Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:29:23 (599246): wrapper (7.7.26015): starting
10:29:23 (599246): wrapper: running run_atlas (--nthreads 12)
[2025-04-20 10:29:23] Arguments: --nthreads 12
[2025-04-20 10:29:23] Threads: 12
[2025-04-20 10:29:23] Checking for CVMFS
[2025-04-20 10:29:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-20 10:29:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-20 10:29:23] Running cvmfs_config stat atlas.cern.ch
[2025-04-20 10:29:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-20 10:29:23] 2.12.7.0 3563 927 58188 145068 2 64 3830754 4096001 0 130560 0 1381649 99.989 322526 2125 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-04-20 10:29:23] CVMFS is ok
[2025-04-20 10:29:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-20 10:29:23] Small home clusters do not require a local http proxy but it is suggested if
[2025-04-20 10:29:23] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-04-20 10:29:23] Further information can be found at the LHC@home message board.
[2025-04-20 10:29:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-20 10:29:23] Checking for apptainer binary...
[2025-04-20 10:29:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-20 10:29:23] Running /usr/bin/apptainer --version
[2025-04-20 10:29:23] apptainer version 1.3.6
[2025-04-20 10:29:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-20 10:29:23] subzero
[2025-04-20 10:29:23] apptainer works
[2025-04-20 10:29:23] Set ATHENA_PROC_NUMBER=12
[2025-04-20 10:29:23] Set ATHENA_CORE_NUMBER=12
[2025-04-20 10:29:23] Starting ATLAS job with PandaID=6607094491
[2025-04-20 10:29:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/david/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-20 11:15:35]  *** The last 200 lines of the pilot log: ***
[2025-04-20 11:15:35]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-20 11:15:35]  is_altstaged=None
[2025-04-20 11:15:35]  is_tar=False
[2025-04-20 11:15:35]  lfn=log.44075483._075734.job.log.tgz.1
[2025-04-20 11:15:35]  mtime=0
[2025-04-20 11:15:35]  protocol_id=None
[2025-04-20 11:15:35]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-20 11:15:35]  replicas=None
[2025-04-20 11:15:35]  scope=mc23_13p6TeV
[2025-04-20 11:15:35]  status=None
[2025-04-20 11:15:35]  status_code=0
[2025-04-20 11:15:35]  storage_token=
[2025-04-20 11:15:35]  surl=/home/david/boinc/slots/0/PanDA_Pilot-6607094491/log.44075483._075734.job.log.tgz.1
[2025-04-20 11:15:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/69/d7/log.44075483._075734.job.log.tgz.1
[2025-04-20 11:15:35]  workdir=None
[2025-04-20 11:15:35] ]
[2025-04-20 11:15:35] 2025-04-20 09:15:13,002 | INFO     | transferring file log.44075483._075734.job.log.tgz.1 from /home/david/boinc/slots/0/PanDA_Pilot-6607094491/log.44075483._075734.job.log.tgz.1 to /home/david/boinc/
[2025-04-20 11:15:35] 2025-04-20 09:15:13,002 | INFO     | executing command: /usr/bin/env mv /home/david/boinc/slots/0/PanDA_Pilot-6607094491/log.44075483._075734.job.log.tgz.1 /home/david/boinc/slots/0/log.44075483._0757
[2025-04-20 11:15:35] 2025-04-20 09:15:13,011 | INFO     | adding to output.list: log.44075483._075734.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/69/d7/log.44075483._075734.job.log.tg
[2025-04-20 11:15:35] 2025-04-20 09:15:13,012 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-20 11:15:35] 2025-04-20 09:15:13,012 | INFO     | summary of transferred files:
[2025-04-20 11:15:35] 2025-04-20 09:15:13,012 | INFO     |  -- lfn=log.44075483._075734.job.log.tgz.1, status_code=0, status=transferred
[2025-04-20 11:15:35] 2025-04-20 09:15:13,012 | INFO     | stage-out finished correctly
[2025-04-20 11:15:35] 2025-04-20 09:15:13,048 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-20 11:15:35] 2025-04-20 09:15:14,028 | INFO     | job 6607094491 has state=finished
[2025-04-20 11:15:35] 2025-04-20 09:15:14,028 | INFO     | preparing for final server update for job 6607094491 in state='finished'
[2025-04-20 11:15:35] 2025-04-20 09:15:14,029 | INFO     | this job has now completed (state=finished)
[2025-04-20 11:15:35] 2025-04-20 09:15:14,029 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-20 11:15:35] 2025-04-20 09:15:14,029 | INFO     | log transfer has been attempted: DONE
[2025-04-20 11:15:35] 2025-04-20 09:15:14,029 | INFO     | job 6607094491 has finished - writing final server update
[2025-04-20 11:15:35] 2025-04-20 09:15:14,029 | INFO     | total number of processed events: 400 (read)
[2025-04-20 11:15:35] 2025-04-20 09:15:14,030 | INFO     | executing command: lscpu
[2025-04-20 11:15:35] 2025-04-20 09:15:14,045 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-20 11:15:35] 2025-04-20 09:15:16,318 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-20 11:15:35] 2025-04-20 09:15:16,319 | INFO     | using path: /home/david/boinc/slots/0/PanDA_Pilot-6607094491/memory_monitor_summary.json (trf name=prmon)
[2025-04-20 11:15:35] 2025-04-20 09:15:16,319 | INFO     | extracted standard info from prmon json
[2025-04-20 11:15:35] 2025-04-20 09:15:16,319 | INFO     | extracted standard memory fields from prmon json
[2025-04-20 11:15:35] 2025-04-20 09:15:16,319 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-20 11:15:35] 2025-04-20 09:15:16,320 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-20 11:15:35] 2025-04-20 09:15:16,320 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-20 11:15:35] 2025-04-20 09:15:16,320 | INFO     | fitting pss+swap vs Time
[2025-04-20 11:15:35] 2025-04-20 09:15:16,320 | INFO     | sum of square deviations: 17003109.5
[2025-04-20 11:15:35] 2025-04-20 09:15:16,320 | INFO     | sum of deviations: 9657334102.5
[2025-04-20 11:15:35] 2025-04-20 09:15:16,321 | INFO     | mean x: 1745139219.5
[2025-04-20 11:15:35] 2025-04-20 09:15:16,321 | INFO     | mean y: 2875820.1842105263
[2025-04-20 11:15:35] 2025-04-20 09:15:16,321 | INFO     | -- intersect: -991191852302.1974
[2025-04-20 11:15:35] 2025-04-20 09:15:16,321 | INFO     | intersect: -991191852302.1974
[2025-04-20 11:15:35] 2025-04-20 09:15:16,321 | INFO     | chi2: 1.1829995633439163
[2025-04-20 11:15:35] 2025-04-20 09:15:16,321 | INFO     | -- intersect: -991191852302.1974
[2025-04-20 11:15:35] 2025-04-20 09:15:16,321 | INFO     | current memory leak: 567.97 B/s (using 38 data points, chi2=1.18)
[2025-04-20 11:15:35] 2025-04-20 09:15:16,321 | INFO     | ..............................
[2025-04-20 11:15:35] 2025-04-20 09:15:16,321 | INFO     | . Timing measurements:
[2025-04-20 11:15:35] 2025-04-20 09:15:16,321 | INFO     | . get job = 0 s
[2025-04-20 11:15:35] 2025-04-20 09:15:16,321 | INFO     | . initial setup = 1 s
[2025-04-20 11:15:35] 2025-04-20 09:15:16,321 | INFO     | . payload setup = 2 s
[2025-04-20 11:15:35] 2025-04-20 09:15:16,321 | INFO     | . stage-in = 0 s
[2025-04-20 11:15:35] 2025-04-20 09:15:16,321 | INFO     | . payload execution = 2725 s
[2025-04-20 11:15:35] 2025-04-20 09:15:16,321 | INFO     | . stage-out = 0 s
[2025-04-20 11:15:35] 2025-04-20 09:15:16,322 | INFO     | . log creation = 0 s
[2025-04-20 11:15:35] 2025-04-20 09:15:16,322 | INFO     | ..............................
[2025-04-20 11:15:35] 2025-04-20 09:15:16,462 | INFO     | 
[2025-04-20 11:15:35] 2025-04-20 09:15:16,462 | INFO     | job summary report
[2025-04-20 11:15:35] 2025-04-20 09:15:16,462 | INFO     | --------------------------------------------------
[2025-04-20 11:15:35] 2025-04-20 09:15:16,462 | INFO     | PanDA job id: 6607094491
[2025-04-20 11:15:35] 2025-04-20 09:15:16,463 | INFO     | task id: 44075483
[2025-04-20 11:15:35] 2025-04-20 09:15:16,463 | INFO     | errors: (none)
[2025-04-20 11:15:35] 2025-04-20 09:15:16,463 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-20 11:15:35] 2025-04-20 09:15:16,463 | INFO     | pilot state: finished 
[2025-04-20 11:15:35] 2025-04-20 09:15:16,463 | INFO     | transexitcode: 0
[2025-04-20 11:15:35] 2025-04-20 09:15:16,463 | INFO     | exeerrorcode: 0
[2025-04-20 11:15:35] 2025-04-20 09:15:16,463 | INFO     | exeerrordiag: 
[2025-04-20 11:15:35] 2025-04-20 09:15:16,463 | INFO     | exitcode: 0
[2025-04-20 11:15:35] 2025-04-20 09:15:16,463 | INFO     | exitmsg: OK
[2025-04-20 11:15:35] 2025-04-20 09:15:16,463 | INFO     | cpuconsumptiontime: 24191 s
[2025-04-20 11:15:35] 2025-04-20 09:15:16,463 | INFO     | nevents: 400
[2025-04-20 11:15:35] 2025-04-20 09:15:16,463 | INFO     | neventsw: 0
[2025-04-20 11:15:35] 2025-04-20 09:15:16,463 | INFO     | pid: 609488
[2025-04-20 11:15:35] 2025-04-20 09:15:16,463 | INFO     | pgrp: 609488
[2025-04-20 11:15:35] 2025-04-20 09:15:16,463 | INFO     | corecount: 12
[2025-04-20 11:15:35] 2025-04-20 09:15:16,463 | INFO     | event service: False
[2025-04-20 11:15:35] 2025-04-20 09:15:16,464 | INFO     | sizes: {0: 2426826, 2: 2427032, 11: 2427060, 2732: 2461309, 2735: 2461423}
[2025-04-20 11:15:35] 2025-04-20 09:15:16,464 | INFO     | --------------------------------------------------
[2025-04-20 11:15:35] 2025-04-20 09:15:16,464 | INFO     | 
[2025-04-20 11:15:35] 2025-04-20 09:15:16,464 | INFO     | executing command: ls -lF /home/david/boinc/slots/0
[2025-04-20 11:15:35] 2025-04-20 09:15:16,473 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-20 11:15:35] 2025-04-20 09:15:16,473 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-20 11:15:35] 2025-04-20 09:15:16,474 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-20 11:15:35] 2025-04-20 09:15:16,474 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-20 11:15:35] 2025-04-20 09:15:16,474 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-20 11:15:35] 2025-04-20 09:15:16,474 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-20 11:15:35] 2025-04-20 09:15:16,474 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-20 11:15:35] 2025-04-20 09:15:16,474 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-20 11:15:35] 2025-04-20 09:15:16,474 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-20 11:15:35] 2025-04-20 09:15:16,474 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-20 11:15:35] 2025-04-20 09:15:16,474 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-20 11:15:35] 2025-04-20 09:15:16,474 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-20 11:15:35] 2025-04-20 09:15:16,474 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-20 11:15:35] 2025-04-20 09:15:16,474 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-20 11:15:35] 2025-04-20 09:15:16,474 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-20 11:15:35] 2025-04-20 09:15:16,474 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-20 11:15:35] 2025-04-20 09:15:16,474 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-20 11:15:35] 2025-04-20 09:15:16,474 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-20 11:15:35] 2025-04-20 09:15:16,474 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-20 11:15:35] 2025-04-20 09:15:16,475 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-20 11:15:35] 2025-04-20 09:15:16,475 | INFO     | job 6607094491 has completed (purged errors)
[2025-04-20 11:15:35] 2025-04-20 09:15:16,475 | INFO     | overall cleanup function is called
[2025-04-20 11:15:35] 2025-04-20 09:15:17,350 | INFO     | PID=602939 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-04-20 11:15:35] 2025-04-20 09:15:17,482 | INFO     | --- collectZombieJob: --- 10, [609488]
[2025-04-20 11:15:35] 2025-04-20 09:15:17,482 | INFO     | zombie collector waiting for pid 609488
[2025-04-20 11:15:35] 2025-04-20 09:15:17,482 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-20 11:15:35] 2025-04-20 09:15:17,482 | INFO     | collected zombie processes
[2025-04-20 11:15:35] 2025-04-20 09:15:17,482 | INFO     | will attempt to kill all subprocesses of pid=609488
[2025-04-20 11:15:35] 2025-04-20 09:15:17,559 | INFO     | process IDs to be killed: [609488] (in reverse order)
[2025-04-20 11:15:35] 2025-04-20 09:15:17,585 | WARNING  | found no corresponding commands to process id(s)
[2025-04-20 11:15:35] 2025-04-20 09:15:17,585 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-20 11:15:35] 2025-04-20 09:15:17,587 | INFO     | did not find any defunct processes belonging to 609488
[2025-04-20 11:15:35] 2025-04-20 09:15:17,588 | INFO     | did not find any defunct processes belonging to 609488
[2025-04-20 11:15:35] 2025-04-20 09:15:17,589 | INFO     | ready for new job
[2025-04-20 11:15:35] 2025-04-20 09:15:17,589 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-20 11:15:35] 2025-04-20 09:15:17,589 | INFO     | **************************************
[2025-04-20 11:15:35] 2025-04-20 09:15:17,589 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-20 11:15:35] 2025-04-20 09:15:17,590 | INFO     | **************************************
[2025-04-20 11:15:35] 2025-04-20 09:15:17,590 | INFO     | 
[2025-04-20 11:15:35] 2025-04-20 09:15:17,590 | INFO     | architecture information:
[2025-04-20 11:15:35] 2025-04-20 09:15:17,590 | INFO     | executing command: cat /etc/os-release
[2025-04-20 11:15:35] 2025-04-20 09:15:17,597 | INFO     | cat /etc/os-release:
[2025-04-20 11:15:35] NAME="CentOS Linux"
[2025-04-20 11:15:35] VERSION="7 (Core)"
[2025-04-20 11:15:35] ID="centos"
[2025-04-20 11:15:35] ID_LIKE="rhel fedora"
[2025-04-20 11:15:35] VERSION_ID="7"
[2025-04-20 11:15:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-20 11:15:35] ANSI_COLOR="0;31"
[2025-04-20 11:15:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-20 11:15:35] HOME_URL="https://www.centos.org/"
[2025-04-20 11:15:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-20 11:15:35] 
[2025-04-20 11:15:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-20 11:15:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-20 11:15:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-20 11:15:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-20 11:15:35] 
[2025-04-20 11:15:35] 2025-04-20 09:15:17,597 | INFO     | **************************************
[2025-04-20 11:15:35] 2025-04-20 09:15:18,089 | WARNING  | process 609488 can no longer be monitored (due to stat problems) - aborting
[2025-04-20 11:15:35] 2025-04-20 09:15:18,100 | INFO     | executing command: df -mP /home/david/boinc/slots/0
[2025-04-20 11:15:35] 2025-04-20 09:15:18,107 | INFO     | sufficient remaining disk space (238188232704 B)
[2025-04-20 11:15:35] 2025-04-20 09:15:18,107 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-20 11:15:35] 2025-04-20 09:15:18,108 | INFO     | current server update state: UPDATING_FINAL
[2025-04-20 11:15:35] 2025-04-20 09:15:18,108 | INFO     | update_server=False
[2025-04-20 11:15:35] 2025-04-20 09:15:18,108 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-20 11:15:35] 2025-04-20 09:15:18,108 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-20 11:15:35] 2025-04-20 09:15:18,108 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-20 11:15:35] 2025-04-20 09:15:18,108 | INFO     | found 0 job(s) in 20 queues
[2025-04-20 11:15:35] 2025-04-20 09:15:18,108 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-20 11:15:35] 2025-04-20 09:15:18,109 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-20 11:15:35] 2025-04-20 09:15:18,142 | INFO     | using path: /home/david/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-04-20 11:15:35] 2025-04-20 09:15:18,216 | INFO     | number of running child processes to parent process 609488: 1
[2025-04-20 11:15:35] 2025-04-20 09:15:18,216 | INFO     | maximum number of monitored processes: 6
[2025-04-20 11:15:35] 2025-04-20 09:15:18,216 | INFO     | aborting job monitoring since job object (job id=6607094491) has expired
[2025-04-20 11:15:35] 2025-04-20 09:15:18,217 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-20 11:15:35] 2025-04-20 09:15:18,217 | INFO     | will abort loop
[2025-04-20 11:15:35] 2025-04-20 09:15:18,240 | INFO     | all payload control threads have been joined
[2025-04-20 11:15:35] 2025-04-20 09:15:18,288 | INFO     | all data control threads have been joined
[2025-04-20 11:15:35] 2025-04-20 09:15:18,555 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-20 11:15:35] 2025-04-20 09:15:18,784 | INFO     | all job control threads have been joined
[2025-04-20 11:15:35] 2025-04-20 09:15:19,086 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-20 11:15:35] 2025-04-20 09:15:19,113 | INFO     | [job] retrieve thread has finished
[2025-04-20 11:15:35] 2025-04-20 09:15:19,113 | INFO     | [job] queue monitor thread has finished
[2025-04-20 11:15:35] 2025-04-20 09:15:19,114 | INFO     | [payload] validate_pre thread has finished
[2025-04-20 11:15:35] 2025-04-20 09:15:19,222 | INFO     | [job] job monitor thread has finished
[2025-04-20 11:15:35] 2025-04-20 09:15:19,243 | INFO     | [payload] control thread has finished
[2025-04-20 11:15:35] 2025-04-20 09:15:19,293 | INFO     | [data] control thread has finished
[2025-04-20 11:15:35] 2025-04-20 09:15:19,571 | INFO     | [payload] failed_post thread has finished
[2025-04-20 11:15:35] 2025-04-20 09:15:19,588 | INFO     | [data] copytool_in thread has finished
[2025-04-20 11:15:35] 2025-04-20 09:15:19,656 | INFO     | [payload] execute_payloads thread has finished
[2025-04-20 11:15:35] 2025-04-20 09:15:19,789 | INFO     | [job] control thread has finished
[2025-04-20 11:15:35] 2025-04-20 09:15:20,098 | INFO     | [payload] validate_post thread has finished
[2025-04-20 11:15:35] 2025-04-20 09:15:20,497 | INFO     | [job] validate thread has finished
[2025-04-20 11:15:35] 2025-04-20 09:15:20,560 | INFO     | [data] copytool_out thread has finished
[2025-04-20 11:15:35] 2025-04-20 09:15:20,562 | INFO     | [job] create_data_payload thread has finished
[2025-04-20 11:15:35] 2025-04-20 09:15:23,091 | INFO     | [data] queue_monitor thread has finished
[2025-04-20 11:15:35] 2025-04-20 09:15:28,161 | INFO     | job.realtimelogging is not enabled
[2025-04-20 11:15:35] 2025-04-20 09:15:29,167 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-20 11:15:35] 2025-04-20 09:15:30,705 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140697383266112)>', '<ExcThread(monitor, started 140696619054848)>']
[2025-04-20 11:15:35] 2025-04-20 09:15:31,173 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-20 11:15:35] 2025-04-20 09:15:31,173 | INFO     | [monitor] control thread has ended
[2025-04-20 11:15:35] 2025-04-20 09:15:35,730 | INFO     | all workflow threads have been joined
[2025-04-20 11:15:35] 2025-04-20 09:15:35,731 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-20 11:15:35] 2025-04-20 09:15:35,731 | INFO     | traces error code: 0
[2025-04-20 11:15:35] 2025-04-20 09:15:35,731 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-20 11:15:35] 2025-04-20 09:15:35,774 [wrapper] ==== pilot stdout END ====
[2025-04-20 11:15:35] 2025-04-20 09:15:35,776 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-20 11:15:35] 2025-04-20 09:15:35,778 [wrapper] pilotpid: 602939
[2025-04-20 11:15:35] 2025-04-20 09:15:35,779 [wrapper] Pilot exit status: 0
[2025-04-20 11:15:35] 2025-04-20 09:15:35,784 [wrapper] pandaids: 6607094491
[2025-04-20 11:15:35] 2025-04-20 09:15:35,801 [wrapper] cleanup supervisor_pilot  622158 602940
[2025-04-20 11:15:35] 2025-04-20 09:15:35,803 [wrapper] Test setup, not cleaning
[2025-04-20 11:15:35] 2025-04-20 09:15:35,804 [wrapper] apfmon messages muted
[2025-04-20 11:15:35] 2025-04-20 09:15:35,805 [wrapper] ==== wrapper stdout END ====
[2025-04-20 11:15:35] 2025-04-20 09:15:35,807 [wrapper] ==== wrapper stderr END ====
[2025-04-20 11:15:35]  *** Error codes and diagnostics ***
[2025-04-20 11:15:35]     "exeErrorCode": 0,
[2025-04-20 11:15:35]     "exeErrorDiag": "",
[2025-04-20 11:15:35]     "pilotErrorCode": 0,
[2025-04-20 11:15:35]     "pilotErrorDiag": "",
[2025-04-20 11:15:35]  *** Listing of results directory ***
[2025-04-20 11:15:35] total 414440
[2025-04-20 11:15:35] -rw-r--r-- 1 david david    495897 Apr 19 02:41 pilot3.tar.gz
[2025-04-20 11:15:35] -rw-r--r-- 1 david david      5111 Apr 19 03:10 queuedata.json
[2025-04-20 11:15:35] -rwx------ 1 david david     37140 Apr 19 03:10 runpilot2-wrapper.sh
[2025-04-20 11:15:35] -rw-r--r-- 1 david david       100 Apr 20 10:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-20 11:15:35] -rwxr-xr-x 1 david david      7986 Apr 20 10:29 run_atlas
[2025-04-20 11:15:35] -rw-r--r-- 1 david david       105 Apr 20 10:29 job.xml
[2025-04-20 11:15:35] -rw-r--r-- 2 david david     17569 Apr 20 10:29 start_atlas.sh
[2025-04-20 11:15:35] drwxrwx--x 1 david david        76 Apr 20 10:29 shared
[2025-04-20 11:15:35] -rw-r--r-- 2 david david    508891 Apr 20 10:29 input.tar.gz
[2025-04-20 11:15:35] -rw-r--r-- 1 david david      7526 Apr 20 10:29 init_data.xml
[2025-04-20 11:15:35] -rw-r--r-- 2 david david 225127050 Apr 20 10:29 EVNT.44075481._002940.pool.root.1
[2025-04-20 11:15:35] -rw-r--r-- 1 david david         0 Apr 20 10:29 boinc_setup_complete
[2025-04-20 11:15:35] -rw-r--r-- 1 david david         0 Apr 20 10:29 boinc_lockfile
[2025-04-20 11:15:35] -rw-r--r-- 1 david david      2578 Apr 20 10:29 pandaJob.out
[2025-04-20 11:15:35] -rw------- 1 david david       424 Apr 20 10:29 setup.sh.local
[2025-04-20 11:15:35] -rw------- 1 david david    991300 Apr 20 10:29 agis_schedconf.cvmfs.json
[2025-04-20 11:15:35] -rw------- 1 david david   1618536 Apr 20 10:29 agis_ddmendpoints.agis.ALL.json
[2025-04-20 11:15:35] drwx------ 1 david david       368 Apr 20 10:29 pilot3
[2025-04-20 11:15:35] -rw------- 1 david david        95 Apr 20 11:14 pilot_heartbeat.json
[2025-04-20 11:15:35] -rw------- 1 david david 194155074 Apr 20 11:14 HITS.44075483._075734.pool.root.1
[2025-04-20 11:15:35] -rw-r--r-- 1 david david       529 Apr 20 11:15 boinc_task_state.xml
[2025-04-20 11:15:35] -rw------- 1 david david      1017 Apr 20 11:15 memory_monitor_summary.json
[2025-04-20 11:15:35] -rw------- 1 david david    333260 Apr 20 11:15 log.44075483._075734.job.log.tgz.1
[2025-04-20 11:15:35] -rw------- 1 david david      7657 Apr 20 11:15 heartbeat.json
[2025-04-20 11:15:35] -rw-r--r-- 1 david david        27 Apr 20 11:15 wrapper_checkpoint.txt
[2025-04-20 11:15:35] -rw-r--r-- 1 david david      8192 Apr 20 11:15 boinc_mmap_file
[2025-04-20 11:15:35] -rw------- 1 david david      5074 Apr 20 11:15 pilotlog.txt
[2025-04-20 11:15:35] -rw------- 1 david david    293332 Apr 20 11:15 log.44075483._075734.job.log.1
[2025-04-20 11:15:35] -rw------- 1 david david       357 Apr 20 11:15 output.list
[2025-04-20 11:15:35] -rw-r--r-- 1 david david       620 Apr 20 11:15 runtime_log
[2025-04-20 11:15:35] -rw------- 1 david david    645120 Apr 20 11:15 result.tar.gz
[2025-04-20 11:15:35] -rw------- 1 david david       638 Apr 20 11:15 YeOLDmFuBQ7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmet5KDm40g17m.diag
[2025-04-20 11:15:35] -rw-r--r-- 1 david david     11014 Apr 20 11:15 runtime_log.err
[2025-04-20 11:15:35] -rw-r--r-- 1 david david     21458 Apr 20 11:15 stderr.txt
[2025-04-20 11:15:35] HITS file was successfully produced:
[2025-04-20 11:15:35] -rw------- 1 david david 194155074 Apr 20 11:14 shared/HITS.pool.root.1
[2025-04-20 11:15:35]  *** Contents of shared directory: ***
[2025-04-20 11:15:35] total 410612
[2025-04-20 11:15:35] -rw-r--r-- 2 david david     17569 Apr 20 10:29 start_atlas.sh
[2025-04-20 11:15:35] -rw-r--r-- 2 david david    508891 Apr 20 10:29 input.tar.gz
[2025-04-20 11:15:35] -rw-r--r-- 2 david david 225127050 Apr 20 10:29 ATLAS.root_0
[2025-04-20 11:15:35] -rw------- 1 david david 194155074 Apr 20 11:14 HITS.pool.root.1
[2025-04-20 11:15:35] -rw------- 1 david david    645120 Apr 20 11:15 result.tar.gz
11:15:37 (599246): run_atlas exited; CPU time 24211.235507
11:15:37 (599246): called boinc_finish(0)

</stderr_txt>
]]>

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