Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:53:25 (531659): wrapper (7.7.26015): starting
08:53:25 (531659): wrapper: running run_atlas (--nthreads 12)
[2025-04-20 08:53:25] Arguments: --nthreads 12
[2025-04-20 08:53:25] Threads: 12
[2025-04-20 08:53:25] Checking for CVMFS
[2025-04-20 08:53:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-20 08:53:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-20 08:53:25] Running cvmfs_config stat atlas.cern.ch
[2025-04-20 08:53:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-20 08:53:26] 2.12.7.0 3563 831 57572 145064 2 56 3823430 4096001 0 130560 0 1221500 99.988 320032 2166 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-04-20 08:53:26] CVMFS is ok
[2025-04-20 08:53:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-20 08:53:26] Small home clusters do not require a local http proxy but it is suggested if
[2025-04-20 08:53:26] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-04-20 08:53:26] Further information can be found at the LHC@home message board.
[2025-04-20 08:53:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-20 08:53:26] Checking for apptainer binary...
[2025-04-20 08:53:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-20 08:53:26] Running /usr/bin/apptainer --version
[2025-04-20 08:53:26] apptainer version 1.3.6
[2025-04-20 08:53:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-20 08:53:26] subzero
[2025-04-20 08:53:26] apptainer works
[2025-04-20 08:53:26] Set ATHENA_PROC_NUMBER=12
[2025-04-20 08:53:26] Set ATHENA_CORE_NUMBER=12
[2025-04-20 08:53:26] Starting ATLAS job with PandaID=6608357232
[2025-04-20 08:53:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/david/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-20 09:40:02]  *** The last 200 lines of the pilot log: ***
[2025-04-20 09:40:02]  domain=
[2025-04-20 09:40:02]  filesize=328976
[2025-04-20 09:40:02]  filetype=log
[2025-04-20 09:40:02]  guid=5bec3899-ff65-468e-8cec-e97292634233
[2025-04-20 09:40:02]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-20 09:40:02]  is_altstaged=None
[2025-04-20 09:40:02]  is_tar=False
[2025-04-20 09:40:02]  lfn=log.44075483._090158.job.log.tgz.1
[2025-04-20 09:40:02]  mtime=0
[2025-04-20 09:40:02]  protocol_id=None
[2025-04-20 09:40:02]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-20 09:40:02]  replicas=None
[2025-04-20 09:40:02]  scope=mc23_13p6TeV
[2025-04-20 09:40:02]  status=None
[2025-04-20 09:40:02]  status_code=0
[2025-04-20 09:40:02]  storage_token=
[2025-04-20 09:40:02]  surl=/home/david/boinc/slots/0/PanDA_Pilot-6608357232/log.44075483._090158.job.log.tgz.1
[2025-04-20 09:40:02]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/31/d3/log.44075483._090158.job.log.tgz.1
[2025-04-20 09:40:02]  workdir=None
[2025-04-20 09:40:02] ]
[2025-04-20 09:40:02] 2025-04-20 07:39:38,664 | INFO     | transferring file log.44075483._090158.job.log.tgz.1 from /home/david/boinc/slots/0/PanDA_Pilot-6608357232/log.44075483._090158.job.log.tgz.1 to /home/david/boinc/
[2025-04-20 09:40:02] 2025-04-20 07:39:38,664 | INFO     | executing command: /usr/bin/env mv /home/david/boinc/slots/0/PanDA_Pilot-6608357232/log.44075483._090158.job.log.tgz.1 /home/david/boinc/slots/0/log.44075483._0901
[2025-04-20 09:40:02] 2025-04-20 07:39:38,673 | INFO     | adding to output.list: log.44075483._090158.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/31/d3/log.44075483._090158.job.log.tg
[2025-04-20 09:40:02] 2025-04-20 07:39:38,673 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-20 09:40:02] 2025-04-20 07:39:38,673 | INFO     | summary of transferred files:
[2025-04-20 09:40:02] 2025-04-20 07:39:38,673 | INFO     |  -- lfn=log.44075483._090158.job.log.tgz.1, status_code=0, status=transferred
[2025-04-20 09:40:02] 2025-04-20 07:39:38,674 | INFO     | stage-out finished correctly
[2025-04-20 09:40:02] 2025-04-20 07:39:38,709 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-20 09:40:02] 2025-04-20 07:39:40,587 | INFO     | monitor loop #214: job 0:6608357232 is in state 'finished'
[2025-04-20 09:40:02] 2025-04-20 07:39:40,587 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 09:40:02] 2025-04-20 07:39:40,940 | INFO     | job 6608357232 has state=finished
[2025-04-20 09:40:02] 2025-04-20 07:39:40,940 | INFO     | preparing for final server update for job 6608357232 in state='finished'
[2025-04-20 09:40:02] 2025-04-20 07:39:40,941 | INFO     | this job has now completed (state=finished)
[2025-04-20 09:40:02] 2025-04-20 07:39:40,941 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-20 09:40:02] 2025-04-20 07:39:40,941 | INFO     | log transfer has been attempted: DONE
[2025-04-20 09:40:02] 2025-04-20 07:39:40,941 | INFO     | job 6608357232 has finished - writing final server update
[2025-04-20 09:40:02] 2025-04-20 07:39:40,941 | INFO     | total number of processed events: 400 (read)
[2025-04-20 09:40:02] 2025-04-20 07:39:40,942 | INFO     | executing command: lscpu
[2025-04-20 09:40:02] 2025-04-20 07:39:40,956 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-20 09:40:02] 2025-04-20 07:39:42,477 | INFO     | PID=535379 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-04-20 09:40:02] 2025-04-20 07:39:42,765 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-20 09:40:02] 2025-04-20 07:39:42,765 | INFO     | using path: /home/david/boinc/slots/0/PanDA_Pilot-6608357232/memory_monitor_summary.json (trf name=prmon)
[2025-04-20 09:40:02] 2025-04-20 07:39:42,766 | INFO     | extracted standard info from prmon json
[2025-04-20 09:40:02] 2025-04-20 07:39:42,766 | INFO     | extracted standard memory fields from prmon json
[2025-04-20 09:40:02] 2025-04-20 07:39:42,766 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-20 09:40:02] 2025-04-20 07:39:42,766 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-20 09:40:02] 2025-04-20 07:39:42,766 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-20 09:40:02] 2025-04-20 07:39:42,767 | INFO     | fitting pss+swap vs Time
[2025-04-20 09:40:02] 2025-04-20 07:39:42,767 | INFO     | sum of square deviations: 18381740.0
[2025-04-20 09:40:02] 2025-04-20 07:39:42,767 | INFO     | sum of deviations: 9032386693.0
[2025-04-20 09:40:02] 2025-04-20 07:39:42,767 | INFO     | mean x: 1745133493.0
[2025-04-20 09:40:02] 2025-04-20 07:39:42,767 | INFO     | mean y: 2628016.564102564
[2025-04-20 09:40:02] 2025-04-20 07:39:42,767 | INFO     | -- intersect: -857517962508.6968
[2025-04-20 09:40:02] 2025-04-20 07:39:42,767 | INFO     | intersect: -857517962508.6968
[2025-04-20 09:40:02] 2025-04-20 07:39:42,767 | INFO     | chi2: 0.9743494509852064
[2025-04-20 09:40:02] 2025-04-20 07:39:42,767 | INFO     | -- intersect: -857517962508.6968
[2025-04-20 09:40:02] 2025-04-20 07:39:42,767 | INFO     | current memory leak: 491.38 B/s (using 39 data points, chi2=0.97)
[2025-04-20 09:40:02] 2025-04-20 07:39:42,768 | INFO     | ..............................
[2025-04-20 09:40:02] 2025-04-20 07:39:42,768 | INFO     | . Timing measurements:
[2025-04-20 09:40:02] 2025-04-20 07:39:42,768 | INFO     | . get job = 0 s
[2025-04-20 09:40:02] 2025-04-20 07:39:42,768 | INFO     | . initial setup = 1 s
[2025-04-20 09:40:02] 2025-04-20 07:39:42,768 | INFO     | . payload setup = 2 s
[2025-04-20 09:40:02] 2025-04-20 07:39:42,768 | INFO     | . stage-in = 0 s
[2025-04-20 09:40:02] 2025-04-20 07:39:42,768 | INFO     | . payload execution = 2748 s
[2025-04-20 09:40:02] 2025-04-20 07:39:42,768 | INFO     | . stage-out = 0 s
[2025-04-20 09:40:02] 2025-04-20 07:39:42,768 | INFO     | . log creation = 0 s
[2025-04-20 09:40:02] 2025-04-20 07:39:42,768 | INFO     | ..............................
[2025-04-20 09:40:02] 2025-04-20 07:39:42,807 | INFO     | 
[2025-04-20 09:40:02] 2025-04-20 07:39:42,807 | INFO     | job summary report
[2025-04-20 09:40:02] 2025-04-20 07:39:42,807 | INFO     | --------------------------------------------------
[2025-04-20 09:40:02] 2025-04-20 07:39:42,807 | INFO     | PanDA job id: 6608357232
[2025-04-20 09:40:02] 2025-04-20 07:39:42,807 | INFO     | task id: 44075483
[2025-04-20 09:40:02] 2025-04-20 07:39:42,807 | INFO     | errors: (none)
[2025-04-20 09:40:02] 2025-04-20 07:39:42,807 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-20 09:40:02] 2025-04-20 07:39:42,807 | INFO     | pilot state: finished 
[2025-04-20 09:40:02] 2025-04-20 07:39:42,807 | INFO     | transexitcode: 0
[2025-04-20 09:40:02] 2025-04-20 07:39:42,807 | INFO     | exeerrorcode: 0
[2025-04-20 09:40:02] 2025-04-20 07:39:42,808 | INFO     | exeerrordiag: 
[2025-04-20 09:40:02] 2025-04-20 07:39:42,808 | INFO     | exitcode: 0
[2025-04-20 09:40:02] 2025-04-20 07:39:42,808 | INFO     | exitmsg: OK
[2025-04-20 09:40:02] 2025-04-20 07:39:42,808 | INFO     | cpuconsumptiontime: 23738 s
[2025-04-20 09:40:02] 2025-04-20 07:39:42,808 | INFO     | nevents: 400
[2025-04-20 09:40:02] 2025-04-20 07:39:42,808 | INFO     | neventsw: 0
[2025-04-20 09:40:02] 2025-04-20 07:39:42,808 | INFO     | pid: 541939
[2025-04-20 09:40:02] 2025-04-20 07:39:42,808 | INFO     | pgrp: 541939
[2025-04-20 09:40:02] 2025-04-20 07:39:42,808 | INFO     | corecount: 12
[2025-04-20 09:40:02] 2025-04-20 07:39:42,808 | INFO     | event service: False
[2025-04-20 09:40:02] 2025-04-20 07:39:42,808 | INFO     | sizes: {0: 2426770, 2: 2426976, 10: 2427004, 2754: 2452303, 2755: 2461306, 2759: 2461420}
[2025-04-20 09:40:02] 2025-04-20 07:39:42,808 | INFO     | --------------------------------------------------
[2025-04-20 09:40:02] 2025-04-20 07:39:42,808 | INFO     | 
[2025-04-20 09:40:02] 2025-04-20 07:39:42,808 | INFO     | executing command: ls -lF /home/david/boinc/slots/0
[2025-04-20 09:40:02] 2025-04-20 07:39:42,818 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-20 09:40:02] 2025-04-20 07:39:42,818 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-20 09:40:02] 2025-04-20 07:39:42,818 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-20 09:40:02] 2025-04-20 07:39:42,818 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-20 09:40:02] 2025-04-20 07:39:42,818 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-20 09:40:02] 2025-04-20 07:39:42,818 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-20 09:40:02] 2025-04-20 07:39:42,818 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-20 09:40:02] 2025-04-20 07:39:42,818 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-20 09:40:02] 2025-04-20 07:39:42,818 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-20 09:40:02] 2025-04-20 07:39:42,818 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-20 09:40:02] 2025-04-20 07:39:42,818 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-20 09:40:02] 2025-04-20 07:39:42,818 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-20 09:40:02] 2025-04-20 07:39:42,818 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-20 09:40:02] 2025-04-20 07:39:42,818 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-20 09:40:02] 2025-04-20 07:39:42,818 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-20 09:40:02] 2025-04-20 07:39:42,818 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-20 09:40:02] 2025-04-20 07:39:42,818 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-20 09:40:02] 2025-04-20 07:39:42,818 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-20 09:40:02] 2025-04-20 07:39:42,818 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-20 09:40:02] 2025-04-20 07:39:42,819 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-20 09:40:02] 2025-04-20 07:39:42,819 | INFO     | job 6608357232 has completed (purged errors)
[2025-04-20 09:40:02] 2025-04-20 07:39:42,819 | INFO     | overall cleanup function is called
[2025-04-20 09:40:02] 2025-04-20 07:39:43,826 | INFO     | --- collectZombieJob: --- 10, [541939]
[2025-04-20 09:40:02] 2025-04-20 07:39:43,826 | INFO     | zombie collector waiting for pid 541939
[2025-04-20 09:40:02] 2025-04-20 07:39:43,826 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-20 09:40:02] 2025-04-20 07:39:43,826 | INFO     | collected zombie processes
[2025-04-20 09:40:02] 2025-04-20 07:39:43,826 | INFO     | will attempt to kill all subprocesses of pid=541939
[2025-04-20 09:40:02] 2025-04-20 07:39:43,900 | INFO     | process IDs to be killed: [541939] (in reverse order)
[2025-04-20 09:40:02] 2025-04-20 07:39:43,926 | WARNING  | found no corresponding commands to process id(s)
[2025-04-20 09:40:02] 2025-04-20 07:39:43,926 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-20 09:40:02] 2025-04-20 07:39:43,927 | INFO     | did not find any defunct processes belonging to 541939
[2025-04-20 09:40:02] 2025-04-20 07:39:43,929 | INFO     | did not find any defunct processes belonging to 541939
[2025-04-20 09:40:02] 2025-04-20 07:39:43,929 | INFO     | ready for new job
[2025-04-20 09:40:02] 2025-04-20 07:39:43,929 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-20 09:40:02] 2025-04-20 07:39:43,930 | INFO     | **************************************
[2025-04-20 09:40:02] 2025-04-20 07:39:43,930 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-20 09:40:02] 2025-04-20 07:39:43,930 | INFO     | **************************************
[2025-04-20 09:40:02] 2025-04-20 07:39:43,930 | INFO     | 
[2025-04-20 09:40:02] 2025-04-20 07:39:43,931 | INFO     | architecture information:
[2025-04-20 09:40:02] 2025-04-20 07:39:43,931 | INFO     | executing command: cat /etc/os-release
[2025-04-20 09:40:02] 2025-04-20 07:39:43,938 | INFO     | cat /etc/os-release:
[2025-04-20 09:40:02] NAME="CentOS Linux"
[2025-04-20 09:40:02] VERSION="7 (Core)"
[2025-04-20 09:40:02] ID="centos"
[2025-04-20 09:40:02] ID_LIKE="rhel fedora"
[2025-04-20 09:40:02] VERSION_ID="7"
[2025-04-20 09:40:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-20 09:40:02] ANSI_COLOR="0;31"
[2025-04-20 09:40:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-20 09:40:02] HOME_URL="https://www.centos.org/"
[2025-04-20 09:40:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-20 09:40:02] 
[2025-04-20 09:40:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-20 09:40:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-20 09:40:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-20 09:40:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-20 09:40:02] 
[2025-04-20 09:40:02] 2025-04-20 07:39:43,938 | INFO     | **************************************
[2025-04-20 09:40:02] 2025-04-20 07:39:44,441 | INFO     | executing command: df -mP /home/david/boinc/slots/0
[2025-04-20 09:40:02] 2025-04-20 07:39:44,448 | INFO     | sufficient remaining disk space (238253244416 B)
[2025-04-20 09:40:02] 2025-04-20 07:39:44,448 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-20 09:40:02] 2025-04-20 07:39:44,448 | INFO     | current server update state: UPDATING_FINAL
[2025-04-20 09:40:02] 2025-04-20 07:39:44,449 | INFO     | update_server=False
[2025-04-20 09:40:02] 2025-04-20 07:39:44,449 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-20 09:40:02] 2025-04-20 07:39:44,449 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-20 09:40:02] 2025-04-20 07:39:44,449 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-20 09:40:02] 2025-04-20 07:39:44,449 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-20 09:40:02] 2025-04-20 07:39:44,449 | INFO     | aborting loop
[2025-04-20 09:40:02] 2025-04-20 07:39:44,482 | INFO     | found 0 job(s) in 20 queues
[2025-04-20 09:40:02] 2025-04-20 07:39:44,482 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-20 09:40:02] 2025-04-20 07:39:44,482 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-20 09:40:02] 2025-04-20 07:39:44,749 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-20 09:40:02] 2025-04-20 07:39:45,161 | INFO     | all payload control threads have been joined
[2025-04-20 09:40:02] 2025-04-20 07:39:45,450 | INFO     | [job] retrieve thread has finished
[2025-04-20 09:40:02] 2025-04-20 07:39:45,454 | INFO     | [job] job monitor thread has finished
[2025-04-20 09:40:02] 2025-04-20 07:39:45,454 | INFO     | [job] queue monitor thread has finished
[2025-04-20 09:40:02] 2025-04-20 07:39:45,463 | INFO     | all data control threads have been joined
[2025-04-20 09:40:02] 2025-04-20 07:39:45,466 | INFO     | all job control threads have been joined
[2025-04-20 09:40:02] 2025-04-20 07:39:45,759 | INFO     | [payload] validate_post thread has finished
[2025-04-20 09:40:02] 2025-04-20 07:39:45,881 | INFO     | [job] validate thread has finished
[2025-04-20 09:40:02] 2025-04-20 07:39:45,981 | INFO     | [job] create_data_payload thread has finished
[2025-04-20 09:40:02] 2025-04-20 07:39:46,011 | INFO     | [payload] validate_pre thread has finished
[2025-04-20 09:40:02] 2025-04-20 07:39:46,166 | INFO     | [payload] control thread has finished
[2025-04-20 09:40:02] 2025-04-20 07:39:46,453 | INFO     | [data] copytool_out thread has finished
[2025-04-20 09:40:02] 2025-04-20 07:39:46,468 | INFO     | [data] control thread has finished
[2025-04-20 09:40:02] 2025-04-20 07:39:46,471 | INFO     | [job] control thread has finished
[2025-04-20 09:40:02] 2025-04-20 07:39:46,521 | INFO     | [data] copytool_in thread has finished
[2025-04-20 09:40:02] 2025-04-20 07:39:46,522 | INFO     | [payload] failed_post thread has finished
[2025-04-20 09:40:02] 2025-04-20 07:39:46,824 | INFO     | [payload] execute_payloads thread has finished
[2025-04-20 09:40:02] 2025-04-20 07:39:48,754 | INFO     | [data] queue_monitor thread has finished
[2025-04-20 09:40:02] 2025-04-20 07:39:54,999 | INFO     | job.realtimelogging is not enabled
[2025-04-20 09:40:02] 2025-04-20 07:39:56,004 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-20 09:40:02] 2025-04-20 07:39:57,708 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140388740003648)>', '<ExcThread(monitor, started 140387968603904)>']
[2025-04-20 09:40:02] 2025-04-20 07:39:58,550 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-20 09:40:02] 2025-04-20 07:39:58,550 | INFO     | [monitor] control thread has ended
[2025-04-20 09:40:02] 2025-04-20 07:40:02,718 | INFO     | all workflow threads have been joined
[2025-04-20 09:40:02] 2025-04-20 07:40:02,718 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-20 09:40:02] 2025-04-20 07:40:02,718 | INFO     | traces error code: 0
[2025-04-20 09:40:02] 2025-04-20 07:40:02,718 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-20 09:40:02] 2025-04-20 07:40:02,764 [wrapper] ==== pilot stdout END ====
[2025-04-20 09:40:02] 2025-04-20 07:40:02,765 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-20 09:40:02] 2025-04-20 07:40:02,767 [wrapper] pilotpid: 535379
[2025-04-20 09:40:02] 2025-04-20 07:40:02,768 [wrapper] Pilot exit status: 0
[2025-04-20 09:40:02] 2025-04-20 07:40:02,773 [wrapper] pandaids: 6608357232
[2025-04-20 09:40:02] 2025-04-20 07:40:02,790 [wrapper] cleanup supervisor_pilot  554448 535380
[2025-04-20 09:40:02] 2025-04-20 07:40:02,792 [wrapper] Test setup, not cleaning
[2025-04-20 09:40:02] 2025-04-20 07:40:02,793 [wrapper] apfmon messages muted
[2025-04-20 09:40:02] 2025-04-20 07:40:02,795 [wrapper] ==== wrapper stdout END ====
[2025-04-20 09:40:02] 2025-04-20 07:40:02,796 [wrapper] ==== wrapper stderr END ====
[2025-04-20 09:40:02]  *** Error codes and diagnostics ***
[2025-04-20 09:40:02]     "exeErrorCode": 0,
[2025-04-20 09:40:02]     "exeErrorDiag": "",
[2025-04-20 09:40:02]     "pilotErrorCode": 0,
[2025-04-20 09:40:02]     "pilotErrorDiag": "",
[2025-04-20 09:40:02]  *** Listing of results directory ***
[2025-04-20 09:40:02] total 413228
[2025-04-20 09:40:02] -rw-r--r-- 1 david david    495897 Apr 20 02:31 pilot3.tar.gz
[2025-04-20 09:40:02] -rw-r--r-- 1 david david      5111 Apr 20 02:32 queuedata.json
[2025-04-20 09:40:02] -rwx------ 1 david david     37140 Apr 20 02:33 runpilot2-wrapper.sh
[2025-04-20 09:40:02] -rw-r--r-- 1 david david       100 Apr 20 08:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-20 09:40:02] -rwxr-xr-x 1 david david      7986 Apr 20 08:53 run_atlas
[2025-04-20 09:40:02] -rw-r--r-- 1 david david       105 Apr 20 08:53 job.xml
[2025-04-20 09:40:02] -rw-r--r-- 2 david david 224077718 Apr 20 08:53 EVNT.44075481._003514.pool.root.1
[2025-04-20 09:40:02] -rw-r--r-- 2 david david     17569 Apr 20 08:53 start_atlas.sh
[2025-04-20 09:40:02] drwxrwx--x 1 david david        76 Apr 20 08:53 shared
[2025-04-20 09:40:02] -rw-r--r-- 2 david david    508892 Apr 20 08:53 input.tar.gz
[2025-04-20 09:40:02] -rw-r--r-- 1 david david      7526 Apr 20 08:53 init_data.xml
[2025-04-20 09:40:02] -rw-r--r-- 1 david david         0 Apr 20 08:53 boinc_setup_complete
[2025-04-20 09:40:02] -rw-r--r-- 1 david david         0 Apr 20 08:53 boinc_lockfile
[2025-04-20 09:40:02] -rw-r--r-- 1 david david      2575 Apr 20 08:53 pandaJob.out
[2025-04-20 09:40:02] -rw------- 1 david david       424 Apr 20 08:53 setup.sh.local
[2025-04-20 09:40:02] -rw------- 1 david david    991284 Apr 20 08:53 agis_schedconf.cvmfs.json
[2025-04-20 09:40:02] -rw------- 1 david david   1618536 Apr 20 08:53 agis_ddmendpoints.agis.ALL.json
[2025-04-20 09:40:02] drwx------ 1 david david       368 Apr 20 08:53 pilot3
[2025-04-20 09:40:02] -rw------- 1 david david        95 Apr 20 09:38 pilot_heartbeat.json
[2025-04-20 09:40:02] -rw------- 1 david david 193965249 Apr 20 09:39 HITS.44075483._090158.pool.root.1
[2025-04-20 09:40:02] -rw-r--r-- 1 david david       529 Apr 20 09:39 boinc_task_state.xml
[2025-04-20 09:40:02] -rw------- 1 david david      1014 Apr 20 09:39 memory_monitor_summary.json
[2025-04-20 09:40:02] -rw------- 1 david david    328976 Apr 20 09:39 log.44075483._090158.job.log.tgz.1
[2025-04-20 09:40:02] -rw------- 1 david david      7651 Apr 20 09:39 heartbeat.json
[2025-04-20 09:40:02] -rw-r--r-- 1 david david      8192 Apr 20 09:40 boinc_mmap_file
[2025-04-20 09:40:02] -rw-r--r-- 1 david david        27 Apr 20 09:40 wrapper_checkpoint.txt
[2025-04-20 09:40:02] -rw------- 1 david david      4429 Apr 20 09:40 pilotlog.txt
[2025-04-20 09:40:02] -rw------- 1 david david    295674 Apr 20 09:40 log.44075483._090158.job.log.1
[2025-04-20 09:40:02] -rw------- 1 david david       357 Apr 20 09:40 output.list
[2025-04-20 09:40:02] -rw-r--r-- 1 david david       620 Apr 20 09:40 runtime_log
[2025-04-20 09:40:02] -rw------- 1 david david    645120 Apr 20 09:40 result.tar.gz
[2025-04-20 09:40:02] -rw-r--r-- 1 david david     11014 Apr 20 09:40 runtime_log.err
[2025-04-20 09:40:02] -rw------- 1 david david       637 Apr 20 09:40 9B5KDmLoXQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmZEjLDmObfYqn.diag
[2025-04-20 09:40:02] -rw-r--r-- 1 david david     21123 Apr 20 09:40 stderr.txt
[2025-04-20 09:40:02] HITS file was successfully produced:
[2025-04-20 09:40:02] -rw------- 1 david david 193965249 Apr 20 09:39 shared/HITS.pool.root.1
[2025-04-20 09:40:02]  *** Contents of shared directory: ***
[2025-04-20 09:40:02] total 409400
[2025-04-20 09:40:02] -rw-r--r-- 2 david david 224077718 Apr 20 08:53 ATLAS.root_0
[2025-04-20 09:40:02] -rw-r--r-- 2 david david     17569 Apr 20 08:53 start_atlas.sh
[2025-04-20 09:40:02] -rw-r--r-- 2 david david    508892 Apr 20 08:53 input.tar.gz
[2025-04-20 09:40:02] -rw------- 1 david david 193965249 Apr 20 09:39 HITS.pool.root.1
[2025-04-20 09:40:02] -rw------- 1 david david    645120 Apr 20 09:40 result.tar.gz
09:40:04 (531659): run_atlas exited; CPU time 23760.434901
09:40:04 (531659): called boinc_finish(0)

</stderr_txt>
]]>

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