Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
19:40:38 (2692658): wrapper (7.7.26015): starting
19:40:38 (2692658): wrapper: running run_atlas (--nthreads 4)
[2025-04-20 19:40:38] Arguments: --nthreads 4
[2025-04-20 19:40:38] Threads: 4
[2025-04-20 19:40:38] Checking for CVMFS
[2025-04-20 19:40:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-20 19:40:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-20 19:40:38] Running cvmfs_config stat atlas.cern.ch
[2025-04-20 19:40:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-20 19:40:38] 2.9.2.0 1003648 4775 96876 145082 0 65 27539196 36864000 0 130560 0 4276971 99.993 1172628 12671 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-04-20 19:40:38] CVMFS is ok
[2025-04-20 19:40:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-20 19:40:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-20 19:40:38] Further information can be found at the LHC@home message board.
[2025-04-20 19:40:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-20 19:40:38] Checking for apptainer binary...
[2025-04-20 19:40:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-20 19:40:38] Running /usr/bin/apptainer --version
[2025-04-20 19:40:38] apptainer version 1.3.6-6.1
[2025-04-20 19:40:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-20 19:40:38] atlasA139
[2025-04-20 19:40:38] apptainer works
[2025-04-20 19:40:38] Set ATHENA_PROC_NUMBER=4
[2025-04-20 19:40:38] Set ATHENA_CORE_NUMBER=4
[2025-04-20 19:40:38] Starting ATLAS job with PandaID=6607094503
[2025-04-20 19:40:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-20 20:54:27]  *** The last 200 lines of the pilot log: ***
[2025-04-20 20:54:27]  mtime=0
[2025-04-20 20:54:27]  protocol_id=None
[2025-04-20 20:54:27]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-20 20:54:27]  replicas=None
[2025-04-20 20:54:27]  scope=mc23_13p6TeV
[2025-04-20 20:54:27]  status=None
[2025-04-20 20:54:27]  status_code=0
[2025-04-20 20:54:27]  storage_token=
[2025-04-20 20:54:27]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6607094503/log.44075483._075746.job.log.tgz.1
[2025-04-20 20:54:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a7/fa/log.44075483._075746.job.log.tgz.1
[2025-04-20 20:54:27]  workdir=None
[2025-04-20 20:54:27] ]
[2025-04-20 20:54:27] 2025-04-20 18:54:04,640 | INFO     | transferring file log.44075483._075746.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6607094503/log.44075483._075746.job.log.tgz.1 to /local/data/boinc/
[2025-04-20 20:54:27] 2025-04-20 18:54:04,640 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6607094503/log.44075483._075746.job.log.tgz.1 /local/data/boinc/slots/0/log.44075483._0757
[2025-04-20 20:54:27] 2025-04-20 18:54:04,658 | INFO     | adding to output.list: log.44075483._075746.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a7/fa/log.44075483._075746.job.log.tg
[2025-04-20 20:54:27] 2025-04-20 18:54:04,659 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-20 20:54:27] 2025-04-20 18:54:04,659 | INFO     | summary of transferred files:
[2025-04-20 20:54:27] 2025-04-20 18:54:04,659 | INFO     |  -- lfn=log.44075483._075746.job.log.tgz.1, status_code=0, status=transferred
[2025-04-20 20:54:27] 2025-04-20 18:54:04,659 | INFO     | stage-out finished correctly
[2025-04-20 20:54:27] 2025-04-20 18:54:07,378 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-20 20:54:27] 2025-04-20 18:54:08,131 | WARNING  | process 2702965 can no longer be monitored (due to stat problems) - aborting
[2025-04-20 20:54:27] 2025-04-20 18:54:08,131 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6607094503/memory_monitor_summary.json (trf name=prmon)
[2025-04-20 20:54:27] 2025-04-20 18:54:08,177 | INFO     | number of running child processes to parent process 2702965: 1
[2025-04-20 20:54:27] 2025-04-20 18:54:08,178 | INFO     | maximum number of monitored processes: 6
[2025-04-20 20:54:27] 2025-04-20 18:54:09,281 | INFO     | PID=2696391 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-20 20:54:27] 2025-04-20 18:54:10,087 | INFO     | job 6607094503 has state=finished
[2025-04-20 20:54:27] 2025-04-20 18:54:10,088 | INFO     | preparing for final server update for job 6607094503 in state='finished'
[2025-04-20 20:54:27] 2025-04-20 18:54:10,088 | INFO     | this job has now completed (state=finished)
[2025-04-20 20:54:27] 2025-04-20 18:54:10,088 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-20 20:54:27] 2025-04-20 18:54:10,088 | INFO     | log transfer has been attempted: DONE
[2025-04-20 20:54:27] 2025-04-20 18:54:10,088 | INFO     | job 6607094503 has finished - writing final server update
[2025-04-20 20:54:27] 2025-04-20 18:54:10,088 | INFO     | total number of processed events: 400 (read)
[2025-04-20 20:54:27] 2025-04-20 18:54:10,090 | INFO     | executing command: lscpu
[2025-04-20 20:54:27] 2025-04-20 18:54:10,112 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-20 20:54:27] 2025-04-20 18:54:10,681 | INFO     | monitor loop #338: job 0:6607094503 is in state 'finished'
[2025-04-20 20:54:27] 2025-04-20 18:54:10,681 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 20:54:27] 2025-04-20 18:54:13,184 | INFO     | monitor loop #339: job 0:6607094503 is in state 'finished'
[2025-04-20 20:54:27] 2025-04-20 18:54:13,184 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 20:54:27] 2025-04-20 18:54:15,688 | INFO     | monitor loop #340: job 0:6607094503 is in state 'finished'
[2025-04-20 20:54:27] 2025-04-20 18:54:15,688 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 20:54:27] 2025-04-20 18:54:15,730 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-20 20:54:27] 2025-04-20 18:54:15,730 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6607094503/memory_monitor_summary.json (trf name=prmon)
[2025-04-20 20:54:27] 2025-04-20 18:54:15,730 | INFO     | extracted standard info from prmon json
[2025-04-20 20:54:27] 2025-04-20 18:54:15,731 | INFO     | extracted standard memory fields from prmon json
[2025-04-20 20:54:27] 2025-04-20 18:54:15,731 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-20 20:54:27] 2025-04-20 18:54:15,731 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-20 20:54:27] 2025-04-20 18:54:15,731 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-20 20:54:27] 2025-04-20 18:54:15,731 | INFO     | fitting pss+swap vs Time
[2025-04-20 20:54:27] 2025-04-20 18:54:15,732 | INFO     | sum of square deviations: 85136480.0
[2025-04-20 20:54:27] 2025-04-20 18:54:15,732 | INFO     | sum of deviations: 5236802298.0
[2025-04-20 20:54:27] 2025-04-20 18:54:15,732 | INFO     | mean x: 1745173125.0
[2025-04-20 20:54:27] 2025-04-20 18:54:15,732 | INFO     | mean y: 2373500.6
[2025-04-20 20:54:27] 2025-04-20 18:54:15,732 | INFO     | -- intersect: -107344402304.64636
[2025-04-20 20:54:27] 2025-04-20 18:54:15,732 | INFO     | intersect: -107344402304.64636
[2025-04-20 20:54:27] 2025-04-20 18:54:15,732 | INFO     | chi2: 0.9483147966175183
[2025-04-20 20:54:27] 2025-04-20 18:54:15,732 | INFO     | -- intersect: -107344402304.64636
[2025-04-20 20:54:27] 2025-04-20 18:54:15,732 | INFO     | current memory leak: 61.51 B/s (using 65 data points, chi2=0.95)
[2025-04-20 20:54:27] 2025-04-20 18:54:15,732 | INFO     | ..............................
[2025-04-20 20:54:27] 2025-04-20 18:54:15,732 | INFO     | . Timing measurements:
[2025-04-20 20:54:27] 2025-04-20 18:54:15,732 | INFO     | . get job = 0 s
[2025-04-20 20:54:27] 2025-04-20 18:54:15,732 | INFO     | . initial setup = 1 s
[2025-04-20 20:54:27] 2025-04-20 18:54:15,732 | INFO     | . payload setup = 4 s
[2025-04-20 20:54:27] 2025-04-20 18:54:15,732 | INFO     | . stage-in = 0 s
[2025-04-20 20:54:27] 2025-04-20 18:54:15,732 | INFO     | . payload execution = 4376 s
[2025-04-20 20:54:27] 2025-04-20 18:54:15,732 | INFO     | . stage-out = 0 s
[2025-04-20 20:54:27] 2025-04-20 18:54:15,732 | INFO     | . log creation = 0 s
[2025-04-20 20:54:27] 2025-04-20 18:54:15,733 | INFO     | ..............................
[2025-04-20 20:54:27] 2025-04-20 18:54:15,772 | INFO     | 
[2025-04-20 20:54:27] 2025-04-20 18:54:15,773 | INFO     | job summary report
[2025-04-20 20:54:27] 2025-04-20 18:54:15,773 | INFO     | --------------------------------------------------
[2025-04-20 20:54:27] 2025-04-20 18:54:15,773 | INFO     | PanDA job id: 6607094503
[2025-04-20 20:54:27] 2025-04-20 18:54:15,773 | INFO     | task id: 44075483
[2025-04-20 20:54:27] 2025-04-20 18:54:15,773 | INFO     | errors: (none)
[2025-04-20 20:54:27] 2025-04-20 18:54:15,773 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-20 20:54:27] 2025-04-20 18:54:15,773 | INFO     | pilot state: finished 
[2025-04-20 20:54:27] 2025-04-20 18:54:15,773 | INFO     | transexitcode: 0
[2025-04-20 20:54:27] 2025-04-20 18:54:15,773 | INFO     | exeerrorcode: 0
[2025-04-20 20:54:27] 2025-04-20 18:54:15,773 | INFO     | exeerrordiag: 
[2025-04-20 20:54:27] 2025-04-20 18:54:15,773 | INFO     | exitcode: 0
[2025-04-20 20:54:27] 2025-04-20 18:54:15,773 | INFO     | exitmsg: OK
[2025-04-20 20:54:27] 2025-04-20 18:54:15,773 | INFO     | cpuconsumptiontime: 14946 s
[2025-04-20 20:54:27] 2025-04-20 18:54:15,773 | INFO     | nevents: 400
[2025-04-20 20:54:27] 2025-04-20 18:54:15,773 | INFO     | neventsw: 0
[2025-04-20 20:54:27] 2025-04-20 18:54:15,773 | INFO     | pid: 2702965
[2025-04-20 20:54:27] 2025-04-20 18:54:15,773 | INFO     | pgrp: 2702965
[2025-04-20 20:54:27] 2025-04-20 18:54:15,774 | INFO     | corecount: 4
[2025-04-20 20:54:27] 2025-04-20 18:54:15,774 | INFO     | event service: False
[2025-04-20 20:54:27] 2025-04-20 18:54:15,774 | INFO     | sizes: {0: 2426827, 3: 2427033, 10: 2427061, 4383: 2453157, 4384: 2462104, 4387: 2462160, 4395: 2462458}
[2025-04-20 20:54:27] 2025-04-20 18:54:15,774 | INFO     | --------------------------------------------------
[2025-04-20 20:54:27] 2025-04-20 18:54:15,774 | INFO     | 
[2025-04-20 20:54:27] 2025-04-20 18:54:15,774 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-04-20 20:54:27] 2025-04-20 18:54:15,791 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-20 20:54:27] 2025-04-20 18:54:15,791 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-20 20:54:27] 2025-04-20 18:54:15,791 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-20 20:54:27] 2025-04-20 18:54:15,791 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-20 20:54:27] 2025-04-20 18:54:15,791 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-20 20:54:27] 2025-04-20 18:54:15,791 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-20 20:54:27] 2025-04-20 18:54:15,791 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-20 20:54:27] 2025-04-20 18:54:15,791 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-20 20:54:27] 2025-04-20 18:54:15,791 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-20 20:54:27] 2025-04-20 18:54:15,791 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-20 20:54:27] 2025-04-20 18:54:15,791 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-20 20:54:27] 2025-04-20 18:54:15,791 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-20 20:54:27] 2025-04-20 18:54:15,792 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-20 20:54:27] 2025-04-20 18:54:15,792 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-20 20:54:27] 2025-04-20 18:54:15,792 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-20 20:54:27] 2025-04-20 18:54:15,792 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-20 20:54:27] 2025-04-20 18:54:15,792 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-20 20:54:27] 2025-04-20 18:54:15,792 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-20 20:54:27] 2025-04-20 18:54:15,792 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-20 20:54:27] 2025-04-20 18:54:15,792 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-20 20:54:27] 2025-04-20 18:54:15,792 | INFO     | job 6607094503 has completed (purged errors)
[2025-04-20 20:54:27] 2025-04-20 18:54:15,792 | INFO     | overall cleanup function is called
[2025-04-20 20:54:27] 2025-04-20 18:54:16,799 | INFO     | --- collectZombieJob: --- 10, [2702965]
[2025-04-20 20:54:27] 2025-04-20 18:54:16,799 | INFO     | zombie collector waiting for pid 2702965
[2025-04-20 20:54:27] 2025-04-20 18:54:16,799 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-20 20:54:27] 2025-04-20 18:54:16,799 | INFO     | collected zombie processes
[2025-04-20 20:54:27] 2025-04-20 18:54:16,799 | INFO     | will attempt to kill all subprocesses of pid=2702965
[2025-04-20 20:54:27] 2025-04-20 18:54:16,851 | INFO     | process IDs to be killed: [2702965] (in reverse order)
[2025-04-20 20:54:27] 2025-04-20 18:54:16,885 | WARNING  | found no corresponding commands to process id(s)
[2025-04-20 20:54:27] 2025-04-20 18:54:16,885 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-20 20:54:27] 2025-04-20 18:54:16,887 | INFO     | did not find any defunct processes belonging to 2702965
[2025-04-20 20:54:27] 2025-04-20 18:54:16,888 | INFO     | did not find any defunct processes belonging to 2702965
[2025-04-20 20:54:27] 2025-04-20 18:54:16,888 | INFO     | ready for new job
[2025-04-20 20:54:27] 2025-04-20 18:54:16,888 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-20 20:54:27] 2025-04-20 18:54:16,889 | INFO     | **************************************
[2025-04-20 20:54:27] 2025-04-20 18:54:16,889 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-20 20:54:27] 2025-04-20 18:54:16,889 | INFO     | **************************************
[2025-04-20 20:54:27] 2025-04-20 18:54:16,889 | INFO     | 
[2025-04-20 20:54:27] 2025-04-20 18:54:16,890 | INFO     | architecture information:
[2025-04-20 20:54:27] 2025-04-20 18:54:16,890 | INFO     | executing command: cat /etc/os-release
[2025-04-20 20:54:27] 2025-04-20 18:54:16,903 | INFO     | cat /etc/os-release:
[2025-04-20 20:54:27] NAME="CentOS Linux"
[2025-04-20 20:54:27] VERSION="7 (Core)"
[2025-04-20 20:54:27] ID="centos"
[2025-04-20 20:54:27] ID_LIKE="rhel fedora"
[2025-04-20 20:54:27] VERSION_ID="7"
[2025-04-20 20:54:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-20 20:54:27] ANSI_COLOR="0;31"
[2025-04-20 20:54:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-20 20:54:27] HOME_URL="https://www.centos.org/"
[2025-04-20 20:54:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-20 20:54:27] 
[2025-04-20 20:54:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-20 20:54:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-20 20:54:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-20 20:54:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-20 20:54:27] 
[2025-04-20 20:54:27] 2025-04-20 18:54:16,903 | INFO     | **************************************
[2025-04-20 20:54:27] 2025-04-20 18:54:17,407 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-04-20 20:54:27] 2025-04-20 18:54:17,424 | INFO     | sufficient remaining disk space (327899152384 B)
[2025-04-20 20:54:27] 2025-04-20 18:54:17,425 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-20 20:54:27] 2025-04-20 18:54:17,425 | INFO     | current server update state: UPDATING_FINAL
[2025-04-20 20:54:27] 2025-04-20 18:54:17,425 | INFO     | update_server=False
[2025-04-20 20:54:27] 2025-04-20 18:54:17,425 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-20 20:54:27] 2025-04-20 18:54:17,425 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-20 20:54:27] 2025-04-20 18:54:17,425 | INFO     | found 0 job(s) in 20 queues
[2025-04-20 20:54:27] 2025-04-20 18:54:17,425 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-20 20:54:27] 2025-04-20 18:54:17,425 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-20 20:54:27] 2025-04-20 18:54:17,425 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-20 20:54:27] 2025-04-20 18:54:17,426 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-20 20:54:27] 2025-04-20 18:54:17,426 | INFO     | aborting loop
[2025-04-20 20:54:27] 2025-04-20 18:54:17,574 | INFO     | all job control threads have been joined
[2025-04-20 20:54:27] 2025-04-20 18:54:17,718 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-20 20:54:27] 2025-04-20 18:54:17,886 | INFO     | all data control threads have been joined
[2025-04-20 20:54:27] 2025-04-20 18:54:17,931 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-20 20:54:27] 2025-04-20 18:54:18,430 | INFO     | [job] retrieve thread has finished
[2025-04-20 20:54:27] 2025-04-20 18:54:18,431 | INFO     | [job] queue monitor thread has finished
[2025-04-20 20:54:27] 2025-04-20 18:54:18,431 | INFO     | [job] job monitor thread has finished
[2025-04-20 20:54:27] 2025-04-20 18:54:18,524 | INFO     | [payload] failed_post thread has finished
[2025-04-20 20:54:27] 2025-04-20 18:54:18,577 | INFO     | [job] control thread has finished
[2025-04-20 20:54:27] 2025-04-20 18:54:18,755 | INFO     | all payload control threads have been joined
[2025-04-20 20:54:27] 2025-04-20 18:54:18,889 | INFO     | [job] validate thread has finished
[2025-04-20 20:54:27] 2025-04-20 18:54:18,892 | INFO     | [data] control thread has finished
[2025-04-20 20:54:27] 2025-04-20 18:54:18,961 | INFO     | [payload] validate_post thread has finished
[2025-04-20 20:54:27] 2025-04-20 18:54:18,995 | INFO     | [job] create_data_payload thread has finished
[2025-04-20 20:54:27] 2025-04-20 18:54:19,003 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-20 20:54:27] 2025-04-20 18:54:19,024 | INFO     | [payload] validate_pre thread has finished
[2025-04-20 20:54:27] 2025-04-20 18:54:19,470 | INFO     | [data] copytool_in thread has finished
[2025-04-20 20:54:27] 2025-04-20 18:54:19,476 | INFO     | [payload] execute_payloads thread has finished
[2025-04-20 20:54:27] 2025-04-20 18:54:19,724 | INFO     | [data] copytool_out thread has finished
[2025-04-20 20:54:27] 2025-04-20 18:54:19,761 | INFO     | [payload] control thread has finished
[2025-04-20 20:54:27] 2025-04-20 18:54:21,937 | INFO     | [data] queue_monitor thread has finished
[2025-04-20 20:54:27] 2025-04-20 18:54:22,639 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140275719518016)>', '<ExcThread(monitor, started 140275074709248)>']
[2025-04-20 20:54:27] 2025-04-20 18:54:23,458 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-20 20:54:27] 2025-04-20 18:54:23,458 | INFO     | [monitor] control thread has ended
[2025-04-20 20:54:27] 2025-04-20 18:54:27,665 | INFO     | all workflow threads have been joined
[2025-04-20 20:54:27] 2025-04-20 18:54:27,666 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-20 20:54:27] 2025-04-20 18:54:27,667 | INFO     | traces error code: 0
[2025-04-20 20:54:27] 2025-04-20 18:54:27,667 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-20 20:54:27] 2025-04-20 18:54:27,736 [wrapper] ==== pilot stdout END ====
[2025-04-20 20:54:27] 2025-04-20 18:54:27,740 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-20 20:54:27] 2025-04-20 18:54:27,744 [wrapper] pilotpid: 2696391
[2025-04-20 20:54:27] 2025-04-20 18:54:27,748 [wrapper] Pilot exit status: 0
[2025-04-20 20:54:27] 2025-04-20 18:54:27,759 [wrapper] pandaids: 6607094503
[2025-04-20 20:54:27] 2025-04-20 18:54:27,782 [wrapper] cleanup supervisor_pilot 2712790 2696392
[2025-04-20 20:54:27] 2025-04-20 18:54:27,786 [wrapper] Test setup, not cleaning
[2025-04-20 20:54:27] 2025-04-20 18:54:27,790 [wrapper] apfmon messages muted
[2025-04-20 20:54:27] 2025-04-20 18:54:27,793 [wrapper] ==== wrapper stdout END ====
[2025-04-20 20:54:27] 2025-04-20 18:54:27,797 [wrapper] ==== wrapper stderr END ====
[2025-04-20 20:54:27]  *** Error codes and diagnostics ***
[2025-04-20 20:54:27]     "exeErrorCode": 0,
[2025-04-20 20:54:27]     "exeErrorDiag": "",
[2025-04-20 20:54:27]     "pilotErrorCode": 0,
[2025-04-20 20:54:27]     "pilotErrorDiag": "",
[2025-04-20 20:54:27]  *** Listing of results directory ***
[2025-04-20 20:54:27] total 410576
[2025-04-20 20:54:27] -rw-r--r-- 1 boinc boinc    495897 Apr 19 02:41 pilot3.tar.gz
[2025-04-20 20:54:27] -rw-r--r-- 1 boinc boinc      5111 Apr 19 03:12 queuedata.json
[2025-04-20 20:54:27] -rwx------ 1 boinc boinc     37140 Apr 19 03:13 runpilot2-wrapper.sh
[2025-04-20 20:54:27] -rw-r--r-- 1 boinc boinc       100 Apr 20 19:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-20 20:54:27] -rwxr-xr-x 1 boinc boinc      7986 Apr 20 19:40 run_atlas
[2025-04-20 20:54:27] -rw-r--r-- 1 boinc boinc       105 Apr 20 19:40 job.xml
[2025-04-20 20:54:27] -rw-r--r-- 2 boinc boinc 225127050 Apr 20 19:40 EVNT.44075481._002940.pool.root.1
[2025-04-20 20:54:27] -rw-r--r-- 1 boinc boinc      6856 Apr 20 19:40 init_data.xml
[2025-04-20 20:54:27] drwxrwx--x 2 boinc boinc      4096 Apr 20 19:40 shared
[2025-04-20 20:54:27] -rw-r--r-- 2 boinc boinc    508896 Apr 20 19:40 input.tar.gz
[2025-04-20 20:54:27] -rw-r--r-- 2 boinc boinc     17569 Apr 20 19:40 start_atlas.sh
[2025-04-20 20:54:27] -rw-r--r-- 1 boinc boinc         0 Apr 20 19:40 boinc_lockfile
[2025-04-20 20:54:27] -rw-r--r-- 1 boinc boinc      2579 Apr 20 19:40 pandaJob.out
[2025-04-20 20:54:27] -rw------- 1 boinc boinc       424 Apr 20 19:40 setup.sh.local
[2025-04-20 20:54:27] -rw------- 1 boinc boinc    991284 Apr 20 19:40 agis_schedconf.cvmfs.json
[2025-04-20 20:54:27] -rw------- 1 boinc boinc   1618536 Apr 20 19:40 agis_ddmendpoints.agis.ALL.json
[2025-04-20 20:54:27] drwx------ 4 boinc boinc      4096 Apr 20 19:40 pilot3
[2025-04-20 20:54:27] -rw------- 1 boinc boinc 190077494 Apr 20 20:53 HITS.44075483._075746.pool.root.1
[2025-04-20 20:54:27] -rw-r--r-- 1 boinc boinc       529 Apr 20 20:53 boinc_task_state.xml
[2025-04-20 20:54:27] -rw------- 1 boinc boinc      1018 Apr 20 20:54 memory_monitor_summary.json
[2025-04-20 20:54:27] -rw------- 1 boinc boinc    242793 Apr 20 20:54 log.44075483._075746.job.log.tgz.1
[2025-04-20 20:54:27] -rw------- 1 boinc boinc        95 Apr 20 20:54 pilot_heartbeat.json
[2025-04-20 20:54:27] -rw------- 1 boinc boinc      7662 Apr 20 20:54 heartbeat.json
[2025-04-20 20:54:27] -rw-r--r-- 1 boinc boinc      8192 Apr 20 20:54 boinc_mmap_file
[2025-04-20 20:54:27] -rw-r--r-- 1 boinc boinc        27 Apr 20 20:54 wrapper_checkpoint.txt
[2025-04-20 20:54:27] -rw------- 1 boinc boinc      4480 Apr 20 20:54 pilotlog.txt
[2025-04-20 20:54:27] -rw------- 1 boinc boinc    434617 Apr 20 20:54 log.44075483._075746.job.log.1
[2025-04-20 20:54:27] -rw------- 1 boinc boinc       357 Apr 20 20:54 output.list
[2025-04-20 20:54:27] -rw-r--r-- 1 boinc boinc       620 Apr 20 20:54 runtime_log
[2025-04-20 20:54:27] -rw------- 1 boinc boinc    696320 Apr 20 20:54 result.tar.gz
[2025-04-20 20:54:27] -rw-r--r-- 1 boinc boinc     11114 Apr 20 20:54 runtime_log.err
[2025-04-20 20:54:27] -rw------- 1 boinc boinc       661 Apr 20 20:54 lXuNDmKxBQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmZbgLDmu0G6vn.diag
[2025-04-20 20:54:27] -rw-r--r-- 1 boinc boinc     21776 Apr 20 20:54 stderr.txt
[2025-04-20 20:54:27] HITS file was successfully produced:
[2025-04-20 20:54:27] -rw------- 1 boinc boinc 190077494 Apr 20 20:53 shared/HITS.pool.root.1
[2025-04-20 20:54:27]  *** Contents of shared directory: ***
[2025-04-20 20:54:27] total 406684
[2025-04-20 20:54:27] -rw-r--r-- 2 boinc boinc 225127050 Apr 20 19:40 ATLAS.root_0
[2025-04-20 20:54:27] -rw-r--r-- 2 boinc boinc    508896 Apr 20 19:40 input.tar.gz
[2025-04-20 20:54:27] -rw-r--r-- 2 boinc boinc     17569 Apr 20 19:40 start_atlas.sh
[2025-04-20 20:54:27] -rw------- 1 boinc boinc 190077494 Apr 20 20:53 HITS.pool.root.1
[2025-04-20 20:54:27] -rw------- 1 boinc boinc    696320 Apr 20 20:54 result.tar.gz
20:54:29 (2692658): run_atlas exited; CPU time 14964.663560
20:54:29 (2692658): called boinc_finish(0)

</stderr_txt>
]]>

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