Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-20 09:49:46 (6548): Detected: vboxwrapper 26206
2025-04-20 09:49:46 (6548): Detected: BOINC client v8.0.2
2025-04-20 09:49:47 (6548): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-04-20 09:49:47 (6548): Successfully copied 'init_data.xml' to the shared directory.
2025-04-20 09:49:48 (6548): Create VM. (boinc_6bb0f6d484406766, slot#0)
2025-04-20 09:49:48 (6548): Setting Memory Size for VM. (4400MB)
2025-04-20 09:49:49 (6548): Setting CPU Count for VM. (4)
2025-04-20 09:49:49 (6548): Setting Chipset Options for VM.
2025-04-20 09:49:49 (6548): Setting Graphics Controller Options for VM.
2025-04-20 09:49:50 (6548): Setting Boot Options for VM.
2025-04-20 09:49:50 (6548): Setting Network Configuration for NAT.
2025-04-20 09:49:50 (6548): Enabling VM Network Access.
2025-04-20 09:49:50 (6548): Disabling USB Support for VM.
2025-04-20 09:49:51 (6548): Disabling COM Port Support for VM.
2025-04-20 09:49:51 (6548): Disabling LPT Port Support for VM.
2025-04-20 09:49:51 (6548): Disabling Audio Support for VM.
2025-04-20 09:49:52 (6548): Disabling Clipboard Support for VM.
2025-04-20 09:49:52 (6548): Disabling Drag and Drop Support for VM.
2025-04-20 09:49:52 (6548): Adding storage controller(s) to VM.
2025-04-20 09:49:52 (6548): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-20 09:49:55 (6548): Adding VirtualBox Guest Additions to VM.
2025-04-20 09:49:56 (6548): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-20 09:49:56 (6548): forwarding host port 63452 to guest port 80
2025-04-20 09:49:56 (6548): Enabling remote desktop for VM.
2025-04-20 09:49:56 (6548): Required extension pack not installed, remote desktop not enabled.
2025-04-20 09:49:56 (6548): Enabling shared directory for VM.
2025-04-20 09:49:57 (6548): Starting VM using VBoxManage interface. (boinc_6bb0f6d484406766, slot#0)
2025-04-20 09:50:04 (6548): Successfully started VM. (PID = '6068')
2025-04-20 09:50:04 (6548): Reporting VM Process ID to BOINC.
2025-04-20 09:50:04 (6548): Guest Log: BIOS: VirtualBox 7.0.6
2025-04-20 09:50:04 (6548): Guest Log: CPUID EDX: 0x178bfbff
2025-04-20 09:50:04 (6548): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-20 09:50:04 (6548): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-20 09:50:04 (6548): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-20 09:50:04 (6548): Detected: Web Application Enabled (http://localhost:63452)
2025-04-20 09:50:04 (6548): Preference change detected
2025-04-20 09:50:04 (6548): Setting CPU throttle for VM. (100%)
2025-04-20 09:50:04 (6548): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-20 09:50:06 (6548): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-20 09:50:06 (6548): Guest Log: BIOS: Booting from Hard Disk...
2025-04-20 09:50:09 (6548): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-20 09:50:09 (6548): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-20 09:50:09 (6548): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-20 09:50:09 (6548): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-20 09:50:09 (6548): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-20 09:50:09 (6548): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-20 09:50:09 (6548): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-20 09:50:09 (6548): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-20 09:50:09 (6548): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-20 09:50:09 (6548): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-20 09:50:09 (6548): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-20 09:50:09 (6548): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-20 09:50:09 (6548): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-20 09:50:09 (6548): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-20 09:50:09 (6548): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-20 09:50:09 (6548): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-20 09:50:09 (6548): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-20 09:50:09 (6548): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-20 09:50:09 (6548): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-20 09:50:09 (6548): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-20 09:50:09 (6548): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-20 09:50:09 (6548): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-20 09:50:09 (6548): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-20 09:50:09 (6548): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-20 09:50:09 (6548): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-20 09:50:09 (6548): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-20 09:50:09 (6548): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-20 09:50:09 (6548): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-20 09:50:09 (6548): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-20 09:50:09 (6548): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-20 09:50:09 (6548): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-20 09:50:09 (6548): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-20 09:50:14 (6548): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-20 09:50:14 (6548): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-20 09:50:20 (6548): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-20 09:50:20 (6548): Guest Log: 00:00:00.000206 main     Log opened 2025-04-20T09:50:19.105348000Z
2025-04-20 09:50:20 (6548): Guest Log: 00:00:00.000322 main     OS Product: Linux
2025-04-20 09:50:20 (6548): Guest Log: 00:00:00.000356 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-20 09:50:20 (6548): Guest Log: 00:00:00.000385 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-20 09:50:20 (6548): Guest Log: 00:00:00.000416 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-20 09:50:20 (6548): Guest Log: 00:00:00.000417 main     Process ID: 1266
2025-04-20 09:50:20 (6548): Guest Log: 00:00:00.000417 main     Package type: LINUX_64BITS_GENERIC
2025-04-20 09:50:20 (6548): Guest Log: 00:00:00.001360 main     5.2.32 r132073 started. Verbose level = 0
2025-04-20 09:50:20 (6548): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-20 09:50:20 (6548): Guest Log: [INFO] Mounting shared directory
2025-04-20 09:50:20 (6548): Guest Log: [INFO] Checking for init_data.xml
2025-04-20 09:50:23 (6548): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-20 09:50:23 (6548): Guest Log: [INFO] Detected branch: prod
2025-04-20 09:50:27 (6548): VM state change detected. (old = 'running', new = 'paused')
2025-04-20 09:50:47 (6548): VM state change detected. (old = 'paused', new = 'running')
2025-04-20 09:50:48 (6548): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-20 09:50:48 (6548): Guest Log: Copying input files
2025-04-20 09:50:50 (6548): Guest Log: Copied input files into RunAtlas.
2025-04-20 09:50:50 (6548): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-20 09:50:50 (6548): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-20 09:50:50 (6548): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-20 09:50:50 (6548): Guest Log: Further information can be found at the LHC@home message board.
2025-04-20 09:50:50 (6548): Guest Log: 00:00:10.150812 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 189 033 316 000ns (GuestNow=1 745 135 430 074 706 000 ns GuestLast=1 745 142 619 108 022 000 ns fSetTimeLastLoop=true )
2025-04-20 09:50:59 (6548): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-20 09:50:59 (6548): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-20 09:50:59 (6548): Guest Log: 2.6.3.0 1540 0 32124 145067 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-20 09:51:01 (6548): Guest Log: copied the webapp to /var/www
2025-04-20 09:51:01 (6548): Guest Log: ATHENA_PROC_NUMBER=4
2025-04-20 09:51:01 (6548): Guest Log: ATHENA_CORE_NUMBER=4
2025-04-20 09:51:02 (6548): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-20 09:51:02 (6548): Guest Log:  *** Starting ATLAS job. (PandaID=6607694625 taskID=44178420) ***
2025-04-20 09:52:17 (6548): VM state change detected. (old = 'running', new = 'paused')
2025-04-20 09:52:37 (6548): VM state change detected. (old = 'paused', new = 'running')
2025-04-20 09:52:57 (6548): VM state change detected. (old = 'running', new = 'paused')
2025-04-20 09:53:17 (6548): VM state change detected. (old = 'paused', new = 'running')
2025-04-20 09:53:37 (6548): VM state change detected. (old = 'running', new = 'paused')
2025-04-20 09:53:57 (6548): VM state change detected. (old = 'paused', new = 'running')
2025-04-20 09:54:27 (6548): VM state change detected. (old = 'running', new = 'paused')
2025-04-20 09:54:47 (6548): VM state change detected. (old = 'paused', new = 'running')
2025-04-20 09:55:07 (6548): VM state change detected. (old = 'running', new = 'paused')
2025-04-20 09:55:27 (6548): VM state change detected. (old = 'paused', new = 'running')
2025-04-20 09:58:37 (6548): VM state change detected. (old = 'running', new = 'paused')
2025-04-20 09:58:57 (6548): VM state change detected. (old = 'paused', new = 'running')
2025-04-20 09:59:07 (6548): Guest Log:  *** Job finished ***
2025-04-20 09:59:07 (6548): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-20 09:59:07 (6548): Guest Log: 2025-04-20 07:56:37,989 | INFO     | [payload] failed_post thread has finished
2025-04-20 09:59:07 (6548): Guest Log: 2025-04-20 07:56:38,096 | INFO     | [job] create_data_payload thread has finished
2025-04-20 09:59:07 (6548): Guest Log: 2025-04-20 07:56:39,678 | INFO     | [data] queue_monitor thread has finished
2025-04-20 09:59:07 (6548): Guest Log: 2025-04-20 07:56:41,779 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140713828669248)>', '<ExcThread(monitor, started 140713610131200)>']
2025-04-20 09:59:07 (6548): Guest Log: 2025-04-20 07:56:41,959 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-20 09:59:07 (6548): Guest Log: 2025-04-20 07:56:41,960 | INFO     | [monitor] control thread has ended
2025-04-20 09:59:07 (6548): Guest Log: 2025-04-20 07:56:46,785 | INFO     | all workflow threads have been joined
2025-04-20 09:59:07 (6548): Guest Log: 2025-04-20 07:56:46,785 | INFO     | end of generic workflow (traces error code: 0)
2025-04-20 09:59:07 (6548): Guest Log: 2025-04-20 07:56:46,785 | INFO     | traces error code: 0
2025-04-20 09:59:07 (6548): Guest Log: 2025-04-20 07:56:46,786 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-20 09:59:07 (6548): Guest Log: 2025-04-20 07:56:46,907 [wrapper] ==== pilot stdout END ====
2025-04-20 09:59:07 (6548): Guest Log: 2025-04-20 07:56:46,913 [wrapper] ==== wrapper stdout RESUME ====
2025-04-20 09:59:07 (6548): Guest Log: 2025-04-20 07:56:46,919 [wrapper] pilotpid: 5866
2025-04-20 09:59:07 (6548): Guest Log: 2025-04-20 07:56:46,925 [wrapper] Pilot exit status: 0
2025-04-20 09:59:07 (6548): Guest Log: 2025-04-20 07:56:47,033 [wrapper] pandaids: 6607694625
2025-04-20 09:59:07 (6548): Guest Log: 2025-04-20 07:56:47,066 [wrapper] cleanup supervisor_pilot  5872 5867
2025-04-20 09:59:07 (6548): Guest Log: 2025-04-20 07:56:47,072 [wrapper] Test setup, not cleaning
2025-04-20 09:59:07 (6548): Guest Log: 2025-04-20 07:56:47,078 [wrapper] apfmon messages muted
2025-04-20 09:59:07 (6548): Guest Log: 2025-04-20 07:56:47,084 [wrapper] ==== wrapper stdout END ====
2025-04-20 09:59:07 (6548): Guest Log: 2025-04-20 07:56:47,090 [wrapper] ==== wrapper stderr END ====
2025-04-20 09:59:07 (6548): Guest Log:  *** Error codes and diagnostics ***
2025-04-20 09:59:07 (6548): Guest Log:     "exeErrorCode": 0,
2025-04-20 09:59:07 (6548): Guest Log:     "exeErrorDiag": "",
2025-04-20 09:59:07 (6548): Guest Log:     "pilotErrorCode": 1305,
2025-04-20 09:59:07 (6548): Guest Log:     "pilotErrorDiag": "Failed to execute payload:/bin/bash: Sim_tf.py: command not found",
2025-04-20 09:59:07 (6548): Guest Log:  *** Listing of results directory ***
2025-04-20 09:59:07 (6548): Guest Log: total 3872
2025-04-20 09:59:07 (6548): Guest Log: -rw-r--r--. 1 atlas atlas  495897 Apr 19 10:20 pilot3.tar.gz
2025-04-20 09:59:07 (6548): Guest Log: -rwx------. 1 atlas atlas   37140 Apr 19 10:26 runpilot2-wrapper.sh
2025-04-20 09:59:07 (6548): Guest Log: -rw-r--r--. 1 atlas atlas    5111 Apr 19 10:26 queuedata.json
2025-04-20 09:59:07 (6548): Guest Log: -rwxr-xr-x. 1 atlas atlas    9079 Apr 20 07:50 init_data.xml
2025-04-20 09:59:07 (6548): Guest Log: -rwxr-xr-x. 1 atlas atlas  508876 Apr 20 07:50 input.tar.gz
2025-04-20 09:59:07 (6548): Guest Log: -rwxr-xr-x. 1 atlas atlas   17569 Apr 20 07:50 start_atlas.sh
2025-04-20 09:59:07 (6548): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Apr 20 07:50 EVNT.44178418._000001.pool.root.1 -> /data/./ATLAS.root_0
2025-04-20 09:59:07 (6548): Guest Log: -rw-r--r--. 1 atlas atlas    2588 Apr 20 07:50 pandaJob.out
2025-04-20 09:59:07 (6548): Guest Log: -rw-------. 1 atlas atlas     424 Apr 20 07:50 setup.sh.local
2025-04-20 09:59:07 (6548): Guest Log: -rw-------. 1 atlas atlas  991292 Apr 20 07:52 agis_schedconf.cvmfs.json
2025-04-20 09:59:07 (6548): Guest Log: -rw-------. 1 atlas atlas 1618536 Apr 20 07:52 agis_ddmendpoints.agis.ALL.json
2025-04-20 09:59:07 (6548): Guest Log: drwx------. 4 atlas atlas    4096 Apr 20 07:52 pilot3
2025-04-20 09:59:07 (6548): Guest Log: -rw-------. 1 atlas atlas    8248 Apr 20 07:54 log.44178420._000003.job.log.tgz.1
2025-04-20 09:59:07 (6548): Guest Log: -rw-------. 1 atlas atlas      95 Apr 20 07:56 pilot_heartbeat.json
2025-04-20 09:59:07 (6548): Guest Log: -rw-------. 1 atlas atlas    2204 Apr 20 07:56 heartbeat.json
2025-04-20 09:59:07 (6548): Guest Log: -rw-------. 1 atlas atlas    4413 Apr 20 07:56 pilotlog.txt
2025-04-20 09:59:07 (6548): Guest Log: -rw-------. 1 atlas atlas   83571 Apr 20 07:56 log.44178420._000003.job.log.1
2025-04-20 09:59:07 (6548): Guest Log: -rw-------. 1 atlas atlas     188 Apr 20 07:56 output.list
2025-04-20 09:59:07 (6548): Guest Log: -rw-r--r--. 1 atlas atlas     620 Apr 20 07:56 runtime_log
2025-04-20 09:59:07 (6548): Guest Log: -rw-------. 1 atlas atlas  102400 Apr 20 07:56 result.tar.gz
2025-04-20 09:59:07 (6548): Guest Log: -rw-r--r--. 1 atlas atlas   10797 Apr 20 07:56 runtime_log.err
2025-04-20 09:59:07 (6548): Guest Log: -rw-------. 1 atlas atlas     644 Apr 20 07:56 IGzMDmCaKQ7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmYP6KDmDejp3n.diag
2025-04-20 09:59:07 (6548): Guest Log: Looking for outputfile HITS.44178420._000003.pool.root.1
2025-04-20 09:59:07 (6548): Guest Log: No HITS file was produced
2025-04-20 09:59:07 (6548): Guest Log: Successfully finished the ATLAS job!
2025-04-20 09:59:07 (6548): Guest Log: Copying the results back to the shared directory!
2025-04-20 09:59:07 (6548): Guest Log:  *** Contents of shared directory: ***
2025-04-20 09:59:07 (6548): Guest Log: total 317456
2025-04-20 09:59:07 (6548): Guest Log: -rwxrwxrwx. 1 root root 324424363 Apr 20 07:49 ATLAS.root_0
2025-04-20 09:59:07 (6548): Guest Log: -rwxrwxrwx. 1 root root      9079 Apr 20 07:49 init_data.xml
2025-04-20 09:59:07 (6548): Guest Log: -rwxrwxrwx. 1 root root    508876 Apr 20 07:47 input.tar.gz
2025-04-20 09:59:07 (6548): Guest Log: -rwxrwxrwx. 1 root root    102400 Apr 20  2025 result.tar.gz
2025-04-20 09:59:07 (6548): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 20 07:47 start_atlas.sh
2025-04-20 09:59:07 (6548): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-20 09:59:07 (6548): VM Completion File Detected.
2025-04-20 09:59:07 (6548): Powering off VM.
2025-04-20 09:59:08 (6548): Successfully stopped VM.
2025-04-20 09:59:08 (6548): Deregistering VM. (boinc_6bb0f6d484406766, slot#0)
2025-04-20 09:59:08 (6548): Removing network bandwidth throttle group from VM.
2025-04-20 09:59:08 (6548): Removing VM from VirtualBox.
09:59:13 (6548): called boinc_finish(0)

</stderr_txt>
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