Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-20 15:26:09 (25288): Detected: vboxwrapper 26206
2025-04-20 15:26:09 (25288): Detected: BOINC client v8.0.2
2025-04-20 15:26:10 (25288): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-04-20 15:26:10 (25288): Successfully copied 'init_data.xml' to the shared directory.
2025-04-20 15:26:11 (25288): Create VM. (boinc_649ac13659d5773d, slot#0)
2025-04-20 15:26:12 (25288): Setting Memory Size for VM. (4200MB)
2025-04-20 15:26:12 (25288): Setting CPU Count for VM. (2)
2025-04-20 15:26:12 (25288): Setting Chipset Options for VM.
2025-04-20 15:26:13 (25288): Setting Graphics Controller Options for VM.
2025-04-20 15:26:13 (25288): Setting Boot Options for VM.
2025-04-20 15:26:13 (25288): Setting Network Configuration for NAT.
2025-04-20 15:26:14 (25288): Enabling VM Network Access.
2025-04-20 15:26:14 (25288): Disabling USB Support for VM.
2025-04-20 15:26:14 (25288): Disabling COM Port Support for VM.
2025-04-20 15:26:14 (25288): Disabling LPT Port Support for VM.
2025-04-20 15:26:15 (25288): Disabling Audio Support for VM.
2025-04-20 15:26:15 (25288): Disabling Clipboard Support for VM.
2025-04-20 15:26:15 (25288): Disabling Drag and Drop Support for VM.
2025-04-20 15:26:16 (25288): Adding storage controller(s) to VM.
2025-04-20 15:26:16 (25288): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-20 15:26:19 (25288): Adding VirtualBox Guest Additions to VM.
2025-04-20 15:26:19 (25288): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-20 15:26:20 (25288): forwarding host port 56236 to guest port 80
2025-04-20 15:26:20 (25288): Enabling remote desktop for VM.
2025-04-20 15:26:20 (25288): Required extension pack not installed, remote desktop not enabled.
2025-04-20 15:26:20 (25288): Enabling shared directory for VM.
2025-04-20 15:26:21 (25288): Starting VM using VBoxManage interface. (boinc_649ac13659d5773d, slot#0)
2025-04-20 15:26:29 (25288): Successfully started VM. (PID = '27892')
2025-04-20 15:26:29 (25288): Reporting VM Process ID to BOINC.
2025-04-20 15:26:29 (25288): Guest Log: BIOS: VirtualBox 7.0.6
2025-04-20 15:26:29 (25288): Guest Log: CPUID EDX: 0x178bfbff
2025-04-20 15:26:29 (25288): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-20 15:26:29 (25288): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-20 15:26:29 (25288): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-20 15:26:29 (25288): Detected: Web Application Enabled (http://localhost:56236)
2025-04-20 15:26:29 (25288): Preference change detected
2025-04-20 15:26:29 (25288): Setting CPU throttle for VM. (85%)
2025-04-20 15:26:30 (25288): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-20 15:26:31 (25288): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-20 15:26:31 (25288): Guest Log: BIOS: Booting from Hard Disk...
2025-04-20 15:26:35 (25288): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-20 15:26:35 (25288): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-20 15:26:35 (25288): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-20 15:26:35 (25288): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-20 15:26:35 (25288): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-20 15:26:35 (25288): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-20 15:26:35 (25288): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-20 15:26:35 (25288): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-20 15:26:35 (25288): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-20 15:26:35 (25288): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-20 15:26:35 (25288): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-20 15:26:35 (25288): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-20 15:26:35 (25288): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-20 15:26:35 (25288): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-20 15:26:35 (25288): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-20 15:26:35 (25288): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-20 15:26:35 (25288): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-20 15:26:35 (25288): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-20 15:26:35 (25288): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-20 15:26:35 (25288): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-20 15:26:35 (25288): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-20 15:26:35 (25288): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-20 15:26:35 (25288): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-20 15:26:35 (25288): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-20 15:26:35 (25288): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-20 15:26:35 (25288): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-20 15:26:35 (25288): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-20 15:26:35 (25288): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-20 15:26:35 (25288): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-20 15:26:35 (25288): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-20 15:26:35 (25288): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-20 15:26:35 (25288): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-20 15:26:47 (25288): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-20 15:26:47 (25288): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-20 15:27:03 (25288): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-20 15:27:03 (25288): Guest Log: 00:00:00.000187 main     Log opened 2025-04-20T15:27:01.623326000Z
2025-04-20 15:27:03 (25288): Guest Log: 00:00:00.000308 main     OS Product: Linux
2025-04-20 15:27:03 (25288): Guest Log: 00:00:00.000336 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-20 15:27:03 (25288): Guest Log: 00:00:00.000383 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-20 15:27:03 (25288): Guest Log: 00:00:00.000417 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-20 15:27:03 (25288): Guest Log: 00:00:00.000417 main     Process ID: 1271
2025-04-20 15:27:03 (25288): Guest Log: 00:00:00.000418 main     Package type: LINUX_64BITS_GENERIC
2025-04-20 15:27:03 (25288): Guest Log: 00:00:00.001654 main     5.2.32 r132073 started. Verbose level = 0
2025-04-20 15:27:04 (25288): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-20 15:27:04 (25288): Guest Log: [INFO] Mounting shared directory
2025-04-20 15:27:04 (25288): Guest Log: [INFO] Checking for init_data.xml
2025-04-20 15:27:08 (25288): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-20 15:27:08 (25288): Guest Log: [INFO] Detected branch: prod
2025-04-20 15:27:08 (25288): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-20 15:27:08 (25288): Guest Log: Copying input files
2025-04-20 15:27:11 (25288): Guest Log: Copied input files into RunAtlas.
2025-04-20 15:27:11 (25288): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-20 15:27:11 (25288): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-20 15:27:11 (25288): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-20 15:27:11 (25288): Guest Log: Further information can be found at the LHC@home message board.
2025-04-20 15:27:13 (25288): Guest Log: 00:00:10.015455 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 347 603 000ns (GuestNow=1 745 177 232 980 014 000 ns GuestLast=1 745 162 821 632 411 000 ns fSetTimeLastLoop=true )
2025-04-20 15:27:20 (25288): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-20 15:27:21 (25288): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-20 15:27:21 (25288): Guest Log: 2.6.3.0 1567 0 30088 145085 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-20 15:27:27 (25288): Guest Log: copied the webapp to /var/www
2025-04-20 15:27:27 (25288): Guest Log: ATHENA_PROC_NUMBER=2
2025-04-20 15:27:27 (25288): Guest Log: ATHENA_CORE_NUMBER=2
2025-04-20 15:27:27 (25288): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-20 15:27:27 (25288): Guest Log:  *** Starting ATLAS job. (PandaID=6607713289 taskID=44075483) ***
2025-04-20 17:06:35 (25288): Status Report: Elapsed Time: '6000.000000'
2025-04-20 17:06:35 (25288): Status Report: CPU Time: '9176.578125'
2025-04-20 18:46:43 (25288): Status Report: Elapsed Time: '12000.000000'
2025-04-20 18:46:43 (25288): Status Report: CPU Time: '19979.015625'
2025-04-20 20:26:55 (25288): Status Report: Elapsed Time: '18000.000000'
2025-04-20 20:26:55 (25288): Status Report: CPU Time: '30659.078125'
2025-04-20 22:07:04 (25288): Status Report: Elapsed Time: '24000.000000'
2025-04-20 22:07:04 (25288): Status Report: CPU Time: '41387.562500'
2025-04-20 23:47:10 (25288): Status Report: Elapsed Time: '30000.000000'
2025-04-20 23:47:10 (25288): Status Report: CPU Time: '52198.656250'
2025-04-21 00:07:47 (25288): Guest Log:  *** Job finished ***
2025-04-21 00:07:47 (25288): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-21 00:07:47 (25288): Guest Log: 2025-04-21 04:07:37,417 | INFO     | [payload] failed_post thread has finished
2025-04-21 00:07:47 (25288): Guest Log: 2025-04-21 04:07:38,752 | INFO     | [data] copytool_out thread has finished
2025-04-21 00:07:47 (25288): Guest Log: 2025-04-21 04:07:40,278 | INFO     | [data] queue_monitor thread has finished
2025-04-21 00:07:47 (25288): Guest Log: 2025-04-21 04:07:40,971 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139698166269760)>', '<ExcThread(monitor, started 139697435178752)>']
2025-04-21 00:07:47 (25288): Guest Log: 2025-04-21 04:07:41,236 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-21 00:07:47 (25288): Guest Log: 2025-04-21 04:07:41,236 | INFO     | [monitor] control thread has ended
2025-04-21 00:07:47 (25288): Guest Log: 2025-04-21 04:07:45,976 | INFO     | all workflow threads have been joined
2025-04-21 00:07:47 (25288): Guest Log: 2025-04-21 04:07:45,977 | INFO     | end of generic workflow (traces error code: 0)
2025-04-21 00:07:47 (25288): Guest Log: 2025-04-21 04:07:45,977 | INFO     | traces error code: 0
2025-04-21 00:07:47 (25288): Guest Log: 2025-04-21 04:07:45,978 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-21 00:07:47 (25288): Guest Log: 2025-04-21 04:07:46,283 [wrapper] ==== pilot stdout END ====
2025-04-21 00:07:47 (25288): Guest Log: 2025-04-21 04:07:46,293 [wrapper] ==== wrapper stdout RESUME ====
2025-04-21 00:07:47 (25288): Guest Log: 2025-04-21 04:07:46,305 [wrapper] pilotpid: 5872
2025-04-21 00:07:47 (25288): Guest Log: 2025-04-21 04:07:46,318 [wrapper] Pilot exit status: 0
2025-04-21 00:07:47 (25288): Guest Log: 2025-04-21 04:07:46,425 [wrapper] pandaids: 6607713289
2025-04-21 00:07:47 (25288): Guest Log: 2025-04-21 04:07:46,476 [wrapper] cleanup supervisor_pilot 10264 5873
2025-04-21 00:07:47 (25288): Guest Log: 2025-04-21 04:07:46,488 [wrapper] Test setup, not cleaning
2025-04-21 00:07:47 (25288): Guest Log: 2025-04-21 04:07:46,499 [wrapper] apfmon messages muted
2025-04-21 00:07:47 (25288): Guest Log: 2025-04-21 04:07:46,508 [wrapper] ==== wrapper stdout END ====
2025-04-21 00:07:47 (25288): Guest Log: 2025-04-21 04:07:46,517 [wrapper] ==== wrapper stderr END ====
2025-04-21 00:07:47 (25288): Guest Log:  *** Error codes and diagnostics ***
2025-04-21 00:07:47 (25288): Guest Log:     "exeErrorCode": 0,
2025-04-21 00:07:47 (25288): Guest Log:     "exeErrorDiag": "",
2025-04-21 00:07:47 (25288): Guest Log:     "pilotErrorCode": 0,
2025-04-21 00:07:47 (25288): Guest Log:     "pilotErrorDiag": "",
2025-04-21 00:07:47 (25288): Guest Log:  *** Listing of results directory ***
2025-04-21 00:07:48 (25288): Guest Log: total 199596
2025-04-21 00:07:48 (25288): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 19 10:20 pilot3.tar.gz
2025-04-21 00:07:48 (25288): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 19 10:41 queuedata.json
2025-04-21 00:07:48 (25288): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 19 10:43 runpilot2-wrapper.sh
2025-04-21 00:07:48 (25288): Guest Log: -rwxr-xr-x. 1 atlas atlas      9460 Apr 20 19:27 init_data.xml
2025-04-21 00:07:48 (25288): Guest Log: -rwxr-xr-x. 1 atlas atlas    508892 Apr 20 19:27 input.tar.gz
2025-04-21 00:07:48 (25288): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr 20 19:27 start_atlas.sh
2025-04-21 00:07:48 (25288): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 20 19:27 EVNT.44075481._003164.pool.root.1 -> /data/./ATLAS.root_0
2025-04-21 00:07:48 (25288): Guest Log: -rw-r--r--. 1 atlas atlas      2578 Apr 20 19:27 pandaJob.out
2025-04-21 00:07:48 (25288): Guest Log: -rw-------. 1 atlas atlas       424 Apr 20 19:27 setup.sh.local
2025-04-21 00:07:48 (25288): Guest Log: -rw-------. 1 atlas atlas    991292 Apr 20 19:28 agis_schedconf.cvmfs.json
2025-04-21 00:07:48 (25288): Guest Log: drwx------. 4 atlas atlas      4096 Apr 20 19:28 pilot3
2025-04-21 00:07:48 (25288): Guest Log: -rw-------. 1 atlas atlas 194318002 Apr 21 04:06 HITS.44075483._081638.pool.root.1
2025-04-21 00:07:48 (25288): Guest Log: -rw-------. 1 atlas atlas        95 Apr 21 04:07 pilot_heartbeat.json
2025-04-21 00:07:48 (25288): Guest Log: -rw-------. 1 atlas atlas      1034 Apr 21 04:07 memory_monitor_summary.json
2025-04-21 00:07:48 (25288): Guest Log: -rw-------. 1 atlas atlas   1618536 Apr 21 04:07 agis_ddmendpoints.agis.ALL.json
2025-04-21 00:07:48 (25288): Guest Log: -rw-------. 1 atlas atlas    464408 Apr 21 04:07 log.44075483._081638.job.log.tgz.1
2025-04-21 00:07:48 (25288): Guest Log: -rw-------. 1 atlas atlas      7735 Apr 21 04:07 heartbeat.json
2025-04-21 00:07:48 (25288): Guest Log: -rw-------. 1 atlas atlas      4536 Apr 21 04:07 pilotlog.txt
2025-04-21 00:07:48 (25288): Guest Log: -rw-------. 1 atlas atlas   2668673 Apr 21 04:07 log.44075483._081638.job.log.1
2025-04-21 00:07:48 (25288): Guest Log: -rw-------. 1 atlas atlas       357 Apr 21 04:07 output.list
2025-04-21 00:07:48 (25288): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 21 04:07 runtime_log
2025-04-21 00:07:48 (25288): Guest Log: -rw-------. 1 atlas atlas   3153920 Apr 21 04:07 result.tar.gz
2025-04-21 00:07:48 (25288): Guest Log: -rw-r--r--. 1 atlas atlas     10945 Apr 21 04:07 runtime_log.err
2025-04-21 00:07:48 (25288): Guest Log: -rw-------. 1 atlas atlas       660 Apr 21 04:07 kDLMDmMqKQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm0ihLDmf2QPdn.diag
2025-04-21 00:07:48 (25288): Guest Log: Looking for outputfile HITS.44075483._081638.pool.root.1
2025-04-21 00:07:48 (25288): Guest Log: HITS file was successfully produced
2025-04-21 00:07:48 (25288): Guest Log: -rw-------. 1 atlas atlas 194318002 Apr 21 04:06 /home/atlas/RunAtlas/HITS.44075483._081638.pool.root.1
2025-04-21 00:07:50 (25288): Guest Log: Successfully finished the ATLAS job!
2025-04-21 00:07:50 (25288): Guest Log: Copying the results back to the shared directory!
2025-04-21 00:07:50 (25288): Guest Log:  *** Contents of shared directory: ***
2025-04-21 00:07:50 (25288): Guest Log: total 409804
2025-04-21 00:07:50 (25288): Guest Log: -rwxrwxrwx. 1 root root 221619027 Apr 20 19:26 ATLAS.root_0
2025-04-21 00:07:50 (25288): Guest Log: -rwxrwxrwx. 1 root root 194318002 Apr 21 04:07 HITS.pool.root.1
2025-04-21 00:07:50 (25288): Guest Log: -rwxrwxrwx. 1 root root      9460 Apr 20 19:26 init_data.xml
2025-04-21 00:07:50 (25288): Guest Log: -rwxrwxrwx. 1 root root    508892 Apr 20 10:46 input.tar.gz
2025-04-21 00:07:50 (25288): Guest Log: -rwxrwxrwx. 1 root root   3153920 Apr 21 04:07 result.tar.gz
2025-04-21 00:07:50 (25288): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 20 10:46 start_atlas.sh
2025-04-21 00:07:50 (25288): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-21 00:07:50 (25288): VM Completion File Detected.
2025-04-21 00:07:50 (25288): Powering off VM.
2025-04-21 00:07:51 (25288): Successfully stopped VM.
2025-04-21 00:07:51 (25288): Deregistering VM. (boinc_649ac13659d5773d, slot#0)
2025-04-21 00:07:51 (25288): Removing network bandwidth throttle group from VM.
2025-04-21 00:07:52 (25288): Removing VM from VirtualBox.
00:07:57 (25288): called boinc_finish(0)

</stderr_txt>
]]>

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