Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:35:04 (1907189): wrapper (7.7.26015): starting
02:35:04 (1907189): wrapper: running run_atlas (--nthreads 9)
[2025-04-20 02:35:04] Arguments: --nthreads 9
[2025-04-20 02:35:04] Threads: 9
[2025-04-20 02:35:04] Checking for CVMFS
[2025-04-20 02:35:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-20 02:35:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-20 02:35:05] Running cvmfs_config stat atlas.cern.ch
[2025-04-20 02:35:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-20 02:35:05] 2.12.6.0 1358637 38453 226628 145066 2 139 30295042 32935937 10002 130560 0 66850709 99.492 95792214 29059 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-20 02:35:05] CVMFS is ok
[2025-04-20 02:35:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-20 02:35:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-20 02:35:05] Further information can be found at the LHC@home message board.
[2025-04-20 02:35:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-20 02:35:05] Checking for apptainer binary...
[2025-04-20 02:35:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-20 02:35:05] Running /usr/bin/apptainer --version
[2025-04-20 02:35:05] apptainer version 1.4.0-1.el9
[2025-04-20 02:35:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-20 02:35:06] c6-2-29-3.aglt2.org
[2025-04-20 02:35:06] apptainer works
[2025-04-20 02:35:06] Set ATHENA_PROC_NUMBER=9
[2025-04-20 02:35:06] Set ATHENA_CORE_NUMBER=9
[2025-04-20 02:35:06] Starting ATLAS job with PandaID=6608356847
[2025-04-20 02:35:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-20 04:58:42]  *** The last 200 lines of the pilot log: ***
[2025-04-20 04:58:42] 2025-04-20 08:58:26,245 | INFO     | intersect: -98873005574.20241
[2025-04-20 04:58:42] 2025-04-20 08:58:26,245 | INFO     | chi2: 5.164446975417275
[2025-04-20 04:58:42] 2025-04-20 08:58:26,246 | INFO     | sum of square deviations: 762920299.2592596
[2025-04-20 04:58:42] 2025-04-20 08:58:26,246 | INFO     | sum of deviations: 54718538808.18517
[2025-04-20 04:58:42] 2025-04-20 08:58:26,246 | INFO     | mean x: 1745135072.074074
[2025-04-20 04:58:42] 2025-04-20 08:58:26,246 | INFO     | mean y: 2280138.6814814815
[2025-04-20 04:58:42] 2025-04-20 08:58:26,246 | INFO     | -- intersect: -125163141805.81958
[2025-04-20 04:58:42] 2025-04-20 08:58:26,247 | INFO     | intersect: -125163141805.81958
[2025-04-20 04:58:42] 2025-04-20 08:58:26,247 | INFO     | chi2: 4.449077757828347
[2025-04-20 04:58:42] 2025-04-20 08:58:26,247 | INFO     | current chi2=4.449077757828347 (change=13.851806805144475 %)
[2025-04-20 04:58:42] 2025-04-20 08:58:26,247 | INFO     | right removable region: 134
[2025-04-20 04:58:42] 2025-04-20 08:58:26,247 | INFO     | sum of square deviations: 762914199.2592596
[2025-04-20 04:58:42] 2025-04-20 08:58:26,248 | INFO     | sum of deviations: 17085146769.296284
[2025-04-20 04:58:42] 2025-04-20 08:58:26,248 | INFO     | mean x: 1745135377.074074
[2025-04-20 04:58:42] 2025-04-20 08:58:26,248 | INFO     | mean y: 2322979.5703703705
[2025-04-20 04:58:42] 2025-04-20 08:58:26,248 | INFO     | -- intersect: -39079259298.687225
[2025-04-20 04:58:42] 2025-04-20 08:58:26,248 | INFO     | intersect: -39079259298.687225
[2025-04-20 04:58:42] 2025-04-20 08:58:26,248 | INFO     | chi2: 2.690678403981821
[2025-04-20 04:58:42] 2025-04-20 08:58:26,248 | INFO     | current chi2=2.690678403981821 (change=47.89997037844656 %)
[2025-04-20 04:58:42] 2025-04-20 08:58:26,249 | INFO     | sum of square deviations: 681244501.7307714
[2025-04-20 04:58:42] 2025-04-20 08:58:26,249 | INFO     | sum of deviations: -2978288461.1538534
[2025-04-20 04:58:42] 2025-04-20 08:58:26,249 | INFO     | mean x: 1745135529.5769231
[2025-04-20 04:58:42] 2025-04-20 08:58:26,249 | INFO     | mean y: 2360447.4153846153
[2025-04-20 04:58:42] 2025-04-20 08:58:26,249 | INFO     | -- intersect: 7631804791.822928
[2025-04-20 04:58:42] 2025-04-20 08:58:26,250 | INFO     | intersect: 7631804791.822928
[2025-04-20 04:58:42] 2025-04-20 08:58:26,250 | INFO     | chi2: 1.7177033288569397
[2025-04-20 04:58:42] 2025-04-20 08:58:26,250 | INFO     | current chi2=1.7177033288569397 (change=36.160957537140696 %)
[2025-04-20 04:58:42] 2025-04-20 08:58:26,250 | INFO     | sum of square deviations: 605621429.2
[2025-04-20 04:58:42] 2025-04-20 08:58:26,251 | INFO     | sum of deviations: -19772693764.68
[2025-04-20 04:58:42] 2025-04-20 08:58:26,251 | INFO     | mean x: 1745135682.08
[2025-04-20 04:58:42] 2025-04-20 08:58:26,251 | INFO     | mean y: 2394154.368
[2025-04-20 04:58:42] 2025-04-20 08:58:26,251 | INFO     | -- intersect: 56978636664.75074
[2025-04-20 04:58:42] 2025-04-20 08:58:26,251 | INFO     | intersect: 56978636664.75074
[2025-04-20 04:58:42] 2025-04-20 08:58:26,251 | INFO     | chi2: 0.9336064845572731
[2025-04-20 04:58:42] 2025-04-20 08:58:26,251 | INFO     | current chi2=0.9336064845572731 (change=45.647978386433614 %)
[2025-04-20 04:58:42] 2025-04-20 08:58:26,251 | INFO     | sum of square deviations: 535812419.16666526
[2025-04-20 04:58:42] 2025-04-20 08:58:26,252 | INFO     | sum of deviations: -20093713332.916664
[2025-04-20 04:58:42] 2025-04-20 08:58:26,252 | INFO     | mean x: 1745135834.5833333
[2025-04-20 04:58:42] 2025-04-20 08:58:26,252 | INFO     | mean y: 2394620.2416666667
[2025-04-20 04:58:42] 2025-04-20 08:58:26,252 | INFO     | -- intersect: 65447423389.18172
[2025-04-20 04:58:42] 2025-04-20 08:58:26,252 | INFO     | intersect: 65447423389.18172
[2025-04-20 04:58:42] 2025-04-20 08:58:26,252 | INFO     | chi2: 0.8686201854178409
[2025-04-20 04:58:42] 2025-04-20 08:58:26,252 | INFO     | current chi2=0.8686201854178409 (change=6.960780608786095 %)
[2025-04-20 04:58:42] 2025-04-20 08:58:26,252 | INFO     | left removable region: 40
[2025-04-20 04:58:42] 2025-04-20 08:58:26,253 | INFO     | sum of square deviations: 257538196.43617037
[2025-04-20 04:58:42] 2025-04-20 08:58:26,253 | INFO     | sum of deviations: 1132846153.9148934
[2025-04-20 04:58:42] 2025-04-20 08:58:26,253 | INFO     | mean x: 1745136261.606383
[2025-04-20 04:58:42] 2025-04-20 08:58:26,253 | INFO     | mean y: 2374413.8085106383
[2025-04-20 04:58:42] 2025-04-20 08:58:26,253 | INFO     | -- intersect: -7674043800.559894
[2025-04-20 04:58:42] 2025-04-20 08:58:26,253 | INFO     | intersect: -7674043800.559894
[2025-04-20 04:58:42] 2025-04-20 08:58:26,254 | INFO     | chi2: 0.017550119370787026
[2025-04-20 04:58:42] 2025-04-20 08:58:26,254 | INFO     | -- intersect: -7674043800.559894
[2025-04-20 04:58:42] 2025-04-20 08:58:26,254 | INFO     | current memory leak: 4.40 B/s (using 94 data points, chi2=0.02)
[2025-04-20 04:58:42] 2025-04-20 08:58:26,254 | INFO     | ..............................
[2025-04-20 04:58:42] 2025-04-20 08:58:26,254 | INFO     | . Timing measurements:
[2025-04-20 04:58:42] 2025-04-20 08:58:26,254 | INFO     | . get job = 0 s
[2025-04-20 04:58:42] 2025-04-20 08:58:26,255 | INFO     | . initial setup = 3 s
[2025-04-20 04:58:42] 2025-04-20 08:58:26,255 | INFO     | . payload setup = 14 s
[2025-04-20 04:58:42] 2025-04-20 08:58:26,255 | INFO     | . stage-in = 0 s
[2025-04-20 04:58:42] 2025-04-20 08:58:26,255 | INFO     | . payload execution = 8525 s
[2025-04-20 04:58:42] 2025-04-20 08:58:26,255 | INFO     | . stage-out = 2 s
[2025-04-20 04:58:42] 2025-04-20 08:58:26,255 | INFO     | . log creation = 0 s
[2025-04-20 04:58:42] 2025-04-20 08:58:26,255 | INFO     | ..............................
[2025-04-20 04:58:42] 2025-04-20 08:58:26,773 | INFO     | 
[2025-04-20 04:58:42] 2025-04-20 08:58:26,773 | INFO     | job summary report
[2025-04-20 04:58:42] 2025-04-20 08:58:26,773 | INFO     | --------------------------------------------------
[2025-04-20 04:58:42] 2025-04-20 08:58:26,773 | INFO     | PanDA job id: 6608356847
[2025-04-20 04:58:42] 2025-04-20 08:58:26,773 | INFO     | task id: 44075483
[2025-04-20 04:58:42] 2025-04-20 08:58:26,773 | INFO     | errors: (none)
[2025-04-20 04:58:42] 2025-04-20 08:58:26,773 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-20 04:58:42] 2025-04-20 08:58:26,773 | INFO     | pilot state: finished 
[2025-04-20 04:58:42] 2025-04-20 08:58:26,773 | INFO     | transexitcode: 0
[2025-04-20 04:58:42] 2025-04-20 08:58:26,773 | INFO     | exeerrorcode: 0
[2025-04-20 04:58:42] 2025-04-20 08:58:26,774 | INFO     | exeerrordiag: 
[2025-04-20 04:58:42] 2025-04-20 08:58:26,774 | INFO     | exitcode: 0
[2025-04-20 04:58:42] 2025-04-20 08:58:26,774 | INFO     | exitmsg: OK
[2025-04-20 04:58:42] 2025-04-20 08:58:26,774 | INFO     | cpuconsumptiontime: 39004 s
[2025-04-20 04:58:42] 2025-04-20 08:58:26,774 | INFO     | nevents: 400
[2025-04-20 04:58:42] 2025-04-20 08:58:26,774 | INFO     | neventsw: 0
[2025-04-20 04:58:42] 2025-04-20 08:58:26,774 | INFO     | pid: 1920692
[2025-04-20 04:58:42] 2025-04-20 08:58:26,774 | INFO     | pgrp: 1920692
[2025-04-20 04:58:42] 2025-04-20 08:58:26,774 | INFO     | corecount: 9
[2025-04-20 04:58:42] 2025-04-20 08:58:26,774 | INFO     | event service: False
[2025-04-20 04:58:42] 2025-04-20 08:58:26,774 | INFO     | sizes: {0: 2426652, 1: 2426851, 11: 2427057, 12: 2427085, 8542: 2455289, 8544: 2464230, 8545: 2464414, 8552: 2464584}
[2025-04-20 04:58:42] 2025-04-20 08:58:26,774 | INFO     | --------------------------------------------------
[2025-04-20 04:58:42] 2025-04-20 08:58:26,774 | INFO     | 
[2025-04-20 04:58:42] 2025-04-20 08:58:26,774 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-20 04:58:42] 2025-04-20 08:58:26,793 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-20 04:58:42] 2025-04-20 08:58:26,793 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-20 04:58:42] 2025-04-20 08:58:26,793 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-20 04:58:42] 2025-04-20 08:58:26,793 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-20 04:58:42] 2025-04-20 08:58:26,793 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-20 04:58:42] 2025-04-20 08:58:26,793 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-20 04:58:42] 2025-04-20 08:58:26,794 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-20 04:58:42] 2025-04-20 08:58:26,794 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-20 04:58:42] 2025-04-20 08:58:26,794 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-20 04:58:42] 2025-04-20 08:58:26,794 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-20 04:58:42] 2025-04-20 08:58:26,794 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-20 04:58:42] 2025-04-20 08:58:26,794 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-20 04:58:42] 2025-04-20 08:58:26,794 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-20 04:58:42] 2025-04-20 08:58:26,794 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-20 04:58:42] 2025-04-20 08:58:26,794 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-20 04:58:42] 2025-04-20 08:58:26,794 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-20 04:58:42] 2025-04-20 08:58:26,794 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-20 04:58:42] 2025-04-20 08:58:26,794 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-20 04:58:42] 2025-04-20 08:58:26,794 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-20 04:58:42] 2025-04-20 08:58:26,794 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-20 04:58:42] 2025-04-20 08:58:26,795 | INFO     | job 6608356847 has completed (purged errors)
[2025-04-20 04:58:42] 2025-04-20 08:58:26,795 | INFO     | overall cleanup function is called
[2025-04-20 04:58:42] 2025-04-20 08:58:27,802 | INFO     | --- collectZombieJob: --- 10, [1920692]
[2025-04-20 04:58:42] 2025-04-20 08:58:27,802 | INFO     | zombie collector waiting for pid 1920692
[2025-04-20 04:58:42] 2025-04-20 08:58:27,802 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-20 04:58:42] 2025-04-20 08:58:27,802 | INFO     | collected zombie processes
[2025-04-20 04:58:42] 2025-04-20 08:58:27,802 | INFO     | will attempt to kill all subprocesses of pid=1920692
[2025-04-20 04:58:42] 2025-04-20 08:58:28,305 | INFO     | PID=1911906 has CPU usage=12.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-04-20 04:58:42] 2025-04-20 08:58:28,306 | INFO     | .. there are 17 such processes running
[2025-04-20 04:58:42] 2025-04-20 08:58:28,375 | INFO     | process IDs to be killed: [1920692] (in reverse order)
[2025-04-20 04:58:42] 2025-04-20 08:58:28,452 | WARNING  | found no corresponding commands to process id(s)
[2025-04-20 04:58:42] 2025-04-20 08:58:28,453 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-20 04:58:42] 2025-04-20 08:58:28,464 | INFO     | did not find any defunct processes belonging to 1920692
[2025-04-20 04:58:42] 2025-04-20 08:58:28,475 | INFO     | did not find any defunct processes belonging to 1920692
[2025-04-20 04:58:42] 2025-04-20 08:58:28,476 | INFO     | ready for new job
[2025-04-20 04:58:42] 2025-04-20 08:58:28,476 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-20 04:58:42] 2025-04-20 08:58:28,478 | INFO     | **************************************
[2025-04-20 04:58:42] 2025-04-20 08:58:28,478 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-20 04:58:42] 2025-04-20 08:58:28,478 | INFO     | **************************************
[2025-04-20 04:58:42] 2025-04-20 08:58:28,478 | INFO     | 
[2025-04-20 04:58:42] 2025-04-20 08:58:28,496 | INFO     | architecture information:
[2025-04-20 04:58:42] 2025-04-20 08:58:28,497 | INFO     | executing command: cat /etc/os-release
[2025-04-20 04:58:42] 2025-04-20 08:58:28,510 | INFO     | cat /etc/os-release:
[2025-04-20 04:58:42] NAME="CentOS Linux"
[2025-04-20 04:58:42] VERSION="7 (Core)"
[2025-04-20 04:58:42] ID="centos"
[2025-04-20 04:58:42] ID_LIKE="rhel fedora"
[2025-04-20 04:58:42] VERSION_ID="7"
[2025-04-20 04:58:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-20 04:58:42] ANSI_COLOR="0;31"
[2025-04-20 04:58:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-20 04:58:42] HOME_URL="https://www.centos.org/"
[2025-04-20 04:58:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-20 04:58:42] 
[2025-04-20 04:58:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-20 04:58:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-20 04:58:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-20 04:58:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-20 04:58:42] 
[2025-04-20 04:58:42] 2025-04-20 08:58:28,511 | INFO     | **************************************
[2025-04-20 04:58:42] 2025-04-20 08:58:29,014 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-20 04:58:42] 2025-04-20 08:58:29,029 | INFO     | sufficient remaining disk space (75160879104 B)
[2025-04-20 04:58:42] 2025-04-20 08:58:29,029 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-20 04:58:42] 2025-04-20 08:58:29,029 | INFO     | current server update state: UPDATING_FINAL
[2025-04-20 04:58:42] 2025-04-20 08:58:29,029 | INFO     | update_server=False
[2025-04-20 04:58:42] 2025-04-20 08:58:29,029 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-20 04:58:42] 2025-04-20 08:58:29,030 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-20 04:58:42] 2025-04-20 08:58:29,030 | INFO     | found 0 job(s) in 20 queues
[2025-04-20 04:58:42] 2025-04-20 08:58:29,030 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-20 04:58:42] 2025-04-20 08:58:29,030 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-20 04:58:42] 2025-04-20 08:58:29,126 | INFO     | all job control threads have been joined
[2025-04-20 04:58:42] 2025-04-20 08:58:29,199 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-20 04:58:42] 2025-04-20 08:58:29,199 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-20 04:58:42] 2025-04-20 08:58:29,200 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-20 04:58:42] 2025-04-20 08:58:29,200 | INFO     | will abort loop
[2025-04-20 04:58:42] 2025-04-20 08:58:29,264 | INFO     | all payload control threads have been joined
[2025-04-20 04:58:42] 2025-04-20 08:58:29,355 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-20 04:58:42] 2025-04-20 08:58:29,881 | INFO     | all data control threads have been joined
[2025-04-20 04:58:42] 2025-04-20 08:58:30,034 | INFO     | [job] retrieve thread has finished
[2025-04-20 04:58:42] 2025-04-20 08:58:30,131 | INFO     | [job] control thread has finished
[2025-04-20 04:58:42] 2025-04-20 08:58:30,205 | INFO     | [job] job monitor thread has finished
[2025-04-20 04:58:42] 2025-04-20 08:58:30,228 | INFO     | [job] validate thread has finished
[2025-04-20 04:58:42] 2025-04-20 08:58:30,229 | INFO     | [payload] validate_pre thread has finished
[2025-04-20 04:58:42] 2025-04-20 08:58:30,261 | INFO     | [payload] failed_post thread has finished
[2025-04-20 04:58:42] 2025-04-20 08:58:30,269 | INFO     | [payload] control thread has finished
[2025-04-20 04:58:42] 2025-04-20 08:58:30,460 | INFO     | [job] create_data_payload thread has finished
[2025-04-20 04:58:42] 2025-04-20 08:58:30,463 | INFO     | [data] copytool_in thread has finished
[2025-04-20 04:58:42] 2025-04-20 08:58:30,495 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-20 04:58:42] 2025-04-20 08:58:30,506 | INFO     | [payload] validate_post thread has finished
[2025-04-20 04:58:42] 2025-04-20 08:58:30,751 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-20 04:58:42] 2025-04-20 08:58:30,884 | INFO     | [data] control thread has finished
[2025-04-20 04:58:42] 2025-04-20 08:58:30,966 | INFO     | [payload] execute_payloads thread has finished
[2025-04-20 04:58:42] 2025-04-20 08:58:31,355 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-20 04:58:42] 2025-04-20 08:58:31,360 | INFO     | [data] copytool_out thread has finished
[2025-04-20 04:58:42] 2025-04-20 08:58:32,361 | INFO     | [job] queue monitor thread has finished
[2025-04-20 04:58:42] 2025-04-20 08:58:34,757 | INFO     | [data] queue_monitor thread has finished
[2025-04-20 04:58:42] 2025-04-20 08:58:36,336 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139648189351744)>', '<ExcThread(monitor, started 139647690725120)>']
[2025-04-20 04:58:42] 2025-04-20 08:58:37,069 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-20 04:58:42] 2025-04-20 08:58:37,069 | INFO     | [monitor] control thread has ended
[2025-04-20 04:58:42] 2025-04-20 08:58:41,361 | INFO     | all workflow threads have been joined
[2025-04-20 04:58:42] 2025-04-20 08:58:41,362 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-20 04:58:42] 2025-04-20 08:58:41,362 | INFO     | traces error code: 0
[2025-04-20 04:58:42] 2025-04-20 08:58:41,363 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-20 04:58:42] 2025-04-20 08:58:41,621 [wrapper] ==== pilot stdout END ====
[2025-04-20 04:58:42] 2025-04-20 08:58:41,625 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-20 04:58:42] 2025-04-20 08:58:41,628 [wrapper] pilotpid: 1911906
[2025-04-20 04:58:42] 2025-04-20 08:58:41,633 [wrapper] Pilot exit status: 0
[2025-04-20 04:58:42] 2025-04-20 08:58:41,650 [wrapper] pandaids: 6608356847
[2025-04-20 04:58:42] 2025-04-20 08:58:41,726 [wrapper] cleanup supervisor_pilot 2478947 1911907
[2025-04-20 04:58:42] 2025-04-20 08:58:41,730 [wrapper] Test setup, not cleaning
[2025-04-20 04:58:42] 2025-04-20 08:58:41,735 [wrapper] apfmon messages muted
[2025-04-20 04:58:42] 2025-04-20 08:58:41,758 [wrapper] ==== wrapper stdout END ====
[2025-04-20 04:58:42] 2025-04-20 08:58:41,763 [wrapper] ==== wrapper stderr END ====
[2025-04-20 04:58:42]  *** Error codes and diagnostics ***
[2025-04-20 04:58:42]     "exeErrorCode": 0,
[2025-04-20 04:58:42]     "exeErrorDiag": "",
[2025-04-20 04:58:42]     "pilotErrorCode": 0,
[2025-04-20 04:58:42]     "pilotErrorDiag": "",
[2025-04-20 04:58:42]  *** Listing of results directory ***
[2025-04-20 04:58:42] total 416488
[2025-04-20 04:58:42] -rw-r--r--. 1 boincer umatlas    495897 Apr 19 19:35 pilot3.tar.gz
[2025-04-20 04:58:42] -rwx------. 1 boincer umatlas     37140 Apr 19 20:05 runpilot2-wrapper.sh
[2025-04-20 04:58:42] -rw-r--r--. 1 boincer umatlas      5111 Apr 19 20:05 queuedata.json
[2025-04-20 04:58:42] -rw-r--r--. 1 boincer umatlas       100 Apr 20 02:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-20 04:58:42] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 20 02:35 run_atlas
[2025-04-20 04:58:42] -rw-r--r--. 1 boincer umatlas       105 Apr 20 02:35 job.xml
[2025-04-20 04:58:42] -rw-r--r--. 2 boincer umatlas 226223766 Apr 20 02:35 EVNT.44075481._003502.pool.root.1
[2025-04-20 04:58:42] -rw-r--r--. 2 boincer umatlas     17569 Apr 20 02:35 start_atlas.sh
[2025-04-20 04:58:42] drwxrwx--x. 2 boincer umatlas      4096 Apr 20 02:35 shared
[2025-04-20 04:58:42] -rw-r--r--. 2 boincer umatlas    508891 Apr 20 02:35 input.tar.gz
[2025-04-20 04:58:42] -rw-r--r--. 1 boincer umatlas         0 Apr 20 02:35 boinc_lockfile
[2025-04-20 04:58:42] -rw-r--r--. 1 boincer umatlas      2578 Apr 20 02:35 pandaJob.out
[2025-04-20 04:58:42] -rw-------. 1 boincer umatlas       467 Apr 20 02:35 setup.sh.local
[2025-04-20 04:58:42] -rw-------. 1 boincer umatlas    991292 Apr 20 02:35 agis_schedconf.cvmfs.json
[2025-04-20 04:58:42] -rw-------. 1 boincer umatlas   1618536 Apr 20 02:35 agis_ddmendpoints.agis.ALL.json
[2025-04-20 04:58:42] drwx------. 4 boincer umatlas      4096 Apr 20 02:35 pilot3
[2025-04-20 04:58:42] -rw-r--r--. 1 boincer umatlas      6856 Apr 20 04:57 init_data.xml
[2025-04-20 04:58:42] -rw-------. 1 boincer umatlas 194097508 Apr 20 04:57 HITS.44075483._089875.pool.root.1
[2025-04-20 04:58:42] -rw-r--r--. 1 boincer umatlas       529 Apr 20 04:57 boinc_task_state.xml
[2025-04-20 04:58:42] -rw-------. 1 boincer umatlas        95 Apr 20 04:58 pilot_heartbeat.json
[2025-04-20 04:58:42] -rw-------. 1 boincer umatlas      1056 Apr 20 04:58 memory_monitor_summary.json
[2025-04-20 04:58:42] -rw-------. 1 boincer umatlas    364215 Apr 20 04:58 log.44075483._089875.job.log.tgz.1
[2025-04-20 04:58:42] -rw-------. 1 boincer umatlas      7733 Apr 20 04:58 heartbeat.json
[2025-04-20 04:58:42] -rw-r--r--. 1 boincer umatlas      8192 Apr 20 04:58 boinc_mmap_file
[2025-04-20 04:58:42] -rw-r--r--. 1 boincer umatlas        27 Apr 20 04:58 wrapper_checkpoint.txt
[2025-04-20 04:58:42] -rw-------. 1 boincer umatlas      4662 Apr 20 04:58 pilotlog.txt
[2025-04-20 04:58:42] -rw-------. 1 boincer umatlas    785392 Apr 20 04:58 log.44075483._089875.job.log.1
[2025-04-20 04:58:42] -rw-------. 1 boincer umatlas       357 Apr 20 04:58 output.list
[2025-04-20 04:58:42] -rw-r--r--. 1 boincer umatlas       620 Apr 20 04:58 runtime_log
[2025-04-20 04:58:42] -rw-------. 1 boincer umatlas   1167360 Apr 20 04:58 result.tar.gz
[2025-04-20 04:58:42] -rw-r--r--. 1 boincer umatlas     11423 Apr 20 04:58 runtime_log.err
[2025-04-20 04:58:42] -rw-------. 1 boincer umatlas       657 Apr 20 04:58 lTmNDm2MXQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmKBjLDmGwIhMo.diag
[2025-04-20 04:58:42] -rw-r--r--. 1 boincer umatlas     21016 Apr 20 04:58 stderr.txt
[2025-04-20 04:58:42] HITS file was successfully produced:
[2025-04-20 04:58:42] -rw-------. 1 boincer umatlas 194097508 Apr 20 04:57 shared/HITS.pool.root.1
[2025-04-20 04:58:42]  *** Contents of shared directory: ***
[2025-04-20 04:58:42] total 412140
[2025-04-20 04:58:42] -rw-r--r--. 2 boincer umatlas 226223766 Apr 20 02:35 ATLAS.root_0
[2025-04-20 04:58:42] -rw-r--r--. 2 boincer umatlas     17569 Apr 20 02:35 start_atlas.sh
[2025-04-20 04:58:42] -rw-r--r--. 2 boincer umatlas    508891 Apr 20 02:35 input.tar.gz
[2025-04-20 04:58:42] -rw-------. 1 boincer umatlas 194097508 Apr 20 04:57 HITS.pool.root.1
[2025-04-20 04:58:42] -rw-------. 1 boincer umatlas   1167360 Apr 20 04:58 result.tar.gz
04:58:43 (1907189): run_atlas exited; CPU time 39200.409020
04:58:43 (1907189): called boinc_finish(0)

</stderr_txt>
]]>

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