Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
17:41:21 (1879774): wrapper (7.7.26015): starting
17:41:21 (1879774): wrapper: running run_atlas (--nthreads 3)
[2025-04-20 17:41:21] Arguments: --nthreads 3
[2025-04-20 17:41:21] Threads: 3
[2025-04-20 17:41:21] Checking for CVMFS
[2025-04-20 17:41:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-20 17:41:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-20 17:41:21] Running cvmfs_config stat atlas.cern.ch
[2025-04-20 17:41:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-20 17:41:21] 2.9.2.0 2931 6349 70400 145080 3 56 27602957 36864000 0 130560 0 4866065 99.992 1622471 8237 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-04-20 17:41:21] CVMFS is ok
[2025-04-20 17:41:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-20 17:41:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-20 17:41:21] Further information can be found at the LHC@home message board.
[2025-04-20 17:41:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-20 17:41:21] Checking for apptainer binary...
[2025-04-20 17:41:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-20 17:41:21] Running /usr/bin/apptainer --version
[2025-04-20 17:41:22] apptainer version 1.3.6-6.1
[2025-04-20 17:41:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-20 17:41:22] belleA115a
[2025-04-20 17:41:22] apptainer works
[2025-04-20 17:41:22] Set ATHENA_PROC_NUMBER=3
[2025-04-20 17:41:22] Set ATHENA_CORE_NUMBER=3
[2025-04-20 17:41:22] Starting ATLAS job with PandaID=6608466240
[2025-04-20 17:41:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-20 19:20:44]  *** The last 200 lines of the pilot log: ***
[2025-04-20 19:20:44]  mtime=0
[2025-04-20 19:20:44]  protocol_id=None
[2025-04-20 19:20:44]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-20 19:20:44]  replicas=None
[2025-04-20 19:20:44]  scope=mc23_13p6TeV
[2025-04-20 19:20:44]  status=None
[2025-04-20 19:20:44]  status_code=0
[2025-04-20 19:20:44]  storage_token=
[2025-04-20 19:20:44]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6608466240/log.44075483._091108.job.log.tgz.1
[2025-04-20 19:20:44]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/50/c2/log.44075483._091108.job.log.tgz.1
[2025-04-20 19:20:44]  workdir=None
[2025-04-20 19:20:44] ]
[2025-04-20 19:20:44] 2025-04-20 17:20:02,294 | INFO     | transferring file log.44075483._091108.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6608466240/log.44075483._091108.job.log.tgz.1 to /local/data/boinc/
[2025-04-20 19:20:44] 2025-04-20 17:20:02,294 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6608466240/log.44075483._091108.job.log.tgz.1 /local/data/boinc/slots/0/log.44075483._0911
[2025-04-20 19:20:44] 2025-04-20 17:20:02,306 | INFO     | adding to output.list: log.44075483._091108.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/50/c2/log.44075483._091108.job.log.tg
[2025-04-20 19:20:44] 2025-04-20 17:20:02,307 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-20 19:20:44] 2025-04-20 17:20:02,307 | INFO     | summary of transferred files:
[2025-04-20 19:20:44] 2025-04-20 17:20:02,307 | INFO     |  -- lfn=log.44075483._091108.job.log.tgz.1, status_code=0, status=transferred
[2025-04-20 19:20:44] 2025-04-20 17:20:02,307 | INFO     | stage-out finished correctly
[2025-04-20 19:20:44] 2025-04-20 17:20:02,339 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-20 19:20:44] 2025-04-20 17:20:02,368 | INFO     | job 6608466240 has state=finished
[2025-04-20 19:20:44] 2025-04-20 17:20:02,368 | INFO     | preparing for final server update for job 6608466240 in state='finished'
[2025-04-20 19:20:44] 2025-04-20 17:20:02,368 | INFO     | this job has now completed (state=finished)
[2025-04-20 19:20:44] 2025-04-20 17:20:02,368 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-20 19:20:44] 2025-04-20 17:20:02,368 | INFO     | log transfer has been attempted: DONE
[2025-04-20 19:20:44] 2025-04-20 17:20:02,368 | INFO     | job 6608466240 has finished - writing final server update
[2025-04-20 19:20:44] 2025-04-20 17:20:02,368 | INFO     | total number of processed events: 400 (read)
[2025-04-20 19:20:44] 2025-04-20 17:20:02,369 | INFO     | executing command: lscpu
[2025-04-20 19:20:44] 2025-04-20 17:20:02,382 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-20 19:20:44] 2025-04-20 17:20:07,406 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-20 19:20:44] 2025-04-20 17:20:07,406 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6608466240/memory_monitor_summary.json (trf name=prmon)
[2025-04-20 19:20:44] 2025-04-20 17:20:07,407 | INFO     | extracted standard info from prmon json
[2025-04-20 19:20:44] 2025-04-20 17:20:07,407 | INFO     | extracted standard memory fields from prmon json
[2025-04-20 19:20:44] 2025-04-20 17:20:07,407 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-20 19:20:44] 2025-04-20 17:20:07,407 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-20 19:20:44] 2025-04-20 17:20:07,407 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-20 19:20:44] 2025-04-20 17:20:07,408 | INFO     | fitting pss+swap vs Time
[2025-04-20 19:20:44] 2025-04-20 17:20:07,408 | INFO     | sum of square deviations: 226022842.5
[2025-04-20 19:20:44] 2025-04-20 17:20:07,408 | INFO     | sum of deviations: 3546980481.0000014
[2025-04-20 19:20:44] 2025-04-20 17:20:07,408 | INFO     | mean x: 1745166737.5
[2025-04-20 19:20:44] 2025-04-20 17:20:07,408 | INFO     | mean y: 2379603.111111111
[2025-04-20 19:20:44] 2025-04-20 17:20:07,408 | INFO     | -- intersect: -27384552998.636665
[2025-04-20 19:20:44] 2025-04-20 17:20:07,408 | INFO     | intersect: -27384552998.636665
[2025-04-20 19:20:44] 2025-04-20 17:20:07,408 | INFO     | chi2: 1.4741811935633553
[2025-04-20 19:20:44] 2025-04-20 17:20:07,408 | INFO     | -- intersect: -27384552998.636665
[2025-04-20 19:20:44] 2025-04-20 17:20:07,408 | INFO     | current memory leak: 15.69 B/s (using 90 data points, chi2=1.47)
[2025-04-20 19:20:44] 2025-04-20 17:20:07,409 | INFO     | ..............................
[2025-04-20 19:20:44] 2025-04-20 17:20:07,409 | INFO     | . Timing measurements:
[2025-04-20 19:20:44] 2025-04-20 17:20:07,409 | INFO     | . get job = 0 s
[2025-04-20 19:20:44] 2025-04-20 17:20:07,409 | INFO     | . initial setup = 1 s
[2025-04-20 19:20:44] 2025-04-20 17:20:07,409 | INFO     | . payload setup = 6 s
[2025-04-20 19:20:44] 2025-04-20 17:20:07,409 | INFO     | . stage-in = 0 s
[2025-04-20 19:20:44] 2025-04-20 17:20:07,409 | INFO     | . payload execution = 5883 s
[2025-04-20 19:20:44] 2025-04-20 17:20:07,409 | INFO     | . stage-out = 0 s
[2025-04-20 19:20:44] 2025-04-20 17:20:07,409 | INFO     | . log creation = 0 s
[2025-04-20 19:20:44] 2025-04-20 17:20:07,409 | INFO     | ..............................
[2025-04-20 19:20:44] 2025-04-20 17:20:07,461 | INFO     | 
[2025-04-20 19:20:44] 2025-04-20 17:20:07,461 | INFO     | job summary report
[2025-04-20 19:20:44] 2025-04-20 17:20:07,461 | INFO     | --------------------------------------------------
[2025-04-20 19:20:44] 2025-04-20 17:20:07,461 | INFO     | PanDA job id: 6608466240
[2025-04-20 19:20:44] 2025-04-20 17:20:07,461 | INFO     | task id: 44075483
[2025-04-20 19:20:44] 2025-04-20 17:20:07,461 | INFO     | errors: (none)
[2025-04-20 19:20:44] 2025-04-20 17:20:07,461 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-20 19:20:44] 2025-04-20 17:20:07,461 | INFO     | pilot state: finished 
[2025-04-20 19:20:44] 2025-04-20 17:20:07,461 | INFO     | transexitcode: 0
[2025-04-20 19:20:44] 2025-04-20 17:20:07,461 | INFO     | exeerrorcode: 0
[2025-04-20 19:20:44] 2025-04-20 17:20:07,461 | INFO     | exeerrordiag: 
[2025-04-20 19:20:44] 2025-04-20 17:20:07,461 | INFO     | exitcode: 0
[2025-04-20 19:20:44] 2025-04-20 17:20:07,461 | INFO     | exitmsg: OK
[2025-04-20 19:20:44] 2025-04-20 17:20:07,461 | INFO     | cpuconsumptiontime: 15705 s
[2025-04-20 19:20:44] 2025-04-20 17:20:07,461 | INFO     | nevents: 400
[2025-04-20 19:20:44] 2025-04-20 17:20:07,461 | INFO     | neventsw: 0
[2025-04-20 19:20:44] 2025-04-20 17:20:07,461 | INFO     | pid: 1889882
[2025-04-20 19:20:44] 2025-04-20 17:20:07,461 | INFO     | pgrp: 1889882
[2025-04-20 19:20:44] 2025-04-20 17:20:07,461 | INFO     | corecount: 3
[2025-04-20 19:20:44] 2025-04-20 17:20:07,461 | INFO     | event service: False
[2025-04-20 19:20:44] 2025-04-20 17:20:07,461 | INFO     | sizes: {0: 2426826, 5: 2427032, 11: 2427088, 5893: 2453710, 5894: 2453709, 5895: 2462896, 5900: 2463010}
[2025-04-20 19:20:44] 2025-04-20 17:20:07,461 | INFO     | --------------------------------------------------
[2025-04-20 19:20:44] 2025-04-20 17:20:07,461 | INFO     | 
[2025-04-20 19:20:44] 2025-04-20 17:20:07,461 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-04-20 19:20:44] 2025-04-20 17:20:07,473 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-20 19:20:44] 2025-04-20 17:20:07,473 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-20 19:20:44] 2025-04-20 17:20:07,473 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-20 19:20:44] 2025-04-20 17:20:07,473 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-20 19:20:44] 2025-04-20 17:20:07,474 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-20 19:20:44] 2025-04-20 17:20:07,474 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-20 19:20:44] 2025-04-20 17:20:07,474 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-20 19:20:44] 2025-04-20 17:20:07,474 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-20 19:20:44] 2025-04-20 17:20:07,474 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-20 19:20:44] 2025-04-20 17:20:07,474 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-20 19:20:44] 2025-04-20 17:20:07,474 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-20 19:20:44] 2025-04-20 17:20:07,474 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-20 19:20:44] 2025-04-20 17:20:07,474 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-20 19:20:44] 2025-04-20 17:20:07,474 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-20 19:20:44] 2025-04-20 17:20:07,474 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-20 19:20:44] 2025-04-20 17:20:07,474 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-20 19:20:44] 2025-04-20 17:20:07,474 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-20 19:20:44] 2025-04-20 17:20:07,474 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-20 19:20:44] 2025-04-20 17:20:07,474 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-20 19:20:44] 2025-04-20 17:20:07,474 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-20 19:20:44] 2025-04-20 17:20:07,474 | INFO     | job 6608466240 has completed (purged errors)
[2025-04-20 19:20:44] 2025-04-20 17:20:07,474 | INFO     | overall cleanup function is called
[2025-04-20 19:20:44] 2025-04-20 17:20:07,763 | WARNING  | process 1889882 can no longer be monitored (due to stat problems) - aborting
[2025-04-20 19:20:44] 2025-04-20 17:20:07,792 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-04-20 19:20:44] 2025-04-20 17:20:07,792 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-04-20 19:20:44] 2025-04-20 17:20:07,793 | INFO     | skipping file size check of payload stdout file (/local/data/boinc/slots/0/PanDA_Pilot-6608466240/payload.stdout) since it has not been created yet
[2025-04-20 19:20:44] 2025-04-20 17:20:07,793 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-04-20 19:20:44] 2025-04-20 17:20:07,804 | INFO     | sufficient remaining disk space (328044904448 B)
[2025-04-20 19:20:44] 2025-04-20 17:20:07,804 | WARNING  | skipping size check of workdir since it has not been created yet
[2025-04-20 19:20:44] 2025-04-20 17:20:07,804 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6608466240/HITS.44075483._091108.pool.root.1 since it does not exist
[2025-04-20 19:20:44] 2025-04-20 17:20:07,841 | INFO     | number of running child processes to parent process 1889882: 1
[2025-04-20 19:20:44] 2025-04-20 17:20:07,841 | INFO     | maximum number of monitored processes: 6
[2025-04-20 19:20:44] 2025-04-20 17:20:07,841 | INFO     | aborting job monitoring since job object (job id=6608466240) has expired
[2025-04-20 19:20:44] 2025-04-20 17:20:08,481 | INFO     | --- collectZombieJob: --- 10, [1889882]
[2025-04-20 19:20:44] 2025-04-20 17:20:08,481 | INFO     | zombie collector waiting for pid 1889882
[2025-04-20 19:20:44] 2025-04-20 17:20:08,481 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-20 19:20:44] 2025-04-20 17:20:08,481 | INFO     | collected zombie processes
[2025-04-20 19:20:44] 2025-04-20 17:20:08,482 | INFO     | will attempt to kill all subprocesses of pid=1889882
[2025-04-20 19:20:44] 2025-04-20 17:20:08,521 | INFO     | process IDs to be killed: [1889882] (in reverse order)
[2025-04-20 19:20:44] 2025-04-20 17:20:08,547 | WARNING  | found no corresponding commands to process id(s)
[2025-04-20 19:20:44] 2025-04-20 17:20:08,548 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-20 19:20:44] 2025-04-20 17:20:08,549 | INFO     | did not find any defunct processes belonging to 1889882
[2025-04-20 19:20:44] 2025-04-20 17:20:08,550 | INFO     | did not find any defunct processes belonging to 1889882
[2025-04-20 19:20:44] 2025-04-20 17:20:08,550 | INFO     | ready for new job
[2025-04-20 19:20:44] 2025-04-20 17:20:08,550 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-20 19:20:44] 2025-04-20 17:20:08,550 | INFO     | **************************************
[2025-04-20 19:20:44] 2025-04-20 17:20:08,551 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-20 19:20:44] 2025-04-20 17:20:08,551 | INFO     | **************************************
[2025-04-20 19:20:44] 2025-04-20 17:20:08,551 | INFO     | 
[2025-04-20 19:20:44] 2025-04-20 17:20:08,551 | INFO     | architecture information:
[2025-04-20 19:20:44] 2025-04-20 17:20:08,551 | INFO     | executing command: cat /etc/os-release
[2025-04-20 19:20:44] 2025-04-20 17:20:08,561 | INFO     | cat /etc/os-release:
[2025-04-20 19:20:44] NAME="CentOS Linux"
[2025-04-20 19:20:44] VERSION="7 (Core)"
[2025-04-20 19:20:44] ID="centos"
[2025-04-20 19:20:44] ID_LIKE="rhel fedora"
[2025-04-20 19:20:44] VERSION_ID="7"
[2025-04-20 19:20:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-20 19:20:44] ANSI_COLOR="0;31"
[2025-04-20 19:20:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-20 19:20:44] HOME_URL="https://www.centos.org/"
[2025-04-20 19:20:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-20 19:20:44] 
[2025-04-20 19:20:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-20 19:20:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-20 19:20:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-20 19:20:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-20 19:20:44] 
[2025-04-20 19:20:44] 2025-04-20 17:20:08,561 | INFO     | **************************************
[2025-04-20 19:20:44] 2025-04-20 17:20:09,064 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-04-20 19:20:44] 2025-04-20 17:20:09,077 | INFO     | sufficient remaining disk space (328044904448 B)
[2025-04-20 19:20:44] 2025-04-20 17:20:09,078 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-20 19:20:44] 2025-04-20 17:20:09,078 | INFO     | current server update state: UPDATING_FINAL
[2025-04-20 19:20:44] 2025-04-20 17:20:09,078 | INFO     | update_server=False
[2025-04-20 19:20:44] 2025-04-20 17:20:09,078 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-20 19:20:44] 2025-04-20 17:20:09,078 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-20 19:20:44] 2025-04-20 17:20:09,078 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-20 19:20:44] 2025-04-20 17:20:09,078 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-20 19:20:44] 2025-04-20 17:20:09,078 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-20 19:20:44] 2025-04-20 17:20:09,078 | INFO     | aborting loop
[2025-04-20 19:20:44] 2025-04-20 17:20:09,079 | INFO     | found 0 job(s) in 20 queues
[2025-04-20 19:20:44] 2025-04-20 17:20:09,079 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-20 19:20:44] 2025-04-20 17:20:09,079 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-20 19:20:44] 2025-04-20 17:20:09,494 | INFO     | all payload control threads have been joined
[2025-04-20 19:20:44] 2025-04-20 17:20:09,559 | INFO     | all job control threads have been joined
[2025-04-20 19:20:44] 2025-04-20 17:20:09,603 | INFO     | all data control threads have been joined
[2025-04-20 19:20:44] 2025-04-20 17:20:10,084 | INFO     | [job] retrieve thread has finished
[2025-04-20 19:20:44] 2025-04-20 17:20:10,084 | INFO     | [job] job monitor thread has finished
[2025-04-20 19:20:44] 2025-04-20 17:20:10,085 | INFO     | [job] queue monitor thread has finished
[2025-04-20 19:20:44] 2025-04-20 17:20:10,278 | INFO     | [job] validate thread has finished
[2025-04-20 19:20:44] 2025-04-20 17:20:10,351 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-20 19:20:44] 2025-04-20 17:20:10,406 | INFO     | [job] create_data_payload thread has finished
[2025-04-20 19:20:44] 2025-04-20 17:20:10,437 | INFO     | [payload] validate_post thread has finished
[2025-04-20 19:20:44] 2025-04-20 17:20:10,500 | INFO     | [payload] control thread has finished
[2025-04-20 19:20:44] 2025-04-20 17:20:10,500 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-20 19:20:44] 2025-04-20 17:20:10,511 | INFO     | [payload] validate_pre thread has finished
[2025-04-20 19:20:44] 2025-04-20 17:20:10,565 | INFO     | [job] control thread has finished
[2025-04-20 19:20:44] 2025-04-20 17:20:10,609 | INFO     | [data] control thread has finished
[2025-04-20 19:20:44] 2025-04-20 17:20:10,833 | INFO     | [data] copytool_in thread has finished
[2025-04-20 19:20:44] 2025-04-20 17:20:11,011 | INFO     | [payload] execute_payloads thread has finished
[2025-04-20 19:20:44] 2025-04-20 17:20:11,523 | INFO     | [payload] failed_post thread has finished
[2025-04-20 19:20:44] 2025-04-20 17:20:12,357 | INFO     | [data] copytool_out thread has finished
[2025-04-20 19:20:44] 2025-04-20 17:20:13,085 | INFO     | [data] queue_monitor thread has finished
[2025-04-20 19:20:44] 2025-04-20 17:20:14,712 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140217849722688)>', '<ExcThread(monitor, started 140216908109568)>']
[2025-04-20 19:20:44] 2025-04-20 17:20:15,112 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-20 19:20:44] 2025-04-20 17:20:15,112 | INFO     | [monitor] control thread has ended
[2025-04-20 19:20:44] 2025-04-20 17:20:19,738 | INFO     | all workflow threads have been joined
[2025-04-20 19:20:44] 2025-04-20 17:20:19,739 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-20 19:20:44] 2025-04-20 17:20:19,739 | INFO     | traces error code: 0
[2025-04-20 19:20:44] 2025-04-20 17:20:19,740 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-20 19:20:44] 2025-04-20 17:20:19,786 [wrapper] ==== pilot stdout END ====
[2025-04-20 19:20:44] 2025-04-20 17:20:19,789 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-20 19:20:44] 2025-04-20 17:20:19,792 [wrapper] pilotpid: 1883435
[2025-04-20 19:20:44] 2025-04-20 17:20:19,795 [wrapper] Pilot exit status: 0
[2025-04-20 19:20:44] 2025-04-20 17:20:19,803 [wrapper] pandaids: 6608466240
[2025-04-20 19:20:44] 2025-04-20 17:20:19,820 [wrapper] cleanup supervisor_pilot 1902267 1883436
[2025-04-20 19:20:44] 2025-04-20 17:20:19,823 [wrapper] Test setup, not cleaning
[2025-04-20 19:20:44] 2025-04-20 17:20:19,826 [wrapper] apfmon messages muted
[2025-04-20 19:20:44] 2025-04-20 17:20:19,828 [wrapper] ==== wrapper stdout END ====
[2025-04-20 19:20:44] 2025-04-20 17:20:19,831 [wrapper] ==== wrapper stderr END ====
[2025-04-20 19:20:44]  *** Error codes and diagnostics ***
[2025-04-20 19:20:44]     "exeErrorCode": 0,
[2025-04-20 19:20:44]     "exeErrorDiag": "",
[2025-04-20 19:20:44]     "pilotErrorCode": 0,
[2025-04-20 19:20:44]     "pilotErrorDiag": "",
[2025-04-20 19:20:44]  *** Listing of results directory ***
[2025-04-20 19:20:44] total 416512
[2025-04-20 19:20:44] -rw-r--r-- 1 boinc boinc    495897 Apr 20 03:44 pilot3.tar.gz
[2025-04-20 19:20:44] -rw-r--r-- 1 boinc boinc      5111 Apr 20 03:59 queuedata.json
[2025-04-20 19:20:44] -rwx------ 1 boinc boinc     37140 Apr 20 04:01 runpilot2-wrapper.sh
[2025-04-20 19:20:44] -rw-r--r-- 1 boinc boinc       100 Apr 20 17:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-20 19:20:44] -rwxr-xr-x 1 boinc boinc      7986 Apr 20 17:41 run_atlas
[2025-04-20 19:20:44] -rw-r--r-- 1 boinc boinc       105 Apr 20 17:41 job.xml
[2025-04-20 19:20:44] -rw-r--r-- 2 boinc boinc 221713129 Apr 20 17:41 EVNT.44075481._003551.pool.root.1
[2025-04-20 19:20:44] -rw-r--r-- 1 boinc boinc      6684 Apr 20 17:41 init_data.xml
[2025-04-20 19:20:44] drwxrwx--x 2 boinc boinc      4096 Apr 20 17:41 shared
[2025-04-20 19:20:44] -rw-r--r-- 2 boinc boinc    508890 Apr 20 17:41 input.tar.gz
[2025-04-20 19:20:44] -rw-r--r-- 2 boinc boinc     17569 Apr 20 17:41 start_atlas.sh
[2025-04-20 19:20:44] -rw-r--r-- 1 boinc boinc         0 Apr 20 17:41 boinc_lockfile
[2025-04-20 19:20:44] -rw-r--r-- 1 boinc boinc      2578 Apr 20 17:41 pandaJob.out
[2025-04-20 19:20:44] -rw------- 1 boinc boinc       424 Apr 20 17:41 setup.sh.local
[2025-04-20 19:20:44] -rw------- 1 boinc boinc    991292 Apr 20 17:41 agis_schedconf.cvmfs.json
[2025-04-20 19:20:44] -rw------- 1 boinc boinc   1618536 Apr 20 17:41 agis_ddmendpoints.agis.ALL.json
[2025-04-20 19:20:44] drwx------ 4 boinc boinc      4096 Apr 20 17:41 pilot3
[2025-04-20 19:20:44] -rw------- 1 boinc boinc 199318110 Apr 20 19:19 HITS.44075483._091108.pool.root.1
[2025-04-20 19:20:44] -rw-r--r-- 1 boinc boinc       529 Apr 20 19:19 boinc_task_state.xml
[2025-04-20 19:20:44] -rw------- 1 boinc boinc      1019 Apr 20 19:19 memory_monitor_summary.json
[2025-04-20 19:20:44] -rw------- 1 boinc boinc        95 Apr 20 19:20 pilot_heartbeat.json
[2025-04-20 19:20:44] -rw------- 1 boinc boinc    238165 Apr 20 19:20 log.44075483._091108.job.log.tgz.1
[2025-04-20 19:20:44] -rw------- 1 boinc boinc      7669 Apr 20 19:20 heartbeat.json
[2025-04-20 19:20:44] -rw------- 1 boinc boinc      4480 Apr 20 19:20 pilotlog.txt
[2025-04-20 19:20:44] -rw------- 1 boinc boinc    566569 Apr 20 19:20 log.44075483._091108.job.log.1
[2025-04-20 19:20:44] -rw------- 1 boinc boinc       357 Apr 20 19:20 output.list
[2025-04-20 19:20:44] -rw-r--r-- 1 boinc boinc       620 Apr 20 19:20 runtime_log
[2025-04-20 19:20:44] -rw------- 1 boinc boinc    819200 Apr 20 19:20 result.tar.gz
[2025-04-20 19:20:44] -rw------- 1 boinc boinc       662 Apr 20 19:20 wdCMDmrAZQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmSNjLDmjG6WFo.diag
[2025-04-20 19:20:44] -rw-r--r-- 1 boinc boinc     11119 Apr 20 19:20 runtime_log.err
[2025-04-20 19:20:44] -rw-r--r-- 1 boinc boinc      8192 Apr 20 19:20 boinc_mmap_file
[2025-04-20 19:20:44] -rw-r--r-- 1 boinc boinc        27 Apr 20 19:20 wrapper_checkpoint.txt
[2025-04-20 19:20:44] -rw-r--r-- 1 boinc boinc     21806 Apr 20 19:20 stderr.txt
[2025-04-20 19:20:44] HITS file was successfully produced:
[2025-04-20 19:20:44] -rw------- 1 boinc boinc 199318110 Apr 20 19:19 shared/HITS.pool.root.1
[2025-04-20 19:20:44]  *** Contents of shared directory: ***
[2025-04-20 19:20:44] total 412496
[2025-04-20 19:20:44] -rw-r--r-- 2 boinc boinc 221713129 Apr 20 17:41 ATLAS.root_0
[2025-04-20 19:20:44] -rw-r--r-- 2 boinc boinc    508890 Apr 20 17:41 input.tar.gz
[2025-04-20 19:20:44] -rw-r--r-- 2 boinc boinc     17569 Apr 20 17:41 start_atlas.sh
[2025-04-20 19:20:44] -rw------- 1 boinc boinc 199318110 Apr 20 19:19 HITS.pool.root.1
[2025-04-20 19:20:44] -rw------- 1 boinc boinc    819200 Apr 20 19:20 result.tar.gz
19:20:46 (1879774): run_atlas exited; CPU time 15734.660651
19:20:46 (1879774): called boinc_finish(0)

</stderr_txt>
]]>

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