Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:25:28 (3276330): wrapper (7.7.26015): starting
22:25:28 (3276330): wrapper: running run_atlas (--nthreads 9)
[2025-04-19 22:25:28] Arguments: --nthreads 9
[2025-04-19 22:25:28] Threads: 9
[2025-04-19 22:25:28] Checking for CVMFS
[2025-04-19 22:25:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 22:25:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 22:25:28] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 22:25:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 22:25:28] 2.12.6.0 1342635 216157 276736 145059 2 280 19431027 32935936 14785 130560 0 68287858 99.398 111655415 28092 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-19 22:25:28] CVMFS is ok
[2025-04-19 22:25:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 22:25:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 22:25:28] Further information can be found at the LHC@home message board.
[2025-04-19 22:25:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 22:25:28] Checking for apptainer binary...
[2025-04-19 22:25:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 22:25:28] Running /usr/bin/apptainer --version
[2025-04-19 22:25:28] apptainer version 1.4.0-1.el9
[2025-04-19 22:25:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 22:25:28] c6-1-24-3.aglt2.org
[2025-04-19 22:25:28] apptainer works
[2025-04-19 22:25:29] Set ATHENA_PROC_NUMBER=9
[2025-04-19 22:25:29] Set ATHENA_CORE_NUMBER=9
[2025-04-19 22:25:29] Starting ATLAS job with PandaID=6608072208
[2025-04-19 22:25:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-20 00:43:49]  *** The last 200 lines of the pilot log: ***
[2025-04-20 00:43:49] 2025-04-20 04:43:32,049 | INFO     | intersect: -153494190721.5533
[2025-04-20 00:43:49] 2025-04-20 04:43:32,049 | INFO     | chi2: 4.705007842068885
[2025-04-20 00:43:49] 2025-04-20 04:43:32,049 | INFO     | current chi2=4.705007842068885 (change=0.5006078741719688 %)
[2025-04-20 00:43:49] 2025-04-20 04:43:32,049 | INFO     | right removable region: 129
[2025-04-20 00:43:49] 2025-04-20 04:43:32,049 | INFO     | sum of square deviations: 681180210.9923093
[2025-04-20 00:43:49] 2025-04-20 04:43:32,050 | INFO     | sum of deviations: 31030511419.34617
[2025-04-20 00:43:49] 2025-04-20 04:43:32,050 | INFO     | mean x: 1745120212.6076922
[2025-04-20 00:43:49] 2025-04-20 04:43:32,050 | INFO     | mean y: 2307443.653846154
[2025-04-20 00:43:49] 2025-04-20 04:43:32,054 | INFO     | -- intersect: -79494970679.80913
[2025-04-20 00:43:49] 2025-04-20 04:43:32,054 | INFO     | intersect: -79494970679.80913
[2025-04-20 00:43:49] 2025-04-20 04:43:32,055 | INFO     | chi2: 2.1997284215672375
[2025-04-20 00:43:49] 2025-04-20 04:43:32,055 | INFO     | current chi2=2.1997284215672375 (change=53.481131565637284 %)
[2025-04-20 00:43:49] 2025-04-20 04:43:32,055 | INFO     | sum of square deviations: 605555918.4319985
[2025-04-20 00:43:49] 2025-04-20 04:43:32,056 | INFO     | sum of deviations: 9044641556.928003
[2025-04-20 00:43:49] 2025-04-20 04:43:32,056 | INFO     | mean x: 1745120365.112
[2025-04-20 00:43:49] 2025-04-20 04:43:32,056 | INFO     | mean y: 2351797.648
[2025-04-20 00:43:49] 2025-04-20 04:43:32,056 | INFO     | -- intersect: -26062934158.11274
[2025-04-20 00:43:49] 2025-04-20 04:43:32,056 | INFO     | intersect: -26062934158.11274
[2025-04-20 00:43:49] 2025-04-20 04:43:32,056 | INFO     | chi2: 0.9799288337564216
[2025-04-20 00:43:49] 2025-04-20 04:43:32,056 | INFO     | current chi2=0.9799288337564216 (change=55.452281102125646 %)
[2025-04-20 00:43:49] 2025-04-20 04:43:32,056 | INFO     | sum of square deviations: 535745688.3666659
[2025-04-20 00:43:49] 2025-04-20 04:43:32,057 | INFO     | sum of deviations: -8803296519.449997
[2025-04-20 00:43:49] 2025-04-20 04:43:32,057 | INFO     | mean x: 1745120517.6166666
[2025-04-20 00:43:49] 2025-04-20 04:43:32,057 | INFO     | mean y: 2390625.425
[2025-04-20 00:43:49] 2025-04-20 04:43:32,057 | INFO     | -- intersect: 28677961353.007267
[2025-04-20 00:43:49] 2025-04-20 04:43:32,057 | INFO     | intersect: 28677961353.007267
[2025-04-20 00:43:49] 2025-04-20 04:43:32,057 | INFO     | chi2: 0.07852600350025235
[2025-04-20 00:43:49] 2025-04-20 04:43:32,058 | INFO     | current chi2=0.07852600350025235 (change=91.98656057509463 %)
[2025-04-20 00:43:49] 2025-04-20 04:43:32,058 | INFO     | sum of square deviations: 471516958.29565203
[2025-04-20 00:43:49] 2025-04-20 04:43:32,062 | INFO     | sum of deviations: -9242312512.95652
[2025-04-20 00:43:49] 2025-04-20 04:43:32,063 | INFO     | mean x: 1745120670.1217391
[2025-04-20 00:43:49] 2025-04-20 04:43:32,063 | INFO     | mean y: 2391544.782608696
[2025-04-20 00:43:49] 2025-04-20 04:43:32,063 | INFO     | -- intersect: 34208903786.431385
[2025-04-20 00:43:49] 2025-04-20 04:43:32,063 | INFO     | intersect: 34208903786.431385
[2025-04-20 00:43:49] 2025-04-20 04:43:32,063 | INFO     | chi2: 0.04452579904213956
[2025-04-20 00:43:49] 2025-04-20 04:43:32,063 | INFO     | current chi2=0.04452579904213956 (change=43.29801969102315 %)
[2025-04-20 00:43:49] 2025-04-20 04:43:32,063 | INFO     | sum of square deviations: 412651072.19090927
[2025-04-20 00:43:49] 2025-04-20 04:43:32,064 | INFO     | sum of deviations: -8679891246.509089
[2025-04-20 00:43:49] 2025-04-20 04:43:32,064 | INFO     | mean x: 1745120822.6090908
[2025-04-20 00:43:49] 2025-04-20 04:43:32,064 | INFO     | mean y: 2390097.709090909
[2025-04-20 00:43:49] 2025-04-20 04:43:32,064 | INFO     | -- intersect: 36710059053.57104
[2025-04-20 00:43:49] 2025-04-20 04:43:32,064 | INFO     | intersect: 36710059053.57104
[2025-04-20 00:43:49] 2025-04-20 04:43:32,064 | INFO     | chi2: 0.041714381490412795
[2025-04-20 00:43:49] 2025-04-20 04:43:32,064 | INFO     | current chi2=0.041714381490412795 (change=6.31413160955521 %)
[2025-04-20 00:43:49] 2025-04-20 04:43:32,064 | INFO     | left removable region: 50
[2025-04-20 00:43:49] 2025-04-20 04:43:32,065 | INFO     | sum of square deviations: 152851243.54430372
[2025-04-20 00:43:49] 2025-04-20 04:43:32,065 | INFO     | sum of deviations: -630332135.886076
[2025-04-20 00:43:49] 2025-04-20 04:43:32,065 | INFO     | mean x: 1745121402.0759494
[2025-04-20 00:43:49] 2025-04-20 04:43:32,065 | INFO     | mean y: 2363666.481012658
[2025-04-20 00:43:49] 2025-04-20 04:43:32,065 | INFO     | -- intersect: 7198943002.338371
[2025-04-20 00:43:49] 2025-04-20 04:43:32,065 | INFO     | intersect: 7198943002.338371
[2025-04-20 00:43:49] 2025-04-20 04:43:32,065 | INFO     | chi2: 0.019775813922670703
[2025-04-20 00:43:49] 2025-04-20 04:43:32,065 | INFO     | -- intersect: 7198943002.338371
[2025-04-20 00:43:49] 2025-04-20 04:43:32,066 | INFO     | current memory leak: -4.12 B/s (using 79 data points, chi2=0.02)
[2025-04-20 00:43:49] 2025-04-20 04:43:32,069 | INFO     | ..............................
[2025-04-20 00:43:49] 2025-04-20 04:43:32,070 | INFO     | . Timing measurements:
[2025-04-20 00:43:49] 2025-04-20 04:43:32,070 | INFO     | . get job = 0 s
[2025-04-20 00:43:49] 2025-04-20 04:43:32,070 | INFO     | . initial setup = 4 s
[2025-04-20 00:43:49] 2025-04-20 04:43:32,070 | INFO     | . payload setup = 7 s
[2025-04-20 00:43:49] 2025-04-20 04:43:32,070 | INFO     | . stage-in = 0 s
[2025-04-20 00:43:49] 2025-04-20 04:43:32,070 | INFO     | . payload execution = 8223 s
[2025-04-20 00:43:49] 2025-04-20 04:43:32,070 | INFO     | . stage-out = 2 s
[2025-04-20 00:43:49] 2025-04-20 04:43:32,070 | INFO     | . log creation = 0 s
[2025-04-20 00:43:49] 2025-04-20 04:43:32,070 | INFO     | ..............................
[2025-04-20 00:43:49] 2025-04-20 04:43:32,262 | INFO     | 
[2025-04-20 00:43:49] 2025-04-20 04:43:32,262 | INFO     | job summary report
[2025-04-20 00:43:49] 2025-04-20 04:43:32,262 | INFO     | --------------------------------------------------
[2025-04-20 00:43:49] 2025-04-20 04:43:32,262 | INFO     | PanDA job id: 6608072208
[2025-04-20 00:43:49] 2025-04-20 04:43:32,262 | INFO     | task id: 44075483
[2025-04-20 00:43:49] 2025-04-20 04:43:32,262 | INFO     | errors: (none)
[2025-04-20 00:43:49] 2025-04-20 04:43:32,263 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-20 00:43:49] 2025-04-20 04:43:32,263 | INFO     | pilot state: finished 
[2025-04-20 00:43:49] 2025-04-20 04:43:32,263 | INFO     | transexitcode: 0
[2025-04-20 00:43:49] 2025-04-20 04:43:32,263 | INFO     | exeerrorcode: 0
[2025-04-20 00:43:49] 2025-04-20 04:43:32,263 | INFO     | exeerrordiag: 
[2025-04-20 00:43:49] 2025-04-20 04:43:32,263 | INFO     | exitcode: 0
[2025-04-20 00:43:49] 2025-04-20 04:43:32,263 | INFO     | exitmsg: OK
[2025-04-20 00:43:49] 2025-04-20 04:43:32,263 | INFO     | cpuconsumptiontime: 38932 s
[2025-04-20 00:43:49] 2025-04-20 04:43:32,263 | INFO     | nevents: 400
[2025-04-20 00:43:49] 2025-04-20 04:43:32,263 | INFO     | neventsw: 0
[2025-04-20 00:43:49] 2025-04-20 04:43:32,263 | INFO     | pid: 3286489
[2025-04-20 00:43:49] 2025-04-20 04:43:32,263 | INFO     | pgrp: 3286489
[2025-04-20 00:43:49] 2025-04-20 04:43:32,263 | INFO     | corecount: 9
[2025-04-20 00:43:49] 2025-04-20 04:43:32,263 | INFO     | event service: False
[2025-04-20 00:43:49] 2025-04-20 04:43:32,263 | INFO     | sizes: {0: 2426652, 1: 2426851, 5: 2427057, 11: 2427113, 8235: 2454650, 8236: 2454649, 8238: 2463774, 8239: 2463830, 8252: 2464000}
[2025-04-20 00:43:49] 2025-04-20 04:43:32,263 | INFO     | --------------------------------------------------
[2025-04-20 00:43:49] 2025-04-20 04:43:32,263 | INFO     | 
[2025-04-20 00:43:49] 2025-04-20 04:43:32,264 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-20 00:43:49] 2025-04-20 04:43:32,374 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-20 00:43:49] 2025-04-20 04:43:32,376 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-20 00:43:49] 2025-04-20 04:43:32,376 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-20 00:43:49] 2025-04-20 04:43:32,376 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-20 00:43:49] 2025-04-20 04:43:32,376 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-20 00:43:49] 2025-04-20 04:43:32,376 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-20 00:43:49] 2025-04-20 04:43:32,376 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-20 00:43:49] 2025-04-20 04:43:32,376 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-20 00:43:49] 2025-04-20 04:43:32,376 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-20 00:43:49] 2025-04-20 04:43:32,376 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-20 00:43:49] 2025-04-20 04:43:32,376 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-20 00:43:49] 2025-04-20 04:43:32,376 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-20 00:43:49] 2025-04-20 04:43:32,377 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-20 00:43:49] 2025-04-20 04:43:32,377 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-20 00:43:49] 2025-04-20 04:43:32,377 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-20 00:43:49] 2025-04-20 04:43:32,377 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-20 00:43:49] 2025-04-20 04:43:32,377 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-20 00:43:49] 2025-04-20 04:43:32,377 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-20 00:43:49] 2025-04-20 04:43:32,377 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-20 00:43:49] 2025-04-20 04:43:32,377 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-20 00:43:49] 2025-04-20 04:43:32,377 | INFO     | job 6608072208 has completed (purged errors)
[2025-04-20 00:43:49] 2025-04-20 04:43:32,377 | INFO     | overall cleanup function is called
[2025-04-20 00:43:49] 2025-04-20 04:43:33,397 | INFO     | --- collectZombieJob: --- 10, [3286489]
[2025-04-20 00:43:49] 2025-04-20 04:43:33,397 | INFO     | zombie collector waiting for pid 3286489
[2025-04-20 00:43:49] 2025-04-20 04:43:33,397 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-20 00:43:49] 2025-04-20 04:43:33,398 | INFO     | collected zombie processes
[2025-04-20 00:43:49] 2025-04-20 04:43:33,398 | INFO     | will attempt to kill all subprocesses of pid=3286489
[2025-04-20 00:43:49] 2025-04-20 04:43:34,007 | INFO     | process IDs to be killed: [3286489] (in reverse order)
[2025-04-20 00:43:49] 2025-04-20 04:43:34,236 | WARNING  | found no corresponding commands to process id(s)
[2025-04-20 00:43:49] 2025-04-20 04:43:34,236 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-20 00:43:49] 2025-04-20 04:43:34,276 | INFO     | did not find any defunct processes belonging to 3286489
[2025-04-20 00:43:49] 2025-04-20 04:43:34,303 | INFO     | did not find any defunct processes belonging to 3286489
[2025-04-20 00:43:49] 2025-04-20 04:43:34,303 | INFO     | ready for new job
[2025-04-20 00:43:49] 2025-04-20 04:43:34,304 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-20 00:43:49] 2025-04-20 04:43:34,311 | INFO     | **************************************
[2025-04-20 00:43:49] 2025-04-20 04:43:34,311 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-20 00:43:49] 2025-04-20 04:43:34,311 | INFO     | **************************************
[2025-04-20 00:43:49] 2025-04-20 04:43:34,312 | INFO     | 
[2025-04-20 00:43:49] 2025-04-20 04:43:34,331 | INFO     | architecture information:
[2025-04-20 00:43:49] 2025-04-20 04:43:34,339 | INFO     | executing command: cat /etc/os-release
[2025-04-20 00:43:49] 2025-04-20 04:43:34,391 | INFO     | cat /etc/os-release:
[2025-04-20 00:43:49] NAME="CentOS Linux"
[2025-04-20 00:43:49] VERSION="7 (Core)"
[2025-04-20 00:43:49] ID="centos"
[2025-04-20 00:43:49] ID_LIKE="rhel fedora"
[2025-04-20 00:43:49] VERSION_ID="7"
[2025-04-20 00:43:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-20 00:43:49] ANSI_COLOR="0;31"
[2025-04-20 00:43:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-20 00:43:49] HOME_URL="https://www.centos.org/"
[2025-04-20 00:43:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-20 00:43:49] 
[2025-04-20 00:43:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-20 00:43:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-20 00:43:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-20 00:43:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-20 00:43:49] 
[2025-04-20 00:43:49] 2025-04-20 04:43:34,392 | INFO     | **************************************
[2025-04-20 00:43:49] 2025-04-20 04:43:34,895 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-20 00:43:49] 2025-04-20 04:43:35,003 | INFO     | sufficient remaining disk space (75036098560 B)
[2025-04-20 00:43:49] 2025-04-20 04:43:35,003 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-20 00:43:49] 2025-04-20 04:43:35,003 | INFO     | current server update state: UPDATING_FINAL
[2025-04-20 00:43:49] 2025-04-20 04:43:35,003 | INFO     | update_server=False
[2025-04-20 00:43:49] 2025-04-20 04:43:35,004 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-20 00:43:49] 2025-04-20 04:43:35,031 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-20 00:43:49] 2025-04-20 04:43:35,031 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-20 00:43:49] 2025-04-20 04:43:35,032 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-20 00:43:49] 2025-04-20 04:43:35,032 | INFO     | will abort loop
[2025-04-20 00:43:49] 2025-04-20 04:43:35,194 | INFO     | PID=3279907 has CPU usage=12.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-04-20 00:43:49] 2025-04-20 04:43:35,194 | INFO     | .. there are 17 such processes running
[2025-04-20 00:43:49] 2025-04-20 04:43:35,194 | INFO     | found 0 job(s) in 20 queues
[2025-04-20 00:43:49] 2025-04-20 04:43:35,194 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-20 00:43:49] 2025-04-20 04:43:35,194 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-20 00:43:49] 2025-04-20 04:43:36,012 | INFO     | [job] retrieve thread has finished
[2025-04-20 00:43:49] 2025-04-20 04:43:36,037 | INFO     | [job] job monitor thread has finished
[2025-04-20 00:43:49] 2025-04-20 04:43:36,109 | INFO     | all payload control threads have been joined
[2025-04-20 00:43:49] 2025-04-20 04:43:36,151 | INFO     | [payload] validate_post thread has finished
[2025-04-20 00:43:49] 2025-04-20 04:43:36,155 | INFO     | [data] copytool_in thread has finished
[2025-04-20 00:43:49] 2025-04-20 04:43:36,174 | INFO     | [job] create_data_payload thread has finished
[2025-04-20 00:43:49] 2025-04-20 04:43:36,202 | INFO     | all data control threads have been joined
[2025-04-20 00:43:49] 2025-04-20 04:43:36,202 | INFO     | all job control threads have been joined
[2025-04-20 00:43:49] 2025-04-20 04:43:36,369 | INFO     | [payload] failed_post thread has finished
[2025-04-20 00:43:49] 2025-04-20 04:43:36,477 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-20 00:43:49] 2025-04-20 04:43:36,726 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-20 00:43:49] 2025-04-20 04:43:37,115 | INFO     | [payload] control thread has finished
[2025-04-20 00:43:49] 2025-04-20 04:43:37,212 | INFO     | [data] control thread has finished
[2025-04-20 00:43:49] 2025-04-20 04:43:37,218 | INFO     | [job] control thread has finished
[2025-04-20 00:43:49] 2025-04-20 04:43:37,301 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-20 00:43:49] 2025-04-20 04:43:37,490 | INFO     | [payload] validate_pre thread has finished
[2025-04-20 00:43:49] 2025-04-20 04:43:37,493 | INFO     | [payload] execute_payloads thread has finished
[2025-04-20 00:43:49] 2025-04-20 04:43:37,510 | INFO     | [job] validate thread has finished
[2025-04-20 00:43:49] 2025-04-20 04:43:38,104 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-20 00:43:49] 2025-04-20 04:43:38,307 | INFO     | [job] queue monitor thread has finished
[2025-04-20 00:43:49] 2025-04-20 04:43:38,488 | INFO     | [data] copytool_out thread has finished
[2025-04-20 00:43:49] 2025-04-20 04:43:42,154 | INFO     | [data] queue_monitor thread has finished
[2025-04-20 00:43:49] 2025-04-20 04:43:42,672 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140218796463936)>', '<ExcThread(monitor, started 140218309003008)>']
[2025-04-20 00:43:49] 2025-04-20 04:43:43,282 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-20 00:43:49] 2025-04-20 04:43:43,282 | INFO     | [monitor] control thread has ended
[2025-04-20 00:43:49] 2025-04-20 04:43:47,698 | INFO     | all workflow threads have been joined
[2025-04-20 00:43:49] 2025-04-20 04:43:47,698 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-20 00:43:49] 2025-04-20 04:43:47,699 | INFO     | traces error code: 0
[2025-04-20 00:43:49] 2025-04-20 04:43:47,699 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-20 00:43:49] 2025-04-20 04:43:48,912 [wrapper] ==== pilot stdout END ====
[2025-04-20 00:43:49] 2025-04-20 04:43:48,926 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-20 00:43:49] 2025-04-20 04:43:48,940 [wrapper] pilotpid: 3279907
[2025-04-20 00:43:49] 2025-04-20 04:43:48,954 [wrapper] Pilot exit status: 0
[2025-04-20 00:43:49] 2025-04-20 04:43:49,054 [wrapper] pandaids: 6608072208
[2025-04-20 00:43:49] 2025-04-20 04:43:49,181 [wrapper] cleanup supervisor_pilot 3644192 3279908
[2025-04-20 00:43:49] 2025-04-20 04:43:49,184 [wrapper] Test setup, not cleaning
[2025-04-20 00:43:49] 2025-04-20 04:43:49,186 [wrapper] apfmon messages muted
[2025-04-20 00:43:49] 2025-04-20 04:43:49,188 [wrapper] ==== wrapper stdout END ====
[2025-04-20 00:43:49] 2025-04-20 04:43:49,191 [wrapper] ==== wrapper stderr END ====
[2025-04-20 00:43:49]  *** Error codes and diagnostics ***
[2025-04-20 00:43:49]     "exeErrorCode": 0,
[2025-04-20 00:43:49]     "exeErrorDiag": "",
[2025-04-20 00:43:49]     "pilotErrorCode": 0,
[2025-04-20 00:43:49]     "pilotErrorDiag": "",
[2025-04-20 00:43:49]  *** Listing of results directory ***
[2025-04-20 00:43:49] total 414392
[2025-04-20 00:43:49] -rw-r--r--. 1 boincer umatlas    495897 Apr 19 14:50 pilot3.tar.gz
[2025-04-20 00:43:49] -rwx------. 1 boincer umatlas     37140 Apr 19 15:10 runpilot2-wrapper.sh
[2025-04-20 00:43:49] -rw-r--r--. 1 boincer umatlas      5111 Apr 19 15:10 queuedata.json
[2025-04-20 00:43:49] -rw-r--r--. 1 boincer umatlas       100 Apr 19 22:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-20 00:43:49] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 19 22:25 run_atlas
[2025-04-20 00:43:49] -rw-r--r--. 1 boincer umatlas       105 Apr 19 22:25 job.xml
[2025-04-20 00:43:49] -rw-r--r--. 2 boincer umatlas 221280973 Apr 19 22:25 EVNT.44075481._003400.pool.root.1
[2025-04-20 00:43:49] -rw-r--r--. 2 boincer umatlas     17569 Apr 19 22:25 start_atlas.sh
[2025-04-20 00:43:49] drwxrwx--x. 2 boincer umatlas      4096 Apr 19 22:25 shared
[2025-04-20 00:43:49] -rw-r--r--. 2 boincer umatlas    508887 Apr 19 22:25 input.tar.gz
[2025-04-20 00:43:49] -rw-r--r--. 1 boincer umatlas         0 Apr 19 22:25 boinc_lockfile
[2025-04-20 00:43:49] -rw-r--r--. 1 boincer umatlas      2578 Apr 19 22:25 pandaJob.out
[2025-04-20 00:43:49] -rw-------. 1 boincer umatlas       467 Apr 19 22:25 setup.sh.local
[2025-04-20 00:43:49] -rw-------. 1 boincer umatlas    991300 Apr 19 22:25 agis_schedconf.cvmfs.json
[2025-04-20 00:43:49] -rw-------. 1 boincer umatlas   1618536 Apr 19 22:25 agis_ddmendpoints.agis.ALL.json
[2025-04-20 00:43:49] drwx------. 4 boincer umatlas      4096 Apr 19 22:25 pilot3
[2025-04-20 00:43:49] -rw-r--r--. 1 boincer umatlas      6840 Apr 20 00:39 init_data.xml
[2025-04-20 00:43:49] -rw-------. 1 boincer umatlas 197082985 Apr 20 00:42 HITS.44075483._087184.pool.root.1
[2025-04-20 00:43:49] -rw-r--r--. 1 boincer umatlas       530 Apr 20 00:42 boinc_task_state.xml
[2025-04-20 00:43:49] -rw-------. 1 boincer umatlas        95 Apr 20 00:43 pilot_heartbeat.json
[2025-04-20 00:43:49] -rw-------. 1 boincer umatlas      1051 Apr 20 00:43 memory_monitor_summary.json
[2025-04-20 00:43:49] -rw-------. 1 boincer umatlas    348978 Apr 20 00:43 log.44075483._087184.job.log.tgz.1
[2025-04-20 00:43:49] -rw-------. 1 boincer umatlas      7716 Apr 20 00:43 heartbeat.json
[2025-04-20 00:43:49] -rw-------. 1 boincer umatlas      4935 Apr 20 00:43 pilotlog.txt
[2025-04-20 00:43:49] -rw-r--r--. 1 boincer umatlas        27 Apr 20 00:43 wrapper_checkpoint.txt
[2025-04-20 00:43:49] -rw-r--r--. 1 boincer umatlas      8192 Apr 20 00:43 boinc_mmap_file
[2025-04-20 00:43:49] -rw-------. 1 boincer umatlas    703334 Apr 20 00:43 log.44075483._087184.job.log.1
[2025-04-20 00:43:49] -rw-------. 1 boincer umatlas       357 Apr 20 00:43 output.list
[2025-04-20 00:43:49] -rw-r--r--. 1 boincer umatlas       620 Apr 20 00:43 runtime_log
[2025-04-20 00:43:49] -rw-------. 1 boincer umatlas   1075200 Apr 20 00:43 result.tar.gz
[2025-04-20 00:43:49] -rw-------. 1 boincer umatlas       653 Apr 20 00:43 zJ4MDm9kSQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmLiiLDmXfOmim.diag
[2025-04-20 00:43:49] -rw-r--r--. 1 boincer umatlas     11423 Apr 20 00:43 runtime_log.err
[2025-04-20 00:43:49] -rw-r--r--. 1 boincer umatlas     21012 Apr 20 00:43 stderr.txt
[2025-04-20 00:43:49] HITS file was successfully produced:
[2025-04-20 00:43:49] -rw-------. 1 boincer umatlas 197082985 Apr 20 00:42 shared/HITS.pool.root.1
[2025-04-20 00:43:49]  *** Contents of shared directory: ***
[2025-04-20 00:43:49] total 410136
[2025-04-20 00:43:49] -rw-r--r--. 2 boincer umatlas 221280973 Apr 19 22:25 ATLAS.root_0
[2025-04-20 00:43:49] -rw-r--r--. 2 boincer umatlas     17569 Apr 19 22:25 start_atlas.sh
[2025-04-20 00:43:49] -rw-r--r--. 2 boincer umatlas    508887 Apr 19 22:25 input.tar.gz
[2025-04-20 00:43:49] -rw-------. 1 boincer umatlas 197082985 Apr 20 00:42 HITS.pool.root.1
[2025-04-20 00:43:49] -rw-------. 1 boincer umatlas   1075200 Apr 20 00:43 result.tar.gz
00:43:51 (3276330): run_atlas exited; CPU time 39152.370598
00:43:51 (3276330): called boinc_finish(0)

</stderr_txt>
]]>

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