Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:09:52 (16534): wrapper (7.7.26015): starting
03:09:52 (16534): wrapper: running run_atlas (--nthreads 8)
[2025-04-20 03:09:52] Arguments: --nthreads 8
[2025-04-20 03:09:52] Threads: 8
[2025-04-20 03:09:52] Checking for CVMFS
[2025-04-20 03:09:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-20 03:09:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-20 03:09:52] Running cvmfs_config stat atlas.cern.ch
[2025-04-20 03:09:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-20 03:09:52] 2.11.2.0 2819 159050 124108 145066 2 58 14570991 20275201 1 130560 0 20045144 99.974 8589007 41659 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-20 03:09:52] CVMFS is ok
[2025-04-20 03:09:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-20 03:09:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-20 03:09:52] Further information can be found at the LHC@home message board.
[2025-04-20 03:09:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-20 03:09:52] Checking for apptainer binary...
[2025-04-20 03:09:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-20 03:09:52] Running /usr/bin/apptainer --version
[2025-04-20 03:09:52] apptainer version 1.3.2-1.el7
[2025-04-20 03:09:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-20 03:09:54] c-204-32.aglt2.org
[2025-04-20 03:09:54] apptainer works
[2025-04-20 03:09:54] Set ATHENA_PROC_NUMBER=8
[2025-04-20 03:09:54] Set ATHENA_CORE_NUMBER=8
[2025-04-20 03:09:54] Starting ATLAS job with PandaID=6608566497
[2025-04-20 03:09:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-20 05:22:28]  *** The last 200 lines of the pilot log: ***
[2025-04-20 05:22:28] 2025-04-20 09:22:10,863 | INFO     | monitor loop #583: job 0:6608566497 is in state 'finished'
[2025-04-20 05:22:28] 2025-04-20 09:22:10,863 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 05:22:28] 2025-04-20 09:22:11,491 | INFO     | PID=20373 has CPU usage=8.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-20 05:22:28] 2025-04-20 09:22:13,366 | INFO     | monitor loop #584: job 0:6608566497 is in state 'finished'
[2025-04-20 05:22:28] 2025-04-20 09:22:13,367 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 05:22:28] 2025-04-20 09:22:15,869 | INFO     | monitor loop #585: job 0:6608566497 is in state 'finished'
[2025-04-20 05:22:28] 2025-04-20 09:22:15,869 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 05:22:28] 2025-04-20 09:22:16,303 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-20 05:22:28] 2025-04-20 09:22:16,304 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6608566497/memory_monitor_summary.json (trf name=prmon)
[2025-04-20 05:22:28] 2025-04-20 09:22:16,305 | INFO     | extracted standard info from prmon json
[2025-04-20 05:22:28] 2025-04-20 09:22:16,305 | INFO     | extracted standard memory fields from prmon json
[2025-04-20 05:22:28] 2025-04-20 09:22:16,305 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-20 05:22:28] 2025-04-20 09:22:16,306 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-20 05:22:28] 2025-04-20 09:22:16,306 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-20 05:22:28] 2025-04-20 09:22:16,311 | INFO     | fitting pss+swap vs Time
[2025-04-20 05:22:28] 2025-04-20 09:22:16,311 | INFO     | sum of square deviations: 681212772.5
[2025-04-20 05:22:28] 2025-04-20 09:22:16,312 | INFO     | sum of deviations: 24587357016.499992
[2025-04-20 05:22:28] 2025-04-20 09:22:16,312 | INFO     | mean x: 1745136976.5
[2025-04-20 05:22:28] 2025-04-20 09:22:16,312 | INFO     | mean y: 2446417.2230769233
[2025-04-20 05:22:28] 2025-04-20 09:22:16,312 | INFO     | -- intersect: -62985664810.39025
[2025-04-20 05:22:28] 2025-04-20 09:22:16,312 | INFO     | intersect: -62985664810.39025
[2025-04-20 05:22:28] 2025-04-20 09:22:16,313 | INFO     | chi2: 3.1525390001968043
[2025-04-20 05:22:28] 2025-04-20 09:22:16,313 | INFO     | sum of square deviations: 605592750.0
[2025-04-20 05:22:28] 2025-04-20 09:22:16,314 | INFO     | sum of deviations: 32173732884.000004
[2025-04-20 05:22:28] 2025-04-20 09:22:16,314 | INFO     | mean x: 1745136824.0
[2025-04-20 05:22:28] 2025-04-20 09:22:16,314 | INFO     | mean y: 2461178.552
[2025-04-20 05:22:28] 2025-04-20 09:22:16,314 | INFO     | -- intersect: -92712595303.56099
[2025-04-20 05:22:28] 2025-04-20 09:22:16,314 | INFO     | intersect: -92712595303.56099
[2025-04-20 05:22:28] 2025-04-20 09:22:16,315 | INFO     | chi2: 2.39307857617577
[2025-04-20 05:22:28] 2025-04-20 09:22:16,315 | INFO     | current chi2=2.39307857617577 (change=24.090437072265356 %)
[2025-04-20 05:22:28] 2025-04-20 09:22:16,315 | INFO     | right removable region: 124
[2025-04-20 05:22:28] 2025-04-20 09:22:16,315 | INFO     | sum of square deviations: 605592750.0
[2025-04-20 05:22:28] 2025-04-20 09:22:16,316 | INFO     | sum of deviations: -5169138414.0
[2025-04-20 05:22:28] 2025-04-20 09:22:16,316 | INFO     | mean x: 1745137129.0
[2025-04-20 05:22:28] 2025-04-20 09:22:16,316 | INFO     | mean y: 2506099.016
[2025-04-20 05:22:28] 2025-04-20 09:22:16,316 | INFO     | -- intersect: 14898416545.783358
[2025-04-20 05:22:28] 2025-04-20 09:22:16,317 | INFO     | intersect: 14898416545.783358
[2025-04-20 05:22:28] 2025-04-20 09:22:16,317 | INFO     | chi2: 0.977543012454094
[2025-04-20 05:22:28] 2025-04-20 09:22:16,317 | INFO     | current chi2=0.977543012454094 (change=68.99188202293234 %)
[2025-04-20 05:22:28] 2025-04-20 09:22:16,317 | INFO     | sum of square deviations: 535786790.0
[2025-04-20 05:22:28] 2025-04-20 09:22:16,318 | INFO     | sum of deviations: -13049068790.5
[2025-04-20 05:22:28] 2025-04-20 09:22:16,318 | INFO     | mean x: 1745137281.5
[2025-04-20 05:22:28] 2025-04-20 09:22:16,318 | INFO     | mean y: 2523227.2916666665
[2025-04-20 05:22:28] 2025-04-20 09:22:16,318 | INFO     | -- intersect: 42505281526.27784
[2025-04-20 05:22:28] 2025-04-20 09:22:16,318 | INFO     | intersect: 42505281526.27784
[2025-04-20 05:22:28] 2025-04-20 09:22:16,319 | INFO     | chi2: 0.8090541638068764
[2025-04-20 05:22:28] 2025-04-20 09:22:16,319 | INFO     | current chi2=0.8090541638068764 (change=17.235952433871027 %)
[2025-04-20 05:22:28] 2025-04-20 09:22:16,319 | INFO     | left removable region: 20
[2025-04-20 05:22:28] 2025-04-20 09:22:16,319 | INFO     | sum of square deviations: 348769330.0
[2025-04-20 05:22:28] 2025-04-20 09:22:16,320 | INFO     | sum of deviations: -5358054956.500002
[2025-04-20 05:22:28] 2025-04-20 09:22:16,320 | INFO     | mean x: 1745137403.5
[2025-04-20 05:22:28] 2025-04-20 09:22:16,320 | INFO     | mean y: 2545026.798076923
[2025-04-20 05:22:28] 2025-04-20 09:22:16,320 | INFO     | -- intersect: 26812649328.67783
[2025-04-20 05:22:28] 2025-04-20 09:22:16,320 | INFO     | intersect: 26812649328.67783
[2025-04-20 05:22:28] 2025-04-20 09:22:16,321 | INFO     | chi2: 0.008083441093581705
[2025-04-20 05:22:28] 2025-04-20 09:22:16,321 | INFO     | -- intersect: 26812649328.67783
[2025-04-20 05:22:28] 2025-04-20 09:22:16,321 | INFO     | current memory leak: -15.36 B/s (using 104 data points, chi2=0.01)
[2025-04-20 05:22:28] 2025-04-20 09:22:16,321 | INFO     | ..............................
[2025-04-20 05:22:28] 2025-04-20 09:22:16,321 | INFO     | . Timing measurements:
[2025-04-20 05:22:28] 2025-04-20 09:22:16,322 | INFO     | . get job = 0 s
[2025-04-20 05:22:28] 2025-04-20 09:22:16,322 | INFO     | . initial setup = 2 s
[2025-04-20 05:22:28] 2025-04-20 09:22:16,322 | INFO     | . payload setup = 9 s
[2025-04-20 05:22:28] 2025-04-20 09:22:16,322 | INFO     | . stage-in = 0 s
[2025-04-20 05:22:28] 2025-04-20 09:22:16,322 | INFO     | . payload execution = 7884 s
[2025-04-20 05:22:28] 2025-04-20 09:22:16,322 | INFO     | . stage-out = 1 s
[2025-04-20 05:22:28] 2025-04-20 09:22:16,322 | INFO     | . log creation = 0 s
[2025-04-20 05:22:28] 2025-04-20 09:22:16,323 | INFO     | ..............................
[2025-04-20 05:22:28] 2025-04-20 09:22:16,725 | INFO     | 
[2025-04-20 05:22:28] 2025-04-20 09:22:16,726 | INFO     | job summary report
[2025-04-20 05:22:28] 2025-04-20 09:22:16,726 | INFO     | --------------------------------------------------
[2025-04-20 05:22:28] 2025-04-20 09:22:16,726 | INFO     | PanDA job id: 6608566497
[2025-04-20 05:22:28] 2025-04-20 09:22:16,726 | INFO     | task id: 44075483
[2025-04-20 05:22:28] 2025-04-20 09:22:16,726 | INFO     | errors: (none)
[2025-04-20 05:22:28] 2025-04-20 09:22:16,727 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-20 05:22:28] 2025-04-20 09:22:16,727 | INFO     | pilot state: finished 
[2025-04-20 05:22:28] 2025-04-20 09:22:16,727 | INFO     | transexitcode: 0
[2025-04-20 05:22:28] 2025-04-20 09:22:16,727 | INFO     | exeerrorcode: 0
[2025-04-20 05:22:28] 2025-04-20 09:22:16,727 | INFO     | exeerrordiag: 
[2025-04-20 05:22:28] 2025-04-20 09:22:16,727 | INFO     | exitcode: 0
[2025-04-20 05:22:28] 2025-04-20 09:22:16,728 | INFO     | exitmsg: OK
[2025-04-20 05:22:28] 2025-04-20 09:22:16,728 | INFO     | cpuconsumptiontime: 56888 s
[2025-04-20 05:22:28] 2025-04-20 09:22:16,728 | INFO     | nevents: 400
[2025-04-20 05:22:28] 2025-04-20 09:22:16,728 | INFO     | neventsw: 0
[2025-04-20 05:22:28] 2025-04-20 09:22:16,728 | INFO     | pid: 26766
[2025-04-20 05:22:28] 2025-04-20 09:22:16,728 | INFO     | pgrp: 26766
[2025-04-20 05:22:28] 2025-04-20 09:22:16,729 | INFO     | corecount: 8
[2025-04-20 05:22:28] 2025-04-20 09:22:16,729 | INFO     | event service: False
[2025-04-20 05:22:28] 2025-04-20 09:22:16,729 | INFO     | sizes: {0: 2426659, 1: 2426801, 7: 2427007, 11: 2427035, 7897: 2454522, 7900: 2463675, 7909: 2463789}
[2025-04-20 05:22:28] 2025-04-20 09:22:16,729 | INFO     | --------------------------------------------------
[2025-04-20 05:22:28] 2025-04-20 09:22:16,729 | INFO     | 
[2025-04-20 05:22:28] 2025-04-20 09:22:16,730 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-20 05:22:28] 2025-04-20 09:22:16,761 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-20 05:22:28] 2025-04-20 09:22:16,761 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-20 05:22:28] 2025-04-20 09:22:16,761 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-20 05:22:28] 2025-04-20 09:22:16,762 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-20 05:22:28] 2025-04-20 09:22:16,762 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-20 05:22:28] 2025-04-20 09:22:16,762 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-20 05:22:28] 2025-04-20 09:22:16,762 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-20 05:22:28] 2025-04-20 09:22:16,762 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-20 05:22:28] 2025-04-20 09:22:16,762 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-20 05:22:28] 2025-04-20 09:22:16,763 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-20 05:22:28] 2025-04-20 09:22:16,763 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-20 05:22:28] 2025-04-20 09:22:16,763 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-20 05:22:28] 2025-04-20 09:22:16,763 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-20 05:22:28] 2025-04-20 09:22:16,763 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-20 05:22:28] 2025-04-20 09:22:16,763 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-20 05:22:28] 2025-04-20 09:22:16,764 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-20 05:22:28] 2025-04-20 09:22:16,764 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-20 05:22:28] 2025-04-20 09:22:16,764 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-20 05:22:28] 2025-04-20 09:22:16,764 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-20 05:22:28] 2025-04-20 09:22:16,764 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-20 05:22:28] 2025-04-20 09:22:16,765 | INFO     | job 6608566497 has completed (purged errors)
[2025-04-20 05:22:28] 2025-04-20 09:22:16,765 | INFO     | overall cleanup function is called
[2025-04-20 05:22:28] 2025-04-20 09:22:17,770 | INFO     | --- collectZombieJob: --- 10, [26766]
[2025-04-20 05:22:28] 2025-04-20 09:22:17,771 | INFO     | zombie collector waiting for pid 26766
[2025-04-20 05:22:28] 2025-04-20 09:22:17,771 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-20 05:22:28] 2025-04-20 09:22:17,771 | INFO     | collected zombie processes
[2025-04-20 05:22:28] 2025-04-20 09:22:17,771 | INFO     | will attempt to kill all subprocesses of pid=26766
[2025-04-20 05:22:28] 2025-04-20 09:22:17,861 | INFO     | process IDs to be killed: [26766] (in reverse order)
[2025-04-20 05:22:28] 2025-04-20 09:22:17,916 | WARNING  | found no corresponding commands to process id(s)
[2025-04-20 05:22:28] 2025-04-20 09:22:17,917 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-20 05:22:28] 2025-04-20 09:22:17,921 | INFO     | did not find any defunct processes belonging to 26766
[2025-04-20 05:22:28] 2025-04-20 09:22:17,924 | INFO     | did not find any defunct processes belonging to 26766
[2025-04-20 05:22:28] 2025-04-20 09:22:17,924 | INFO     | ready for new job
[2025-04-20 05:22:28] 2025-04-20 09:22:17,925 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-20 05:22:28] 2025-04-20 09:22:17,926 | INFO     | **************************************
[2025-04-20 05:22:28] 2025-04-20 09:22:17,926 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-20 05:22:28] 2025-04-20 09:22:17,927 | INFO     | **************************************
[2025-04-20 05:22:28] 2025-04-20 09:22:17,927 | INFO     | 
[2025-04-20 05:22:28] 2025-04-20 09:22:17,927 | INFO     | architecture information:
[2025-04-20 05:22:28] 2025-04-20 09:22:17,928 | INFO     | executing command: cat /etc/os-release
[2025-04-20 05:22:28] 2025-04-20 09:22:17,947 | INFO     | cat /etc/os-release:
[2025-04-20 05:22:28] NAME="CentOS Linux"
[2025-04-20 05:22:28] VERSION="7 (Core)"
[2025-04-20 05:22:28] ID="centos"
[2025-04-20 05:22:28] ID_LIKE="rhel fedora"
[2025-04-20 05:22:28] VERSION_ID="7"
[2025-04-20 05:22:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-20 05:22:28] ANSI_COLOR="0;31"
[2025-04-20 05:22:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-20 05:22:28] HOME_URL="https://www.centos.org/"
[2025-04-20 05:22:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-20 05:22:28] 
[2025-04-20 05:22:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-20 05:22:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-20 05:22:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-20 05:22:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-20 05:22:28] 
[2025-04-20 05:22:28] 2025-04-20 09:22:17,947 | INFO     | **************************************
[2025-04-20 05:22:28] 2025-04-20 09:22:18,450 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-20 05:22:28] 2025-04-20 09:22:18,470 | INFO     | sufficient remaining disk space (18584961024 B)
[2025-04-20 05:22:28] 2025-04-20 09:22:18,470 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-20 05:22:28] 2025-04-20 09:22:18,471 | INFO     | current server update state: UPDATING_FINAL
[2025-04-20 05:22:28] 2025-04-20 09:22:18,471 | INFO     | update_server=False
[2025-04-20 05:22:28] 2025-04-20 09:22:18,471 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-20 05:22:28] 2025-04-20 09:22:18,472 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-20 05:22:28] 2025-04-20 09:22:18,472 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-20 05:22:28] 2025-04-20 09:22:18,473 | INFO     | found 0 job(s) in 20 queues
[2025-04-20 05:22:28] 2025-04-20 09:22:18,473 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-20 05:22:28] 2025-04-20 09:22:18,473 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-20 05:22:28] 2025-04-20 09:22:19,177 | INFO     | all data control threads have been joined
[2025-04-20 05:22:28] 2025-04-20 09:22:19,374 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-20 05:22:28] 2025-04-20 09:22:19,375 | INFO     | aborting loop
[2025-04-20 05:22:28] 2025-04-20 09:22:19,477 | INFO     | [job] retrieve thread has finished
[2025-04-20 05:22:28] 2025-04-20 09:22:19,588 | INFO     | [job] create_data_payload thread has finished
[2025-04-20 05:22:28] 2025-04-20 09:22:19,666 | INFO     | [payload] validate_post thread has finished
[2025-04-20 05:22:28] 2025-04-20 09:22:19,759 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-20 05:22:28] 2025-04-20 09:22:19,898 | INFO     | all payload control threads have been joined
[2025-04-20 05:22:28] 2025-04-20 09:22:19,900 | INFO     | [payload] validate_pre thread has finished
[2025-04-20 05:22:28] 2025-04-20 09:22:20,100 | INFO     | all job control threads have been joined
[2025-04-20 05:22:28] 2025-04-20 09:22:20,115 | INFO     | [payload] execute_payloads thread has finished
[2025-04-20 05:22:28] 2025-04-20 09:22:20,183 | INFO     | [data] control thread has finished
[2025-04-20 05:22:28] 2025-04-20 09:22:20,229 | INFO     | [data] copytool_in thread has finished
[2025-04-20 05:22:28] 2025-04-20 09:22:20,379 | INFO     | [job] job monitor thread has finished
[2025-04-20 05:22:28] 2025-04-20 09:22:20,724 | INFO     | [payload] failed_post thread has finished
[2025-04-20 05:22:28] 2025-04-20 09:22:20,780 | INFO     | [job] validate thread has finished
[2025-04-20 05:22:28] 2025-04-20 09:22:20,902 | INFO     | [payload] control thread has finished
[2025-04-20 05:22:28] 2025-04-20 09:22:20,928 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-20 05:22:28] 2025-04-20 09:22:21,103 | INFO     | [job] control thread has finished
[2025-04-20 05:22:28] 2025-04-20 09:22:21,438 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-20 05:22:28] 2025-04-20 09:22:21,764 | INFO     | [data] copytool_out thread has finished
[2025-04-20 05:22:28] 2025-04-20 09:22:22,444 | INFO     | [job] queue monitor thread has finished
[2025-04-20 05:22:28] 2025-04-20 09:22:22,478 | INFO     | [data] queue_monitor thread has finished
[2025-04-20 05:22:28] 2025-04-20 09:22:23,398 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140278989207360)>', '<ExcThread(monitor, started 140277591308032)>']
[2025-04-20 05:22:28] 2025-04-20 09:22:23,490 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-20 05:22:28] 2025-04-20 09:22:23,491 | INFO     | [monitor] control thread has ended
[2025-04-20 05:22:28] 2025-04-20 09:22:28,403 | INFO     | all workflow threads have been joined
[2025-04-20 05:22:28] 2025-04-20 09:22:28,404 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-20 05:22:28] 2025-04-20 09:22:28,404 | INFO     | traces error code: 0
[2025-04-20 05:22:28] 2025-04-20 09:22:28,404 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-20 05:22:28] 2025-04-20 09:22:28,507 [wrapper] ==== pilot stdout END ====
[2025-04-20 05:22:28] 2025-04-20 09:22:28,512 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-20 05:22:28] 2025-04-20 09:22:28,516 [wrapper] pilotpid: 20373
[2025-04-20 05:22:28] 2025-04-20 09:22:28,521 [wrapper] Pilot exit status: 0
[2025-04-20 05:22:28] 2025-04-20 09:22:28,540 [wrapper] pandaids: 6608566497
[2025-04-20 05:22:28] 2025-04-20 09:22:28,584 [wrapper] cleanup supervisor_pilot  4502 20374
[2025-04-20 05:22:28] 2025-04-20 09:22:28,589 [wrapper] Test setup, not cleaning
[2025-04-20 05:22:28] 2025-04-20 09:22:28,594 [wrapper] apfmon messages muted
[2025-04-20 05:22:28] 2025-04-20 09:22:28,599 [wrapper] ==== wrapper stdout END ====
[2025-04-20 05:22:28] 2025-04-20 09:22:28,603 [wrapper] ==== wrapper stderr END ====
[2025-04-20 05:22:28]  *** Error codes and diagnostics ***
[2025-04-20 05:22:28]     "exeErrorCode": 0,
[2025-04-20 05:22:28]     "exeErrorDiag": "",
[2025-04-20 05:22:28]     "pilotErrorCode": 0,
[2025-04-20 05:22:28]     "pilotErrorDiag": "",
[2025-04-20 05:22:28]  *** Listing of results directory ***
[2025-04-20 05:22:28] total 418208
[2025-04-20 05:22:28] -rw-r--r-- 1 boincer umatlas    495897 Apr 19 23:40 pilot3.tar.gz
[2025-04-20 05:22:28] -rwx------ 1 boincer umatlas     37140 Apr 19 23:52 runpilot2-wrapper.sh
[2025-04-20 05:22:28] -rw-r--r-- 1 boincer umatlas      5111 Apr 19 23:52 queuedata.json
[2025-04-20 05:22:28] -rw-r--r-- 1 boincer umatlas       100 Apr 20 03:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-20 05:22:28] -rwxr-xr-x 1 boincer umatlas      7986 Apr 20 03:09 run_atlas
[2025-04-20 05:22:28] -rw-r--r-- 1 boincer umatlas       105 Apr 20 03:09 job.xml
[2025-04-20 05:22:28] -rw-r--r-- 2 boincer umatlas 223746955 Apr 20 03:09 EVNT.44075481._003608.pool.root.1
[2025-04-20 05:22:28] -rw-r--r-- 2 boincer umatlas     17569 Apr 20 03:09 start_atlas.sh
[2025-04-20 05:22:28] drwxrwx--x 2 boincer umatlas      4096 Apr 20 03:09 shared
[2025-04-20 05:22:28] -rw-r--r-- 2 boincer umatlas    508885 Apr 20 03:09 input.tar.gz
[2025-04-20 05:22:28] -rw-r--r-- 1 boincer umatlas         0 Apr 20 03:09 boinc_lockfile
[2025-04-20 05:22:28] -rw-r--r-- 1 boincer umatlas      2578 Apr 20 03:09 pandaJob.out
[2025-04-20 05:22:28] -rw------- 1 boincer umatlas       462 Apr 20 03:09 setup.sh.local
[2025-04-20 05:22:28] -rw------- 1 boincer umatlas    991292 Apr 20 03:10 agis_schedconf.cvmfs.json
[2025-04-20 05:22:28] -rw------- 1 boincer umatlas   1618536 Apr 20 03:10 agis_ddmendpoints.agis.ALL.json
[2025-04-20 05:22:28] drwx------ 4 boincer umatlas      4096 Apr 20 03:10 pilot3
[2025-04-20 05:22:28] -rw-r--r-- 1 boincer umatlas      5905 Apr 20 05:20 init_data.xml
[2025-04-20 05:22:28] -rw------- 1 boincer umatlas 198500969 Apr 20 05:21 HITS.44075483._092229.pool.root.1
[2025-04-20 05:22:28] -rw-r--r-- 1 boincer umatlas       529 Apr 20 05:21 boinc_task_state.xml
[2025-04-20 05:22:28] -rw------- 1 boincer umatlas        95 Apr 20 05:21 pilot_heartbeat.json
[2025-04-20 05:22:28] -rw------- 1 boincer umatlas      1051 Apr 20 05:22 memory_monitor_summary.json
[2025-04-20 05:22:28] -rw------- 1 boincer umatlas    341558 Apr 20 05:22 log.44075483._092229.job.log.tgz.1
[2025-04-20 05:22:28] -rw------- 1 boincer umatlas      7753 Apr 20 05:22 heartbeat.json
[2025-04-20 05:22:28] -rw-r--r-- 1 boincer umatlas        27 Apr 20 05:22 wrapper_checkpoint.txt
[2025-04-20 05:22:28] -rw-r--r-- 1 boincer umatlas      8192 Apr 20 05:22 boinc_mmap_file
[2025-04-20 05:22:28] -rw------- 1 boincer umatlas      4476 Apr 20 05:22 pilotlog.txt
[2025-04-20 05:22:28] -rw------- 1 boincer umatlas    724569 Apr 20 05:22 log.44075483._092229.job.log.1
[2025-04-20 05:22:28] -rw------- 1 boincer umatlas       357 Apr 20 05:22 output.list
[2025-04-20 05:22:28] -rw-r--r-- 1 boincer umatlas       620 Apr 20 05:22 runtime_log
[2025-04-20 05:22:28] -rw------- 1 boincer umatlas   1085440 Apr 20 05:22 result.tar.gz
[2025-04-20 05:22:28] -rw------- 1 boincer umatlas       659 Apr 20 05:22 w96LDmWuaQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm9ajLDmgeXMSn.diag
[2025-04-20 05:22:28] -rw-r--r-- 1 boincer umatlas     11388 Apr 20 05:22 runtime_log.err
[2025-04-20 05:22:28] -rw-r--r-- 1 boincer umatlas     21141 Apr 20 05:22 stderr.txt
[2025-04-20 05:22:28] HITS file was successfully produced:
[2025-04-20 05:22:28] -rw------- 1 boincer umatlas 198500969 Apr 20 05:21 shared/HITS.pool.root.1
[2025-04-20 05:22:28]  *** Contents of shared directory: ***
[2025-04-20 05:22:28] total 413940
[2025-04-20 05:22:28] -rw-r--r-- 2 boincer umatlas 223746955 Apr 20 03:09 ATLAS.root_0
[2025-04-20 05:22:28] -rw-r--r-- 2 boincer umatlas     17569 Apr 20 03:09 start_atlas.sh
[2025-04-20 05:22:28] -rw-r--r-- 2 boincer umatlas    508885 Apr 20 03:09 input.tar.gz
[2025-04-20 05:22:28] -rw------- 1 boincer umatlas 198500969 Apr 20 05:21 HITS.pool.root.1
[2025-04-20 05:22:28] -rw------- 1 boincer umatlas   1085440 Apr 20 05:22 result.tar.gz
05:22:30 (16534): run_atlas exited; CPU time 56827.322043
05:22:30 (16534): called boinc_finish(0)

</stderr_txt>
]]>

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