Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
09:28:15 (1745232): wrapper (7.7.26015): starting
09:28:15 (1745232): wrapper: running run_atlas (--nthreads 3)
[2025-04-20 09:28:15] Arguments: --nthreads 3
[2025-04-20 09:28:15] Threads: 3
[2025-04-20 09:28:15] Checking for CVMFS
[2025-04-20 09:28:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-20 09:28:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-20 09:28:15] Running cvmfs_config stat atlas.cern.ch
[2025-04-20 09:28:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-20 09:28:15] 2.9.2.0 2931 5856 69624 145066 3 56 27237071 36864000 0 130560 0 4516355 99.992 1470058 7758 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-04-20 09:28:15] CVMFS is ok
[2025-04-20 09:28:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-20 09:28:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-20 09:28:15] Further information can be found at the LHC@home message board.
[2025-04-20 09:28:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-20 09:28:15] Checking for apptainer binary...
[2025-04-20 09:28:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-20 09:28:15] Running /usr/bin/apptainer --version
[2025-04-20 09:28:15] apptainer version 1.3.6-6.1
[2025-04-20 09:28:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-20 09:28:15] belleA115a
[2025-04-20 09:28:15] apptainer works
[2025-04-20 09:28:15] Set ATHENA_PROC_NUMBER=3
[2025-04-20 09:28:15] Set ATHENA_CORE_NUMBER=3
[2025-04-20 09:28:15] Starting ATLAS job with PandaID=6608355386
[2025-04-20 09:28:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-20 11:08:53]  *** The last 200 lines of the pilot log: ***
[2025-04-20 11:08:53]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-20 11:08:53]  is_altstaged=None
[2025-04-20 11:08:53]  is_tar=False
[2025-04-20 11:08:53]  lfn=log.44075483._089221.job.log.tgz.1
[2025-04-20 11:08:53]  mtime=0
[2025-04-20 11:08:53]  protocol_id=None
[2025-04-20 11:08:53]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-20 11:08:53]  replicas=None
[2025-04-20 11:08:53]  scope=mc23_13p6TeV
[2025-04-20 11:08:53]  status=None
[2025-04-20 11:08:53]  status_code=0
[2025-04-20 11:08:53]  storage_token=
[2025-04-20 11:08:53]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6608355386/log.44075483._089221.job.log.tgz.1
[2025-04-20 11:08:53]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c4/40/log.44075483._089221.job.log.tgz.1
[2025-04-20 11:08:53]  workdir=None
[2025-04-20 11:08:53] ]
[2025-04-20 11:08:53] 2025-04-20 09:08:26,068 | INFO     | transferring file log.44075483._089221.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6608355386/log.44075483._089221.job.log.tgz.1 to /local/data/boinc/
[2025-04-20 11:08:53] 2025-04-20 09:08:26,068 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6608355386/log.44075483._089221.job.log.tgz.1 /local/data/boinc/slots/0/log.44075483._0892
[2025-04-20 11:08:53] 2025-04-20 09:08:26,081 | INFO     | adding to output.list: log.44075483._089221.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c4/40/log.44075483._089221.job.log.tg
[2025-04-20 11:08:53] 2025-04-20 09:08:26,081 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-20 11:08:53] 2025-04-20 09:08:26,081 | INFO     | summary of transferred files:
[2025-04-20 11:08:53] 2025-04-20 09:08:26,081 | INFO     |  -- lfn=log.44075483._089221.job.log.tgz.1, status_code=0, status=transferred
[2025-04-20 11:08:53] 2025-04-20 09:08:26,081 | INFO     | stage-out finished correctly
[2025-04-20 11:08:53] 2025-04-20 09:08:26,113 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-20 11:08:53] 2025-04-20 09:08:26,722 | INFO     | monitor loop #463: job 0:6608355386 is in state 'finished'
[2025-04-20 11:08:53] 2025-04-20 09:08:26,722 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 11:08:53] 2025-04-20 09:08:28,174 | INFO     | job 6608355386 has state=finished
[2025-04-20 11:08:53] 2025-04-20 09:08:28,174 | INFO     | preparing for final server update for job 6608355386 in state='finished'
[2025-04-20 11:08:53] 2025-04-20 09:08:28,778 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-04-20 11:08:53] 2025-04-20 09:08:28,779 | INFO     | this job has now completed (state=finished)
[2025-04-20 11:08:53] 2025-04-20 09:08:28,779 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-20 11:08:53] 2025-04-20 09:08:28,779 | INFO     | log transfer has been attempted: DONE
[2025-04-20 11:08:53] 2025-04-20 09:08:28,780 | INFO     | job 6608355386 has finished - writing final server update
[2025-04-20 11:08:53] 2025-04-20 09:08:28,780 | INFO     | total number of processed events: 400 (read)
[2025-04-20 11:08:53] 2025-04-20 09:08:28,781 | INFO     | executing command: lscpu
[2025-04-20 11:08:53] 2025-04-20 09:08:28,794 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-20 11:08:53] 2025-04-20 09:08:29,225 | INFO     | monitor loop #464: job 0:6608355386 is in state 'finished'
[2025-04-20 11:08:53] 2025-04-20 09:08:29,226 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 11:08:53] 2025-04-20 09:08:31,730 | INFO     | monitor loop #465: job 0:6608355386 is in state 'finished'
[2025-04-20 11:08:53] 2025-04-20 09:08:31,730 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 11:08:53] 2025-04-20 09:08:32,853 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-20 11:08:53] 2025-04-20 09:08:32,853 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6608355386/memory_monitor_summary.json (trf name=prmon)
[2025-04-20 11:08:53] 2025-04-20 09:08:32,854 | INFO     | extracted standard info from prmon json
[2025-04-20 11:08:53] 2025-04-20 09:08:32,854 | INFO     | extracted standard memory fields from prmon json
[2025-04-20 11:08:53] 2025-04-20 09:08:32,854 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-20 11:08:53] 2025-04-20 09:08:32,854 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-20 11:08:53] 2025-04-20 09:08:32,854 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-20 11:08:53] 2025-04-20 09:08:32,855 | INFO     | fitting pss+swap vs Time
[2025-04-20 11:08:53] 2025-04-20 09:08:32,855 | INFO     | sum of square deviations: 233641590.0
[2025-04-20 11:08:53] 2025-04-20 09:08:32,855 | INFO     | sum of deviations: -1066290125.9999983
[2025-04-20 11:08:53] 2025-04-20 09:08:32,855 | INFO     | mean x: 1745137180.0
[2025-04-20 11:08:53] 2025-04-20 09:08:32,855 | INFO     | mean y: 2466838.131868132
[2025-04-20 11:08:53] 2025-04-20 09:08:32,855 | INFO     | -- intersect: 7966898785.155863
[2025-04-20 11:08:53] 2025-04-20 09:08:32,855 | INFO     | intersect: 7966898785.155863
[2025-04-20 11:08:53] 2025-04-20 09:08:32,855 | INFO     | chi2: 1.6608297384331467
[2025-04-20 11:08:53] 2025-04-20 09:08:32,855 | INFO     | -- intersect: 7966898785.155863
[2025-04-20 11:08:53] 2025-04-20 09:08:32,855 | INFO     | current memory leak: -4.56 B/s (using 91 data points, chi2=1.66)
[2025-04-20 11:08:53] 2025-04-20 09:08:32,856 | INFO     | ..............................
[2025-04-20 11:08:53] 2025-04-20 09:08:32,856 | INFO     | . Timing measurements:
[2025-04-20 11:08:53] 2025-04-20 09:08:32,856 | INFO     | . get job = 0 s
[2025-04-20 11:08:53] 2025-04-20 09:08:32,856 | INFO     | . initial setup = 1 s
[2025-04-20 11:08:53] 2025-04-20 09:08:32,856 | INFO     | . payload setup = 5 s
[2025-04-20 11:08:53] 2025-04-20 09:08:32,856 | INFO     | . stage-in = 0 s
[2025-04-20 11:08:53] 2025-04-20 09:08:32,856 | INFO     | . payload execution = 5973 s
[2025-04-20 11:08:53] 2025-04-20 09:08:32,856 | INFO     | . stage-out = 0 s
[2025-04-20 11:08:53] 2025-04-20 09:08:32,856 | INFO     | . log creation = 0 s
[2025-04-20 11:08:53] 2025-04-20 09:08:32,856 | INFO     | ..............................
[2025-04-20 11:08:53] 2025-04-20 09:08:33,251 | INFO     | 
[2025-04-20 11:08:53] 2025-04-20 09:08:33,252 | INFO     | job summary report
[2025-04-20 11:08:53] 2025-04-20 09:08:33,252 | INFO     | --------------------------------------------------
[2025-04-20 11:08:53] 2025-04-20 09:08:33,252 | INFO     | PanDA job id: 6608355386
[2025-04-20 11:08:53] 2025-04-20 09:08:33,252 | INFO     | task id: 44075483
[2025-04-20 11:08:53] 2025-04-20 09:08:33,253 | INFO     | errors: (none)
[2025-04-20 11:08:53] 2025-04-20 09:08:33,253 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-20 11:08:53] 2025-04-20 09:08:33,253 | INFO     | pilot state: finished 
[2025-04-20 11:08:53] 2025-04-20 09:08:33,253 | INFO     | transexitcode: 0
[2025-04-20 11:08:53] 2025-04-20 09:08:33,253 | INFO     | exeerrorcode: 0
[2025-04-20 11:08:53] 2025-04-20 09:08:33,253 | INFO     | exeerrordiag: 
[2025-04-20 11:08:53] 2025-04-20 09:08:33,253 | INFO     | exitcode: 0
[2025-04-20 11:08:53] 2025-04-20 09:08:33,254 | INFO     | exitmsg: OK
[2025-04-20 11:08:53] 2025-04-20 09:08:33,254 | INFO     | cpuconsumptiontime: 15882 s
[2025-04-20 11:08:53] 2025-04-20 09:08:33,254 | INFO     | nevents: 400
[2025-04-20 11:08:53] 2025-04-20 09:08:33,254 | INFO     | neventsw: 0
[2025-04-20 11:08:53] 2025-04-20 09:08:33,254 | INFO     | pid: 1755327
[2025-04-20 11:08:53] 2025-04-20 09:08:33,254 | INFO     | pgrp: 1755327
[2025-04-20 11:08:53] 2025-04-20 09:08:33,254 | INFO     | corecount: 3
[2025-04-20 11:08:53] 2025-04-20 09:08:33,255 | INFO     | event service: False
[2025-04-20 11:08:53] 2025-04-20 09:08:33,255 | INFO     | sizes: {0: 2426826, 5: 2427032, 10: 2427088, 5983: 2453765, 5985: 2462768, 5991: 2462882}
[2025-04-20 11:08:53] 2025-04-20 09:08:33,255 | INFO     | --------------------------------------------------
[2025-04-20 11:08:53] 2025-04-20 09:08:33,255 | INFO     | 
[2025-04-20 11:08:53] 2025-04-20 09:08:33,255 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-04-20 11:08:53] 2025-04-20 09:08:33,268 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-20 11:08:53] 2025-04-20 09:08:33,269 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-20 11:08:53] 2025-04-20 09:08:33,269 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-20 11:08:53] 2025-04-20 09:08:33,269 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-20 11:08:53] 2025-04-20 09:08:33,269 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-20 11:08:53] 2025-04-20 09:08:33,269 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-20 11:08:53] 2025-04-20 09:08:33,269 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-20 11:08:53] 2025-04-20 09:08:33,269 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-20 11:08:53] 2025-04-20 09:08:33,269 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-20 11:08:53] 2025-04-20 09:08:33,269 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-20 11:08:53] 2025-04-20 09:08:33,269 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-20 11:08:53] 2025-04-20 09:08:33,269 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-20 11:08:53] 2025-04-20 09:08:33,269 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-20 11:08:53] 2025-04-20 09:08:33,269 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-20 11:08:53] 2025-04-20 09:08:33,269 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-20 11:08:53] 2025-04-20 09:08:33,269 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-20 11:08:53] 2025-04-20 09:08:33,269 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-20 11:08:53] 2025-04-20 09:08:33,269 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-20 11:08:53] 2025-04-20 09:08:33,269 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-20 11:08:53] 2025-04-20 09:08:33,269 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-20 11:08:53] 2025-04-20 09:08:33,269 | INFO     | job 6608355386 has completed (purged errors)
[2025-04-20 11:08:53] 2025-04-20 09:08:33,269 | INFO     | overall cleanup function is called
[2025-04-20 11:08:53] 2025-04-20 09:08:34,276 | INFO     | --- collectZombieJob: --- 10, [1755327]
[2025-04-20 11:08:53] 2025-04-20 09:08:34,276 | INFO     | zombie collector waiting for pid 1755327
[2025-04-20 11:08:53] 2025-04-20 09:08:34,277 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-20 11:08:53] 2025-04-20 09:08:34,277 | INFO     | collected zombie processes
[2025-04-20 11:08:53] 2025-04-20 09:08:34,277 | INFO     | will attempt to kill all subprocesses of pid=1755327
[2025-04-20 11:08:53] 2025-04-20 09:08:34,316 | INFO     | process IDs to be killed: [1755327] (in reverse order)
[2025-04-20 11:08:53] 2025-04-20 09:08:34,340 | WARNING  | found no corresponding commands to process id(s)
[2025-04-20 11:08:53] 2025-04-20 09:08:34,341 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-20 11:08:53] 2025-04-20 09:08:34,342 | INFO     | did not find any defunct processes belonging to 1755327
[2025-04-20 11:08:53] 2025-04-20 09:08:34,343 | INFO     | did not find any defunct processes belonging to 1755327
[2025-04-20 11:08:53] 2025-04-20 09:08:34,343 | INFO     | ready for new job
[2025-04-20 11:08:53] 2025-04-20 09:08:34,343 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-20 11:08:53] 2025-04-20 09:08:34,343 | INFO     | **************************************
[2025-04-20 11:08:53] 2025-04-20 09:08:34,343 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-20 11:08:53] 2025-04-20 09:08:34,343 | INFO     | **************************************
[2025-04-20 11:08:53] 2025-04-20 09:08:34,343 | INFO     | 
[2025-04-20 11:08:53] 2025-04-20 09:08:34,344 | INFO     | architecture information:
[2025-04-20 11:08:53] 2025-04-20 09:08:34,344 | INFO     | executing command: cat /etc/os-release
[2025-04-20 11:08:53] 2025-04-20 09:08:34,353 | INFO     | cat /etc/os-release:
[2025-04-20 11:08:53] NAME="CentOS Linux"
[2025-04-20 11:08:53] VERSION="7 (Core)"
[2025-04-20 11:08:53] ID="centos"
[2025-04-20 11:08:53] ID_LIKE="rhel fedora"
[2025-04-20 11:08:53] VERSION_ID="7"
[2025-04-20 11:08:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-20 11:08:53] ANSI_COLOR="0;31"
[2025-04-20 11:08:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-20 11:08:53] HOME_URL="https://www.centos.org/"
[2025-04-20 11:08:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-20 11:08:53] 
[2025-04-20 11:08:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-20 11:08:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-20 11:08:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-20 11:08:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-20 11:08:53] 
[2025-04-20 11:08:53] 2025-04-20 09:08:34,353 | INFO     | **************************************
[2025-04-20 11:08:53] 2025-04-20 09:08:34,856 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-04-20 11:08:53] 2025-04-20 09:08:34,869 | INFO     | sufficient remaining disk space (328410857472 B)
[2025-04-20 11:08:53] 2025-04-20 09:08:34,869 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-20 11:08:53] 2025-04-20 09:08:34,869 | INFO     | current server update state: UPDATING_FINAL
[2025-04-20 11:08:53] 2025-04-20 09:08:34,870 | INFO     | update_server=False
[2025-04-20 11:08:53] 2025-04-20 09:08:34,870 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-20 11:08:53] 2025-04-20 09:08:34,870 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-20 11:08:53] 2025-04-20 09:08:34,870 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-20 11:08:53] 2025-04-20 09:08:34,930 | INFO     | found 0 job(s) in 20 queues
[2025-04-20 11:08:53] 2025-04-20 09:08:34,930 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-20 11:08:53] 2025-04-20 09:08:34,930 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-20 11:08:53] 2025-04-20 09:08:35,085 | INFO     | all data control threads have been joined
[2025-04-20 11:08:53] 2025-04-20 09:08:35,238 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-20 11:08:53] 2025-04-20 09:08:35,239 | INFO     | aborting loop
[2025-04-20 11:08:53] 2025-04-20 09:08:35,438 | INFO     | all payload control threads have been joined
[2025-04-20 11:08:53] 2025-04-20 09:08:35,699 | INFO     | all job control threads have been joined
[2025-04-20 11:08:53] 2025-04-20 09:08:35,874 | INFO     | [job] retrieve thread has finished
[2025-04-20 11:08:53] 2025-04-20 09:08:35,874 | INFO     | [job] queue monitor thread has finished
[2025-04-20 11:08:53] 2025-04-20 09:08:35,920 | INFO     | [payload] execute_payloads thread has finished
[2025-04-20 11:08:53] 2025-04-20 09:08:35,948 | INFO     | [job] create_data_payload thread has finished
[2025-04-20 11:08:53] 2025-04-20 09:08:36,091 | INFO     | [data] control thread has finished
[2025-04-20 11:08:53] 2025-04-20 09:08:36,237 | INFO     | [data] copytool_in thread has finished
[2025-04-20 11:08:53] 2025-04-20 09:08:36,243 | INFO     | [job] job monitor thread has finished
[2025-04-20 11:08:53] 2025-04-20 09:08:36,444 | INFO     | [payload] control thread has finished
[2025-04-20 11:08:53] 2025-04-20 09:08:36,655 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-20 11:08:53] 2025-04-20 09:08:36,660 | INFO     | [payload] validate_post thread has finished
[2025-04-20 11:08:53] 2025-04-20 09:08:36,689 | INFO     | [payload] failed_post thread has finished
[2025-04-20 11:08:53] 2025-04-20 09:08:36,705 | INFO     | [job] control thread has finished
[2025-04-20 11:08:53] 2025-04-20 09:08:36,876 | INFO     | [data] copytool_out thread has finished
[2025-04-20 11:08:53] 2025-04-20 09:08:37,259 | INFO     | [job] validate thread has finished
[2025-04-20 11:08:53] 2025-04-20 09:08:37,299 | INFO     | [payload] validate_pre thread has finished
[2025-04-20 11:08:53] 2025-04-20 09:08:40,661 | INFO     | [data] queue_monitor thread has finished
[2025-04-20 11:08:53] 2025-04-20 09:08:45,386 | INFO     | job.realtimelogging is not enabled
[2025-04-20 11:08:53] 2025-04-20 09:08:46,391 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-20 11:08:53] 2025-04-20 09:08:48,500 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140293565417280)>', '<ExcThread(monitor, started 140292942452480)>']
[2025-04-20 11:08:53] 2025-04-20 09:08:49,004 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-20 11:08:53] 2025-04-20 09:08:49,005 | INFO     | [monitor] control thread has ended
[2025-04-20 11:08:53] 2025-04-20 09:08:53,526 | INFO     | all workflow threads have been joined
[2025-04-20 11:08:53] 2025-04-20 09:08:53,527 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-20 11:08:53] 2025-04-20 09:08:53,527 | INFO     | traces error code: 0
[2025-04-20 11:08:53] 2025-04-20 09:08:53,528 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-20 11:08:53] 2025-04-20 09:08:53,573 [wrapper] ==== pilot stdout END ====
[2025-04-20 11:08:53] 2025-04-20 09:08:53,577 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-20 11:08:53] 2025-04-20 09:08:53,580 [wrapper] pilotpid: 1748890
[2025-04-20 11:08:53] 2025-04-20 09:08:53,583 [wrapper] Pilot exit status: 0
[2025-04-20 11:08:53] 2025-04-20 09:08:53,591 [wrapper] pandaids: 6608355386
[2025-04-20 11:08:53] 2025-04-20 09:08:53,607 [wrapper] cleanup supervisor_pilot 1767499 1748891
[2025-04-20 11:08:53] 2025-04-20 09:08:53,610 [wrapper] Test setup, not cleaning
[2025-04-20 11:08:53] 2025-04-20 09:08:53,613 [wrapper] apfmon messages muted
[2025-04-20 11:08:53] 2025-04-20 09:08:53,616 [wrapper] ==== wrapper stdout END ====
[2025-04-20 11:08:53] 2025-04-20 09:08:53,618 [wrapper] ==== wrapper stderr END ====
[2025-04-20 11:08:53]  *** Error codes and diagnostics ***
[2025-04-20 11:08:53]     "exeErrorCode": 0,
[2025-04-20 11:08:53]     "exeErrorDiag": "",
[2025-04-20 11:08:53]     "pilotErrorCode": 0,
[2025-04-20 11:08:53]     "pilotErrorDiag": "",
[2025-04-20 11:08:53]  *** Listing of results directory ***
[2025-04-20 11:08:53] total 416696
[2025-04-20 11:08:53] -rw-r--r-- 1 boinc boinc    495897 Apr 20 00:31 pilot3.tar.gz
[2025-04-20 11:08:53] -rwx------ 1 boinc boinc     37140 Apr 20 00:48 runpilot2-wrapper.sh
[2025-04-20 11:08:53] -rw-r--r-- 1 boinc boinc      5111 Apr 20 00:48 queuedata.json
[2025-04-20 11:08:53] -rw-r--r-- 1 boinc boinc       100 Apr 20 09:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-20 11:08:53] -rwxr-xr-x 1 boinc boinc      7986 Apr 20 09:28 run_atlas
[2025-04-20 11:08:53] -rw-r--r-- 1 boinc boinc       105 Apr 20 09:28 job.xml
[2025-04-20 11:08:53] -rw-r--r-- 2 boinc boinc 225464915 Apr 20 09:28 EVNT.44075481._003476.pool.root.1
[2025-04-20 11:08:53] -rw-r--r-- 1 boinc boinc      6684 Apr 20 09:28 init_data.xml
[2025-04-20 11:08:53] drwxrwx--x 2 boinc boinc      4096 Apr 20 09:28 shared
[2025-04-20 11:08:53] -rw-r--r-- 2 boinc boinc    508888 Apr 20 09:28 input.tar.gz
[2025-04-20 11:08:53] -rw-r--r-- 2 boinc boinc     17569 Apr 20 09:28 start_atlas.sh
[2025-04-20 11:08:53] -rw-r--r-- 1 boinc boinc         0 Apr 20 09:28 boinc_lockfile
[2025-04-20 11:08:53] -rw-r--r-- 1 boinc boinc      2578 Apr 20 09:28 pandaJob.out
[2025-04-20 11:08:53] -rw------- 1 boinc boinc       424 Apr 20 09:28 setup.sh.local
[2025-04-20 11:08:53] -rw------- 1 boinc boinc    991292 Apr 20 09:28 agis_schedconf.cvmfs.json
[2025-04-20 11:08:53] -rw------- 1 boinc boinc   1618536 Apr 20 09:28 agis_ddmendpoints.agis.ALL.json
[2025-04-20 11:08:53] drwx------ 4 boinc boinc      4096 Apr 20 09:28 pilot3
[2025-04-20 11:08:53] -rw------- 1 boinc boinc        95 Apr 20 11:07 pilot_heartbeat.json
[2025-04-20 11:08:53] -rw------- 1 boinc boinc 195733073 Apr 20 11:08 HITS.44075483._089221.pool.root.1
[2025-04-20 11:08:53] -rw-r--r-- 1 boinc boinc       529 Apr 20 11:08 boinc_task_state.xml
[2025-04-20 11:08:53] -rw------- 1 boinc boinc      1018 Apr 20 11:08 memory_monitor_summary.json
[2025-04-20 11:08:53] -rw------- 1 boinc boinc    239719 Apr 20 11:08 log.44075483._089221.job.log.tgz.1
[2025-04-20 11:08:53] -rw------- 1 boinc boinc      7667 Apr 20 11:08 heartbeat.json
[2025-04-20 11:08:53] -rw-r--r-- 1 boinc boinc      8192 Apr 20 11:08 boinc_mmap_file
[2025-04-20 11:08:53] -rw-r--r-- 1 boinc boinc        27 Apr 20 11:08 wrapper_checkpoint.txt
[2025-04-20 11:08:53] -rw------- 1 boinc boinc      4429 Apr 20 11:08 pilotlog.txt
[2025-04-20 11:08:53] -rw------- 1 boinc boinc    575119 Apr 20 11:08 log.44075483._089221.job.log.1
[2025-04-20 11:08:53] -rw------- 1 boinc boinc       357 Apr 20 11:08 output.list
[2025-04-20 11:08:53] -rw-r--r-- 1 boinc boinc       620 Apr 20 11:08 runtime_log
[2025-04-20 11:08:53] -rw------- 1 boinc boinc    829440 Apr 20 11:08 result.tar.gz
[2025-04-20 11:08:53] -rw-r--r-- 1 boinc boinc     11119 Apr 20 11:08 runtime_log.err
[2025-04-20 11:08:53] -rw------- 1 boinc boinc       663 Apr 20 11:08 Yk8KDmEAWQ7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmu36KDmoxwXyn.diag
[2025-04-20 11:08:53] -rw-r--r-- 1 boinc boinc     21307 Apr 20 11:08 stderr.txt
[2025-04-20 11:08:53] HITS file was successfully produced:
[2025-04-20 11:08:53] -rw------- 1 boinc boinc 195733073 Apr 20 11:08 shared/HITS.pool.root.1
[2025-04-20 11:08:53]  *** Contents of shared directory: ***
[2025-04-20 11:08:53] total 412672
[2025-04-20 11:08:53] -rw-r--r-- 2 boinc boinc 225464915 Apr 20 09:28 ATLAS.root_0
[2025-04-20 11:08:53] -rw-r--r-- 2 boinc boinc    508888 Apr 20 09:28 input.tar.gz
[2025-04-20 11:08:53] -rw-r--r-- 2 boinc boinc     17569 Apr 20 09:28 start_atlas.sh
[2025-04-20 11:08:53] -rw------- 1 boinc boinc 195733073 Apr 20 11:08 HITS.pool.root.1
[2025-04-20 11:08:53] -rw------- 1 boinc boinc    829440 Apr 20 11:08 result.tar.gz
11:08:55 (1745232): run_atlas exited; CPU time 15912.868411
11:08:55 (1745232): called boinc_finish(0)

</stderr_txt>
]]>

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