Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:53:41 (97847): wrapper (7.7.26015): starting
22:53:41 (97847): wrapper: running run_atlas (--nthreads 8)
[2025-04-20 22:53:41] Arguments: --nthreads 8
[2025-04-20 22:53:41] Threads: 8
[2025-04-20 22:53:41] Checking for CVMFS
[2025-04-20 22:53:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-20 22:53:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-20 22:53:41] Running cvmfs_config stat atlas.cern.ch
[2025-04-20 22:53:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-20 22:53:41] 2.12.7.0 1461 324 61792 145097 3 56 2542662 4096001 0 130560 0 264239 99.994 77421 7635 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://10.0.0.2:3128 1
[2025-04-20 22:53:41] CVMFS is ok
[2025-04-20 22:53:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-20 22:53:41] Checking for apptainer binary...
[2025-04-20 22:53:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-20 22:53:41] Running /usr/bin/apptainer --version
[2025-04-20 22:53:41] apptainer version 1.4.0-1.el9
[2025-04-20 22:53:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-20 22:53:41] rcruncher-B
[2025-04-20 22:53:41] apptainer works
[2025-04-20 22:53:41] Set ATHENA_PROC_NUMBER=8
[2025-04-20 22:53:41] Set ATHENA_CORE_NUMBER=8
[2025-04-20 22:53:41] Starting ATLAS job with PandaID=6608465916
[2025-04-20 22:53:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-21 00:14:21]  *** The last 200 lines of the pilot log: ***
[2025-04-21 00:14:21]  lfn=log.44075483._090938.job.log.tgz.1
[2025-04-21 00:14:21]  mtime=0
[2025-04-21 00:14:21]  protocol_id=None
[2025-04-21 00:14:21]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-21 00:14:21]  replicas=None
[2025-04-21 00:14:21]  scope=mc23_13p6TeV
[2025-04-21 00:14:21]  status=None
[2025-04-21 00:14:21]  status_code=0
[2025-04-21 00:14:21]  storage_token=
[2025-04-21 00:14:21]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6608465916/log.44075483._090938.job.log.tgz.1
[2025-04-21 00:14:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b9/9e/log.44075483._090938.job.log.tgz.1
[2025-04-21 00:14:21]  workdir=None
[2025-04-21 00:14:21] ]
[2025-04-21 00:14:21] 2025-04-21 05:13:52,352 | INFO     | transferring file log.44075483._090938.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6608465916/log.44075483._090938.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-04-21 00:14:21] 2025-04-21 05:13:52,352 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6608465916/log.44075483._090938.job.log.tgz.1 /var/lib/boinc/slots/0/log.44075483._090938.job
[2025-04-21 00:14:21] 2025-04-21 05:13:52,368 | INFO     | adding to output.list: log.44075483._090938.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b9/9e/log.44075483._090938.job.log.tg
[2025-04-21 00:14:21] 2025-04-21 05:13:52,369 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-21 00:14:21] 2025-04-21 05:13:52,369 | INFO     | summary of transferred files:
[2025-04-21 00:14:21] 2025-04-21 05:13:52,369 | INFO     |  -- lfn=log.44075483._090938.job.log.tgz.1, status_code=0, status=transferred
[2025-04-21 00:14:21] 2025-04-21 05:13:52,369 | INFO     | stage-out finished correctly
[2025-04-21 00:14:21] 2025-04-21 05:13:53,888 | INFO     | PID=101519 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-04-21 00:14:21] 2025-04-21 05:13:53,924 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-21 00:14:21] 2025-04-21 05:13:54,838 | WARNING  | process 107977 can no longer be monitored (due to stat problems) - aborting
[2025-04-21 00:14:21] 2025-04-21 05:13:54,838 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6608465916/memory_monitor_summary.json (trf name=prmon)
[2025-04-21 00:14:21] 2025-04-21 05:13:54,875 | INFO     | number of running child processes to parent process 107977: 1
[2025-04-21 00:14:21] 2025-04-21 05:13:54,875 | INFO     | maximum number of monitored processes: 6
[2025-04-21 00:14:21] 2025-04-21 05:13:56,230 | INFO     | job 6608465916 has state=finished
[2025-04-21 00:14:21] 2025-04-21 05:13:56,230 | INFO     | preparing for final server update for job 6608465916 in state='finished'
[2025-04-21 00:14:21] 2025-04-21 05:13:56,230 | INFO     | this job has now completed (state=finished)
[2025-04-21 00:14:21] 2025-04-21 05:13:56,231 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-21 00:14:21] 2025-04-21 05:13:56,231 | INFO     | log transfer has been attempted: DONE
[2025-04-21 00:14:21] 2025-04-21 05:13:56,231 | INFO     | job 6608465916 has finished - writing final server update
[2025-04-21 00:14:21] 2025-04-21 05:13:56,231 | INFO     | total number of processed events: 400 (read)
[2025-04-21 00:14:21] 2025-04-21 05:13:56,234 | INFO     | executing command: lscpu
[2025-04-21 00:14:21] 2025-04-21 05:13:56,260 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-21 00:14:21] 2025-04-21 05:13:57,378 | INFO     | monitor loop #365: job 0:6608465916 is in state 'finished'
[2025-04-21 00:14:21] 2025-04-21 05:13:57,378 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-21 00:14:21] 2025-04-21 05:13:59,880 | INFO     | monitor loop #366: job 0:6608465916 is in state 'finished'
[2025-04-21 00:14:21] 2025-04-21 05:13:59,881 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-21 00:14:21] 2025-04-21 05:14:02,066 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-21 00:14:21] 2025-04-21 05:14:02,067 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6608465916/memory_monitor_summary.json (trf name=prmon)
[2025-04-21 00:14:21] 2025-04-21 05:14:02,067 | INFO     | extracted standard info from prmon json
[2025-04-21 00:14:21] 2025-04-21 05:14:02,067 | INFO     | extracted standard memory fields from prmon json
[2025-04-21 00:14:21] 2025-04-21 05:14:02,068 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-21 00:14:21] 2025-04-21 05:14:02,068 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-21 00:14:21] 2025-04-21 05:14:02,068 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-21 00:14:21] 2025-04-21 05:14:02,070 | INFO     | fitting pss+swap vs Time
[2025-04-21 00:14:21] 2025-04-21 05:14:02,070 | INFO     | sum of square deviations: 115715658.0
[2025-04-21 00:14:21] 2025-04-21 05:14:02,070 | INFO     | sum of deviations: 13317625591.000002
[2025-04-21 00:14:21] 2025-04-21 05:14:02,070 | INFO     | mean x: 1745210124.5
[2025-04-21 00:14:21] 2025-04-21 05:14:02,070 | INFO     | mean y: 2492613.4166666665
[2025-04-21 00:14:21] 2025-04-21 05:14:02,070 | INFO     | -- intersect: -200852390964.33997
[2025-04-21 00:14:21] 2025-04-21 05:14:02,070 | INFO     | intersect: -200852390964.33997
[2025-04-21 00:14:21] 2025-04-21 05:14:02,071 | INFO     | chi2: 1.4543090098068805
[2025-04-21 00:14:21] 2025-04-21 05:14:02,071 | INFO     | -- intersect: -200852390964.33997
[2025-04-21 00:14:21] 2025-04-21 05:14:02,071 | INFO     | current memory leak: 115.09 B/s (using 72 data points, chi2=1.45)
[2025-04-21 00:14:21] 2025-04-21 05:14:02,071 | INFO     | ..............................
[2025-04-21 00:14:21] 2025-04-21 05:14:02,071 | INFO     | . Timing measurements:
[2025-04-21 00:14:21] 2025-04-21 05:14:02,071 | INFO     | . get job = 0 s
[2025-04-21 00:14:21] 2025-04-21 05:14:02,071 | INFO     | . initial setup = 2 s
[2025-04-21 00:14:21] 2025-04-21 05:14:02,072 | INFO     | . payload setup = 5 s
[2025-04-21 00:14:21] 2025-04-21 05:14:02,072 | INFO     | . stage-in = 0 s
[2025-04-21 00:14:21] 2025-04-21 05:14:02,072 | INFO     | . payload execution = 4776 s
[2025-04-21 00:14:21] 2025-04-21 05:14:02,072 | INFO     | . stage-out = 0 s
[2025-04-21 00:14:21] 2025-04-21 05:14:02,072 | INFO     | . log creation = 0 s
[2025-04-21 00:14:21] 2025-04-21 05:14:02,072 | INFO     | ..............................
[2025-04-21 00:14:21] 2025-04-21 05:14:02,146 | INFO     | 
[2025-04-21 00:14:21] 2025-04-21 05:14:02,146 | INFO     | job summary report
[2025-04-21 00:14:21] 2025-04-21 05:14:02,146 | INFO     | --------------------------------------------------
[2025-04-21 00:14:21] 2025-04-21 05:14:02,146 | INFO     | PanDA job id: 6608465916
[2025-04-21 00:14:21] 2025-04-21 05:14:02,146 | INFO     | task id: 44075483
[2025-04-21 00:14:21] 2025-04-21 05:14:02,146 | INFO     | errors: (none)
[2025-04-21 00:14:21] 2025-04-21 05:14:02,146 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-21 00:14:21] 2025-04-21 05:14:02,146 | INFO     | pilot state: finished 
[2025-04-21 00:14:21] 2025-04-21 05:14:02,146 | INFO     | transexitcode: 0
[2025-04-21 00:14:21] 2025-04-21 05:14:02,146 | INFO     | exeerrorcode: 0
[2025-04-21 00:14:21] 2025-04-21 05:14:02,147 | INFO     | exeerrordiag: 
[2025-04-21 00:14:21] 2025-04-21 05:14:02,147 | INFO     | exitcode: 0
[2025-04-21 00:14:21] 2025-04-21 05:14:02,147 | INFO     | exitmsg: OK
[2025-04-21 00:14:21] 2025-04-21 05:14:02,147 | INFO     | cpuconsumptiontime: 31504 s
[2025-04-21 00:14:21] 2025-04-21 05:14:02,147 | INFO     | nevents: 400
[2025-04-21 00:14:21] 2025-04-21 05:14:02,147 | INFO     | neventsw: 0
[2025-04-21 00:14:21] 2025-04-21 05:14:02,147 | INFO     | pid: 107977
[2025-04-21 00:14:21] 2025-04-21 05:14:02,147 | INFO     | pgrp: 107977
[2025-04-21 00:14:21] 2025-04-21 05:14:02,147 | INFO     | corecount: 8
[2025-04-21 00:14:21] 2025-04-21 05:14:02,147 | INFO     | event service: False
[2025-04-21 00:14:21] 2025-04-21 05:14:02,147 | INFO     | sizes: {0: 2426773, 4: 2426979, 11: 2427007, 4785: 2453240, 4786: 2462181, 4788: 2462237, 4796: 2462535}
[2025-04-21 00:14:21] 2025-04-21 05:14:02,147 | INFO     | --------------------------------------------------
[2025-04-21 00:14:21] 2025-04-21 05:14:02,147 | INFO     | 
[2025-04-21 00:14:21] 2025-04-21 05:14:02,147 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-04-21 00:14:21] 2025-04-21 05:14:02,160 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-21 00:14:21] 2025-04-21 05:14:02,160 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-21 00:14:21] 2025-04-21 05:14:02,160 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-21 00:14:21] 2025-04-21 05:14:02,160 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-21 00:14:21] 2025-04-21 05:14:02,160 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-21 00:14:21] 2025-04-21 05:14:02,160 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-21 00:14:21] 2025-04-21 05:14:02,160 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-21 00:14:21] 2025-04-21 05:14:02,161 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-21 00:14:21] 2025-04-21 05:14:02,161 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-21 00:14:21] 2025-04-21 05:14:02,161 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-21 00:14:21] 2025-04-21 05:14:02,161 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-21 00:14:21] 2025-04-21 05:14:02,161 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-21 00:14:21] 2025-04-21 05:14:02,161 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-21 00:14:21] 2025-04-21 05:14:02,161 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-21 00:14:21] 2025-04-21 05:14:02,161 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-21 00:14:21] 2025-04-21 05:14:02,161 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-21 00:14:21] 2025-04-21 05:14:02,161 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-21 00:14:21] 2025-04-21 05:14:02,161 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-21 00:14:21] 2025-04-21 05:14:02,161 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-21 00:14:21] 2025-04-21 05:14:02,162 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-21 00:14:21] 2025-04-21 05:14:02,162 | INFO     | job 6608465916 has completed (purged errors)
[2025-04-21 00:14:21] 2025-04-21 05:14:02,162 | INFO     | overall cleanup function is called
[2025-04-21 00:14:21] 2025-04-21 05:14:03,170 | INFO     | --- collectZombieJob: --- 10, [107977]
[2025-04-21 00:14:21] 2025-04-21 05:14:03,170 | INFO     | zombie collector waiting for pid 107977
[2025-04-21 00:14:21] 2025-04-21 05:14:03,170 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-21 00:14:21] 2025-04-21 05:14:03,170 | INFO     | collected zombie processes
[2025-04-21 00:14:21] 2025-04-21 05:14:03,170 | INFO     | will attempt to kill all subprocesses of pid=107977
[2025-04-21 00:14:21] 2025-04-21 05:14:03,228 | INFO     | process IDs to be killed: [107977] (in reverse order)
[2025-04-21 00:14:21] 2025-04-21 05:14:03,271 | WARNING  | found no corresponding commands to process id(s)
[2025-04-21 00:14:21] 2025-04-21 05:14:03,272 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-21 00:14:21] 2025-04-21 05:14:03,273 | INFO     | did not find any defunct processes belonging to 107977
[2025-04-21 00:14:21] 2025-04-21 05:14:03,275 | INFO     | did not find any defunct processes belonging to 107977
[2025-04-21 00:14:21] 2025-04-21 05:14:03,275 | INFO     | ready for new job
[2025-04-21 00:14:21] 2025-04-21 05:14:03,275 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-21 00:14:21] 2025-04-21 05:14:03,276 | INFO     | **************************************
[2025-04-21 00:14:21] 2025-04-21 05:14:03,276 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-21 00:14:21] 2025-04-21 05:14:03,276 | INFO     | **************************************
[2025-04-21 00:14:21] 2025-04-21 05:14:03,276 | INFO     | 
[2025-04-21 00:14:21] 2025-04-21 05:14:03,276 | INFO     | pilot is running in a VM
[2025-04-21 00:14:21] 2025-04-21 05:14:03,276 | INFO     | architecture information:
[2025-04-21 00:14:21] 2025-04-21 05:14:03,277 | INFO     | executing command: cat /etc/os-release
[2025-04-21 00:14:21] 2025-04-21 05:14:03,291 | INFO     | cat /etc/os-release:
[2025-04-21 00:14:21] NAME="CentOS Linux"
[2025-04-21 00:14:21] VERSION="7 (Core)"
[2025-04-21 00:14:21] ID="centos"
[2025-04-21 00:14:21] ID_LIKE="rhel fedora"
[2025-04-21 00:14:21] VERSION_ID="7"
[2025-04-21 00:14:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-21 00:14:21] ANSI_COLOR="0;31"
[2025-04-21 00:14:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-21 00:14:21] HOME_URL="https://www.centos.org/"
[2025-04-21 00:14:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-21 00:14:21] 
[2025-04-21 00:14:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-21 00:14:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-21 00:14:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-21 00:14:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-21 00:14:21] 
[2025-04-21 00:14:21] 2025-04-21 05:14:03,291 | INFO     | **************************************
[2025-04-21 00:14:21] 2025-04-21 05:14:03,794 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-04-21 00:14:21] 2025-04-21 05:14:03,813 | INFO     | sufficient remaining disk space (113537712128 B)
[2025-04-21 00:14:21] 2025-04-21 05:14:03,813 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-21 00:14:21] 2025-04-21 05:14:03,813 | INFO     | current server update state: UPDATING_FINAL
[2025-04-21 00:14:21] 2025-04-21 05:14:03,813 | INFO     | update_server=False
[2025-04-21 00:14:21] 2025-04-21 05:14:03,813 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-21 00:14:21] 2025-04-21 05:14:03,814 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-21 00:14:21] 2025-04-21 05:14:03,814 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-21 00:14:21] 2025-04-21 05:14:03,814 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-21 00:14:21] 2025-04-21 05:14:03,814 | INFO     | aborting loop
[2025-04-21 00:14:21] 2025-04-21 05:14:03,915 | INFO     | found 0 job(s) in 20 queues
[2025-04-21 00:14:21] 2025-04-21 05:14:03,915 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-21 00:14:21] 2025-04-21 05:14:03,915 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-21 00:14:21] 2025-04-21 05:14:04,000 | INFO     | all job control threads have been joined
[2025-04-21 00:14:21] 2025-04-21 05:14:04,044 | INFO     | all data control threads have been joined
[2025-04-21 00:14:21] 2025-04-21 05:14:04,496 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-21 00:14:21] 2025-04-21 05:14:04,641 | INFO     | all payload control threads have been joined
[2025-04-21 00:14:21] 2025-04-21 05:14:04,820 | INFO     | [job] retrieve thread has finished
[2025-04-21 00:14:21] 2025-04-21 05:14:04,820 | INFO     | [job] job monitor thread has finished
[2025-04-21 00:14:21] 2025-04-21 05:14:04,821 | INFO     | [job] queue monitor thread has finished
[2025-04-21 00:14:21] 2025-04-21 05:14:05,006 | INFO     | [job] control thread has finished
[2025-04-21 00:14:21] 2025-04-21 05:14:05,049 | INFO     | [data] control thread has finished
[2025-04-21 00:14:21] 2025-04-21 05:14:05,234 | INFO     | [payload] validate_post thread has finished
[2025-04-21 00:14:21] 2025-04-21 05:14:05,409 | INFO     | [data] copytool_in thread has finished
[2025-04-21 00:14:21] 2025-04-21 05:14:05,541 | INFO     | [payload] execute_payloads thread has finished
[2025-04-21 00:14:21] 2025-04-21 05:14:05,646 | INFO     | [payload] control thread has finished
[2025-04-21 00:14:21] 2025-04-21 05:14:05,756 | INFO     | [job] validate thread has finished
[2025-04-21 00:14:21] 2025-04-21 05:14:05,820 | INFO     | [data] copytool_out thread has finished
[2025-04-21 00:14:21] 2025-04-21 05:14:05,958 | INFO     | [job] create_data_payload thread has finished
[2025-04-21 00:14:21] 2025-04-21 05:14:06,064 | INFO     | [payload] validate_pre thread has finished
[2025-04-21 00:14:21] 2025-04-21 05:14:06,321 | INFO     | [payload] failed_post thread has finished
[2025-04-21 00:14:21] 2025-04-21 05:14:08,502 | INFO     | [data] queue_monitor thread has finished
[2025-04-21 00:14:21] 2025-04-21 05:14:14,711 | INFO     | job.realtimelogging is not enabled
[2025-04-21 00:14:21] 2025-04-21 05:14:15,717 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-21 00:14:21] 2025-04-21 05:14:16,457 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140418033973056)>', '<ExcThread(monitor, started 140417211283200)>']
[2025-04-21 00:14:21] 2025-04-21 05:14:16,979 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-21 00:14:21] 2025-04-21 05:14:16,979 | INFO     | [monitor] control thread has ended
[2025-04-21 00:14:21] 2025-04-21 05:14:21,457 | INFO     | all workflow threads have been joined
[2025-04-21 00:14:21] 2025-04-21 05:14:21,457 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-21 00:14:21] 2025-04-21 05:14:21,458 | INFO     | traces error code: 0
[2025-04-21 00:14:21] 2025-04-21 05:14:21,458 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-21 00:14:21] 2025-04-21 05:14:21,537 [wrapper] ==== pilot stdout END ====
[2025-04-21 00:14:21] 2025-04-21 05:14:21,540 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-21 00:14:21] 2025-04-21 05:14:21,543 [wrapper] pilotpid: 101519
[2025-04-21 00:14:21] 2025-04-21 05:14:21,546 [wrapper] Pilot exit status: 0
[2025-04-21 00:14:21] 2025-04-21 05:14:21,556 [wrapper] pandaids: 6608465916
[2025-04-21 00:14:21] 2025-04-21 05:14:21,584 [wrapper] cleanup supervisor_pilot  119279 101520
[2025-04-21 00:14:21] 2025-04-21 05:14:21,587 [wrapper] Test setup, not cleaning
[2025-04-21 00:14:21] 2025-04-21 05:14:21,591 [wrapper] apfmon messages muted
[2025-04-21 00:14:21] 2025-04-21 05:14:21,594 [wrapper] ==== wrapper stdout END ====
[2025-04-21 00:14:21] 2025-04-21 05:14:21,598 [wrapper] ==== wrapper stderr END ====
[2025-04-21 00:14:21]  *** Error codes and diagnostics ***
[2025-04-21 00:14:21]     "exeErrorCode": 0,
[2025-04-21 00:14:21]     "exeErrorDiag": "",
[2025-04-21 00:14:21]     "pilotErrorCode": 0,
[2025-04-21 00:14:21]     "pilotErrorDiag": "",
[2025-04-21 00:14:21]  *** Listing of results directory ***
[2025-04-21 00:14:21] total 417132
[2025-04-21 00:14:21] -rw-r--r--. 1 boinc boinc      5111 Apr 19 20:44 queuedata.json
[2025-04-21 00:14:21] -rw-r--r--. 1 boinc boinc    495897 Apr 19 20:44 pilot3.tar.gz
[2025-04-21 00:14:21] -rwx------. 1 boinc boinc     37140 Apr 19 20:44 runpilot2-wrapper.sh
[2025-04-21 00:14:21] -rw-r--r--. 1 boinc boinc       100 Apr 20 22:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-21 00:14:21] -rwxr-xr-x. 1 boinc boinc      7986 Apr 20 22:53 run_atlas
[2025-04-21 00:14:21] -rw-r--r--. 1 boinc boinc       105 Apr 20 22:53 job.xml
[2025-04-21 00:14:21] -rw-r--r--. 2 boinc boinc 225550350 Apr 20 22:53 EVNT.44075481._003542.pool.root.1
[2025-04-21 00:14:21] -rw-r--r--. 1 boinc boinc      6388 Apr 20 22:53 init_data.xml
[2025-04-21 00:14:21] -rw-r--r--. 2 boinc boinc     17569 Apr 20 22:53 start_atlas.sh
[2025-04-21 00:14:21] drwxrwx--x. 2 boinc boinc        68 Apr 20 22:53 shared
[2025-04-21 00:14:21] -rw-r--r--. 2 boinc boinc    508888 Apr 20 22:53 input.tar.gz
[2025-04-21 00:14:21] -rw-r--r--. 1 boinc boinc         0 Apr 20 22:53 boinc_lockfile
[2025-04-21 00:14:21] -rw-r--r--. 1 boinc boinc      2578 Apr 20 22:53 pandaJob.out
[2025-04-21 00:14:21] -rw-------. 1 boinc boinc       424 Apr 20 22:53 setup.sh.local
[2025-04-21 00:14:21] -rw-------. 1 boinc boinc    991284 Apr 20 22:53 agis_schedconf.cvmfs.json
[2025-04-21 00:14:21] -rw-------. 1 boinc boinc   1618536 Apr 20 22:53 agis_ddmendpoints.agis.ALL.json
[2025-04-21 00:14:21] drwx------. 4 boinc boinc      4096 Apr 20 22:53 pilot3
[2025-04-21 00:14:21] -rw-------. 1 boinc boinc        95 Apr 21 00:13 pilot_heartbeat.json
[2025-04-21 00:14:21] -rw-------. 1 boinc boinc 196190338 Apr 21 00:13 HITS.44075483._090938.pool.root.1
[2025-04-21 00:14:21] -rw-r--r--. 1 boinc boinc       529 Apr 21 00:13 boinc_task_state.xml
[2025-04-21 00:14:21] -rw-------. 1 boinc boinc      1011 Apr 21 00:13 memory_monitor_summary.json
[2025-04-21 00:14:21] -rw-------. 1 boinc boinc    307460 Apr 21 00:13 log.44075483._090938.job.log.tgz.1
[2025-04-21 00:14:21] -rw-------. 1 boinc boinc      7666 Apr 21 00:14 heartbeat.json
[2025-04-21 00:14:21] -rw-r--r--. 1 boinc boinc      8192 Apr 21 00:14 boinc_mmap_file
[2025-04-21 00:14:21] -rw-r--r--. 1 boinc boinc        27 Apr 21 00:14 wrapper_checkpoint.txt
[2025-04-21 00:14:21] -rw-------. 1 boinc boinc      4488 Apr 21 00:14 pilotlog.txt
[2025-04-21 00:14:21] -rw-------. 1 boinc boinc    465571 Apr 21 00:14 log.44075483._090938.job.log.1
[2025-04-21 00:14:21] -rw-------. 1 boinc boinc       357 Apr 21 00:14 output.list
[2025-04-21 00:14:21] -rw-r--r--. 1 boinc boinc       620 Apr 21 00:14 runtime_log
[2025-04-21 00:14:21] -rw-------. 1 boinc boinc    788480 Apr 21 00:14 result.tar.gz
[2025-04-21 00:14:21] -rw-r--r--. 1 boinc boinc     10978 Apr 21 00:14 runtime_log.err
[2025-04-21 00:14:21] -rw-------. 1 boinc boinc       644 Apr 21 00:14 dlVMDmluYQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmVLjLDmV4Y37n.diag
[2025-04-21 00:14:21] -rw-r--r--. 1 boinc boinc     21297 Apr 21 00:14 stderr.txt
[2025-04-21 00:14:21] HITS file was successfully produced:
[2025-04-21 00:14:21] -rw-------. 1 boinc boinc 196190338 Apr 21 00:13 shared/HITS.pool.root.1
[2025-04-21 00:14:21]  *** Contents of shared directory: ***
[2025-04-21 00:14:21] total 413156
[2025-04-21 00:14:21] -rw-r--r--. 2 boinc boinc 225550350 Apr 20 22:53 ATLAS.root_0
[2025-04-21 00:14:21] -rw-r--r--. 2 boinc boinc     17569 Apr 20 22:53 start_atlas.sh
[2025-04-21 00:14:21] -rw-r--r--. 2 boinc boinc    508888 Apr 20 22:53 input.tar.gz
[2025-04-21 00:14:21] -rw-------. 1 boinc boinc 196190338 Apr 21 00:13 HITS.pool.root.1
[2025-04-21 00:14:21] -rw-------. 1 boinc boinc    788480 Apr 21 00:14 result.tar.gz
00:14:23 (97847): run_atlas exited; CPU time 31523.043292
00:14:23 (97847): called boinc_finish(0)

</stderr_txt>
]]>

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