Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
05:35:57 (2001016): wrapper (7.7.26015): starting
05:35:57 (2001016): wrapper: running run_atlas (--nthreads 12)
[2025-04-21 05:35:57] Arguments: --nthreads 12
[2025-04-21 05:35:57] Threads: 12
[2025-04-21 05:35:57] Checking for CVMFS
[2025-04-21 05:35:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-21 05:35:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-21 05:35:57] Running cvmfs_config stat atlas.cern.ch
[2025-04-21 05:35:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-21 05:35:58] 2.12.6.0 2000300 0 26164 145099 3 5 3923848 4096001 23 130560 0 1555 100.000 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.230:3128 1
[2025-04-21 05:35:58] CVMFS is ok
[2025-04-21 05:35:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-21 05:35:58] Checking for apptainer binary...
[2025-04-21 05:35:58] apptainer is not installed, using version from CVMFS
[2025-04-21 05:35:58] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-21 05:35:58] epyc7v12
[2025-04-21 05:35:58] apptainer works
[2025-04-21 05:35:58] Set ATHENA_PROC_NUMBER=12
[2025-04-21 05:35:58] Set ATHENA_CORE_NUMBER=12
[2025-04-21 05:35:58] Starting ATLAS job with PandaID=6610773275
[2025-04-21 05:35:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31418/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-21 06:18:15]  *** The last 200 lines of the pilot log: ***
[2025-04-21 06:18:15] ]
[2025-04-21 06:18:15] 2025-04-21 06:17:43,849 | INFO     | transferring file log.44075483._099177.job.log.tgz.1 from /opt/boinc/instance_homes/boinc_31418/slots/2/PanDA_Pilot-6610773275/log.44075483._099177.job.log.tgz.1 t
[2025-04-21 06:18:15] 2025-04-21 06:17:43,849 | INFO     | executing command: /usr/bin/env mv /opt/boinc/instance_homes/boinc_31418/slots/2/PanDA_Pilot-6610773275/log.44075483._099177.job.log.tgz.1 /opt/boinc/instance_home
[2025-04-21 06:18:15] 2025-04-21 06:17:43,870 | INFO     | adding to output.list: log.44075483._099177.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/50/a0/log.44075483._099177.job.log.tg
[2025-04-21 06:18:15] 2025-04-21 06:17:43,871 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-21 06:18:15] 2025-04-21 06:17:43,871 | INFO     | summary of transferred files:
[2025-04-21 06:18:15] 2025-04-21 06:17:43,871 | INFO     |  -- lfn=log.44075483._099177.job.log.tgz.1, status_code=0, status=transferred
[2025-04-21 06:18:15] 2025-04-21 06:17:43,871 | INFO     | stage-out finished correctly
[2025-04-21 06:18:15] 2025-04-21 06:17:46,287 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-21 06:18:15] 2025-04-21 06:17:46,800 | WARNING  | process 2027667 can no longer be monitored (due to stat problems) - aborting
[2025-04-21 06:18:15] 2025-04-21 06:17:46,800 | INFO     | using path: /opt/boinc/instance_homes/boinc_31418/slots/2/PanDA_Pilot-6610773275/memory_monitor_summary.json (trf name=prmon)
[2025-04-21 06:18:15] 2025-04-21 06:17:46,801 | INFO     | using path: /opt/boinc/instance_homes/boinc_31418/slots/2/PanDA_Pilot-6610773275/memory_monitor_summary.json (trf name=prmon)
[2025-04-21 06:18:15] 2025-04-21 06:17:46,801 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3759581 B
[2025-04-21 06:18:15] 2025-04-21 06:17:46,801 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15594 B
[2025-04-21 06:18:15] 2025-04-21 06:17:46,801 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31418/slots/2
[2025-04-21 06:18:15] 2025-04-21 06:17:46,819 | INFO     | sufficient remaining disk space (332825362432 B)
[2025-04-21 06:18:15] 2025-04-21 06:17:46,820 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-04-21 06:18:15] 2025-04-21 06:17:46,821 | INFO     | size of work directory /opt/boinc/instance_homes/boinc_31418/slots/2/PanDA_Pilot-6610773275: 4042369 B (within 2537553920 B limit)
[2025-04-21 06:18:15] 2025-04-21 06:17:46,821 | INFO     | pfn file=/opt/boinc/instance_homes/boinc_31418/slots/2/PanDA_Pilot-6610773275/HITS.44075483._099177.pool.root.1 does not exist (skip from workdir size calculation)
[2025-04-21 06:18:15] 2025-04-21 06:17:46,821 | INFO     | total size of present files: 0 B (workdir size: 4042369 B)
[2025-04-21 06:18:15] 2025-04-21 06:17:46,821 | INFO     | output file size check: skipping output file /opt/boinc/instance_homes/boinc_31418/slots/2/PanDA_Pilot-6610773275/HITS.44075483._099177.pool.root.1 since it does n
[2025-04-21 06:18:15] 2025-04-21 06:17:47,026 | INFO     | number of running child processes to parent process 2027667: 1
[2025-04-21 06:18:15] 2025-04-21 06:17:47,026 | INFO     | maximum number of monitored processes: 6
[2025-04-21 06:18:15] 2025-04-21 06:17:47,350 | INFO     | job 6610773275 has state=finished
[2025-04-21 06:18:15] 2025-04-21 06:17:47,351 | INFO     | preparing for final server update for job 6610773275 in state='finished'
[2025-04-21 06:18:15] 2025-04-21 06:17:47,351 | INFO     | this job has now completed (state=finished)
[2025-04-21 06:18:15] 2025-04-21 06:17:47,351 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-21 06:18:15] 2025-04-21 06:17:47,352 | INFO     | log transfer has been attempted: DONE
[2025-04-21 06:18:15] 2025-04-21 06:17:47,352 | INFO     | job 6610773275 has finished - writing final server update
[2025-04-21 06:18:15] 2025-04-21 06:17:47,352 | INFO     | total number of processed events: 400 (read)
[2025-04-21 06:18:15] 2025-04-21 06:17:47,382 | INFO     | executing command: lscpu
[2025-04-21 06:18:15] 2025-04-21 06:17:47,503 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-21 06:18:15] 2025-04-21 06:17:49,527 | INFO     | monitor loop #191: job 0:6610773275 is in state 'finished'
[2025-04-21 06:18:15] 2025-04-21 06:17:49,527 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-21 06:18:15] 2025-04-21 06:17:49,708 | INFO     | PID=2008983 has CPU usage=8.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-21 06:18:15] 2025-04-21 06:17:52,031 | INFO     | monitor loop #192: job 0:6610773275 is in state 'finished'
[2025-04-21 06:18:15] 2025-04-21 06:17:52,031 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-21 06:18:15] 2025-04-21 06:17:54,534 | INFO     | monitor loop #193: job 0:6610773275 is in state 'finished'
[2025-04-21 06:18:15] 2025-04-21 06:17:54,534 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-21 06:18:15] 2025-04-21 06:17:55,858 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-21 06:18:15] 2025-04-21 06:17:55,858 | INFO     | using path: /opt/boinc/instance_homes/boinc_31418/slots/2/PanDA_Pilot-6610773275/memory_monitor_summary.json (trf name=prmon)
[2025-04-21 06:18:15] 2025-04-21 06:17:55,859 | INFO     | extracted standard info from prmon json
[2025-04-21 06:18:15] 2025-04-21 06:17:55,859 | INFO     | extracted standard memory fields from prmon json
[2025-04-21 06:18:15] 2025-04-21 06:17:55,859 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-21 06:18:15] 2025-04-21 06:17:55,860 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-21 06:18:15] 2025-04-21 06:17:55,860 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-21 06:18:15] 2025-04-21 06:17:55,861 | INFO     | fitting pss+swap vs Time
[2025-04-21 06:18:15] 2025-04-21 06:17:55,861 | INFO     | sum of square deviations: 12176972.5
[2025-04-21 06:18:15] 2025-04-21 06:17:55,862 | INFO     | sum of deviations: 6091755575.499999
[2025-04-21 06:18:15] 2025-04-21 06:17:55,862 | INFO     | mean x: 1745215110.5
[2025-04-21 06:18:15] 2025-04-21 06:17:55,862 | INFO     | mean y: 2743190.029411765
[2025-04-21 06:18:15] 2025-04-21 06:17:55,862 | INFO     | -- intersect: -873073374854.5192
[2025-04-21 06:18:15] 2025-04-21 06:17:55,862 | INFO     | intersect: -873073374854.5192
[2025-04-21 06:18:15] 2025-04-21 06:17:55,862 | INFO     | chi2: 1.3933022043515362
[2025-04-21 06:18:15] 2025-04-21 06:17:55,862 | INFO     | -- intersect: -873073374854.5192
[2025-04-21 06:18:15] 2025-04-21 06:17:55,863 | INFO     | current memory leak: 500.27 B/s (using 34 data points, chi2=1.39)
[2025-04-21 06:18:15] 2025-04-21 06:17:55,863 | INFO     | ..............................
[2025-04-21 06:18:15] 2025-04-21 06:17:55,863 | INFO     | . Timing measurements:
[2025-04-21 06:18:15] 2025-04-21 06:17:55,863 | INFO     | . get job = 0 s
[2025-04-21 06:18:15] 2025-04-21 06:17:55,863 | INFO     | . initial setup = 1 s
[2025-04-21 06:18:15] 2025-04-21 06:17:55,863 | INFO     | . payload setup = 7 s
[2025-04-21 06:18:15] 2025-04-21 06:17:55,863 | INFO     | . stage-in = 0 s
[2025-04-21 06:18:15] 2025-04-21 06:17:55,864 | INFO     | . payload execution = 2465 s
[2025-04-21 06:18:15] 2025-04-21 06:17:55,864 | INFO     | . stage-out = 0 s
[2025-04-21 06:18:15] 2025-04-21 06:17:55,864 | INFO     | . log creation = 0 s
[2025-04-21 06:18:15] 2025-04-21 06:17:55,864 | INFO     | ..............................
[2025-04-21 06:18:15] 2025-04-21 06:17:56,119 | INFO     | 
[2025-04-21 06:18:15] 2025-04-21 06:17:56,119 | INFO     | job summary report
[2025-04-21 06:18:15] 2025-04-21 06:17:56,119 | INFO     | --------------------------------------------------
[2025-04-21 06:18:15] 2025-04-21 06:17:56,119 | INFO     | PanDA job id: 6610773275
[2025-04-21 06:18:15] 2025-04-21 06:17:56,120 | INFO     | task id: 44075483
[2025-04-21 06:18:15] 2025-04-21 06:17:56,120 | INFO     | errors: (none)
[2025-04-21 06:18:15] 2025-04-21 06:17:56,120 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-21 06:18:15] 2025-04-21 06:17:56,120 | INFO     | pilot state: finished 
[2025-04-21 06:18:15] 2025-04-21 06:17:56,120 | INFO     | transexitcode: 0
[2025-04-21 06:18:15] 2025-04-21 06:17:56,120 | INFO     | exeerrorcode: 0
[2025-04-21 06:18:15] 2025-04-21 06:17:56,120 | INFO     | exeerrordiag: 
[2025-04-21 06:18:15] 2025-04-21 06:17:56,120 | INFO     | exitcode: 0
[2025-04-21 06:18:15] 2025-04-21 06:17:56,120 | INFO     | exitmsg: OK
[2025-04-21 06:18:15] 2025-04-21 06:17:56,120 | INFO     | cpuconsumptiontime: 20689 s
[2025-04-21 06:18:15] 2025-04-21 06:17:56,120 | INFO     | nevents: 400
[2025-04-21 06:18:15] 2025-04-21 06:17:56,120 | INFO     | neventsw: 0
[2025-04-21 06:18:15] 2025-04-21 06:17:56,121 | INFO     | pid: 2027667
[2025-04-21 06:18:15] 2025-04-21 06:17:56,121 | INFO     | pgrp: 2027667
[2025-04-21 06:18:15] 2025-04-21 06:17:56,121 | INFO     | corecount: 12
[2025-04-21 06:18:15] 2025-04-21 06:17:56,121 | INFO     | event service: False
[2025-04-21 06:18:15] 2025-04-21 06:17:56,121 | INFO     | sizes: {0: 2425943, 1: 2426822, 6: 2427028, 12: 2427056, 2476: 2452225, 2477: 2452224, 2478: 2461395, 2480: 2461451, 2490: 2461649}
[2025-04-21 06:18:15] 2025-04-21 06:17:56,121 | INFO     | --------------------------------------------------
[2025-04-21 06:18:15] 2025-04-21 06:17:56,121 | INFO     | 
[2025-04-21 06:18:15] 2025-04-21 06:17:56,121 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31418/slots/2
[2025-04-21 06:18:15] 2025-04-21 06:17:56,147 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-21 06:18:15] 2025-04-21 06:17:56,147 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-21 06:18:15] 2025-04-21 06:17:56,147 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-21 06:18:15] 2025-04-21 06:17:56,147 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-21 06:18:15] 2025-04-21 06:17:56,147 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-21 06:18:15] 2025-04-21 06:17:56,148 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-21 06:18:15] 2025-04-21 06:17:56,148 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-21 06:18:15] 2025-04-21 06:17:56,148 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-21 06:18:15] 2025-04-21 06:17:56,148 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-21 06:18:15] 2025-04-21 06:17:56,148 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-21 06:18:15] 2025-04-21 06:17:56,148 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-21 06:18:15] 2025-04-21 06:17:56,148 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-21 06:18:15] 2025-04-21 06:17:56,148 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-21 06:18:15] 2025-04-21 06:17:56,148 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-21 06:18:15] 2025-04-21 06:17:56,148 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-21 06:18:15] 2025-04-21 06:17:56,149 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-21 06:18:15] 2025-04-21 06:17:56,149 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-21 06:18:15] 2025-04-21 06:17:56,149 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-21 06:18:15] 2025-04-21 06:17:56,149 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-21 06:18:15] 2025-04-21 06:17:56,149 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-21 06:18:15] 2025-04-21 06:17:56,149 | INFO     | job 6610773275 has completed (purged errors)
[2025-04-21 06:18:15] 2025-04-21 06:17:56,149 | INFO     | overall cleanup function is called
[2025-04-21 06:18:15] 2025-04-21 06:17:57,159 | INFO     | --- collectZombieJob: --- 10, [2027667]
[2025-04-21 06:18:15] 2025-04-21 06:17:57,159 | INFO     | zombie collector waiting for pid 2027667
[2025-04-21 06:18:15] 2025-04-21 06:17:57,159 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-21 06:18:15] 2025-04-21 06:17:57,160 | INFO     | collected zombie processes
[2025-04-21 06:18:15] 2025-04-21 06:17:57,160 | INFO     | will attempt to kill all subprocesses of pid=2027667
[2025-04-21 06:18:15] 2025-04-21 06:17:57,367 | INFO     | process IDs to be killed: [2027667] (in reverse order)
[2025-04-21 06:18:15] 2025-04-21 06:17:57,458 | WARNING  | found no corresponding commands to process id(s)
[2025-04-21 06:18:15] 2025-04-21 06:17:57,458 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-21 06:18:15] 2025-04-21 06:17:57,470 | INFO     | did not find any defunct processes belonging to 2027667
[2025-04-21 06:18:15] 2025-04-21 06:17:57,476 | INFO     | did not find any defunct processes belonging to 2027667
[2025-04-21 06:18:15] 2025-04-21 06:17:57,476 | INFO     | ready for new job
[2025-04-21 06:18:15] 2025-04-21 06:17:57,476 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-21 06:18:15] 2025-04-21 06:17:57,477 | INFO     | **************************************
[2025-04-21 06:18:15] 2025-04-21 06:17:57,477 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-21 06:18:15] 2025-04-21 06:17:57,477 | INFO     | **************************************
[2025-04-21 06:18:15] 2025-04-21 06:17:57,477 | INFO     | 
[2025-04-21 06:18:15] 2025-04-21 06:17:57,506 | INFO     | architecture information:
[2025-04-21 06:18:15] 2025-04-21 06:17:57,506 | INFO     | executing command: cat /etc/os-release
[2025-04-21 06:18:15] 2025-04-21 06:17:57,523 | INFO     | cat /etc/os-release:
[2025-04-21 06:18:15] NAME="CentOS Linux"
[2025-04-21 06:18:15] VERSION="7 (Core)"
[2025-04-21 06:18:15] ID="centos"
[2025-04-21 06:18:15] ID_LIKE="rhel fedora"
[2025-04-21 06:18:15] VERSION_ID="7"
[2025-04-21 06:18:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-21 06:18:15] ANSI_COLOR="0;31"
[2025-04-21 06:18:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-21 06:18:15] HOME_URL="https://www.centos.org/"
[2025-04-21 06:18:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-21 06:18:15] 
[2025-04-21 06:18:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-21 06:18:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-21 06:18:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-21 06:18:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-21 06:18:15] 
[2025-04-21 06:18:15] 2025-04-21 06:17:57,524 | INFO     | **************************************
[2025-04-21 06:18:15] 2025-04-21 06:17:58,027 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31418/slots/2
[2025-04-21 06:18:15] 2025-04-21 06:17:58,044 | INFO     | sufficient remaining disk space (332829556736 B)
[2025-04-21 06:18:15] 2025-04-21 06:17:58,044 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-21 06:18:15] 2025-04-21 06:17:58,044 | INFO     | current server update state: UPDATING_FINAL
[2025-04-21 06:18:15] 2025-04-21 06:17:58,045 | INFO     | update_server=False
[2025-04-21 06:18:15] 2025-04-21 06:17:58,045 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-21 06:18:15] 2025-04-21 06:17:58,045 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-21 06:18:15] 2025-04-21 06:17:58,045 | INFO     | aborting loop
[2025-04-21 06:18:15] 2025-04-21 06:17:58,045 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-21 06:18:15] 2025-04-21 06:17:58,046 | INFO     | found 0 job(s) in 20 queues
[2025-04-21 06:18:15] 2025-04-21 06:17:58,046 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-21 06:18:15] 2025-04-21 06:17:58,046 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-21 06:18:15] 2025-04-21 06:17:58,503 | INFO     | all job control threads have been joined
[2025-04-21 06:18:15] 2025-04-21 06:17:58,555 | INFO     | all data control threads have been joined
[2025-04-21 06:18:15] 2025-04-21 06:17:59,050 | INFO     | [job] retrieve thread has finished
[2025-04-21 06:18:15] 2025-04-21 06:17:59,050 | INFO     | [job] job monitor thread has finished
[2025-04-21 06:18:15] 2025-04-21 06:17:59,447 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-21 06:18:15] 2025-04-21 06:17:59,507 | INFO     | all payload control threads have been joined
[2025-04-21 06:18:15] 2025-04-21 06:17:59,509 | INFO     | [job] control thread has finished
[2025-04-21 06:18:15] 2025-04-21 06:17:59,560 | INFO     | [data] control thread has finished
[2025-04-21 06:18:15] 2025-04-21 06:17:59,825 | INFO     | [data] copytool_in thread has finished
[2025-04-21 06:18:15] 2025-04-21 06:17:59,825 | INFO     | [payload] validate_post thread has finished
[2025-04-21 06:18:15] 2025-04-21 06:18:00,182 | INFO     | [job] validate thread has finished
[2025-04-21 06:18:15] 2025-04-21 06:18:00,262 | INFO     | [payload] execute_payloads thread has finished
[2025-04-21 06:18:15] 2025-04-21 06:18:00,373 | INFO     | [job] create_data_payload thread has finished
[2025-04-21 06:18:15] 2025-04-21 06:18:00,512 | INFO     | [payload] control thread has finished
[2025-04-21 06:18:15] 2025-04-21 06:18:00,549 | INFO     | [payload] validate_pre thread has finished
[2025-04-21 06:18:15] 2025-04-21 06:18:00,626 | INFO     | [payload] failed_post thread has finished
[2025-04-21 06:18:15] 2025-04-21 06:18:00,929 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-21 06:18:15] 2025-04-21 06:18:01,360 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-21 06:18:15] 2025-04-21 06:18:01,453 | INFO     | [data] copytool_out thread has finished
[2025-04-21 06:18:15] 2025-04-21 06:18:01,935 | INFO     | [job] queue monitor thread has finished
[2025-04-21 06:18:15] 2025-04-21 06:18:05,366 | INFO     | [data] queue_monitor thread has finished
[2025-04-21 06:18:15] 2025-04-21 06:18:08,723 | INFO     | job.realtimelogging is not enabled
[2025-04-21 06:18:15] 2025-04-21 06:18:09,728 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-21 06:18:15] 2025-04-21 06:18:10,137 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140406171096896)>', '<ExcThread(monitor, started 140405291083520)>']
[2025-04-21 06:18:15] 2025-04-21 06:18:11,111 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-21 06:18:15] 2025-04-21 06:18:11,111 | INFO     | [monitor] control thread has ended
[2025-04-21 06:18:15] 2025-04-21 06:18:15,162 | INFO     | all workflow threads have been joined
[2025-04-21 06:18:15] 2025-04-21 06:18:15,162 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-21 06:18:15] 2025-04-21 06:18:15,163 | INFO     | traces error code: 0
[2025-04-21 06:18:15] 2025-04-21 06:18:15,163 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-21 06:18:15] 2025-04-21 06:18:15,250 [wrapper] ==== pilot stdout END ====
[2025-04-21 06:18:15] 2025-04-21 06:18:15,254 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-21 06:18:15] 2025-04-21 06:18:15,258 [wrapper] pilotpid: 2008983
[2025-04-21 06:18:15] 2025-04-21 06:18:15,263 [wrapper] Pilot exit status: 0
[2025-04-21 06:18:15] 2025-04-21 06:18:15,278 [wrapper] pandaids: 6610773275
[2025-04-21 06:18:15] 2025-04-21 06:18:15,340 [wrapper] cleanup supervisor_pilot 2174082 2008985
[2025-04-21 06:18:15] 2025-04-21 06:18:15,344 [wrapper] Test setup, not cleaning
[2025-04-21 06:18:15] 2025-04-21 06:18:15,349 [wrapper] apfmon messages muted
[2025-04-21 06:18:15] 2025-04-21 06:18:15,352 [wrapper] ==== wrapper stdout END ====
[2025-04-21 06:18:15] 2025-04-21 06:18:15,356 [wrapper] ==== wrapper stderr END ====
[2025-04-21 06:18:15]  *** Error codes and diagnostics ***
[2025-04-21 06:18:15]     "exeErrorCode": 0,
[2025-04-21 06:18:15]     "exeErrorDiag": "",
[2025-04-21 06:18:15]     "pilotErrorCode": 0,
[2025-04-21 06:18:15]     "pilotErrorDiag": "",
[2025-04-21 06:18:15]  *** Listing of results directory ***
[2025-04-21 06:18:15] total 416260
[2025-04-21 06:18:15] -rw-r--r-- 1 boinc boinc    495897 Apr 21 05:28 pilot3.tar.gz
[2025-04-21 06:18:15] -rwx------ 1 boinc boinc     37140 Apr 21 05:34 runpilot2-wrapper.sh
[2025-04-21 06:18:15] -rw-r--r-- 1 boinc boinc      5111 Apr 21 05:34 queuedata.json
[2025-04-21 06:18:15] -rw-rw-r-- 1 boinc boinc       100 Apr 21 05:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-21 06:18:15] -rwxr-xr-x 1 boinc boinc      7986 Apr 21 05:35 run_atlas
[2025-04-21 06:18:15] -rw-rw-r-- 1 boinc boinc       105 Apr 21 05:35 job.xml
[2025-04-21 06:18:15] -rw-r--r-- 2 boinc boinc     17569 Apr 21 05:35 start_atlas.sh
[2025-04-21 06:18:15] drwxrwx--x 2 boinc boinc      4096 Apr 21 05:35 shared
[2025-04-21 06:18:15] -rw-r--r-- 2 boinc boinc    508894 Apr 21 05:35 input.tar.gz
[2025-04-21 06:18:15] -rw-rw-r-- 1 boinc boinc      6940 Apr 21 05:35 init_data.xml
[2025-04-21 06:18:15] -rw-r--r-- 2 boinc boinc 221864678 Apr 21 05:35 EVNT.44075481._003642.pool.root.1
[2025-04-21 06:18:15] -rw-rw-r-- 1 boinc boinc         0 Apr 21 05:35 boinc_lockfile
[2025-04-21 06:18:15] -rw-rw-r-- 1 boinc boinc      2577 Apr 21 05:35 pandaJob.out
[2025-04-21 06:18:15] -rw------- 1 boinc boinc       424 Apr 21 05:35 setup.sh.local
[2025-04-21 06:18:15] -rw------- 1 boinc boinc    991292 Apr 21 05:36 agis_schedconf.cvmfs.json
[2025-04-21 06:18:15] -rw------- 1 boinc boinc   1618536 Apr 21 05:36 agis_ddmendpoints.agis.ALL.json
[2025-04-21 06:18:15] drwx------ 4 boinc boinc      4096 Apr 21 05:36 pilot3
[2025-04-21 06:18:15] -rw------- 1 boinc boinc 199299577 Apr 21 06:17 HITS.44075483._099177.pool.root.1
[2025-04-21 06:18:15] -rw-rw-r-- 1 boinc boinc       529 Apr 21 06:17 boinc_task_state.xml
[2025-04-21 06:18:15] -rw------- 1 boinc boinc      1019 Apr 21 06:17 memory_monitor_summary.json
[2025-04-21 06:18:15] -rw------- 1 boinc boinc    328087 Apr 21 06:17 log.44075483._099177.job.log.tgz.1
[2025-04-21 06:18:15] -rw------- 1 boinc boinc        95 Apr 21 06:17 pilot_heartbeat.json
[2025-04-21 06:18:15] -rw------- 1 boinc boinc      7649 Apr 21 06:17 heartbeat.json
[2025-04-21 06:18:15] -rw-rw-r-- 1 boinc boinc      8192 Apr 21 06:18 boinc_mmap_file
[2025-04-21 06:18:15] -rw-rw-r-- 1 boinc boinc        27 Apr 21 06:18 wrapper_checkpoint.txt
[2025-04-21 06:18:15] -rw------- 1 boinc boinc      4572 Apr 21 06:18 pilotlog.txt
[2025-04-21 06:18:15] -rw------- 1 boinc boinc    276269 Apr 21 06:18 log.44075483._099177.job.log.1
[2025-04-21 06:18:15] -rw------- 1 boinc boinc       357 Apr 21 06:18 output.list
[2025-04-21 06:18:15] -rw-rw-r-- 1 boinc boinc       620 Apr 21 06:18 runtime_log
[2025-04-21 06:18:15] -rw------- 1 boinc boinc    624640 Apr 21 06:18 result.tar.gz
[2025-04-21 06:18:15] -rw-rw-r-- 1 boinc boinc     11409 Apr 21 06:18 runtime_log.err
[2025-04-21 06:18:15] -rw------- 1 boinc boinc       652 Apr 21 06:18 XApNDm4yyQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmXGlLDmCYvY0m.diag
[2025-04-21 06:18:15] -rw-rw-r-- 1 boinc boinc     22627 Apr 21 06:18 stderr.txt
[2025-04-21 06:18:15] HITS file was successfully produced:
[2025-04-21 06:18:15] -rw------- 1 boinc boinc 199299577 Apr 21 06:17 shared/HITS.pool.root.1
[2025-04-21 06:18:15]  *** Contents of shared directory: ***
[2025-04-21 06:18:15] total 412440
[2025-04-21 06:18:15] -rw-r--r-- 2 boinc boinc     17569 Apr 21 05:35 start_atlas.sh
[2025-04-21 06:18:15] -rw-r--r-- 2 boinc boinc    508894 Apr 21 05:35 input.tar.gz
[2025-04-21 06:18:15] -rw-r--r-- 2 boinc boinc 221864678 Apr 21 05:35 ATLAS.root_0
[2025-04-21 06:18:15] -rw------- 1 boinc boinc 199299577 Apr 21 06:17 HITS.pool.root.1
[2025-04-21 06:18:15] -rw------- 1 boinc boinc    624640 Apr 21 06:18 result.tar.gz
06:18:17 (2001016): run_atlas exited; CPU time 20725.805097
06:18:17 (2001016): called boinc_finish(0)

</stderr_txt>
]]>

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