Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:32:41 (31336): wrapper (7.7.26015): starting
02:32:41 (31336): wrapper: running run_atlas (--nthreads 12)
[2025-04-20 02:32:41] Arguments: --nthreads 12
[2025-04-20 02:32:41] Threads: 12
[2025-04-20 02:32:41] Checking for CVMFS
[2025-04-20 02:32:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-20 02:32:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-20 02:32:42] Running cvmfs_config stat atlas.cern.ch
[2025-04-20 02:32:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-20 02:32:42] 2.11.2.0 5277 370544 166384 145066 2 58 11524110 20275201 1 130560 0 25353707 99.954 8314078 52907 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-20 02:32:42] CVMFS is ok
[2025-04-20 02:32:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-20 02:32:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-20 02:32:42] Further information can be found at the LHC@home message board.
[2025-04-20 02:32:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-20 02:32:42] Checking for apptainer binary...
[2025-04-20 02:32:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-20 02:32:42] Running /usr/bin/apptainer --version
[2025-04-20 02:32:42] apptainer version 1.3.2-1.el7
[2025-04-20 02:32:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-20 02:32:43] c-205-15.aglt2.org
[2025-04-20 02:32:43] apptainer works
[2025-04-20 02:32:43] Set ATHENA_PROC_NUMBER=12
[2025-04-20 02:32:43] Set ATHENA_CORE_NUMBER=12
[2025-04-20 02:32:43] Starting ATLAS job with PandaID=6608527293
[2025-04-20 02:32:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-20 03:56:06]  *** The last 200 lines of the pilot log: ***
[2025-04-20 03:56:06]  lfn=log.44075483._091991.job.log.tgz.1
[2025-04-20 03:56:06]  mtime=0
[2025-04-20 03:56:06]  protocol_id=None
[2025-04-20 03:56:06]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-20 03:56:06]  replicas=None
[2025-04-20 03:56:06]  scope=mc23_13p6TeV
[2025-04-20 03:56:06]  status=None
[2025-04-20 03:56:06]  status_code=0
[2025-04-20 03:56:06]  storage_token=
[2025-04-20 03:56:06]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6608527293/log.44075483._091991.job.log.tgz.1
[2025-04-20 03:56:06]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/33/a6/log.44075483._091991.job.log.tgz.1
[2025-04-20 03:56:06]  workdir=None
[2025-04-20 03:56:06] ]
[2025-04-20 03:56:06] 2025-04-20 07:55:38,196 | INFO     | transferring file log.44075483._091991.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6608527293/log.44075483._091991.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-20 03:56:06] 2025-04-20 07:55:38,196 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6608527293/log.44075483._091991.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075483._091991.job
[2025-04-20 03:56:06] 2025-04-20 07:55:38,225 | INFO     | adding to output.list: log.44075483._091991.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/33/a6/log.44075483._091991.job.log.tg
[2025-04-20 03:56:06] 2025-04-20 07:55:38,226 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-20 03:56:06] 2025-04-20 07:55:38,227 | INFO     | summary of transferred files:
[2025-04-20 03:56:06] 2025-04-20 07:55:38,227 | INFO     |  -- lfn=log.44075483._091991.job.log.tgz.1, status_code=0, status=transferred
[2025-04-20 03:56:06] 2025-04-20 07:55:38,227 | INFO     | stage-out finished correctly
[2025-04-20 03:56:06] 2025-04-20 07:55:38,980 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-20 03:56:06] 2025-04-20 07:55:39,717 | INFO     | job 6608527293 has state=finished
[2025-04-20 03:56:06] 2025-04-20 07:55:39,718 | INFO     | preparing for final server update for job 6608527293 in state='finished'
[2025-04-20 03:56:06] 2025-04-20 07:55:39,784 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-04-20 03:56:06] 2025-04-20 07:55:39,784 | INFO     | this job has now completed (state=finished)
[2025-04-20 03:56:06] 2025-04-20 07:55:39,784 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-20 03:56:06] 2025-04-20 07:55:39,785 | INFO     | log transfer has been attempted: DONE
[2025-04-20 03:56:06] 2025-04-20 07:55:39,785 | INFO     | job 6608527293 has finished - writing final server update
[2025-04-20 03:56:06] 2025-04-20 07:55:39,785 | INFO     | total number of processed events: 400 (read)
[2025-04-20 03:56:06] 2025-04-20 07:55:39,788 | INFO     | executing command: lscpu
[2025-04-20 03:56:06] 2025-04-20 07:55:39,812 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-20 03:56:06] 2025-04-20 07:55:39,831 | WARNING  | process 9060 can no longer be monitored (due to stat problems) - aborting
[2025-04-20 03:56:06] 2025-04-20 07:55:39,832 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6608527293/memory_monitor_summary.json (trf name=prmon)
[2025-04-20 03:56:06] 2025-04-20 07:55:39,922 | INFO     | number of running child processes to parent process 9060: 1
[2025-04-20 03:56:06] 2025-04-20 07:55:39,922 | INFO     | maximum number of monitored processes: 6
[2025-04-20 03:56:06] 2025-04-20 07:55:42,425 | INFO     | monitor loop #370: job 0:6608527293 is in state 'finished'
[2025-04-20 03:56:06] 2025-04-20 07:55:42,425 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 03:56:06] 2025-04-20 07:55:44,216 | INFO     | PID=2643 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-04-20 03:56:06] 2025-04-20 07:55:44,928 | INFO     | monitor loop #371: job 0:6608527293 is in state 'finished'
[2025-04-20 03:56:06] 2025-04-20 07:55:44,928 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 03:56:06] 2025-04-20 07:55:45,563 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-20 03:56:06] 2025-04-20 07:55:45,564 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6608527293/memory_monitor_summary.json (trf name=prmon)
[2025-04-20 03:56:06] 2025-04-20 07:55:45,565 | INFO     | extracted standard info from prmon json
[2025-04-20 03:56:06] 2025-04-20 07:55:45,565 | INFO     | extracted standard memory fields from prmon json
[2025-04-20 03:56:06] 2025-04-20 07:55:45,565 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-20 03:56:06] 2025-04-20 07:55:45,565 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-20 03:56:06] 2025-04-20 07:55:45,566 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-20 03:56:06] 2025-04-20 07:55:45,568 | INFO     | fitting pss+swap vs Time
[2025-04-20 03:56:06] 2025-04-20 07:55:45,568 | INFO     | sum of square deviations: 125630262.5
[2025-04-20 03:56:06] 2025-04-20 07:55:45,569 | INFO     | sum of deviations: 17632605526.999996
[2025-04-20 03:56:06] 2025-04-20 07:55:45,569 | INFO     | mean x: 1745133337.5
[2025-04-20 03:56:06] 2025-04-20 07:55:45,569 | INFO     | mean y: 2620685.3513513515
[2025-04-20 03:56:06] 2025-04-20 07:55:45,569 | INFO     | -- intersect: -244932374432.99802
[2025-04-20 03:56:06] 2025-04-20 07:55:45,569 | INFO     | intersect: -244932374432.99802
[2025-04-20 03:56:06] 2025-04-20 07:55:45,569 | INFO     | chi2: 2.3391999918712645
[2025-04-20 03:56:06] 2025-04-20 07:55:45,569 | INFO     | -- intersect: -244932374432.99802
[2025-04-20 03:56:06] 2025-04-20 07:55:45,569 | INFO     | current memory leak: 140.35 B/s (using 74 data points, chi2=2.34)
[2025-04-20 03:56:06] 2025-04-20 07:55:45,570 | INFO     | ..............................
[2025-04-20 03:56:06] 2025-04-20 07:55:45,570 | INFO     | . Timing measurements:
[2025-04-20 03:56:06] 2025-04-20 07:55:45,570 | INFO     | . get job = 0 s
[2025-04-20 03:56:06] 2025-04-20 07:55:45,570 | INFO     | . initial setup = 2 s
[2025-04-20 03:56:06] 2025-04-20 07:55:45,570 | INFO     | . payload setup = 7 s
[2025-04-20 03:56:06] 2025-04-20 07:55:45,570 | INFO     | . stage-in = 0 s
[2025-04-20 03:56:06] 2025-04-20 07:55:45,570 | INFO     | . payload execution = 4933 s
[2025-04-20 03:56:06] 2025-04-20 07:55:45,571 | INFO     | . stage-out = 0 s
[2025-04-20 03:56:06] 2025-04-20 07:55:45,571 | INFO     | . log creation = 0 s
[2025-04-20 03:56:06] 2025-04-20 07:55:45,571 | INFO     | ..............................
[2025-04-20 03:56:06] 2025-04-20 07:55:45,959 | INFO     | 
[2025-04-20 03:56:06] 2025-04-20 07:55:45,960 | INFO     | job summary report
[2025-04-20 03:56:06] 2025-04-20 07:55:45,960 | INFO     | --------------------------------------------------
[2025-04-20 03:56:06] 2025-04-20 07:55:45,960 | INFO     | PanDA job id: 6608527293
[2025-04-20 03:56:06] 2025-04-20 07:55:45,960 | INFO     | task id: 44075483
[2025-04-20 03:56:06] 2025-04-20 07:55:45,961 | INFO     | errors: (none)
[2025-04-20 03:56:06] 2025-04-20 07:55:45,961 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-20 03:56:06] 2025-04-20 07:55:45,961 | INFO     | pilot state: finished 
[2025-04-20 03:56:06] 2025-04-20 07:55:45,961 | INFO     | transexitcode: 0
[2025-04-20 03:56:06] 2025-04-20 07:55:45,961 | INFO     | exeerrorcode: 0
[2025-04-20 03:56:06] 2025-04-20 07:55:45,961 | INFO     | exeerrordiag: 
[2025-04-20 03:56:06] 2025-04-20 07:55:45,962 | INFO     | exitcode: 0
[2025-04-20 03:56:06] 2025-04-20 07:55:45,962 | INFO     | exitmsg: OK
[2025-04-20 03:56:06] 2025-04-20 07:55:45,962 | INFO     | cpuconsumptiontime: 46345 s
[2025-04-20 03:56:06] 2025-04-20 07:55:45,962 | INFO     | nevents: 400
[2025-04-20 03:56:06] 2025-04-20 07:55:45,962 | INFO     | neventsw: 0
[2025-04-20 03:56:06] 2025-04-20 07:55:45,962 | INFO     | pid: 9060
[2025-04-20 03:56:06] 2025-04-20 07:55:45,963 | INFO     | pgrp: 9060
[2025-04-20 03:56:06] 2025-04-20 07:55:45,963 | INFO     | corecount: 12
[2025-04-20 03:56:06] 2025-04-20 07:55:45,963 | INFO     | event service: False
[2025-04-20 03:56:06] 2025-04-20 07:55:45,963 | INFO     | sizes: {0: 2426602, 1: 2426801, 5: 2427007, 11: 2427063, 4944: 2453184, 4945: 2462308, 4946: 2462308, 4953: 2462478}
[2025-04-20 03:56:06] 2025-04-20 07:55:45,963 | INFO     | --------------------------------------------------
[2025-04-20 03:56:06] 2025-04-20 07:55:45,963 | INFO     | 
[2025-04-20 03:56:06] 2025-04-20 07:55:45,964 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-20 03:56:06] 2025-04-20 07:55:45,987 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-20 03:56:06] 2025-04-20 07:55:45,988 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-20 03:56:06] 2025-04-20 07:55:45,988 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-20 03:56:06] 2025-04-20 07:55:45,988 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-20 03:56:06] 2025-04-20 07:55:45,988 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-20 03:56:06] 2025-04-20 07:55:45,989 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-20 03:56:06] 2025-04-20 07:55:45,989 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-20 03:56:06] 2025-04-20 07:55:45,989 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-20 03:56:06] 2025-04-20 07:55:45,989 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-20 03:56:06] 2025-04-20 07:55:45,989 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-20 03:56:06] 2025-04-20 07:55:45,989 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-20 03:56:06] 2025-04-20 07:55:45,990 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-20 03:56:06] 2025-04-20 07:55:45,990 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-20 03:56:06] 2025-04-20 07:55:45,990 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-20 03:56:06] 2025-04-20 07:55:45,990 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-20 03:56:06] 2025-04-20 07:55:45,990 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-20 03:56:06] 2025-04-20 07:55:45,990 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-20 03:56:06] 2025-04-20 07:55:45,991 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-20 03:56:06] 2025-04-20 07:55:45,991 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-20 03:56:06] 2025-04-20 07:55:45,991 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-20 03:56:06] 2025-04-20 07:55:45,991 | INFO     | job 6608527293 has completed (purged errors)
[2025-04-20 03:56:06] 2025-04-20 07:55:45,991 | INFO     | overall cleanup function is called
[2025-04-20 03:56:06] 2025-04-20 07:55:47,000 | INFO     | --- collectZombieJob: --- 10, [9060]
[2025-04-20 03:56:06] 2025-04-20 07:55:47,000 | INFO     | zombie collector waiting for pid 9060
[2025-04-20 03:56:06] 2025-04-20 07:55:47,000 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-20 03:56:06] 2025-04-20 07:55:47,000 | INFO     | collected zombie processes
[2025-04-20 03:56:06] 2025-04-20 07:55:47,000 | INFO     | will attempt to kill all subprocesses of pid=9060
[2025-04-20 03:56:06] 2025-04-20 07:55:47,095 | INFO     | process IDs to be killed: [9060] (in reverse order)
[2025-04-20 03:56:06] 2025-04-20 07:55:47,146 | WARNING  | found no corresponding commands to process id(s)
[2025-04-20 03:56:06] 2025-04-20 07:55:47,146 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-20 03:56:06] 2025-04-20 07:55:47,150 | INFO     | did not find any defunct processes belonging to 9060
[2025-04-20 03:56:06] 2025-04-20 07:55:47,153 | INFO     | did not find any defunct processes belonging to 9060
[2025-04-20 03:56:06] 2025-04-20 07:55:47,153 | INFO     | ready for new job
[2025-04-20 03:56:06] 2025-04-20 07:55:47,153 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-20 03:56:06] 2025-04-20 07:55:47,154 | INFO     | **************************************
[2025-04-20 03:56:06] 2025-04-20 07:55:47,155 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-20 03:56:06] 2025-04-20 07:55:47,155 | INFO     | **************************************
[2025-04-20 03:56:06] 2025-04-20 07:55:47,155 | INFO     | 
[2025-04-20 03:56:06] 2025-04-20 07:55:47,156 | INFO     | architecture information:
[2025-04-20 03:56:06] 2025-04-20 07:55:47,156 | INFO     | executing command: cat /etc/os-release
[2025-04-20 03:56:06] 2025-04-20 07:55:47,171 | INFO     | cat /etc/os-release:
[2025-04-20 03:56:06] NAME="CentOS Linux"
[2025-04-20 03:56:06] VERSION="7 (Core)"
[2025-04-20 03:56:06] ID="centos"
[2025-04-20 03:56:06] ID_LIKE="rhel fedora"
[2025-04-20 03:56:06] VERSION_ID="7"
[2025-04-20 03:56:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-20 03:56:06] ANSI_COLOR="0;31"
[2025-04-20 03:56:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-20 03:56:06] HOME_URL="https://www.centos.org/"
[2025-04-20 03:56:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-20 03:56:06] 
[2025-04-20 03:56:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-20 03:56:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-20 03:56:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-20 03:56:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-20 03:56:06] 
[2025-04-20 03:56:06] 2025-04-20 07:55:47,171 | INFO     | **************************************
[2025-04-20 03:56:06] 2025-04-20 07:55:47,674 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-20 03:56:06] 2025-04-20 07:55:47,691 | INFO     | sufficient remaining disk space (29398925312 B)
[2025-04-20 03:56:06] 2025-04-20 07:55:47,691 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-20 03:56:06] 2025-04-20 07:55:47,691 | INFO     | current server update state: UPDATING_FINAL
[2025-04-20 03:56:06] 2025-04-20 07:55:47,691 | INFO     | update_server=False
[2025-04-20 03:56:06] 2025-04-20 07:55:47,692 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-20 03:56:06] 2025-04-20 07:55:47,969 | INFO     | all data control threads have been joined
[2025-04-20 03:56:06] 2025-04-20 07:55:48,228 | INFO     | found 0 job(s) in 20 queues
[2025-04-20 03:56:06] 2025-04-20 07:55:48,228 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-20 03:56:06] 2025-04-20 07:55:48,236 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-20 03:56:06] 2025-04-20 07:55:48,436 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-20 03:56:06] 2025-04-20 07:55:48,436 | INFO     | aborting loop
[2025-04-20 03:56:06] 2025-04-20 07:55:48,697 | INFO     | [job] retrieve thread has finished
[2025-04-20 03:56:06] 2025-04-20 07:55:48,819 | INFO     | [payload] failed_post thread has finished
[2025-04-20 03:56:06] 2025-04-20 07:55:48,827 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-20 03:56:06] 2025-04-20 07:55:48,876 | INFO     | [payload] execute_payloads thread has finished
[2025-04-20 03:56:06] 2025-04-20 07:55:48,882 | INFO     | all payload control threads have been joined
[2025-04-20 03:56:06] 2025-04-20 07:55:48,974 | INFO     | [data] control thread has finished
[2025-04-20 03:56:06] 2025-04-20 07:55:49,044 | INFO     | all job control threads have been joined
[2025-04-20 03:56:06] 2025-04-20 07:55:49,046 | INFO     | [job] create_data_payload thread has finished
[2025-04-20 03:56:06] 2025-04-20 07:55:49,052 | INFO     | [payload] validate_pre thread has finished
[2025-04-20 03:56:06] 2025-04-20 07:55:49,128 | INFO     | [data] copytool_in thread has finished
[2025-04-20 03:56:06] 2025-04-20 07:55:49,440 | INFO     | [job] job monitor thread has finished
[2025-04-20 03:56:06] 2025-04-20 07:55:49,573 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-20 03:56:06] 2025-04-20 07:55:49,673 | INFO     | [payload] validate_post thread has finished
[2025-04-20 03:56:06] 2025-04-20 07:55:49,888 | INFO     | [payload] control thread has finished
[2025-04-20 03:56:06] 2025-04-20 07:55:50,012 | INFO     | [job] validate thread has finished
[2025-04-20 03:56:06] 2025-04-20 07:55:50,049 | INFO     | [job] control thread has finished
[2025-04-20 03:56:06] 2025-04-20 07:55:50,667 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-20 03:56:06] 2025-04-20 07:55:50,832 | INFO     | [data] copytool_out thread has finished
[2025-04-20 03:56:06] 2025-04-20 07:55:51,672 | INFO     | [job] queue monitor thread has finished
[2025-04-20 03:56:06] 2025-04-20 07:55:53,579 | INFO     | [data] queue_monitor thread has finished
[2025-04-20 03:56:06] 2025-04-20 07:55:58,375 | INFO     | job.realtimelogging is not enabled
[2025-04-20 03:56:06] 2025-04-20 07:55:59,380 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-20 03:56:06] 2025-04-20 07:56:01,151 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140327885391680)>', '<ExcThread(monitor, started 140327159580416)>']
[2025-04-20 03:56:06] 2025-04-20 07:56:01,289 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-20 03:56:06] 2025-04-20 07:56:01,289 | INFO     | [monitor] control thread has ended
[2025-04-20 03:56:06] 2025-04-20 07:56:06,161 | INFO     | all workflow threads have been joined
[2025-04-20 03:56:06] 2025-04-20 07:56:06,161 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-20 03:56:06] 2025-04-20 07:56:06,161 | INFO     | traces error code: 0
[2025-04-20 03:56:06] 2025-04-20 07:56:06,163 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-20 03:56:06] 2025-04-20 07:56:06,253 [wrapper] ==== pilot stdout END ====
[2025-04-20 03:56:06] 2025-04-20 07:56:06,258 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-20 03:56:06] 2025-04-20 07:56:06,261 [wrapper] pilotpid: 2643
[2025-04-20 03:56:06] 2025-04-20 07:56:06,265 [wrapper] Pilot exit status: 0
[2025-04-20 03:56:06] 2025-04-20 07:56:06,281 [wrapper] pandaids: 6608527293
[2025-04-20 03:56:06] 2025-04-20 07:56:06,317 [wrapper] cleanup supervisor_pilot 27492 2644
[2025-04-20 03:56:06] 2025-04-20 07:56:06,321 [wrapper] Test setup, not cleaning
[2025-04-20 03:56:06] 2025-04-20 07:56:06,325 [wrapper] apfmon messages muted
[2025-04-20 03:56:06] 2025-04-20 07:56:06,329 [wrapper] ==== wrapper stdout END ====
[2025-04-20 03:56:06] 2025-04-20 07:56:06,333 [wrapper] ==== wrapper stderr END ====
[2025-04-20 03:56:06]  *** Error codes and diagnostics ***
[2025-04-20 03:56:06]     "exeErrorCode": 0,
[2025-04-20 03:56:06]     "exeErrorDiag": "",
[2025-04-20 03:56:06]     "pilotErrorCode": 0,
[2025-04-20 03:56:06]     "pilotErrorDiag": "",
[2025-04-20 03:56:06]  *** Listing of results directory ***
[2025-04-20 03:56:06] total 414280
[2025-04-20 03:56:06] -rw-r--r-- 1 boincer umatlas    495897 Apr 19 23:23 pilot3.tar.gz
[2025-04-20 03:56:06] -rw-r--r-- 1 boincer umatlas      5111 Apr 19 23:31 queuedata.json
[2025-04-20 03:56:06] -rwx------ 1 boincer umatlas     37140 Apr 19 23:32 runpilot2-wrapper.sh
[2025-04-20 03:56:06] -rw-r--r-- 1 boincer umatlas       100 Apr 20 02:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-20 03:56:06] -rwxr-xr-x 1 boincer umatlas      7986 Apr 20 02:32 run_atlas
[2025-04-20 03:56:06] -rw-r--r-- 1 boincer umatlas       105 Apr 20 02:32 job.xml
[2025-04-20 03:56:06] -rw-r--r-- 2 boincer umatlas 223293760 Apr 20 02:32 EVNT.44075481._003594.pool.root.1
[2025-04-20 03:56:06] -rw-r--r-- 2 boincer umatlas     17569 Apr 20 02:32 start_atlas.sh
[2025-04-20 03:56:06] drwxrwx--x 2 boincer umatlas      4096 Apr 20 02:32 shared
[2025-04-20 03:56:06] -rw-r--r-- 2 boincer umatlas    508887 Apr 20 02:32 input.tar.gz
[2025-04-20 03:56:06] -rw-r--r-- 1 boincer umatlas         0 Apr 20 02:32 boinc_lockfile
[2025-04-20 03:56:06] -rw-r--r-- 1 boincer umatlas      2578 Apr 20 02:32 pandaJob.out
[2025-04-20 03:56:06] -rw------- 1 boincer umatlas       424 Apr 20 02:32 setup.sh.local
[2025-04-20 03:56:06] -rw------- 1 boincer umatlas    991292 Apr 20 02:32 agis_schedconf.cvmfs.json
[2025-04-20 03:56:06] -rw------- 1 boincer umatlas   1618536 Apr 20 02:32 agis_ddmendpoints.agis.ALL.json
[2025-04-20 03:56:06] drwx------ 4 boincer umatlas      4096 Apr 20 02:32 pilot3
[2025-04-20 03:56:06] -rw-r--r-- 1 boincer umatlas      5867 Apr 20 03:47 init_data.xml
[2025-04-20 03:56:06] -rw------- 1 boincer umatlas        95 Apr 20 03:54 pilot_heartbeat.json
[2025-04-20 03:56:06] -rw-r--r-- 1 boincer umatlas       529 Apr 20 03:55 boinc_task_state.xml
[2025-04-20 03:56:06] -rw------- 1 boincer umatlas 195396252 Apr 20 03:55 HITS.44075483._091991.pool.root.1
[2025-04-20 03:56:06] -rw------- 1 boincer umatlas      1048 Apr 20 03:55 memory_monitor_summary.json
[2025-04-20 03:56:06] -rw------- 1 boincer umatlas    364759 Apr 20 03:55 log.44075483._091991.job.log.tgz.1
[2025-04-20 03:56:06] -rw------- 1 boincer umatlas      7749 Apr 20 03:55 heartbeat.json
[2025-04-20 03:56:06] -rw-r--r-- 1 boincer umatlas      8192 Apr 20 03:55 boinc_mmap_file
[2025-04-20 03:56:06] -rw-r--r-- 1 boincer umatlas        27 Apr 20 03:55 wrapper_checkpoint.txt
[2025-04-20 03:56:06] -rw------- 1 boincer umatlas      4425 Apr 20 03:56 pilotlog.txt
[2025-04-20 03:56:06] -rw------- 1 boincer umatlas    470472 Apr 20 03:56 log.44075483._091991.job.log.1
[2025-04-20 03:56:06] -rw------- 1 boincer umatlas       357 Apr 20 03:56 output.list
[2025-04-20 03:56:06] -rw-r--r-- 1 boincer umatlas       620 Apr 20 03:56 runtime_log
[2025-04-20 03:56:06] -rw------- 1 boincer umatlas    849920 Apr 20 03:56 result.tar.gz
[2025-04-20 03:56:06] -rw-r--r-- 1 boincer umatlas     11015 Apr 20 03:56 runtime_log.err
[2025-04-20 03:56:06] -rw------- 1 boincer umatlas       658 Apr 20 03:56 4PQKDm5aaQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmvXjLDmzmnJHn.diag
[2025-04-20 03:56:06] -rw-r--r-- 1 boincer umatlas     21646 Apr 20 03:56 stderr.txt
[2025-04-20 03:56:06] HITS file was successfully produced:
[2025-04-20 03:56:06] -rw------- 1 boincer umatlas 195396252 Apr 20 03:55 shared/HITS.pool.root.1
[2025-04-20 03:56:06]  *** Contents of shared directory: ***
[2025-04-20 03:56:06] total 410236
[2025-04-20 03:56:06] -rw-r--r-- 2 boincer umatlas 223293760 Apr 20 02:32 ATLAS.root_0
[2025-04-20 03:56:06] -rw-r--r-- 2 boincer umatlas     17569 Apr 20 02:32 start_atlas.sh
[2025-04-20 03:56:06] -rw-r--r-- 2 boincer umatlas    508887 Apr 20 02:32 input.tar.gz
[2025-04-20 03:56:06] -rw------- 1 boincer umatlas 195396252 Apr 20 03:55 HITS.pool.root.1
[2025-04-20 03:56:06] -rw------- 1 boincer umatlas    849920 Apr 20 03:56 result.tar.gz
03:56:07 (31336): run_atlas exited; CPU time 46334.687420
03:56:07 (31336): called boinc_finish(0)

</stderr_txt>
]]>

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