Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:35:30 (840): wrapper (7.7.26015): starting
11:35:30 (840): wrapper: running run_atlas (--nthreads 8)
[2025-04-20 11:35:30] Arguments: --nthreads 8
[2025-04-20 11:35:30] Threads: 8
[2025-04-20 11:35:30] Checking for CVMFS
[2025-04-20 11:35:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-20 11:35:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-20 11:35:30] Running cvmfs_config stat atlas.cern.ch
[2025-04-20 11:35:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-20 11:35:31] 2.11.2.0 2851 163478 116260 145080 0 56 13025571 20275200 1 130560 0 21157984 99.987 8485571 46000 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-20 11:35:31] CVMFS is ok
[2025-04-20 11:35:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-20 11:35:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-20 11:35:31] Further information can be found at the LHC@home message board.
[2025-04-20 11:35:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-20 11:35:31] Checking for apptainer binary...
[2025-04-20 11:35:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-20 11:35:31] Running /usr/bin/apptainer --version
[2025-04-20 11:35:31] apptainer version 1.3.2-1.el7
[2025-04-20 11:35:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-20 11:35:32] c-204-34.aglt2.org
[2025-04-20 11:35:32] apptainer works
[2025-04-20 11:35:32] Set ATHENA_PROC_NUMBER=8
[2025-04-20 11:35:32] Set ATHENA_CORE_NUMBER=8
[2025-04-20 11:35:32] Starting ATLAS job with PandaID=6607612196
[2025-04-20 11:35:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
13:13:45 (9907): wrapper (7.7.26015): starting
13:13:45 (9907): wrapper: running run_atlas (--nthreads 8)
[2025-04-20 13:13:45] Arguments: --nthreads 8
[2025-04-20 13:13:45] Threads: 8
[2025-04-20 13:13:45] This job has been restarted, cleaning up previous attempt
[2025-04-20 13:13:45] Checking for CVMFS
[2025-04-20 13:13:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-20 13:13:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-20 13:13:45] Running cvmfs_config stat atlas.cern.ch
[2025-04-20 13:13:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-20 13:13:45] 2.11.2.0 2851 163576 115808 145081 2 38 13035593 20275201 1 130560 0 21228130 99.987 8486769 45997 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-20 13:13:45] CVMFS is ok
[2025-04-20 13:13:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-20 13:13:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-20 13:13:45] Further information can be found at the LHC@home message board.
[2025-04-20 13:13:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-20 13:13:45] Checking for apptainer binary...
[2025-04-20 13:13:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-20 13:13:45] Running /usr/bin/apptainer --version
[2025-04-20 13:13:45] apptainer version 1.3.2-1.el7
[2025-04-20 13:13:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-20 13:13:47] c-204-34.aglt2.org
[2025-04-20 13:13:47] apptainer works
[2025-04-20 13:13:47] Set ATHENA_PROC_NUMBER=8
[2025-04-20 13:13:47] Set ATHENA_CORE_NUMBER=8
[2025-04-20 13:13:47] Starting ATLAS job with PandaID=6607612196
[2025-04-20 13:13:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-20 15:29:57]  *** The last 200 lines of the pilot log: ***
[2025-04-20 15:29:57] 2025-04-20 19:29:44,122 | INFO     | mean y: 2435273.4661654136
[2025-04-20 15:29:57] 2025-04-20 19:29:44,123 | INFO     | -- intersect: -106784958027.2455
[2025-04-20 15:29:57] 2025-04-20 19:29:44,123 | INFO     | intersect: -106784958027.2455
[2025-04-20 15:29:57] 2025-04-20 19:29:44,123 | INFO     | chi2: 3.523830199727072
[2025-04-20 15:29:57] 2025-04-20 19:29:44,124 | INFO     | sum of square deviations: 650252192.0
[2025-04-20 15:29:57] 2025-04-20 19:29:44,124 | INFO     | sum of deviations: 42974397032.0
[2025-04-20 15:29:57] 2025-04-20 19:29:44,125 | INFO     | mean x: 1745173147.5
[2025-04-20 15:29:57] 2025-04-20 19:29:44,125 | INFO     | mean y: 2432072.390625
[2025-04-20 15:29:57] 2025-04-20 19:29:44,125 | INFO     | -- intersect: -115333993783.51807
[2025-04-20 15:29:57] 2025-04-20 19:29:44,125 | INFO     | intersect: -115333993783.51807
[2025-04-20 15:29:57] 2025-04-20 19:29:44,125 | INFO     | chi2: 3.525325986793374
[2025-04-20 15:29:57] 2025-04-20 19:29:44,125 | INFO     | current chi2=3.525325986793374 (change=-0.042447762279181574 %)
[2025-04-20 15:29:57] 2025-04-20 19:29:44,126 | INFO     | right removable region: 127
[2025-04-20 15:29:57] 2025-04-20 19:29:44,126 | INFO     | sum of square deviations: 650252192.0
[2025-04-20 15:29:57] 2025-04-20 19:29:44,126 | INFO     | sum of deviations: 9851596898.5
[2025-04-20 15:29:57] 2025-04-20 19:29:44,127 | INFO     | mean x: 1745173452.5
[2025-04-20 15:29:57] 2025-04-20 19:29:44,127 | INFO     | mean y: 2502034.5859375
[2025-04-20 15:29:57] 2025-04-20 19:29:44,127 | INFO     | -- intersect: -26437617020.0124
[2025-04-20 15:29:57] 2025-04-20 19:29:44,127 | INFO     | intersect: -26437617020.0124
[2025-04-20 15:29:57] 2025-04-20 19:29:44,127 | INFO     | chi2: 0.6969373251468094
[2025-04-20 15:29:57] 2025-04-20 19:29:44,127 | INFO     | current chi2=0.6969373251468094 (change=80.2221649272207 %)
[2025-04-20 15:29:57] 2025-04-20 19:29:44,128 | INFO     | sum of square deviations: 576985702.0
[2025-04-20 15:29:57] 2025-04-20 19:29:44,128 | INFO     | sum of deviations: -5210793056.999999
[2025-04-20 15:29:57] 2025-04-20 19:29:44,128 | INFO     | mean x: 1745173605.0
[2025-04-20 15:29:57] 2025-04-20 19:29:44,128 | INFO     | mean y: 2533036.1544715445
[2025-04-20 15:29:57] 2025-04-20 19:29:44,129 | INFO     | -- intersect: 15763302276.487673
[2025-04-20 15:29:57] 2025-04-20 19:29:44,129 | INFO     | intersect: 15763302276.487673
[2025-04-20 15:29:57] 2025-04-20 19:29:44,129 | INFO     | chi2: 0.05757563655194566
[2025-04-20 15:29:57] 2025-04-20 19:29:44,129 | INFO     | current chi2=0.05757563655194566 (change=91.73876409333977 %)
[2025-04-20 15:29:57] 2025-04-20 19:29:44,129 | INFO     | sum of square deviations: 509440249.5
[2025-04-20 15:29:57] 2025-04-20 19:29:44,130 | INFO     | sum of deviations: -7753113816.5
[2025-04-20 15:29:57] 2025-04-20 19:29:44,130 | INFO     | mean x: 1745173757.5
[2025-04-20 15:29:57] 2025-04-20 19:29:44,130 | INFO     | mean y: 2538648.2627118644
[2025-04-20 15:29:57] 2025-04-20 19:29:44,130 | INFO     | -- intersect: 26562141633.590767
[2025-04-20 15:29:57] 2025-04-20 19:29:44,130 | INFO     | intersect: 26562141633.590767
[2025-04-20 15:29:57] 2025-04-20 19:29:44,131 | INFO     | chi2: 0.016952432618744368
[2025-04-20 15:29:57] 2025-04-20 19:29:44,131 | INFO     | current chi2=0.016952432618744368 (change=70.55623935056347 %)
[2025-04-20 15:29:57] 2025-04-20 19:29:44,131 | INFO     | sum of square deviations: 447383272.0
[2025-04-20 15:29:57] 2025-04-20 19:29:44,131 | INFO     | sum of deviations: -7103808923.999999
[2025-04-20 15:29:57] 2025-04-20 19:29:44,132 | INFO     | mean x: 1745173910.0
[2025-04-20 15:29:57] 2025-04-20 19:29:44,132 | INFO     | mean y: 2537040.132743363
[2025-04-20 15:29:57] 2025-04-20 19:29:44,132 | INFO     | -- intersect: 27713412192.813847
[2025-04-20 15:29:57] 2025-04-20 19:29:44,132 | INFO     | intersect: 27713412192.813847
[2025-04-20 15:29:57] 2025-04-20 19:29:44,132 | INFO     | chi2: 0.016609644194833035
[2025-04-20 15:29:57] 2025-04-20 19:29:44,132 | INFO     | current chi2=0.016609644194833035 (change=2.0220603828403414 %)
[2025-04-20 15:29:57] 2025-04-20 19:29:44,132 | INFO     | left removable region: 40
[2025-04-20 15:29:57] 2025-04-20 19:29:44,133 | INFO     | sum of square deviations: 204163828.0
[2025-04-20 15:29:57] 2025-04-20 19:29:44,133 | INFO     | sum of deviations: -2525673097.0000005
[2025-04-20 15:29:57] 2025-04-20 19:29:44,133 | INFO     | mean x: 1745174337.0
[2025-04-20 15:29:57] 2025-04-20 19:29:44,133 | INFO     | mean y: 2523384.620689655
[2025-04-20 15:29:57] 2025-04-20 19:29:44,133 | INFO     | -- intersect: 21591753542.157276
[2025-04-20 15:29:57] 2025-04-20 19:29:44,134 | INFO     | intersect: 21591753542.157276
[2025-04-20 15:29:57] 2025-04-20 19:29:44,134 | INFO     | chi2: 0.013163279038505454
[2025-04-20 15:29:57] 2025-04-20 19:29:44,134 | INFO     | -- intersect: 21591753542.157276
[2025-04-20 15:29:57] 2025-04-20 19:29:44,134 | INFO     | current memory leak: -12.37 B/s (using 87 data points, chi2=0.01)
[2025-04-20 15:29:57] 2025-04-20 19:29:44,135 | INFO     | ..............................
[2025-04-20 15:29:57] 2025-04-20 19:29:44,135 | INFO     | . Timing measurements:
[2025-04-20 15:29:57] 2025-04-20 19:29:44,135 | INFO     | . get job = 0 s
[2025-04-20 15:29:57] 2025-04-20 19:29:44,135 | INFO     | . initial setup = 1 s
[2025-04-20 15:29:57] 2025-04-20 19:29:44,135 | INFO     | . payload setup = 9 s
[2025-04-20 15:29:57] 2025-04-20 19:29:44,135 | INFO     | . stage-in = 0 s
[2025-04-20 15:29:57] 2025-04-20 19:29:44,135 | INFO     | . payload execution = 8097 s
[2025-04-20 15:29:57] 2025-04-20 19:29:44,135 | INFO     | . stage-out = 2 s
[2025-04-20 15:29:57] 2025-04-20 19:29:44,135 | INFO     | . log creation = 0 s
[2025-04-20 15:29:57] 2025-04-20 19:29:44,136 | INFO     | ..............................
[2025-04-20 15:29:57] 2025-04-20 19:29:44,230 | INFO     | 
[2025-04-20 15:29:57] 2025-04-20 19:29:44,231 | INFO     | job summary report
[2025-04-20 15:29:57] 2025-04-20 19:29:44,231 | INFO     | --------------------------------------------------
[2025-04-20 15:29:57] 2025-04-20 19:29:44,231 | INFO     | PanDA job id: 6607612196
[2025-04-20 15:29:57] 2025-04-20 19:29:44,231 | INFO     | task id: 44075483
[2025-04-20 15:29:57] 2025-04-20 19:29:44,231 | INFO     | errors: (none)
[2025-04-20 15:29:57] 2025-04-20 19:29:44,231 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-20 15:29:57] 2025-04-20 19:29:44,232 | INFO     | pilot state: finished 
[2025-04-20 15:29:57] 2025-04-20 19:29:44,232 | INFO     | transexitcode: 0
[2025-04-20 15:29:57] 2025-04-20 19:29:44,232 | INFO     | exeerrorcode: 0
[2025-04-20 15:29:57] 2025-04-20 19:29:44,232 | INFO     | exeerrordiag: 
[2025-04-20 15:29:57] 2025-04-20 19:29:44,232 | INFO     | exitcode: 0
[2025-04-20 15:29:57] 2025-04-20 19:29:44,232 | INFO     | exitmsg: OK
[2025-04-20 15:29:57] 2025-04-20 19:29:44,232 | INFO     | cpuconsumptiontime: 56568 s
[2025-04-20 15:29:57] 2025-04-20 19:29:44,232 | INFO     | nevents: 400
[2025-04-20 15:29:57] 2025-04-20 19:29:44,232 | INFO     | neventsw: 0
[2025-04-20 15:29:57] 2025-04-20 19:29:44,233 | INFO     | pid: 21070
[2025-04-20 15:29:57] 2025-04-20 19:29:44,233 | INFO     | pgrp: 21070
[2025-04-20 15:29:57] 2025-04-20 19:29:44,233 | INFO     | corecount: 8
[2025-04-20 15:29:57] 2025-04-20 19:29:44,233 | INFO     | event service: False
[2025-04-20 15:29:57] 2025-04-20 19:29:44,233 | INFO     | sizes: {0: 2426824, 6: 2427030, 11: 2427058, 8109: 2454629, 8113: 2463570, 8116: 2463626, 8125: 2463924}
[2025-04-20 15:29:57] 2025-04-20 19:29:44,233 | INFO     | --------------------------------------------------
[2025-04-20 15:29:57] 2025-04-20 19:29:44,233 | INFO     | 
[2025-04-20 15:29:57] 2025-04-20 19:29:44,233 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-20 15:29:57] 2025-04-20 19:29:44,263 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-20 15:29:57] 2025-04-20 19:29:44,263 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-20 15:29:57] 2025-04-20 19:29:44,264 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-20 15:29:57] 2025-04-20 19:29:44,264 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-20 15:29:57] 2025-04-20 19:29:44,264 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-20 15:29:57] 2025-04-20 19:29:44,264 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-20 15:29:57] 2025-04-20 19:29:44,264 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-20 15:29:57] 2025-04-20 19:29:44,265 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-20 15:29:57] 2025-04-20 19:29:44,265 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-20 15:29:57] 2025-04-20 19:29:44,265 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-20 15:29:57] 2025-04-20 19:29:44,265 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-20 15:29:57] 2025-04-20 19:29:44,265 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-20 15:29:57] 2025-04-20 19:29:44,266 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-20 15:29:57] 2025-04-20 19:29:44,266 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-20 15:29:57] 2025-04-20 19:29:44,266 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-20 15:29:57] 2025-04-20 19:29:44,266 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-20 15:29:57] 2025-04-20 19:29:44,266 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-20 15:29:57] 2025-04-20 19:29:44,266 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-20 15:29:57] 2025-04-20 19:29:44,267 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-20 15:29:57] 2025-04-20 19:29:44,267 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-20 15:29:57] 2025-04-20 19:29:44,267 | INFO     | job 6607612196 has completed (purged errors)
[2025-04-20 15:29:57] 2025-04-20 19:29:44,267 | INFO     | overall cleanup function is called
[2025-04-20 15:29:57] 2025-04-20 19:29:45,276 | INFO     | --- collectZombieJob: --- 10, [21070]
[2025-04-20 15:29:57] 2025-04-20 19:29:45,276 | INFO     | zombie collector waiting for pid 21070
[2025-04-20 15:29:57] 2025-04-20 19:29:45,276 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-20 15:29:57] 2025-04-20 19:29:45,277 | INFO     | collected zombie processes
[2025-04-20 15:29:57] 2025-04-20 19:29:45,277 | INFO     | will attempt to kill all subprocesses of pid=21070
[2025-04-20 15:29:57] 2025-04-20 19:29:45,367 | INFO     | process IDs to be killed: [21070] (in reverse order)
[2025-04-20 15:29:57] 2025-04-20 19:29:45,426 | WARNING  | found no corresponding commands to process id(s)
[2025-04-20 15:29:57] 2025-04-20 19:29:45,427 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-20 15:29:57] 2025-04-20 19:29:45,433 | INFO     | did not find any defunct processes belonging to 21070
[2025-04-20 15:29:57] 2025-04-20 19:29:45,437 | INFO     | did not find any defunct processes belonging to 21070
[2025-04-20 15:29:57] 2025-04-20 19:29:45,437 | INFO     | ready for new job
[2025-04-20 15:29:57] 2025-04-20 19:29:45,437 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-20 15:29:57] 2025-04-20 19:29:45,439 | INFO     | **************************************
[2025-04-20 15:29:57] 2025-04-20 19:29:45,439 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-20 15:29:57] 2025-04-20 19:29:45,439 | INFO     | **************************************
[2025-04-20 15:29:57] 2025-04-20 19:29:45,439 | INFO     | 
[2025-04-20 15:29:57] 2025-04-20 19:29:45,440 | INFO     | architecture information:
[2025-04-20 15:29:57] 2025-04-20 19:29:45,440 | INFO     | executing command: cat /etc/os-release
[2025-04-20 15:29:57] 2025-04-20 19:29:45,458 | INFO     | cat /etc/os-release:
[2025-04-20 15:29:57] NAME="CentOS Linux"
[2025-04-20 15:29:57] VERSION="7 (Core)"
[2025-04-20 15:29:57] ID="centos"
[2025-04-20 15:29:57] ID_LIKE="rhel fedora"
[2025-04-20 15:29:57] VERSION_ID="7"
[2025-04-20 15:29:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-20 15:29:57] ANSI_COLOR="0;31"
[2025-04-20 15:29:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-20 15:29:57] HOME_URL="https://www.centos.org/"
[2025-04-20 15:29:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-20 15:29:57] 
[2025-04-20 15:29:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-20 15:29:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-20 15:29:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-20 15:29:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-20 15:29:57] 
[2025-04-20 15:29:57] 2025-04-20 19:29:45,459 | INFO     | **************************************
[2025-04-20 15:29:57] 2025-04-20 19:29:45,962 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-20 15:29:57] 2025-04-20 19:29:45,981 | INFO     | sufficient remaining disk space (18580766720 B)
[2025-04-20 15:29:57] 2025-04-20 19:29:45,982 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-20 15:29:57] 2025-04-20 19:29:45,982 | INFO     | current server update state: UPDATING_FINAL
[2025-04-20 15:29:57] 2025-04-20 19:29:45,982 | INFO     | update_server=False
[2025-04-20 15:29:57] 2025-04-20 19:29:45,983 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-20 15:29:57] 2025-04-20 19:29:45,983 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-20 15:29:57] 2025-04-20 19:29:45,983 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-20 15:29:57] 2025-04-20 19:29:45,984 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-20 15:29:57] 2025-04-20 19:29:45,985 | INFO     | found 0 job(s) in 20 queues
[2025-04-20 15:29:57] 2025-04-20 19:29:45,985 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-20 15:29:57] 2025-04-20 19:29:45,985 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-20 15:29:57] 2025-04-20 19:29:46,290 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-20 15:29:57] 2025-04-20 19:29:46,290 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-20 15:29:57] 2025-04-20 19:29:46,290 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-20 15:29:57] 2025-04-20 19:29:46,291 | INFO     | will abort loop
[2025-04-20 15:29:57] 2025-04-20 19:29:46,338 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-20 15:29:57] 2025-04-20 19:29:46,374 | INFO     | all payload control threads have been joined
[2025-04-20 15:29:57] 2025-04-20 19:29:46,394 | INFO     | all data control threads have been joined
[2025-04-20 15:29:57] 2025-04-20 19:29:46,988 | INFO     | [job] retrieve thread has finished
[2025-04-20 15:29:57] 2025-04-20 19:29:46,989 | INFO     | [job] queue monitor thread has finished
[2025-04-20 15:29:57] 2025-04-20 19:29:47,295 | INFO     | [job] job monitor thread has finished
[2025-04-20 15:29:57] 2025-04-20 19:29:47,378 | INFO     | [payload] control thread has finished
[2025-04-20 15:29:57] 2025-04-20 19:29:47,395 | INFO     | [data] control thread has finished
[2025-04-20 15:29:57] 2025-04-20 19:29:47,409 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-20 15:29:57] 2025-04-20 19:29:47,547 | INFO     | all job control threads have been joined
[2025-04-20 15:29:57] 2025-04-20 19:29:47,591 | INFO     | [payload] validate_post thread has finished
[2025-04-20 15:29:57] 2025-04-20 19:29:47,651 | INFO     | [job] validate thread has finished
[2025-04-20 15:29:57] 2025-04-20 19:29:47,684 | INFO     | [job] create_data_payload thread has finished
[2025-04-20 15:29:57] 2025-04-20 19:29:47,711 | INFO     | [payload] failed_post thread has finished
[2025-04-20 15:29:57] 2025-04-20 19:29:47,919 | INFO     | [payload] execute_payloads thread has finished
[2025-04-20 15:29:57] 2025-04-20 19:29:47,990 | INFO     | [data] copytool_out thread has finished
[2025-04-20 15:29:57] 2025-04-20 19:29:48,188 | INFO     | [payload] validate_pre thread has finished
[2025-04-20 15:29:57] 2025-04-20 19:29:48,188 | INFO     | [data] copytool_in thread has finished
[2025-04-20 15:29:57] 2025-04-20 19:29:48,552 | INFO     | [job] control thread has finished
[2025-04-20 15:29:57] 2025-04-20 19:29:50,339 | INFO     | [data] queue_monitor thread has finished
[2025-04-20 15:29:57] 2025-04-20 19:29:51,925 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139690763224896)>', '<ExcThread(monitor, started 139690103527168)>']
[2025-04-20 15:29:57] 2025-04-20 19:29:52,000 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-20 15:29:57] 2025-04-20 19:29:52,000 | INFO     | [monitor] control thread has ended
[2025-04-20 15:29:57] 2025-04-20 19:29:56,932 | INFO     | all workflow threads have been joined
[2025-04-20 15:29:57] 2025-04-20 19:29:56,932 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-20 15:29:57] 2025-04-20 19:29:56,932 | INFO     | traces error code: 0
[2025-04-20 15:29:57] 2025-04-20 19:29:56,935 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-20 15:29:57] 2025-04-20 19:29:57,049 [wrapper] ==== pilot stdout END ====
[2025-04-20 15:29:57] 2025-04-20 19:29:57,053 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-20 15:29:57] 2025-04-20 19:29:57,058 [wrapper] pilotpid: 13676
[2025-04-20 15:29:57] 2025-04-20 19:29:57,062 [wrapper] Pilot exit status: 0
[2025-04-20 15:29:57] 2025-04-20 19:29:57,080 [wrapper] pandaids: 6607612196 6607612196
[2025-04-20 15:29:57] 2025-04-20 19:29:57,130 [wrapper] cleanup supervisor_pilot 25217 13677
[2025-04-20 15:29:57] 2025-04-20 19:29:57,135 [wrapper] Test setup, not cleaning
[2025-04-20 15:29:57] 2025-04-20 19:29:57,140 [wrapper] apfmon messages muted
[2025-04-20 15:29:57] 2025-04-20 19:29:57,145 [wrapper] ==== wrapper stdout END ====
[2025-04-20 15:29:57] 2025-04-20 19:29:57,151 [wrapper] ==== wrapper stderr END ====
[2025-04-20 15:29:57]  *** Error codes and diagnostics ***
[2025-04-20 15:29:57]     "exeErrorCode": 0,
[2025-04-20 15:29:57]     "exeErrorDiag": "",
[2025-04-20 15:29:57]     "pilotErrorCode": 0,
[2025-04-20 15:29:57]     "pilotErrorDiag": "",
[2025-04-20 15:29:57]  *** Listing of results directory ***
[2025-04-20 15:29:57] total 640432
[2025-04-20 15:29:57] drwx------ 4 boincer umatlas      4096 Apr  3 04:00 pilot3
[2025-04-20 15:29:57] -rw-r--r-- 1 boincer umatlas    495897 Apr 19 05:50 pilot3.tar.gz
[2025-04-20 15:29:57] -rw-r--r-- 1 boincer umatlas      5111 Apr 19 06:00 queuedata.json
[2025-04-20 15:29:57] -rwx------ 1 boincer umatlas     37140 Apr 19 06:01 runpilot2-wrapper.sh
[2025-04-20 15:29:57] -rw-r--r-- 1 boincer umatlas       100 Apr 20 11:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-20 15:29:57] -rwxr-xr-x 1 boincer umatlas      7986 Apr 20 11:35 run_atlas
[2025-04-20 15:29:57] -rw-r--r-- 1 boincer umatlas       105 Apr 20 11:35 job.xml
[2025-04-20 15:29:57] -rw-r--r-- 3 boincer umatlas 225796265 Apr 20 11:35 EVNT.44075481._003151.pool.root.1
[2025-04-20 15:29:57] -rw-r--r-- 3 boincer umatlas 225796265 Apr 20 11:35 ATLAS.root_0
[2025-04-20 15:29:57] -rw-r--r-- 2 boincer umatlas     17569 Apr 20 11:35 start_atlas.sh
[2025-04-20 15:29:57] drwxrwx--x 2 boincer umatlas      4096 Apr 20 11:35 shared
[2025-04-20 15:29:57] -rw-r--r-- 2 boincer umatlas    508889 Apr 20 11:35 input.tar.gz
[2025-04-20 15:29:57] -rw-r--r-- 1 boincer umatlas         0 Apr 20 11:35 boinc_lockfile
[2025-04-20 15:29:57] -rw-r--r-- 1 boincer umatlas      2579 Apr 20 13:13 pandaJob.out
[2025-04-20 15:29:57] -rw------- 1 boincer umatlas       462 Apr 20 13:13 setup.sh.local
[2025-04-20 15:29:57] -rw------- 1 boincer umatlas    991292 Apr 20 13:14 agis_schedconf.cvmfs.json
[2025-04-20 15:29:57] -rw-r--r-- 1 boincer umatlas      5905 Apr 20 15:28 init_data.xml
[2025-04-20 15:29:57] -rw------- 1 boincer umatlas        96 Apr 20 15:28 pilot_heartbeat.json
[2025-04-20 15:29:57] -rw------- 1 boincer umatlas 198166614 Apr 20 15:28 HITS.44075483._081241.pool.root.1
[2025-04-20 15:29:57] -rw-r--r-- 1 boincer umatlas       530 Apr 20 15:29 boinc_task_state.xml
[2025-04-20 15:29:57] -rw------- 1 boincer umatlas      1049 Apr 20 15:29 memory_monitor_summary.json
[2025-04-20 15:29:57] -rw------- 1 boincer umatlas   1618536 Apr 20 15:29 agis_ddmendpoints.agis.ALL.json
[2025-04-20 15:29:57] -rw------- 1 boincer umatlas    341617 Apr 20 15:29 log.44075483._081241.job.log.tgz.1
[2025-04-20 15:29:57] -rw-r--r-- 1 boincer umatlas      8192 Apr 20 15:29 boinc_mmap_file
[2025-04-20 15:29:57] -rw-r--r-- 1 boincer umatlas        28 Apr 20 15:29 wrapper_checkpoint.txt
[2025-04-20 15:29:57] -rw------- 1 boincer umatlas      7746 Apr 20 15:29 heartbeat.json
[2025-04-20 15:29:57] -rw------- 1 boincer umatlas      4662 Apr 20 15:29 pilotlog.txt
[2025-04-20 15:29:57] -rw------- 1 boincer umatlas    743539 Apr 20 15:29 log.44075483._081241.job.log.1
[2025-04-20 15:29:57] -rw------- 1 boincer umatlas       357 Apr 20 15:29 output.list
[2025-04-20 15:29:57] -rw-r--r-- 1 boincer umatlas       620 Apr 20 15:29 runtime_log
[2025-04-20 15:29:57] -rw------- 1 boincer umatlas   1105920 Apr 20 15:29 result.tar.gz
[2025-04-20 15:29:57] -rw-r--r-- 1 boincer umatlas     11473 Apr 20 15:29 runtime_log.err
[2025-04-20 15:29:57] -rw------- 1 boincer umatlas       785 Apr 20 15:29 0vAMDmFCKQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmvdhLDmWlnNSo.diag
[2025-04-20 15:29:57] -rw-r--r-- 1 boincer umatlas     22913 Apr 20 15:29 stderr.txt
[2025-04-20 15:29:57] HITS file was successfully produced:
[2025-04-20 15:29:57] -rw------- 1 boincer umatlas 198166614 Apr 20 15:28 shared/HITS.pool.root.1
[2025-04-20 15:29:57]  *** Contents of shared directory: ***
[2025-04-20 15:29:57] total 415636
[2025-04-20 15:29:57] -rw-r--r-- 3 boincer umatlas 225796265 Apr 20 11:35 ATLAS.root_0
[2025-04-20 15:29:57] -rw-r--r-- 2 boincer umatlas     17569 Apr 20 11:35 start_atlas.sh
[2025-04-20 15:29:57] -rw-r--r-- 2 boincer umatlas    508889 Apr 20 11:35 input.tar.gz
[2025-04-20 15:29:57] -rw------- 1 boincer umatlas 198166614 Apr 20 15:28 HITS.pool.root.1
[2025-04-20 15:29:57] -rw------- 1 boincer umatlas   1105920 Apr 20 15:29 result.tar.gz
15:29:59 (9907): run_atlas exited; CPU time 56503.995087
15:29:59 (9907): called boinc_finish(0)

</stderr_txt>
]]>

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