode: 0
[2025-04-21 05:51:11] 2025-04-21 05:50:56,986 | INFO     | exeerrordiag: 
[2025-04-21 05:51:11] 2025-04-21 05:50:56,986 | INFO     | exitcode: 0
[2025-04-21 05:51:11] 2025-04-21 05:50:56,986 | INFO     | exitmsg: 
[2025-04-21 05:51:11] 2025-04-21 05:50:56,986 | INFO     | cpuconsumptiontime: 13 s
[2025-04-21 05:51:11] 2025-04-21 05:50:56,986 | INFO     | nevents: 0
[2025-04-21 05:51:11] 2025-04-21 05:50:56,986 | INFO     | neventsw: 0
[2025-04-21 05:51:11] 2025-04-21 05:50:56,986 | INFO     | pid: 2153071
[2025-04-21 05:51:11] 2025-04-21 05:50:56,986 | INFO     | pgrp: 2153071
[2025-04-21 05:51:11] 2025-04-21 05:50:56,986 | INFO     | corecount: 12
[2025-04-21 05:51:11] 2025-04-21 05:50:56,986 | INFO     | event service: False
[2025-04-21 05:51:11] 2025-04-21 05:50:56,986 | INFO     | sizes: {0: 2426788, 5: 2426994, 11: 2427050, 12: 2431417, 13: 2435706, 136: 2435650}
[2025-04-21 05:51:11] 2025-04-21 05:50:56,986 | INFO     | --------------------------------------------------
[2025-04-21 05:51:11] 2025-04-21 05:50:56,987 | INFO     | 
[2025-04-21 05:51:11] 2025-04-21 05:50:56,987 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31418/slots/1
[2025-04-21 05:51:11] 2025-04-21 05:50:57,009 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-21 05:51:11] 2025-04-21 05:50:57,010 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-21 05:51:11] 2025-04-21 05:50:57,010 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-21 05:51:11] 2025-04-21 05:50:57,010 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-21 05:51:11] 2025-04-21 05:50:57,010 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-21 05:51:11] 2025-04-21 05:50:57,010 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-21 05:51:11] 2025-04-21 05:50:57,010 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-21 05:51:11] 2025-04-21 05:50:57,011 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-21 05:51:11] 2025-04-21 05:50:57,011 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-21 05:51:11] 2025-04-21 05:50:57,011 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-21 05:51:11] 2025-04-21 05:50:57,011 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-21 05:51:11] 2025-04-21 05:50:57,011 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-21 05:51:11] 2025-04-21 05:50:57,011 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-21 05:51:11] 2025-04-21 05:50:57,011 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-21 05:51:11] 2025-04-21 05:50:57,011 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-21 05:51:11] 2025-04-21 05:50:57,011 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-21 05:51:11] 2025-04-21 05:50:57,011 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-21 05:51:11] 2025-04-21 05:50:57,012 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-21 05:51:11] 2025-04-21 05:50:57,012 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-21 05:51:11] 2025-04-21 05:50:57,012 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-21 05:51:11] 2025-04-21 05:50:57,012 | INFO     | job 6610765140 has completed (purged errors)
[2025-04-21 05:51:11] 2025-04-21 05:50:57,012 | INFO     | overall cleanup function is called
[2025-04-21 05:51:11] 2025-04-21 05:50:58,015 | INFO     | --- collectZombieJob: --- 10, [2153071]
[2025-04-21 05:51:11] 2025-04-21 05:50:58,015 | INFO     | zombie collector waiting for pid 2153071
[2025-04-21 05:51:11] 2025-04-21 05:50:58,015 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-21 05:51:11] 2025-04-21 05:50:58,015 | INFO     | collected zombie processes
[2025-04-21 05:51:11] 2025-04-21 05:50:58,015 | INFO     | will attempt to kill all subprocesses of pid=2153071
[2025-04-21 05:51:11] 2025-04-21 05:50:58,236 | INFO     | process IDs to be killed: [2153071] (in reverse order)
[2025-04-21 05:51:11] 2025-04-21 05:50:58,332 | WARNING  | found no corresponding commands to process id(s)
[2025-04-21 05:51:11] 2025-04-21 05:50:58,333 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-21 05:51:11] 2025-04-21 05:50:58,345 | INFO     | did not find any defunct processes belonging to 2153071
[2025-04-21 05:51:11] 2025-04-21 05:50:58,352 | INFO     | did not find any defunct processes belonging to 2153071
[2025-04-21 05:51:11] 2025-04-21 05:50:58,352 | INFO     | ready for new job
[2025-04-21 05:51:11] 2025-04-21 05:50:58,353 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-21 05:51:11] 2025-04-21 05:50:58,353 | INFO     | **************************************
[2025-04-21 05:51:11] 2025-04-21 05:50:58,353 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-21 05:51:11] 2025-04-21 05:50:58,353 | INFO     | **************************************
[2025-04-21 05:51:11] 2025-04-21 05:50:58,353 | INFO     | 
[2025-04-21 05:51:11] 2025-04-21 05:50:58,385 | INFO     | architecture information:
[2025-04-21 05:51:11] 2025-04-21 05:50:58,385 | INFO     | executing command: cat /etc/os-release
[2025-04-21 05:51:11] 2025-04-21 05:50:58,403 | INFO     | cat /etc/os-release:
[2025-04-21 05:51:11] NAME="CentOS Linux"
[2025-04-21 05:51:11] VERSION="7 (Core)"
[2025-04-21 05:51:11] ID="centos"
[2025-04-21 05:51:11] ID_LIKE="rhel fedora"
[2025-04-21 05:51:11] VERSION_ID="7"
[2025-04-21 05:51:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-21 05:51:11] ANSI_COLOR="0;31"
[2025-04-21 05:51:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-21 05:51:11] HOME_URL="https://www.centos.org/"
[2025-04-21 05:51:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-21 05:51:11] 
[2025-04-21 05:51:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-21 05:51:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-21 05:51:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-21 05:51:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-21 05:51:11] 
[2025-04-21 05:51:11] 2025-04-21 05:50:58,403 | INFO     | **************************************
[2025-04-21 05:51:11] 2025-04-21 05:50:58,906 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31418/slots/1
[2025-04-21 05:51:11] 2025-04-21 05:50:58,923 | INFO     | sufficient remaining disk space (331815583744 B)
[2025-04-21 05:51:11] 2025-04-21 05:50:58,923 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-21 05:51:11] 2025-04-21 05:50:58,924 | INFO     | current server update state: UPDATING_FINAL
[2025-04-21 05:51:11] 2025-04-21 05:50:58,924 | INFO     | update_server=False
[2025-04-21 05:51:11] 2025-04-21 05:50:58,924 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-21 05:51:11] 2025-04-21 05:50:59,174 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-21 05:51:11] 2025-04-21 05:50:59,175 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-21 05:51:11] 2025-04-21 05:50:59,175 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-21 05:51:11] 2025-04-21 05:50:59,175 | INFO     | will abort loop
[2025-04-21 05:51:11] 2025-04-21 05:50:59,202 | INFO     | all data control threads have been joined
[2025-04-21 05:51:11] 2025-04-21 05:50:59,475 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-21 05:51:11] 2025-04-21 05:50:59,672 | INFO     | all payload control threads have been joined
[2025-04-21 05:51:11] 2025-04-21 05:50:59,929 | INFO     | [job] retrieve thread has finished
[2025-04-21 05:51:11] 2025-04-21 05:50:59,942 | INFO     | all job control threads have been joined
[2025-04-21 05:51:11] 2025-04-21 05:50:59,942 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-21 05:51:11] 2025-04-21 05:50:59,964 | INFO     | PID=2140087 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-21 05:51:11] 2025-04-21 05:50:59,964 | INFO     | .. there are 3 such processes running
[2025-04-21 05:51:11] 2025-04-21 05:50:59,965 | INFO     | found 0 job(s) in 20 queues
[2025-04-21 05:51:11] 2025-04-21 05:50:59,965 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-21 05:51:11] 2025-04-21 05:50:59,965 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-21 05:51:11] 2025-04-21 05:51:00,180 | INFO     | [job] job monitor thread has finished
[2025-04-21 05:51:11] 2025-04-21 05:51:00,208 | INFO     | [data] control thread has finished
[2025-04-21 05:51:11] 2025-04-21 05:51:00,335 | INFO     | [payload] execute_payloads thread has finished
[2025-04-21 05:51:11] 2025-04-21 05:51:00,486 | INFO     | [data] copytool_in thread has finished
[2025-04-21 05:51:11] 2025-04-21 05:51:00,677 | INFO     | [payload] control thread has finished
[2025-04-21 05:51:11] 2025-04-21 05:51:00,843 | INFO     | [payload] failed_post thread has finished
[2025-04-21 05:51:11] 2025-04-21 05:51:00,947 | INFO     | [job] control thread has finished
[2025-04-21 05:51:11] 2025-04-21 05:51:01,047 | INFO     | [job] validate thread has finished
[2025-04-21 05:51:11] 2025-04-21 05:51:01,059 | INFO     | [payload] validate_post thread has finished
[2025-04-21 05:51:11] 2025-04-21 05:51:01,272 | INFO     | [job] create_data_payload thread has finished
[2025-04-21 05:51:11] 2025-04-21 05:51:01,419 | INFO     | [payload] validate_pre thread has finished
[2025-04-21 05:51:11] 2025-04-21 05:51:01,480 | INFO     | [data] copytool_out thread has finished
[2025-04-21 05:51:11] 2025-04-21 05:51:01,719 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-21 05:51:11] 2025-04-21 05:51:01,807 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-21 05:51:11] 2025-04-21 05:51:02,811 | INFO     | [job] queue monitor thread has finished
[2025-04-21 05:51:11] 2025-04-21 05:51:05,724 | INFO     | [data] queue_monitor thread has finished
[2025-04-21 05:51:11] 2025-04-21 05:51:06,564 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140176212752192)>', '<ExcThread(monitor, started 140175652943616)>']
[2025-04-21 05:51:11] 2025-04-21 05:51:06,997 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-21 05:51:11] 2025-04-21 05:51:06,997 | INFO     | [monitor] control thread has ended
[2025-04-21 05:51:11] 2025-04-21 05:51:11,589 | INFO     | all workflow threads have been joined
[2025-04-21 05:51:11] 2025-04-21 05:51:11,590 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-21 05:51:11] 2025-04-21 05:51:11,590 | INFO     | traces error code: 0
[2025-04-21 05:51:11] 2025-04-21 05:51:11,590 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-21 05:51:11] 2025-04-21 05:51:11,659 [wrapper] ==== pilot stdout END ====
[2025-04-21 05:51:11] 2025-04-21 05:51:11,663 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-21 05:51:11] 2025-04-21 05:51:11,668 [wrapper] pilotpid: 2140087
[2025-04-21 05:51:11] 2025-04-21 05:51:11,672 [wrapper] Pilot exit status: 0
[2025-04-21 05:51:11] 2025-04-21 05:51:11,685 [wrapper] pandaids: 6610765140
[2025-04-21 05:51:11] 2025-04-21 05:51:11,748 [wrapper] cleanup supervisor_pilot 2140093 2140088
[2025-04-21 05:51:11] 2025-04-21 05:51:11,752 [wrapper] Test setup, not cleaning
[2025-04-21 05:51:11] 2025-04-21 05:51:11,756 [wrapper] apfmon messages muted
[2025-04-21 05:51:11] 2025-04-21 05:51:11,760 [wrapper] ==== wrapper stdout END ====
[2025-04-21 05:51:11] 2025-04-21 05:51:11,763 [wrapper] ==== wrapper stderr END ====
[2025-04-21 05:51:11]  *** Error codes and diagnostics ***
[2025-04-21 05:51:11]     "exeErrorCode": 0,
[2025-04-21 05:51:11]     "exeErrorDiag": "",
[2025-04-21 05:51:11]     "pilotErrorCode": 1305,
[2025-04-21 05:51:11]     "pilotErrorDiag": "Failed to execute payload:/bin/bash: Sim_tf.py: command not found",
[2025-04-21 05:51:11]  *** Listing of results directory ***
[2025-04-21 05:51:11] total 316220
[2025-04-21 05:51:11] -rw-r--r-- 1 boinc boinc    495897 Apr 21 05:04 pilot3.tar.gz
[2025-04-21 05:51:11] -rwx------ 1 boinc boinc     37140 Apr 21 05:15 runpilot2-wrapper.sh
[2025-04-21 05:51:11] -rw-r--r-- 1 boinc boinc      5111 Apr 21 05:15 queuedata.json
[2025-04-21 05:51:11] -rw-rw-r-- 1 boinc boinc       100 Apr 21 05:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-21 05:51:11] -rwxr-xr-x 1 boinc boinc      7986 Apr 21 05:48 run_atlas
[2025-04-21 05:51:11] -rw-rw-r-- 1 boinc boinc       105 Apr 21 05:48 job.xml
[2025-04-21 05:51:11] -rw-r--r-- 2 boinc boinc     17569 Apr 21 05:48 start_atlas.sh
[2025-04-21 05:51:11] drwxrwx--x 2 boinc boinc      4096 Apr 21 05:48 shared
[2025-04-21 05:51:11] -rw-r--r-- 2 boinc boinc    508873 Apr 21 05:48 input.tar.gz
[2025-04-21 05:51:11] -rw-rw-r-- 1 boinc boinc      6940 Apr 21 05:48 init_data.xml
[2025-04-21 05:51:11] -rw-r--r-- 2 boinc boinc 319793974 Apr 21 05:48 EVNT.44178683._000001.pool.root.1
[2025-04-21 05:51:11] -rw-rw-r-- 1 boinc boinc         0 Apr 21 05:48 boinc_lockfile
[2025-04-21 05:51:11] -rw-rw-r-- 1 boinc boinc      2574 Apr 21 05:48 pandaJob.out
[2025-04-21 05:51:11] -rw------- 1 boinc boinc       424 Apr 21 05:48 setup.sh.local
[2025-04-21 05:51:11] -rw------- 1 boinc boinc    991292 Apr 21 05:48 agis_schedconf.cvmfs.json
[2025-04-21 05:51:11] -rw------- 1 boinc boinc   1618536 Apr 21 05:48 agis_ddmendpoints.agis.ALL.json
[2025-04-21 05:51:11] drwx------ 4 boinc boinc      4096 Apr 21 05:48 pilot3
[2025-04-21 05:51:11] -rw------- 1 boinc boinc       877 Apr 21 05:48 memory_monitor_summary.json
[2025-04-21 05:51:11] -rw------- 1 boinc boinc      7663 Apr 21 05:48 log.44178686._000053.job.log.tgz.1
[2025-04-21 05:51:11] -rw------- 1 boinc boinc        95 Apr 21 05:50 pilot_heartbeat.json
[2025-04-21 05:51:11] -rw------- 1 boinc boinc      2515 Apr 21 05:50 heartbeat.json
[2025-04-21 05:51:11] -rw-rw-r-- 1 boinc boinc       523 Apr 21 05:51 boinc_task_state.xml
[2025-04-21 05:51:11] -rw-rw-r-- 1 boinc boinc      8192 Apr 21 05:51 boinc_mmap_file
[2025-04-21 05:51:11] -rw-rw-r-- 1 boinc boinc        22 Apr 21 05:51 wrapper_checkpoint.txt
[2025-04-21 05:51:11] -rw------- 1 boinc boinc      4957 Apr 21 05:51 pilotlog.txt
[2025-04-21 05:51:11] -rw------- 1 boinc boinc     74026 Apr 21 05:51 log.44178686._000053.job.log.1
[2025-04-21 05:51:11] -rw------- 1 boinc boinc       188 Apr 21 05:51 output.list
[2025-04-21 05:51:11] -rw-rw-r-- 1 boinc boinc       620 Apr 21 05:51 runtime_log
[2025-04-21 05:51:11] -rw------- 1 boinc boinc     92160 Apr 21 05:51 result.tar.gz
[2025-04-21 05:51:11] -rw------- 1 boinc boinc       637 Apr 21 05:51 sCyKDm8fyQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmhFlLDm9KOMQn.diag
[2025-04-21 05:51:11] -rw-rw-r-- 1 boinc boinc     11256 Apr 21 05:51 runtime_log.err
[2025-04-21 05:51:11] -rw-rw-r-- 1 boinc boinc     21215 Apr 21 05:51 stderr.txt
[2025-04-21 05:51:11] No HITS result produced
[2025-04-21 05:51:11]  *** Contents of shared directory: ***
[2025-04-21 05:51:11] total 312916
[2025-04-21 05:51:11] -rw-r--r-- 2 boinc boinc     17569 Apr 21 05:48 start_atlas.sh
[2025-04-21 05:51:11] -rw-r--r-- 2 boinc boinc    508873 Apr 21 05:48 input.tar.gz
[2025-04-21 05:51:11] -rw-r--r-- 2 boinc boinc 319793974 Apr 21 05:48 ATLAS.root_0
[2025-04-21 05:51:11] -rw------- 1 boinc boinc     92160 Apr 21 05:51 result.tar.gz
05:51:12 (2135339): run_atlas exited; CPU time 23.283782
05:51:12 (2135339): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN