Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-20 03:54:41 (12648): Detected: vboxwrapper 26206
2025-04-20 03:54:42 (12648): Detected: BOINC client v8.0.2
2025-04-20 03:54:45 (12648): Detected: VirtualBox VboxManage Interface (Version: 6.1.12)
2025-04-20 03:54:45 (12648): Successfully copied 'init_data.xml' to the shared directory.
2025-04-20 03:54:46 (12648): Create VM. (boinc_36dea7b066c7a25f, slot#4)
2025-04-20 03:54:47 (12648): Setting Memory Size for VM. (4400MB)
2025-04-20 03:54:48 (12648): Setting CPU Count for VM. (4)
2025-04-20 03:54:48 (12648): Setting Chipset Options for VM.
2025-04-20 03:54:48 (12648): Setting Graphics Controller Options for VM.
2025-04-20 03:54:49 (12648): Setting Boot Options for VM.
2025-04-20 03:54:49 (12648): Setting Network Configuration for NAT.
2025-04-20 03:54:50 (12648): Enabling VM Network Access.
2025-04-20 03:54:50 (12648): Disabling USB Support for VM.
2025-04-20 03:54:51 (12648): Disabling COM Port Support for VM.
2025-04-20 03:54:51 (12648): Disabling LPT Port Support for VM.
2025-04-20 03:54:51 (12648): Disabling Audio Support for VM.
2025-04-20 03:54:51 (12648): Disabling Clipboard Support for VM.
2025-04-20 03:54:52 (12648): Disabling Drag and Drop Support for VM.
2025-04-20 03:54:52 (12648): Adding storage controller(s) to VM.
2025-04-20 03:54:52 (12648): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-20 03:54:54 (12648): Adding VirtualBox Guest Additions to VM.
2025-04-20 03:54:55 (12648): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-20 03:54:55 (12648): forwarding host port 60022 to guest port 80
2025-04-20 03:54:55 (12648): Enabling remote desktop for VM.
2025-04-20 03:54:56 (12648): Required extension pack not installed, remote desktop not enabled.
2025-04-20 03:54:56 (12648): Enabling shared directory for VM.
2025-04-20 03:54:57 (12648): Starting VM using VBoxManage interface. (boinc_36dea7b066c7a25f, slot#4)
2025-04-20 03:55:07 (12648): Successfully started VM. (PID = '12840')
2025-04-20 03:55:07 (12648): Reporting VM Process ID to BOINC.
2025-04-20 03:55:07 (12648): Guest Log: BIOS: VirtualBox 6.1.12
2025-04-20 03:55:07 (12648): Guest Log: CPUID EDX: 0x178bfbff
2025-04-20 03:55:07 (12648): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-20 03:55:07 (12648): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-20 03:55:07 (12648): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-20 03:55:07 (12648): Detected: Web Application Enabled (http://localhost:60022)
2025-04-20 03:55:07 (12648): Preference change detected
2025-04-20 03:55:07 (12648): Setting CPU throttle for VM. (100%)
2025-04-20 03:55:08 (12648): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-20 03:55:09 (12648): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-20 03:55:09 (12648): Guest Log: BIOS: Booting from Hard Disk...
2025-04-20 03:55:13 (12648): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-20 03:55:13 (12648): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-20 03:55:13 (12648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-20 03:55:13 (12648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-20 03:55:13 (12648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-20 03:55:13 (12648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-20 03:55:13 (12648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-20 03:55:13 (12648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-20 03:55:13 (12648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-20 03:55:13 (12648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-20 03:55:13 (12648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-20 03:55:13 (12648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-20 03:55:13 (12648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-20 03:55:13 (12648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-20 03:55:13 (12648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-20 03:55:13 (12648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-20 03:55:13 (12648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-20 03:55:13 (12648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-20 03:55:13 (12648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-20 03:55:13 (12648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-20 03:55:13 (12648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-20 03:55:14 (12648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-20 03:55:14 (12648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-20 03:55:14 (12648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-20 03:55:14 (12648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-20 03:55:14 (12648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-20 03:55:14 (12648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-20 03:55:14 (12648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-20 03:55:14 (12648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-20 03:55:14 (12648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-20 03:55:14 (12648): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-20 03:55:14 (12648): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-20 03:55:37 (12648): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-20 03:55:37 (12648): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-20 03:56:18 (12648): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-20 03:56:18 (12648): Guest Log: 00:00:00.001353 main     Log opened 2025-04-20T03:56:16.334718000Z
2025-04-20 03:56:18 (12648): Guest Log: 00:00:00.002352 main     OS Product: Linux
2025-04-20 03:56:18 (12648): Guest Log: 00:00:00.003022 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-20 03:56:18 (12648): Guest Log: 00:00:00.003768 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-20 03:56:18 (12648): Guest Log: 00:00:00.004510 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-20 03:56:18 (12648): Guest Log: 00:00:00.004528 main     Process ID: 1312
2025-04-20 03:56:18 (12648): Guest Log: 00:00:00.004531 main     Package type: LINUX_64BITS_GENERIC
2025-04-20 03:56:18 (12648): Guest Log: 00:00:00.015015 main     5.2.32 r132073 started. Verbose level = 0
2025-04-20 03:56:19 (12648): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-20 03:56:19 (12648): Guest Log: [INFO] Mounting shared directory
2025-04-20 03:56:20 (12648): Guest Log: [INFO] Checking for init_data.xml
2025-04-20 03:56:27 (12648): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-20 03:56:27 (12648): Guest Log: [INFO] Detected branch: prod
2025-04-20 03:56:27 (12648): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-20 03:56:27 (12648): Guest Log: Copying input files
2025-04-20 03:56:28 (12648): Guest Log: 00:00:10.020428 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 504 147 000ns (GuestNow=1 745 135 787 854 588 000 ns GuestLast=1 745 121 376 350 441 000 ns fSetTimeLastLoop=true )
2025-04-20 03:56:35 (12648): Guest Log: Copied input files into RunAtlas.
2025-04-20 03:56:36 (12648): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-20 03:56:36 (12648): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-20 03:56:36 (12648): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-20 03:56:36 (12648): Guest Log: Further information can be found at the LHC@home message board.
2025-04-20 03:56:51 (12648): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-20 03:56:52 (12648): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-20 03:56:52 (12648): Guest Log: 2.6.3.0 1594 0 32212 145066 3 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-20 03:56:58 (12648): Guest Log: copied the webapp to /var/www
2025-04-20 03:56:59 (12648): Guest Log: ATHENA_PROC_NUMBER=4
2025-04-20 03:56:59 (12648): Guest Log: ATHENA_CORE_NUMBER=4
2025-04-20 03:56:59 (12648): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-20 03:56:59 (12648): Guest Log:  *** Starting ATLAS job. (PandaID=6608146074 taskID=44075483) ***
2025-04-20 05:39:09 (12648): Status Report: Elapsed Time: '6000.517384'
2025-04-20 05:39:09 (12648): Status Report: CPU Time: '18158.656250'
2025-04-20 07:24:45 (12648): Status Report: Elapsed Time: '12001.487074'
2025-04-20 07:24:45 (12648): Status Report: CPU Time: '43197.718750'
2025-04-20 08:48:46 (12648): Guest Log:  *** Job finished ***
2025-04-20 08:48:46 (12648): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-20 08:48:46 (12648): Guest Log: 2025-04-20 12:48:33,330 | INFO     | [job] control thread has finished
2025-04-20 08:48:46 (12648): Guest Log: 2025-04-20 12:48:33,382 | INFO     | [job] queue monitor thread has finished
2025-04-20 08:48:46 (12648): Guest Log: 2025-04-20 12:48:36,007 | INFO     | [data] queue_monitor thread has finished
2025-04-20 08:48:46 (12648): Guest Log: 2025-04-20 12:48:38,081 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140515552499520)>', '<ExcThread(monitor, started 140514670139136)>']
2025-04-20 08:48:46 (12648): Guest Log: 2025-04-20 12:48:38,557 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-20 08:48:46 (12648): Guest Log: 2025-04-20 12:48:38,557 | INFO     | [monitor] control thread has ended
2025-04-20 08:48:46 (12648): Guest Log: 2025-04-20 12:48:43,095 | INFO     | all workflow threads have been joined
2025-04-20 08:48:46 (12648): Guest Log: 2025-04-20 12:48:43,099 | INFO     | end of generic workflow (traces error code: 0)
2025-04-20 08:48:46 (12648): Guest Log: 2025-04-20 12:48:43,099 | INFO     | traces error code: 0
2025-04-20 08:48:46 (12648): Guest Log: 2025-04-20 12:48:43,102 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-20 08:48:46 (12648): Guest Log: 2025-04-20 12:48:43,704 [wrapper] ==== pilot stdout END ====
2025-04-20 08:48:46 (12648): Guest Log: 2025-04-20 12:48:43,726 [wrapper] ==== wrapper stdout RESUME ====
2025-04-20 08:48:46 (12648): Guest Log: 2025-04-20 12:48:43,756 [wrapper] pilotpid: 5936
2025-04-20 08:48:46 (12648): Guest Log: 2025-04-20 12:48:43,780 [wrapper] Pilot exit status: 0
2025-04-20 08:48:46 (12648): Guest Log: 2025-04-20 12:48:44,007 [wrapper] pandaids: 6608146074
2025-04-20 08:48:46 (12648): Guest Log: 2025-04-20 12:48:44,152 [wrapper] cleanup supervisor_pilot 19891 5937
2025-04-20 08:48:46 (12648): Guest Log: 2025-04-20 12:48:44,161 [wrapper] Test setup, not cleaning
2025-04-20 08:48:46 (12648): Guest Log: 2025-04-20 12:48:44,169 [wrapper] apfmon messages muted
2025-04-20 08:48:46 (12648): Guest Log: 2025-04-20 12:48:44,275 [wrapper] ==== wrapper stdout END ====
2025-04-20 08:48:46 (12648): Guest Log: 2025-04-20 12:48:44,317 [wrapper] ==== wrapper stderr END ====
2025-04-20 08:48:46 (12648): Guest Log:  *** Error codes and diagnostics ***
2025-04-20 08:48:46 (12648): Guest Log:     "exeErrorCode": 0,
2025-04-20 08:48:46 (12648): Guest Log:     "exeErrorDiag": "",
2025-04-20 08:48:46 (12648): Guest Log:     "pilotErrorCode": 0,
2025-04-20 08:48:46 (12648): Guest Log:     "pilotErrorDiag": "",
2025-04-20 08:48:46 (12648): Guest Log:  *** Listing of results directory ***
2025-04-20 08:48:46 (12648): Guest Log: total 201860
2025-04-20 08:48:46 (12648): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 19 21:05 pilot3.tar.gz
2025-04-20 08:48:46 (12648): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 19 21:10 queuedata.json
2025-04-20 08:48:46 (12648): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 19 21:11 runpilot2-wrapper.sh
2025-04-20 08:48:46 (12648): Guest Log: -rwxr-xr-x. 1 atlas atlas      8405 Apr 20 07:56 init_data.xml
2025-04-20 08:48:46 (12648): Guest Log: -rwxr-xr-x. 1 atlas atlas    508896 Apr 20 07:56 input.tar.gz
2025-04-20 08:48:46 (12648): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr 20 07:56 start_atlas.sh
2025-04-20 08:48:46 (12648): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 20 07:56 EVNT.44075481._003444.pool.root.1 -> /data/./ATLAS.root_0
2025-04-20 08:48:46 (12648): Guest Log: -rw-r--r--. 1 atlas atlas      2578 Apr 20 07:56 pandaJob.out
2025-04-20 08:48:46 (12648): Guest Log: -rw-------. 1 atlas atlas       424 Apr 20 07:57 setup.sh.local
2025-04-20 08:48:46 (12648): Guest Log: -rw-------. 1 atlas atlas    991292 Apr 20 07:58 agis_schedconf.cvmfs.json
2025-04-20 08:48:46 (12648): Guest Log: drwx------. 4 atlas atlas      4096 Apr 20 07:59 pilot3
2025-04-20 08:48:46 (12648): Guest Log: -rw-------. 1 atlas atlas 199296868 Apr 20 12:46 HITS.44075483._088321.pool.root.1
2025-04-20 08:48:46 (12648): Guest Log: -rw-------. 1 atlas atlas      1029 Apr 20 12:47 memory_monitor_summary.json
2025-04-20 08:48:46 (12648): Guest Log: -rw-------. 1 atlas atlas   1618536 Apr 20 12:47 agis_ddmendpoints.agis.ALL.json
2025-04-20 08:48:46 (12648): Guest Log: -rw-------. 1 atlas atlas    354015 Apr 20 12:47 log.44075483._088321.job.log.tgz.1
2025-04-20 08:48:46 (12648): Guest Log: -rw-------. 1 atlas atlas        95 Apr 20 12:48 pilot_heartbeat.json
2025-04-20 08:48:46 (12648): Guest Log: -rw-------. 1 atlas atlas      7742 Apr 20 12:48 heartbeat.json
2025-04-20 08:48:46 (12648): Guest Log: -rw-------. 1 atlas atlas      4599 Apr 20 12:48 pilotlog.txt
2025-04-20 08:48:46 (12648): Guest Log: -rw-------. 1 atlas atlas   1450244 Apr 20 12:48 log.44075483._088321.job.log.1
2025-04-20 08:48:46 (12648): Guest Log: -rw-------. 1 atlas atlas       357 Apr 20 12:48 output.list
2025-04-20 08:48:46 (12648): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 20 12:48 runtime_log
2025-04-20 08:48:46 (12648): Guest Log: -rw-------. 1 atlas atlas   1822720 Apr 20 12:48 result.tar.gz
2025-04-20 08:48:46 (12648): Guest Log: -rw-r--r--. 1 atlas atlas     10966 Apr 20 12:48 runtime_log.err
2025-04-20 08:48:46 (12648): Guest Log: -rw-------. 1 atlas atlas       667 Apr 20 12:48 feKKDmmeUQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm9uiLDmmtSRCn.diag
2025-04-20 08:48:46 (12648): Guest Log: Looking for outputfile HITS.44075483._088321.pool.root.1
2025-04-20 08:48:46 (12648): Guest Log: HITS file was successfully produced
2025-04-20 08:48:46 (12648): Guest Log: -rw-------. 1 atlas atlas 199296868 Apr 20 12:46 /home/atlas/RunAtlas/HITS.44075483._088321.pool.root.1
2025-04-20 08:48:52 (12648): Guest Log: Successfully finished the ATLAS job!
2025-04-20 08:48:52 (12648): Guest Log: Copying the results back to the shared directory!
2025-04-20 08:48:53 (12648): Guest Log:  *** Contents of shared directory: ***
2025-04-20 08:48:53 (12648): Guest Log: total 418052
2025-04-20 08:48:53 (12648): Guest Log: -rwxrwxrwx. 1 root root 226416616 Apr 20 07:54 ATLAS.root_0
2025-04-20 08:48:53 (12648): Guest Log: -rwxrwxrwx. 1 root root 199296868 Apr 20 12:48 HITS.pool.root.1
2025-04-20 08:48:53 (12648): Guest Log: -rwxrwxrwx. 1 root root      8405 Apr 20 07:54 init_data.xml
2025-04-20 08:48:53 (12648): Guest Log: -rwxrwxrwx. 1 root root    508896 Apr 20 04:00 input.tar.gz
2025-04-20 08:48:53 (12648): Guest Log: -rwxrwxrwx. 1 root root   1822720 Apr 20 12:48 result.tar.gz
2025-04-20 08:48:53 (12648): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 20 04:00 start_atlas.sh
2025-04-20 08:48:53 (12648): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-20 08:48:53 (12648): VM Completion File Detected.
2025-04-20 08:48:53 (12648): Powering off VM.
2025-04-20 08:48:57 (12648): Successfully stopped VM.
2025-04-20 08:48:57 (12648): Deregistering VM. (boinc_36dea7b066c7a25f, slot#4)
2025-04-20 08:48:58 (12648): Removing network bandwidth throttle group from VM.
2025-04-20 08:48:58 (12648): Removing VM from VirtualBox.
08:49:04 (12648): called boinc_finish(0)

</stderr_txt>
]]>

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