Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
16:18:36 (2513416): wrapper (7.7.26015): starting
16:18:36 (2513416): wrapper: running run_atlas (--nthreads 3)
[2025-04-20 16:18:36] Arguments: --nthreads 3
[2025-04-20 16:18:36] Threads: 3
[2025-04-20 16:18:36] Checking for CVMFS
[2025-04-20 16:18:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-20 16:18:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-20 16:18:36] Running cvmfs_config stat atlas.cern.ch
[2025-04-20 16:18:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-20 16:18:36] 2.9.2.0 1070177 4658 87556 145078 3 55 20895410 36864000 0 130560 0 3741663 99.992 1173789 6682 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-04-20 16:18:36] CVMFS is ok
[2025-04-20 16:18:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-20 16:18:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-20 16:18:36] Further information can be found at the LHC@home message board.
[2025-04-20 16:18:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-20 16:18:36] Checking for apptainer binary...
[2025-04-20 16:18:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-20 16:18:36] Running /usr/bin/apptainer --version
[2025-04-20 16:18:36] apptainer version 1.3.6-6.1
[2025-04-20 16:18:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-20 16:18:36] atlasA091
[2025-04-20 16:18:36] apptainer works
[2025-04-20 16:18:36] Set ATHENA_PROC_NUMBER=3
[2025-04-20 16:18:36] Set ATHENA_CORE_NUMBER=3
[2025-04-20 16:18:36] Starting ATLAS job with PandaID=6608465920
[2025-04-20 16:18:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-20 17:49:30]  *** The last 200 lines of the pilot log: ***
[2025-04-20 17:49:30]  lfn=log.44075483._090942.job.log.tgz.1
[2025-04-20 17:49:30]  mtime=0
[2025-04-20 17:49:30]  protocol_id=None
[2025-04-20 17:49:30]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-20 17:49:30]  replicas=None
[2025-04-20 17:49:30]  scope=mc23_13p6TeV
[2025-04-20 17:49:30]  status=None
[2025-04-20 17:49:30]  status_code=0
[2025-04-20 17:49:30]  storage_token=
[2025-04-20 17:49:30]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6608465920/log.44075483._090942.job.log.tgz.1
[2025-04-20 17:49:30]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/41/eb/log.44075483._090942.job.log.tgz.1
[2025-04-20 17:49:30]  workdir=None
[2025-04-20 17:49:30] ]
[2025-04-20 17:49:30] 2025-04-20 15:49:14,165 | INFO     | transferring file log.44075483._090942.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6608465920/log.44075483._090942.job.log.tgz.1 to /local/data/boinc/
[2025-04-20 17:49:30] 2025-04-20 15:49:14,165 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6608465920/log.44075483._090942.job.log.tgz.1 /local/data/boinc/slots/0/log.44075483._0909
[2025-04-20 17:49:30] 2025-04-20 15:49:14,178 | INFO     | adding to output.list: log.44075483._090942.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/41/eb/log.44075483._090942.job.log.tg
[2025-04-20 17:49:30] 2025-04-20 15:49:14,178 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-20 17:49:30] 2025-04-20 15:49:14,178 | INFO     | summary of transferred files:
[2025-04-20 17:49:30] 2025-04-20 15:49:14,178 | INFO     |  -- lfn=log.44075483._090942.job.log.tgz.1, status_code=0, status=transferred
[2025-04-20 17:49:30] 2025-04-20 15:49:14,178 | INFO     | stage-out finished correctly
[2025-04-20 17:49:30] 2025-04-20 15:49:14,680 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-20 17:49:30] 2025-04-20 15:49:15,043 | INFO     | job 6608465920 has state=finished
[2025-04-20 17:49:30] 2025-04-20 15:49:15,043 | INFO     | preparing for final server update for job 6608465920 in state='finished'
[2025-04-20 17:49:30] 2025-04-20 15:49:15,044 | INFO     | this job has now completed (state=finished)
[2025-04-20 17:49:30] 2025-04-20 15:49:15,044 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-20 17:49:30] 2025-04-20 15:49:15,044 | INFO     | log transfer has been attempted: DONE
[2025-04-20 17:49:30] 2025-04-20 15:49:15,044 | INFO     | job 6608465920 has finished - writing final server update
[2025-04-20 17:49:30] 2025-04-20 15:49:15,044 | INFO     | total number of processed events: 400 (read)
[2025-04-20 17:49:30] 2025-04-20 15:49:15,045 | INFO     | executing command: lscpu
[2025-04-20 17:49:30] 2025-04-20 15:49:15,061 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-20 17:49:30] 2025-04-20 15:49:17,513 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-20 17:49:30] 2025-04-20 15:49:17,513 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6608465920/memory_monitor_summary.json (trf name=prmon)
[2025-04-20 17:49:30] 2025-04-20 15:49:17,514 | INFO     | extracted standard info from prmon json
[2025-04-20 17:49:30] 2025-04-20 15:49:17,514 | INFO     | extracted standard memory fields from prmon json
[2025-04-20 17:49:30] 2025-04-20 15:49:17,514 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-20 17:49:30] 2025-04-20 15:49:17,514 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-20 17:49:30] 2025-04-20 15:49:17,514 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-20 17:49:30] 2025-04-20 15:49:17,515 | INFO     | fitting pss+swap vs Time
[2025-04-20 17:49:30] 2025-04-20 15:49:17,515 | INFO     | sum of square deviations: 170944600.5
[2025-04-20 17:49:30] 2025-04-20 15:49:17,515 | INFO     | sum of deviations: 940530939.9999957
[2025-04-20 17:49:30] 2025-04-20 15:49:17,515 | INFO     | mean x: 1745161517.5
[2025-04-20 17:49:30] 2025-04-20 15:49:17,515 | INFO     | mean y: 2497910.9024390243
[2025-04-20 17:49:30] 2025-04-20 15:49:17,515 | INFO     | -- intersect: -9599316932.650307
[2025-04-20 17:49:30] 2025-04-20 15:49:17,515 | INFO     | intersect: -9599316932.650307
[2025-04-20 17:49:30] 2025-04-20 15:49:17,515 | INFO     | chi2: 1.6283468881400964
[2025-04-20 17:49:30] 2025-04-20 15:49:17,515 | INFO     | -- intersect: -9599316932.650307
[2025-04-20 17:49:30] 2025-04-20 15:49:17,515 | INFO     | current memory leak: 5.50 B/s (using 82 data points, chi2=1.63)
[2025-04-20 17:49:30] 2025-04-20 15:49:17,515 | INFO     | ..............................
[2025-04-20 17:49:30] 2025-04-20 15:49:17,515 | INFO     | . Timing measurements:
[2025-04-20 17:49:30] 2025-04-20 15:49:17,515 | INFO     | . get job = 0 s
[2025-04-20 17:49:30] 2025-04-20 15:49:17,515 | INFO     | . initial setup = 1 s
[2025-04-20 17:49:30] 2025-04-20 15:49:17,515 | INFO     | . payload setup = 3 s
[2025-04-20 17:49:30] 2025-04-20 15:49:17,516 | INFO     | . stage-in = 0 s
[2025-04-20 17:49:30] 2025-04-20 15:49:17,516 | INFO     | . payload execution = 5411 s
[2025-04-20 17:49:30] 2025-04-20 15:49:17,516 | INFO     | . stage-out = 0 s
[2025-04-20 17:49:30] 2025-04-20 15:49:17,516 | INFO     | . log creation = 0 s
[2025-04-20 17:49:30] 2025-04-20 15:49:17,516 | INFO     | ..............................
[2025-04-20 17:49:30] 2025-04-20 15:49:17,547 | INFO     | 
[2025-04-20 17:49:30] 2025-04-20 15:49:17,547 | INFO     | job summary report
[2025-04-20 17:49:30] 2025-04-20 15:49:17,547 | INFO     | --------------------------------------------------
[2025-04-20 17:49:30] 2025-04-20 15:49:17,547 | INFO     | PanDA job id: 6608465920
[2025-04-20 17:49:30] 2025-04-20 15:49:17,547 | INFO     | task id: 44075483
[2025-04-20 17:49:30] 2025-04-20 15:49:17,547 | INFO     | errors: (none)
[2025-04-20 17:49:30] 2025-04-20 15:49:17,547 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-20 17:49:30] 2025-04-20 15:49:17,548 | INFO     | pilot state: finished 
[2025-04-20 17:49:30] 2025-04-20 15:49:17,548 | INFO     | transexitcode: 0
[2025-04-20 17:49:30] 2025-04-20 15:49:17,548 | INFO     | exeerrorcode: 0
[2025-04-20 17:49:30] 2025-04-20 15:49:17,548 | INFO     | exeerrordiag: 
[2025-04-20 17:49:30] 2025-04-20 15:49:17,548 | INFO     | exitcode: 0
[2025-04-20 17:49:30] 2025-04-20 15:49:17,548 | INFO     | exitmsg: OK
[2025-04-20 17:49:30] 2025-04-20 15:49:17,548 | INFO     | cpuconsumptiontime: 14340 s
[2025-04-20 17:49:30] 2025-04-20 15:49:17,548 | INFO     | nevents: 400
[2025-04-20 17:49:30] 2025-04-20 15:49:17,548 | INFO     | neventsw: 0
[2025-04-20 17:49:30] 2025-04-20 15:49:17,548 | INFO     | pid: 2523499
[2025-04-20 17:49:30] 2025-04-20 15:49:17,548 | INFO     | pgrp: 2523499
[2025-04-20 17:49:30] 2025-04-20 15:49:17,548 | INFO     | corecount: 3
[2025-04-20 17:49:30] 2025-04-20 15:49:17,548 | INFO     | event service: False
[2025-04-20 17:49:30] 2025-04-20 15:49:17,548 | INFO     | sizes: {0: 2426827, 3: 2427033, 11: 2427061, 5418: 2453637, 5419: 2462584, 5420: 2462640, 5422: 2462938}
[2025-04-20 17:49:30] 2025-04-20 15:49:17,548 | INFO     | --------------------------------------------------
[2025-04-20 17:49:30] 2025-04-20 15:49:17,548 | INFO     | 
[2025-04-20 17:49:30] 2025-04-20 15:49:17,548 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-04-20 17:49:30] 2025-04-20 15:49:17,560 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-20 17:49:30] 2025-04-20 15:49:17,561 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-20 17:49:30] 2025-04-20 15:49:17,561 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-20 17:49:30] 2025-04-20 15:49:17,561 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-20 17:49:30] 2025-04-20 15:49:17,561 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-20 17:49:30] 2025-04-20 15:49:17,561 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-20 17:49:30] 2025-04-20 15:49:17,561 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-20 17:49:30] 2025-04-20 15:49:17,561 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-20 17:49:30] 2025-04-20 15:49:17,561 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-20 17:49:30] 2025-04-20 15:49:17,561 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-20 17:49:30] 2025-04-20 15:49:17,561 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-20 17:49:30] 2025-04-20 15:49:17,561 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-20 17:49:30] 2025-04-20 15:49:17,561 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-20 17:49:30] 2025-04-20 15:49:17,561 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-20 17:49:30] 2025-04-20 15:49:17,561 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-20 17:49:30] 2025-04-20 15:49:17,561 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-20 17:49:30] 2025-04-20 15:49:17,561 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-20 17:49:30] 2025-04-20 15:49:17,561 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-20 17:49:30] 2025-04-20 15:49:17,561 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-20 17:49:30] 2025-04-20 15:49:17,561 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-20 17:49:30] 2025-04-20 15:49:17,561 | INFO     | job 6608465920 has completed (purged errors)
[2025-04-20 17:49:30] 2025-04-20 15:49:17,561 | INFO     | overall cleanup function is called
[2025-04-20 17:49:30] 2025-04-20 15:49:18,047 | WARNING  | process 2523499 can no longer be monitored (due to stat problems) - aborting
[2025-04-20 17:49:30] 2025-04-20 15:49:18,075 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-04-20 17:49:30] 2025-04-20 15:49:18,075 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-04-20 17:49:30] 2025-04-20 15:49:18,076 | INFO     | skipping file size check of payload stdout file (/local/data/boinc/slots/0/PanDA_Pilot-6608465920/payload.stdout) since it has not been created yet
[2025-04-20 17:49:30] 2025-04-20 15:49:18,076 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-04-20 17:49:30] 2025-04-20 15:49:18,087 | INFO     | sufficient remaining disk space (379629600768 B)
[2025-04-20 17:49:30] 2025-04-20 15:49:18,087 | WARNING  | skipping size check of workdir since it has not been created yet
[2025-04-20 17:49:30] 2025-04-20 15:49:18,087 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6608465920/HITS.44075483._090942.pool.root.1 since it does not exist
[2025-04-20 17:49:30] 2025-04-20 15:49:18,125 | INFO     | number of running child processes to parent process 2523499: 1
[2025-04-20 17:49:30] 2025-04-20 15:49:18,125 | INFO     | maximum number of monitored processes: 6
[2025-04-20 17:49:30] 2025-04-20 15:49:18,125 | INFO     | aborting job monitoring since job object (job id=6608465920) has expired
[2025-04-20 17:49:30] 2025-04-20 15:49:18,568 | INFO     | --- collectZombieJob: --- 10, [2523499]
[2025-04-20 17:49:30] 2025-04-20 15:49:18,568 | INFO     | zombie collector waiting for pid 2523499
[2025-04-20 17:49:30] 2025-04-20 15:49:18,568 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-20 17:49:30] 2025-04-20 15:49:18,568 | INFO     | collected zombie processes
[2025-04-20 17:49:30] 2025-04-20 15:49:18,568 | INFO     | will attempt to kill all subprocesses of pid=2523499
[2025-04-20 17:49:30] 2025-04-20 15:49:18,608 | INFO     | process IDs to be killed: [2523499] (in reverse order)
[2025-04-20 17:49:30] 2025-04-20 15:49:18,633 | WARNING  | found no corresponding commands to process id(s)
[2025-04-20 17:49:30] 2025-04-20 15:49:18,633 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-20 17:49:30] 2025-04-20 15:49:18,634 | INFO     | did not find any defunct processes belonging to 2523499
[2025-04-20 17:49:30] 2025-04-20 15:49:18,635 | INFO     | did not find any defunct processes belonging to 2523499
[2025-04-20 17:49:30] 2025-04-20 15:49:18,636 | INFO     | ready for new job
[2025-04-20 17:49:30] 2025-04-20 15:49:18,636 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-20 17:49:30] 2025-04-20 15:49:18,636 | INFO     | **************************************
[2025-04-20 17:49:30] 2025-04-20 15:49:18,636 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-20 17:49:30] 2025-04-20 15:49:18,636 | INFO     | **************************************
[2025-04-20 17:49:30] 2025-04-20 15:49:18,636 | INFO     | 
[2025-04-20 17:49:30] 2025-04-20 15:49:18,637 | INFO     | architecture information:
[2025-04-20 17:49:30] 2025-04-20 15:49:18,637 | INFO     | executing command: cat /etc/os-release
[2025-04-20 17:49:30] 2025-04-20 15:49:18,646 | INFO     | cat /etc/os-release:
[2025-04-20 17:49:30] NAME="CentOS Linux"
[2025-04-20 17:49:30] VERSION="7 (Core)"
[2025-04-20 17:49:30] ID="centos"
[2025-04-20 17:49:30] ID_LIKE="rhel fedora"
[2025-04-20 17:49:30] VERSION_ID="7"
[2025-04-20 17:49:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-20 17:49:30] ANSI_COLOR="0;31"
[2025-04-20 17:49:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-20 17:49:30] HOME_URL="https://www.centos.org/"
[2025-04-20 17:49:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-20 17:49:30] 
[2025-04-20 17:49:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-20 17:49:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-20 17:49:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-20 17:49:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-20 17:49:30] 
[2025-04-20 17:49:30] 2025-04-20 15:49:18,646 | INFO     | **************************************
[2025-04-20 17:49:30] 2025-04-20 15:49:19,150 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-04-20 17:49:30] 2025-04-20 15:49:19,163 | INFO     | sufficient remaining disk space (379629600768 B)
[2025-04-20 17:49:30] 2025-04-20 15:49:19,163 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-20 17:49:30] 2025-04-20 15:49:19,163 | INFO     | current server update state: UPDATING_FINAL
[2025-04-20 17:49:30] 2025-04-20 15:49:19,163 | INFO     | update_server=False
[2025-04-20 17:49:30] 2025-04-20 15:49:19,163 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-20 17:49:30] 2025-04-20 15:49:19,163 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-20 17:49:30] 2025-04-20 15:49:19,164 | INFO     | aborting loop
[2025-04-20 17:49:30] 2025-04-20 15:49:19,164 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-20 17:49:30] 2025-04-20 15:49:19,190 | INFO     | all payload control threads have been joined
[2025-04-20 17:49:30] 2025-04-20 15:49:19,460 | INFO     | found 0 job(s) in 20 queues
[2025-04-20 17:49:30] 2025-04-20 15:49:19,460 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-20 17:49:30] 2025-04-20 15:49:19,460 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-20 17:49:30] 2025-04-20 15:49:19,719 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-20 17:49:30] 2025-04-20 15:49:20,003 | INFO     | all data control threads have been joined
[2025-04-20 17:49:30] 2025-04-20 15:49:20,127 | INFO     | all job control threads have been joined
[2025-04-20 17:49:30] 2025-04-20 15:49:20,169 | INFO     | [job] job monitor thread has finished
[2025-04-20 17:49:30] 2025-04-20 15:49:20,169 | INFO     | [job] retrieve thread has finished
[2025-04-20 17:49:30] 2025-04-20 15:49:20,169 | INFO     | [job] queue monitor thread has finished
[2025-04-20 17:49:30] 2025-04-20 15:49:20,196 | INFO     | [payload] control thread has finished
[2025-04-20 17:49:30] 2025-04-20 15:49:20,408 | INFO     | [payload] failed_post thread has finished
[2025-04-20 17:49:30] 2025-04-20 15:49:20,455 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-20 17:49:30] 2025-04-20 15:49:20,547 | INFO     | [data] copytool_in thread has finished
[2025-04-20 17:49:30] 2025-04-20 15:49:20,718 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-20 17:49:30] 2025-04-20 15:49:20,885 | INFO     | [job] validate thread has finished
[2025-04-20 17:49:30] 2025-04-20 15:49:20,962 | INFO     | [payload] validate_pre thread has finished
[2025-04-20 17:49:30] 2025-04-20 15:49:21,005 | INFO     | [data] control thread has finished
[2025-04-20 17:49:30] 2025-04-20 15:49:21,127 | INFO     | [job] create_data_payload thread has finished
[2025-04-20 17:49:30] 2025-04-20 15:49:21,133 | INFO     | [job] control thread has finished
[2025-04-20 17:49:30] 2025-04-20 15:49:21,148 | INFO     | [payload] execute_payloads thread has finished
[2025-04-20 17:49:30] 2025-04-20 15:49:21,680 | INFO     | [payload] validate_post thread has finished
[2025-04-20 17:49:30] 2025-04-20 15:49:21,725 | INFO     | [data] copytool_out thread has finished
[2025-04-20 17:49:30] 2025-04-20 15:49:24,726 | INFO     | [data] queue_monitor thread has finished
[2025-04-20 17:49:30] 2025-04-20 15:49:25,625 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139985948854080)>', '<ExcThread(monitor, started 139985298634496)>']
[2025-04-20 17:49:30] 2025-04-20 15:49:26,497 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-20 17:49:30] 2025-04-20 15:49:26,498 | INFO     | [monitor] control thread has ended
[2025-04-20 17:49:30] 2025-04-20 15:49:30,641 | INFO     | all workflow threads have been joined
[2025-04-20 17:49:30] 2025-04-20 15:49:30,642 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-20 17:49:30] 2025-04-20 15:49:30,642 | INFO     | traces error code: 0
[2025-04-20 17:49:30] 2025-04-20 15:49:30,642 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-20 17:49:30] 2025-04-20 15:49:30,693 [wrapper] ==== pilot stdout END ====
[2025-04-20 17:49:30] 2025-04-20 15:49:30,695 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-20 17:49:30] 2025-04-20 15:49:30,698 [wrapper] pilotpid: 2517070
[2025-04-20 17:49:30] 2025-04-20 15:49:30,701 [wrapper] Pilot exit status: 0
[2025-04-20 17:49:30] 2025-04-20 15:49:30,709 [wrapper] pandaids: 6608465920
[2025-04-20 17:49:30] 2025-04-20 15:49:30,726 [wrapper] cleanup supervisor_pilot 2535546 2517071
[2025-04-20 17:49:30] 2025-04-20 15:49:30,728 [wrapper] Test setup, not cleaning
[2025-04-20 17:49:30] 2025-04-20 15:49:30,731 [wrapper] apfmon messages muted
[2025-04-20 17:49:30] 2025-04-20 15:49:30,733 [wrapper] ==== wrapper stdout END ====
[2025-04-20 17:49:30] 2025-04-20 15:49:30,736 [wrapper] ==== wrapper stderr END ====
[2025-04-20 17:49:30]  *** Error codes and diagnostics ***
[2025-04-20 17:49:30]     "exeErrorCode": 0,
[2025-04-20 17:49:30]     "exeErrorDiag": "",
[2025-04-20 17:49:30]     "pilotErrorCode": 0,
[2025-04-20 17:49:30]     "pilotErrorDiag": "",
[2025-04-20 17:49:30]  *** Listing of results directory ***
[2025-04-20 17:49:30] total 420684
[2025-04-20 17:49:30] -rw-r--r-- 1 boinc boinc    495897 Apr 20 03:44 pilot3.tar.gz
[2025-04-20 17:49:30] -rwx------ 1 boinc boinc     37140 Apr 20 03:45 runpilot2-wrapper.sh
[2025-04-20 17:49:30] -rw-r--r-- 1 boinc boinc      5111 Apr 20 03:45 queuedata.json
[2025-04-20 17:49:30] -rw-r--r-- 1 boinc boinc       100 Apr 20 16:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-20 17:49:30] -rwxr-xr-x 1 boinc boinc      7986 Apr 20 16:18 run_atlas
[2025-04-20 17:49:30] -rw-r--r-- 1 boinc boinc       105 Apr 20 16:18 job.xml
[2025-04-20 17:49:30] -rw-r--r-- 2 boinc boinc 225550350 Apr 20 16:18 EVNT.44075481._003542.pool.root.1
[2025-04-20 17:49:30] -rw-r--r-- 1 boinc boinc      6927 Apr 20 16:18 init_data.xml
[2025-04-20 17:49:30] drwxrwx--x 2 boinc boinc      4096 Apr 20 16:18 shared
[2025-04-20 17:49:30] -rw-r--r-- 2 boinc boinc    508885 Apr 20 16:18 input.tar.gz
[2025-04-20 17:49:30] -rw-r--r-- 2 boinc boinc     17569 Apr 20 16:18 start_atlas.sh
[2025-04-20 17:49:30] -rw-r--r-- 1 boinc boinc         0 Apr 20 16:18 boinc_lockfile
[2025-04-20 17:49:30] -rw-r--r-- 1 boinc boinc      2579 Apr 20 16:18 pandaJob.out
[2025-04-20 17:49:30] -rw------- 1 boinc boinc       424 Apr 20 16:18 setup.sh.local
[2025-04-20 17:49:30] -rw------- 1 boinc boinc    991292 Apr 20 16:18 agis_schedconf.cvmfs.json
[2025-04-20 17:49:30] -rw------- 1 boinc boinc   1618536 Apr 20 16:18 agis_ddmendpoints.agis.ALL.json
[2025-04-20 17:49:30] drwx------ 4 boinc boinc      4096 Apr 20 16:18 pilot3
[2025-04-20 17:49:30] -rw------- 1 boinc boinc 199818745 Apr 20 17:48 HITS.44075483._090942.pool.root.1
[2025-04-20 17:49:30] -rw-r--r-- 1 boinc boinc       529 Apr 20 17:49 boinc_task_state.xml
[2025-04-20 17:49:30] -rw------- 1 boinc boinc        95 Apr 20 17:49 pilot_heartbeat.json
[2025-04-20 17:49:30] -rw------- 1 boinc boinc      1018 Apr 20 17:49 memory_monitor_summary.json
[2025-04-20 17:49:30] -rw------- 1 boinc boinc    243097 Apr 20 17:49 log.44075483._090942.job.log.tgz.1
[2025-04-20 17:49:30] -rw------- 1 boinc boinc      7656 Apr 20 17:49 heartbeat.json
[2025-04-20 17:49:30] -rw-r--r-- 1 boinc boinc      8192 Apr 20 17:49 boinc_mmap_file
[2025-04-20 17:49:30] -rw-r--r-- 1 boinc boinc        27 Apr 20 17:49 wrapper_checkpoint.txt
[2025-04-20 17:49:30] -rw------- 1 boinc boinc      4357 Apr 20 17:49 pilotlog.txt
[2025-04-20 17:49:30] -rw------- 1 boinc boinc    525196 Apr 20 17:49 log.44075483._090942.job.log.1
[2025-04-20 17:49:30] -rw------- 1 boinc boinc       357 Apr 20 17:49 output.list
[2025-04-20 17:49:30] -rw-r--r-- 1 boinc boinc       620 Apr 20 17:49 runtime_log
[2025-04-20 17:49:30] -rw------- 1 boinc boinc    788480 Apr 20 17:49 result.tar.gz
[2025-04-20 17:49:30] -rw-r--r-- 1 boinc boinc     11114 Apr 20 17:49 runtime_log.err
[2025-04-20 17:49:30] -rw------- 1 boinc boinc       661 Apr 20 17:49 UbNODmjvYQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmXLjLDmrJjmQm.diag
[2025-04-20 17:49:30] -rw-r--r-- 1 boinc boinc     21721 Apr 20 17:49 stderr.txt
[2025-04-20 17:49:30] HITS file was successfully produced:
[2025-04-20 17:49:30] -rw------- 1 boinc boinc 199818745 Apr 20 17:48 shared/HITS.pool.root.1
[2025-04-20 17:49:30]  *** Contents of shared directory: ***
[2025-04-20 17:49:30] total 416704
[2025-04-20 17:49:30] -rw-r--r-- 2 boinc boinc 225550350 Apr 20 16:18 ATLAS.root_0
[2025-04-20 17:49:30] -rw-r--r-- 2 boinc boinc    508885 Apr 20 16:18 input.tar.gz
[2025-04-20 17:49:30] -rw-r--r-- 2 boinc boinc     17569 Apr 20 16:18 start_atlas.sh
[2025-04-20 17:49:30] -rw------- 1 boinc boinc 199818745 Apr 20 17:48 HITS.pool.root.1
[2025-04-20 17:49:30] -rw------- 1 boinc boinc    788480 Apr 20 17:49 result.tar.gz
17:49:32 (2513416): run_atlas exited; CPU time 14357.986389
17:49:32 (2513416): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN