Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:40:07 (556756): wrapper (7.7.26015): starting
09:40:07 (556756): wrapper: running run_atlas (--nthreads 12)
[2025-04-20 09:40:07] Arguments: --nthreads 12
[2025-04-20 09:40:07] Threads: 12
[2025-04-20 09:40:07] Checking for CVMFS
[2025-04-20 09:40:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-20 09:40:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-20 09:40:07] Running cvmfs_config stat atlas.cern.ch
[2025-04-20 09:40:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-20 09:40:07] 2.12.7.0 3563 878 58424 145066 3 60 3827022 4096001 0 130560 0 1279962 99.988 321279 2151 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-04-20 09:40:07] CVMFS is ok
[2025-04-20 09:40:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-20 09:40:07] Small home clusters do not require a local http proxy but it is suggested if
[2025-04-20 09:40:07] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-04-20 09:40:07] Further information can be found at the LHC@home message board.
[2025-04-20 09:40:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-20 09:40:07] Checking for apptainer binary...
[2025-04-20 09:40:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-20 09:40:07] Running /usr/bin/apptainer --version
[2025-04-20 09:40:08] apptainer version 1.3.6
[2025-04-20 09:40:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-20 09:40:08] subzero
[2025-04-20 09:40:08] apptainer works
[2025-04-20 09:40:08] Set ATHENA_PROC_NUMBER=12
[2025-04-20 09:40:08] Set ATHENA_CORE_NUMBER=12
[2025-04-20 09:40:08] Starting ATLAS job with PandaID=6608357310
[2025-04-20 09:40:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/david/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-20 10:26:40]  *** The last 200 lines of the pilot log: ***
[2025-04-20 10:26:40]  guid=26911e58-cf50-4cfc-905a-f513a658b05c
[2025-04-20 10:26:40]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-20 10:26:40]  is_altstaged=None
[2025-04-20 10:26:40]  is_tar=False
[2025-04-20 10:26:40]  lfn=log.44075483._090236.job.log.tgz.1
[2025-04-20 10:26:40]  mtime=0
[2025-04-20 10:26:40]  protocol_id=None
[2025-04-20 10:26:40]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-20 10:26:40]  replicas=None
[2025-04-20 10:26:40]  scope=mc23_13p6TeV
[2025-04-20 10:26:40]  status=None
[2025-04-20 10:26:40]  status_code=0
[2025-04-20 10:26:40]  storage_token=
[2025-04-20 10:26:40]  surl=/home/david/boinc/slots/0/PanDA_Pilot-6608357310/log.44075483._090236.job.log.tgz.1
[2025-04-20 10:26:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/41/9e/log.44075483._090236.job.log.tgz.1
[2025-04-20 10:26:40]  workdir=None
[2025-04-20 10:26:40] ]
[2025-04-20 10:26:40] 2025-04-20 08:26:24,997 | INFO     | transferring file log.44075483._090236.job.log.tgz.1 from /home/david/boinc/slots/0/PanDA_Pilot-6608357310/log.44075483._090236.job.log.tgz.1 to /home/david/boinc/
[2025-04-20 10:26:40] 2025-04-20 08:26:24,998 | INFO     | executing command: /usr/bin/env mv /home/david/boinc/slots/0/PanDA_Pilot-6608357310/log.44075483._090236.job.log.tgz.1 /home/david/boinc/slots/0/log.44075483._0902
[2025-04-20 10:26:40] 2025-04-20 08:26:25,006 | INFO     | adding to output.list: log.44075483._090236.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/41/9e/log.44075483._090236.job.log.tg
[2025-04-20 10:26:40] 2025-04-20 08:26:25,007 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-20 10:26:40] 2025-04-20 08:26:25,007 | INFO     | summary of transferred files:
[2025-04-20 10:26:40] 2025-04-20 08:26:25,007 | INFO     |  -- lfn=log.44075483._090236.job.log.tgz.1, status_code=0, status=transferred
[2025-04-20 10:26:40] 2025-04-20 08:26:25,007 | INFO     | stage-out finished correctly
[2025-04-20 10:26:40] 2025-04-20 08:26:25,043 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-20 10:26:40] 2025-04-20 08:26:26,879 | INFO     | job 6608357310 has state=finished
[2025-04-20 10:26:40] 2025-04-20 08:26:26,879 | INFO     | preparing for final server update for job 6608357310 in state='finished'
[2025-04-20 10:26:40] 2025-04-20 08:26:26,880 | INFO     | this job has now completed (state=finished)
[2025-04-20 10:26:40] 2025-04-20 08:26:26,880 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-20 10:26:40] 2025-04-20 08:26:26,880 | INFO     | log transfer has been attempted: DONE
[2025-04-20 10:26:40] 2025-04-20 08:26:26,880 | INFO     | job 6608357310 has finished - writing final server update
[2025-04-20 10:26:40] 2025-04-20 08:26:26,880 | INFO     | total number of processed events: 400 (read)
[2025-04-20 10:26:40] 2025-04-20 08:26:26,881 | INFO     | executing command: lscpu
[2025-04-20 10:26:40] 2025-04-20 08:26:26,896 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-20 10:26:40] 2025-04-20 08:26:28,726 | WARNING  | process 567012 can no longer be monitored (due to stat problems) - aborting
[2025-04-20 10:26:40] 2025-04-20 08:26:28,726 | INFO     | using path: /home/david/boinc/slots/0/PanDA_Pilot-6608357310/memory_monitor_summary.json (trf name=prmon)
[2025-04-20 10:26:40] 2025-04-20 08:26:28,740 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-20 10:26:40] 2025-04-20 08:26:28,740 | INFO     | using path: /home/david/boinc/slots/0/PanDA_Pilot-6608357310/memory_monitor_summary.json (trf name=prmon)
[2025-04-20 10:26:40] 2025-04-20 08:26:28,740 | INFO     | extracted standard info from prmon json
[2025-04-20 10:26:40] 2025-04-20 08:26:28,740 | INFO     | extracted standard memory fields from prmon json
[2025-04-20 10:26:40] 2025-04-20 08:26:28,740 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-20 10:26:40] 2025-04-20 08:26:28,741 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-20 10:26:40] 2025-04-20 08:26:28,741 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-20 10:26:40] 2025-04-20 08:26:28,741 | INFO     | fitting pss+swap vs Time
[2025-04-20 10:26:40] 2025-04-20 08:26:28,741 | INFO     | sum of square deviations: 18381740.0
[2025-04-20 10:26:40] 2025-04-20 08:26:28,742 | INFO     | sum of deviations: 9960809438.000002
[2025-04-20 10:26:40] 2025-04-20 08:26:28,742 | INFO     | mean x: 1745136295.0
[2025-04-20 10:26:40] 2025-04-20 08:26:28,742 | INFO     | mean y: 2862458.3846153845
[2025-04-20 10:26:40] 2025-04-20 08:26:28,742 | INFO     | -- intersect: -945662242032.9397
[2025-04-20 10:26:40] 2025-04-20 08:26:28,742 | INFO     | intersect: -945662242032.9397
[2025-04-20 10:26:40] 2025-04-20 08:26:28,742 | INFO     | chi2: 1.2283361323115287
[2025-04-20 10:26:40] 2025-04-20 08:26:28,742 | INFO     | -- intersect: -945662242032.9397
[2025-04-20 10:26:40] 2025-04-20 08:26:28,742 | INFO     | current memory leak: 541.89 B/s (using 39 data points, chi2=1.23)
[2025-04-20 10:26:40] 2025-04-20 08:26:28,743 | INFO     | ..............................
[2025-04-20 10:26:40] 2025-04-20 08:26:28,743 | INFO     | . Timing measurements:
[2025-04-20 10:26:40] 2025-04-20 08:26:28,743 | INFO     | . get job = 0 s
[2025-04-20 10:26:40] 2025-04-20 08:26:28,743 | INFO     | . initial setup = 1 s
[2025-04-20 10:26:40] 2025-04-20 08:26:28,743 | INFO     | . payload setup = 2 s
[2025-04-20 10:26:40] 2025-04-20 08:26:28,743 | INFO     | . stage-in = 0 s
[2025-04-20 10:26:40] 2025-04-20 08:26:28,743 | INFO     | . payload execution = 2752 s
[2025-04-20 10:26:40] 2025-04-20 08:26:28,743 | INFO     | . stage-out = 0 s
[2025-04-20 10:26:40] 2025-04-20 08:26:28,743 | INFO     | . log creation = 0 s
[2025-04-20 10:26:40] 2025-04-20 08:26:28,743 | INFO     | ..............................
[2025-04-20 10:26:40] 2025-04-20 08:26:28,782 | INFO     | 
[2025-04-20 10:26:40] 2025-04-20 08:26:28,782 | INFO     | job summary report
[2025-04-20 10:26:40] 2025-04-20 08:26:28,782 | INFO     | --------------------------------------------------
[2025-04-20 10:26:40] 2025-04-20 08:26:28,782 | INFO     | PanDA job id: 6608357310
[2025-04-20 10:26:40] 2025-04-20 08:26:28,782 | INFO     | task id: 44075483
[2025-04-20 10:26:40] 2025-04-20 08:26:28,782 | INFO     | errors: (none)
[2025-04-20 10:26:40] 2025-04-20 08:26:28,782 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-20 10:26:40] 2025-04-20 08:26:28,782 | INFO     | pilot state: finished 
[2025-04-20 10:26:40] 2025-04-20 08:26:28,782 | INFO     | transexitcode: 0
[2025-04-20 10:26:40] 2025-04-20 08:26:28,782 | INFO     | exeerrorcode: 0
[2025-04-20 10:26:40] 2025-04-20 08:26:28,783 | INFO     | exeerrordiag: 
[2025-04-20 10:26:40] 2025-04-20 08:26:28,783 | INFO     | exitcode: 0
[2025-04-20 10:26:40] 2025-04-20 08:26:28,783 | INFO     | exitmsg: OK
[2025-04-20 10:26:40] 2025-04-20 08:26:28,783 | INFO     | cpuconsumptiontime: 24093 s
[2025-04-20 10:26:40] 2025-04-20 08:26:28,783 | INFO     | nevents: 400
[2025-04-20 10:26:40] 2025-04-20 08:26:28,783 | INFO     | neventsw: 0
[2025-04-20 10:26:40] 2025-04-20 08:26:28,783 | INFO     | pid: 567012
[2025-04-20 10:26:40] 2025-04-20 08:26:28,783 | INFO     | pgrp: 567012
[2025-04-20 10:26:40] 2025-04-20 08:26:28,783 | INFO     | corecount: 12
[2025-04-20 10:26:40] 2025-04-20 08:26:28,783 | INFO     | event service: False
[2025-04-20 10:26:40] 2025-04-20 08:26:28,783 | INFO     | sizes: {0: 2425996, 1: 2426855, 3: 2427061, 11: 2427089, 2758: 2452420, 2759: 2461550, 2763: 2461664}
[2025-04-20 10:26:40] 2025-04-20 08:26:28,784 | INFO     | --------------------------------------------------
[2025-04-20 10:26:40] 2025-04-20 08:26:28,784 | INFO     | 
[2025-04-20 10:26:40] 2025-04-20 08:26:28,784 | INFO     | executing command: ls -lF /home/david/boinc/slots/0
[2025-04-20 10:26:40] 2025-04-20 08:26:28,794 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-20 10:26:40] 2025-04-20 08:26:28,794 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-20 10:26:40] 2025-04-20 08:26:28,794 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-20 10:26:40] 2025-04-20 08:26:28,794 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-20 10:26:40] 2025-04-20 08:26:28,794 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-20 10:26:40] 2025-04-20 08:26:28,794 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-20 10:26:40] 2025-04-20 08:26:28,794 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-20 10:26:40] 2025-04-20 08:26:28,794 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-20 10:26:40] 2025-04-20 08:26:28,794 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-20 10:26:40] 2025-04-20 08:26:28,795 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-20 10:26:40] 2025-04-20 08:26:28,795 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-20 10:26:40] 2025-04-20 08:26:28,795 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-20 10:26:40] 2025-04-20 08:26:28,795 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-20 10:26:40] 2025-04-20 08:26:28,795 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-20 10:26:40] 2025-04-20 08:26:28,795 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-20 10:26:40] 2025-04-20 08:26:28,795 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-20 10:26:40] 2025-04-20 08:26:28,795 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-20 10:26:40] 2025-04-20 08:26:28,795 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-20 10:26:40] 2025-04-20 08:26:28,795 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-20 10:26:40] 2025-04-20 08:26:28,795 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-20 10:26:40] 2025-04-20 08:26:28,795 | INFO     | job 6608357310 has completed (purged errors)
[2025-04-20 10:26:40] 2025-04-20 08:26:28,796 | INFO     | overall cleanup function is called
[2025-04-20 10:26:40] 2025-04-20 08:26:28,853 | INFO     | number of running child processes to parent process 567012: 1
[2025-04-20 10:26:40] 2025-04-20 08:26:28,853 | INFO     | maximum number of monitored processes: 6
[2025-04-20 10:26:40] 2025-04-20 08:26:28,853 | INFO     | aborting job monitoring since job object (job id=6608357310) has expired
[2025-04-20 10:26:40] 2025-04-20 08:26:29,803 | INFO     | --- collectZombieJob: --- 10, [567012]
[2025-04-20 10:26:40] 2025-04-20 08:26:29,804 | INFO     | zombie collector waiting for pid 567012
[2025-04-20 10:26:40] 2025-04-20 08:26:29,804 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-20 10:26:40] 2025-04-20 08:26:29,804 | INFO     | collected zombie processes
[2025-04-20 10:26:40] 2025-04-20 08:26:29,804 | INFO     | will attempt to kill all subprocesses of pid=567012
[2025-04-20 10:26:40] 2025-04-20 08:26:29,881 | INFO     | process IDs to be killed: [567012] (in reverse order)
[2025-04-20 10:26:40] 2025-04-20 08:26:29,907 | WARNING  | found no corresponding commands to process id(s)
[2025-04-20 10:26:40] 2025-04-20 08:26:29,907 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-20 10:26:40] 2025-04-20 08:26:29,908 | INFO     | did not find any defunct processes belonging to 567012
[2025-04-20 10:26:40] 2025-04-20 08:26:29,910 | INFO     | did not find any defunct processes belonging to 567012
[2025-04-20 10:26:40] 2025-04-20 08:26:29,910 | INFO     | ready for new job
[2025-04-20 10:26:40] 2025-04-20 08:26:29,910 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-20 10:26:40] 2025-04-20 08:26:29,911 | INFO     | **************************************
[2025-04-20 10:26:40] 2025-04-20 08:26:29,911 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-20 10:26:40] 2025-04-20 08:26:29,911 | INFO     | **************************************
[2025-04-20 10:26:40] 2025-04-20 08:26:29,911 | INFO     | 
[2025-04-20 10:26:40] 2025-04-20 08:26:29,912 | INFO     | architecture information:
[2025-04-20 10:26:40] 2025-04-20 08:26:29,912 | INFO     | executing command: cat /etc/os-release
[2025-04-20 10:26:40] 2025-04-20 08:26:29,918 | INFO     | cat /etc/os-release:
[2025-04-20 10:26:40] NAME="CentOS Linux"
[2025-04-20 10:26:40] VERSION="7 (Core)"
[2025-04-20 10:26:40] ID="centos"
[2025-04-20 10:26:40] ID_LIKE="rhel fedora"
[2025-04-20 10:26:40] VERSION_ID="7"
[2025-04-20 10:26:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-20 10:26:40] ANSI_COLOR="0;31"
[2025-04-20 10:26:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-20 10:26:40] HOME_URL="https://www.centos.org/"
[2025-04-20 10:26:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-20 10:26:40] 
[2025-04-20 10:26:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-20 10:26:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-20 10:26:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-20 10:26:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-20 10:26:40] 
[2025-04-20 10:26:40] 2025-04-20 08:26:29,918 | INFO     | **************************************
[2025-04-20 10:26:40] 2025-04-20 08:26:30,420 | INFO     | executing command: df -mP /home/david/boinc/slots/0
[2025-04-20 10:26:40] 2025-04-20 08:26:30,428 | INFO     | sufficient remaining disk space (238252195840 B)
[2025-04-20 10:26:40] 2025-04-20 08:26:30,428 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-20 10:26:40] 2025-04-20 08:26:30,428 | INFO     | current server update state: UPDATING_FINAL
[2025-04-20 10:26:40] 2025-04-20 08:26:30,428 | INFO     | update_server=False
[2025-04-20 10:26:40] 2025-04-20 08:26:30,428 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-20 10:26:40] 2025-04-20 08:26:30,428 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-20 10:26:40] 2025-04-20 08:26:30,428 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-20 10:26:40] 2025-04-20 08:26:30,428 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-20 10:26:40] 2025-04-20 08:26:30,429 | INFO     | aborting loop
[2025-04-20 10:26:40] 2025-04-20 08:26:30,429 | INFO     | found 0 job(s) in 20 queues
[2025-04-20 10:26:40] 2025-04-20 08:26:30,429 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-20 10:26:40] 2025-04-20 08:26:30,429 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-20 10:26:40] 2025-04-20 08:26:30,489 | INFO     | all data control threads have been joined
[2025-04-20 10:26:40] 2025-04-20 08:26:30,549 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-20 10:26:40] 2025-04-20 08:26:30,779 | INFO     | all job control threads have been joined
[2025-04-20 10:26:40] 2025-04-20 08:26:30,863 | INFO     | job.realtimelogging is not enabled
[2025-04-20 10:26:40] 2025-04-20 08:26:31,083 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-20 10:26:40] 2025-04-20 08:26:31,385 | INFO     | all payload control threads have been joined
[2025-04-20 10:26:40] 2025-04-20 08:26:31,430 | INFO     | [job] queue monitor thread has finished
[2025-04-20 10:26:40] 2025-04-20 08:26:31,433 | INFO     | [job] retrieve thread has finished
[2025-04-20 10:26:40] 2025-04-20 08:26:31,434 | INFO     | [job] job monitor thread has finished
[2025-04-20 10:26:40] 2025-04-20 08:26:31,440 | INFO     | [payload] execute_payloads thread has finished
[2025-04-20 10:26:40] 2025-04-20 08:26:31,494 | INFO     | [data] control thread has finished
[2025-04-20 10:26:40] 2025-04-20 08:26:31,655 | INFO     | [payload] failed_post thread has finished
[2025-04-20 10:26:40] 2025-04-20 08:26:31,784 | INFO     | [job] control thread has finished
[2025-04-20 10:26:40] 2025-04-20 08:26:31,868 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-20 10:26:40] 2025-04-20 08:26:32,089 | INFO     | [payload] validate_post thread has finished
[2025-04-20 10:26:40] 2025-04-20 08:26:32,324 | INFO     | [job] create_data_payload thread has finished
[2025-04-20 10:26:40] 2025-04-20 08:26:32,364 | INFO     | [job] validate thread has finished
[2025-04-20 10:26:40] 2025-04-20 08:26:32,390 | INFO     | [payload] control thread has finished
[2025-04-20 10:26:40] 2025-04-20 08:26:32,460 | INFO     | [payload] validate_pre thread has finished
[2025-04-20 10:26:40] 2025-04-20 08:26:32,555 | INFO     | [data] copytool_out thread has finished
[2025-04-20 10:26:40] 2025-04-20 08:26:32,932 | INFO     | [data] copytool_in thread has finished
[2025-04-20 10:26:40] 2025-04-20 08:26:35,088 | INFO     | [data] queue_monitor thread has finished
[2025-04-20 10:26:40] 2025-04-20 08:26:35,753 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140001662048064)>', '<ExcThread(monitor, started 140001390073600)>']
[2025-04-20 10:26:40] 2025-04-20 08:26:36,457 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-20 10:26:40] 2025-04-20 08:26:36,457 | INFO     | [monitor] control thread has ended
[2025-04-20 10:26:40] 2025-04-20 08:26:40,778 | INFO     | all workflow threads have been joined
[2025-04-20 10:26:40] 2025-04-20 08:26:40,778 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-20 10:26:40] 2025-04-20 08:26:40,778 | INFO     | traces error code: 0
[2025-04-20 10:26:40] 2025-04-20 08:26:40,778 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-20 10:26:40] 2025-04-20 08:26:40,823 [wrapper] ==== pilot stdout END ====
[2025-04-20 10:26:40] 2025-04-20 08:26:40,825 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-20 10:26:40] 2025-04-20 08:26:40,826 [wrapper] pilotpid: 560449
[2025-04-20 10:26:40] 2025-04-20 08:26:40,828 [wrapper] Pilot exit status: 0
[2025-04-20 10:26:40] 2025-04-20 08:26:40,833 [wrapper] pandaids: 6608357310
[2025-04-20 10:26:40] 2025-04-20 08:26:40,850 [wrapper] cleanup supervisor_pilot  579652 560450
[2025-04-20 10:26:40] 2025-04-20 08:26:40,851 [wrapper] Test setup, not cleaning
[2025-04-20 10:26:40] 2025-04-20 08:26:40,853 [wrapper] apfmon messages muted
[2025-04-20 10:26:40] 2025-04-20 08:26:40,854 [wrapper] ==== wrapper stdout END ====
[2025-04-20 10:26:40] 2025-04-20 08:26:40,855 [wrapper] ==== wrapper stderr END ====
[2025-04-20 10:26:40]  *** Error codes and diagnostics ***
[2025-04-20 10:26:40]     "exeErrorCode": 0,
[2025-04-20 10:26:40]     "exeErrorDiag": "",
[2025-04-20 10:26:40]     "pilotErrorCode": 0,
[2025-04-20 10:26:40]     "pilotErrorDiag": "",
[2025-04-20 10:26:40]  *** Listing of results directory ***
[2025-04-20 10:26:40] total 417204
[2025-04-20 10:26:40] -rw-r--r-- 1 david david      5111 Apr 20 02:43 queuedata.json
[2025-04-20 10:26:40] -rw-r--r-- 1 david david    495897 Apr 20 02:43 pilot3.tar.gz
[2025-04-20 10:26:40] -rwx------ 1 david david     37140 Apr 20 02:44 runpilot2-wrapper.sh
[2025-04-20 10:26:40] -rw-r--r-- 1 david david       100 Apr 20 09:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-20 10:26:40] -rwxr-xr-x 1 david david      7986 Apr 20 09:40 run_atlas
[2025-04-20 10:26:40] -rw-r--r-- 1 david david       105 Apr 20 09:40 job.xml
[2025-04-20 10:26:40] -rw-r--r-- 2 david david     17569 Apr 20 09:40 start_atlas.sh
[2025-04-20 10:26:40] drwxrwx--x 1 david david        76 Apr 20 09:40 shared
[2025-04-20 10:26:40] -rw-r--r-- 2 david david    508893 Apr 20 09:40 input.tar.gz
[2025-04-20 10:26:40] -rw-r--r-- 1 david david      7526 Apr 20 09:40 init_data.xml
[2025-04-20 10:26:40] -rw-r--r-- 2 david david 226345650 Apr 20 09:40 EVNT.44075481._003517.pool.root.1
[2025-04-20 10:26:40] -rw-r--r-- 1 david david         0 Apr 20 09:40 boinc_setup_complete
[2025-04-20 10:26:40] -rw-r--r-- 1 david david         0 Apr 20 09:40 boinc_lockfile
[2025-04-20 10:26:40] -rw-r--r-- 1 david david      2579 Apr 20 09:40 pandaJob.out
[2025-04-20 10:26:40] -rw------- 1 david david       424 Apr 20 09:40 setup.sh.local
[2025-04-20 10:26:40] -rw------- 1 david david    991292 Apr 20 09:40 agis_schedconf.cvmfs.json
[2025-04-20 10:26:40] -rw------- 1 david david   1618536 Apr 20 09:40 agis_ddmendpoints.agis.ALL.json
[2025-04-20 10:26:40] drwx------ 1 david david       368 Apr 20 09:40 pilot3
[2025-04-20 10:26:40] -rw------- 1 david david        95 Apr 20 10:25 pilot_heartbeat.json
[2025-04-20 10:26:40] -rw------- 1 david david 195761191 Apr 20 10:26 HITS.44075483._090236.pool.root.1
[2025-04-20 10:26:40] -rw-r--r-- 1 david david       530 Apr 20 10:26 boinc_task_state.xml
[2025-04-20 10:26:40] -rw------- 1 david david      1019 Apr 20 10:26 memory_monitor_summary.json
[2025-04-20 10:26:40] -rw------- 1 david david    334119 Apr 20 10:26 log.44075483._090236.job.log.tgz.1
[2025-04-20 10:26:40] -rw------- 1 david david      7658 Apr 20 10:26 heartbeat.json
[2025-04-20 10:26:40] -rw-r--r-- 1 david david      8192 Apr 20 10:26 boinc_mmap_file
[2025-04-20 10:26:40] -rw-r--r-- 1 david david        27 Apr 20 10:26 wrapper_checkpoint.txt
[2025-04-20 10:26:40] -rw------- 1 david david      4552 Apr 20 10:26 pilotlog.txt
[2025-04-20 10:26:40] -rw------- 1 david david    295793 Apr 20 10:26 log.44075483._090236.job.log.1
[2025-04-20 10:26:40] -rw------- 1 david david       357 Apr 20 10:26 output.list
[2025-04-20 10:26:40] -rw-r--r-- 1 david david       620 Apr 20 10:26 runtime_log
[2025-04-20 10:26:40] -rw------- 1 david david    645120 Apr 20 10:26 result.tar.gz
[2025-04-20 10:26:40] -rw-r--r-- 1 david david     11014 Apr 20 10:26 runtime_log.err
[2025-04-20 10:26:40] -rw------- 1 david david       637 Apr 20 10:26 aFQNDm9xXQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmRFjLDma14cem.diag
[2025-04-20 10:26:40] -rw-r--r-- 1 david david     21353 Apr 20 10:26 stderr.txt
[2025-04-20 10:26:40] HITS file was successfully produced:
[2025-04-20 10:26:40] -rw------- 1 david david 195761191 Apr 20 10:26 shared/HITS.pool.root.1
[2025-04-20 10:26:40]  *** Contents of shared directory: ***
[2025-04-20 10:26:40] total 413372
[2025-04-20 10:26:40] -rw-r--r-- 2 david david     17569 Apr 20 09:40 start_atlas.sh
[2025-04-20 10:26:40] -rw-r--r-- 2 david david    508893 Apr 20 09:40 input.tar.gz
[2025-04-20 10:26:40] -rw-r--r-- 2 david david 226345650 Apr 20 09:40 ATLAS.root_0
[2025-04-20 10:26:40] -rw------- 1 david david 195761191 Apr 20 10:26 HITS.pool.root.1
[2025-04-20 10:26:40] -rw------- 1 david david    645120 Apr 20 10:26 result.tar.gz
10:26:42 (556756): run_atlas exited; CPU time 24115.345788
10:26:42 (556756): called boinc_finish(0)

</stderr_txt>
]]>

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