Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:28:53 (1736744): wrapper (7.7.26015): starting
21:28:53 (1736744): wrapper: running run_atlas (--nthreads 8)
[2025-04-19 21:28:53] Arguments: --nthreads 8
[2025-04-19 21:28:53] Threads: 8
[2025-04-19 21:28:53] Checking for CVMFS
[2025-04-19 21:28:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 21:28:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 21:28:53] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 21:28:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 21:28:54] 2.12.6.0 876259 91103 210348 145057 0 153 27080657 32935936 24168 130560 0 131717834 99.702 115334553 24042 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-19 21:28:54] CVMFS is ok
[2025-04-19 21:28:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 21:28:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 21:28:55] Further information can be found at the LHC@home message board.
[2025-04-19 21:28:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 21:28:55] Checking for apptainer binary...
[2025-04-19 21:28:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 21:28:55] Running /usr/bin/apptainer --version
[2025-04-19 21:28:57] apptainer version 1.4.0-1.el9
[2025-04-19 21:28:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 21:28:57] c6-8-25-4.aglt2.org
[2025-04-19 21:28:57] apptainer works
[2025-04-19 21:28:57] Set ATHENA_PROC_NUMBER=8
[2025-04-19 21:28:57] Set ATHENA_CORE_NUMBER=8
[2025-04-19 21:28:58] Starting ATLAS job with PandaID=6608229774
[2025-04-19 21:28:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-20 00:34:09]  *** The last 200 lines of the pilot log: ***
[2025-04-20 00:34:09] 2025-04-20 04:33:51,449 | INFO     | sum of deviations: 96234265305.134
[2025-04-20 00:34:09] 2025-04-20 04:33:51,450 | INFO     | mean x: 1745118155.24581
[2025-04-20 00:34:09] 2025-04-20 04:33:51,450 | INFO     | mean y: 2358902.1787709496
[2025-04-20 00:34:09] 2025-04-20 04:33:51,450 | INFO     | -- intersect: -94431014742.26852
[2025-04-20 00:34:09] 2025-04-20 04:33:51,450 | INFO     | intersect: -94431014742.26852
[2025-04-20 00:34:09] 2025-04-20 04:33:51,450 | INFO     | chi2: 5.587155442532461
[2025-04-20 00:34:09] 2025-04-20 04:33:51,451 | INFO     | sum of square deviations: 1633506808.373559
[2025-04-20 00:34:09] 2025-04-20 04:33:51,452 | INFO     | sum of deviations: 104183058123.138
[2025-04-20 00:34:09] 2025-04-20 04:33:51,452 | INFO     | mean x: 1745118002.7528737
[2025-04-20 00:34:09] 2025-04-20 04:33:51,452 | INFO     | mean y: 2367002.724137931
[2025-04-20 00:34:09] 2025-04-20 04:33:51,452 | INFO     | -- intersect: -111299116027.86234
[2025-04-20 00:34:09] 2025-04-20 04:33:51,452 | INFO     | intersect: -111299116027.86234
[2025-04-20 00:34:09] 2025-04-20 04:33:51,452 | INFO     | chi2: 4.891765819091056
[2025-04-20 00:34:09] 2025-04-20 04:33:51,452 | INFO     | current chi2=4.891765819091056 (change=12.44621937932355 %)
[2025-04-20 00:34:09] 2025-04-20 04:33:51,452 | INFO     | right removable region: 173
[2025-04-20 00:34:09] 2025-04-20 04:33:51,453 | INFO     | sum of square deviations: 1633479968.373559
[2025-04-20 00:34:09] 2025-04-20 04:33:51,454 | INFO     | sum of deviations: 51487318240.10347
[2025-04-20 00:34:09] 2025-04-20 04:33:51,454 | INFO     | mean x: 1745118307.7528737
[2025-04-20 00:34:09] 2025-04-20 04:33:51,454 | INFO     | mean y: 2405826.793103448
[2025-04-20 00:34:09] 2025-04-20 04:33:51,454 | INFO     | -- intersect: -55003754896.05145
[2025-04-20 00:34:09] 2025-04-20 04:33:51,454 | INFO     | intersect: -55003754896.05145
[2025-04-20 00:34:09] 2025-04-20 04:33:51,454 | INFO     | chi2: 2.8932531107088835
[2025-04-20 00:34:09] 2025-04-20 04:33:51,454 | INFO     | current chi2=2.8932531107088835 (change=48.21599040034094 %)
[2025-04-20 00:34:09] 2025-04-20 04:33:51,455 | INFO     | sum of square deviations: 1496654680.5443733
[2025-04-20 00:34:09] 2025-04-20 04:33:51,456 | INFO     | sum of deviations: 21808805347.51481
[2025-04-20 00:34:09] 2025-04-20 04:33:51,456 | INFO     | mean x: 1745118460.260355
[2025-04-20 00:34:09] 2025-04-20 04:33:51,456 | INFO     | mean y: 2438879.420118343
[2025-04-20 00:34:09] 2025-04-20 04:33:51,456 | INFO     | -- intersect: -25426906515.290287
[2025-04-20 00:34:09] 2025-04-20 04:33:51,456 | INFO     | intersect: -25426906515.290287
[2025-04-20 00:34:09] 2025-04-20 04:33:51,456 | INFO     | chi2: 1.8216435300222127
[2025-04-20 00:34:09] 2025-04-20 04:33:51,456 | INFO     | current chi2=1.8216435300222127 (change=37.03822443740889 %)
[2025-04-20 00:34:09] 2025-04-20 04:33:51,457 | INFO     | sum of square deviations: 1367700313.7256165
[2025-04-20 00:34:09] 2025-04-20 04:33:51,458 | INFO     | sum of deviations: -4515885939.018294
[2025-04-20 00:34:09] 2025-04-20 04:33:51,458 | INFO     | mean x: 1745118612.762195
[2025-04-20 00:34:09] 2025-04-20 04:33:51,458 | INFO     | mean y: 2469991.3841463416
[2025-04-20 00:34:09] 2025-04-20 04:33:51,458 | INFO     | -- intersect: 5764519269.4344845
[2025-04-20 00:34:09] 2025-04-20 04:33:51,458 | INFO     | intersect: 5764519269.4344845
[2025-04-20 00:34:09] 2025-04-20 04:33:51,458 | INFO     | chi2: 0.9204804935214059
[2025-04-20 00:34:09] 2025-04-20 04:33:51,458 | INFO     | current chi2=0.9204804935214059 (change=49.46977944086669 %)
[2025-04-20 00:34:09] 2025-04-20 04:33:51,459 | INFO     | sum of square deviations: 1246373874.905663
[2025-04-20 00:34:09] 2025-04-20 04:33:51,472 | INFO     | sum of deviations: -14400012037.471699
[2025-04-20 00:34:09] 2025-04-20 04:33:51,472 | INFO     | mean x: 1745118765.2641509
[2025-04-20 00:34:09] 2025-04-20 04:33:51,472 | INFO     | mean y: 2482330.320754717
[2025-04-20 00:34:09] 2025-04-20 04:33:51,472 | INFO     | -- intersect: 20164756052.981674
[2025-04-20 00:34:09] 2025-04-20 04:33:51,472 | INFO     | intersect: 20164756052.981674
[2025-04-20 00:34:09] 2025-04-20 04:33:51,473 | INFO     | chi2: 0.7578584909575321
[2025-04-20 00:34:09] 2025-04-20 04:33:51,473 | INFO     | current chi2=0.7578584909575321 (change=17.667077543571217 %)
[2025-04-20 00:34:09] 2025-04-20 04:33:51,473 | INFO     | left removable region: 40
[2025-04-20 00:34:09] 2025-04-20 04:33:51,473 | INFO     | sum of square deviations: 729518669.2330828
[2025-04-20 00:34:09] 2025-04-20 04:33:51,474 | INFO     | sum of deviations: 2066001130.2105262
[2025-04-20 00:34:09] 2025-04-20 04:33:51,474 | INFO     | mean x: 1745119192.225564
[2025-04-20 00:34:09] 2025-04-20 04:33:51,474 | INFO     | mean y: 2485670.5263157897
[2025-04-20 00:34:09] 2025-04-20 04:33:51,474 | INFO     | -- intersect: -4939702069.892096
[2025-04-20 00:34:09] 2025-04-20 04:33:51,474 | INFO     | intersect: -4939702069.892096
[2025-04-20 00:34:09] 2025-04-20 04:33:51,475 | INFO     | chi2: 0.0011584181872417462
[2025-04-20 00:34:09] 2025-04-20 04:33:51,475 | INFO     | -- intersect: -4939702069.892096
[2025-04-20 00:34:09] 2025-04-20 04:33:51,475 | INFO     | current memory leak: 2.83 B/s (using 133 data points, chi2=0.00)
[2025-04-20 00:34:09] 2025-04-20 04:33:51,475 | INFO     | ..............................
[2025-04-20 00:34:09] 2025-04-20 04:33:51,476 | INFO     | . Timing measurements:
[2025-04-20 00:34:09] 2025-04-20 04:33:51,480 | INFO     | . get job = 0 s
[2025-04-20 00:34:09] 2025-04-20 04:33:51,480 | INFO     | . initial setup = 6 s
[2025-04-20 00:34:09] 2025-04-20 04:33:51,480 | INFO     | . payload setup = 41 s
[2025-04-20 00:34:09] 2025-04-20 04:33:51,480 | INFO     | . stage-in = 0 s
[2025-04-20 00:34:09] 2025-04-20 04:33:51,480 | INFO     | . payload execution = 10890 s
[2025-04-20 00:34:09] 2025-04-20 04:33:51,480 | INFO     | . stage-out = 4 s
[2025-04-20 00:34:09] 2025-04-20 04:33:51,480 | INFO     | . log creation = 0 s
[2025-04-20 00:34:09] 2025-04-20 04:33:51,480 | INFO     | ..............................
[2025-04-20 00:34:09] 2025-04-20 04:33:51,820 | INFO     | 
[2025-04-20 00:34:09] 2025-04-20 04:33:51,820 | INFO     | job summary report
[2025-04-20 00:34:09] 2025-04-20 04:33:51,820 | INFO     | --------------------------------------------------
[2025-04-20 00:34:09] 2025-04-20 04:33:51,821 | INFO     | PanDA job id: 6608229774
[2025-04-20 00:34:09] 2025-04-20 04:33:51,821 | INFO     | task id: 44075483
[2025-04-20 00:34:09] 2025-04-20 04:33:51,821 | INFO     | errors: (none)
[2025-04-20 00:34:09] 2025-04-20 04:33:51,821 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-20 00:34:09] 2025-04-20 04:33:51,821 | INFO     | pilot state: finished 
[2025-04-20 00:34:09] 2025-04-20 04:33:51,821 | INFO     | transexitcode: 0
[2025-04-20 00:34:09] 2025-04-20 04:33:51,821 | INFO     | exeerrorcode: 0
[2025-04-20 00:34:09] 2025-04-20 04:33:51,821 | INFO     | exeerrordiag: 
[2025-04-20 00:34:09] 2025-04-20 04:33:51,821 | INFO     | exitcode: 0
[2025-04-20 00:34:09] 2025-04-20 04:33:51,821 | INFO     | exitmsg: OK
[2025-04-20 00:34:09] 2025-04-20 04:33:51,821 | INFO     | cpuconsumptiontime: 41638 s
[2025-04-20 00:34:09] 2025-04-20 04:33:51,821 | INFO     | nevents: 400
[2025-04-20 00:34:09] 2025-04-20 04:33:51,821 | INFO     | neventsw: 0
[2025-04-20 00:34:09] 2025-04-20 04:33:51,821 | INFO     | pid: 1754661
[2025-04-20 00:34:09] 2025-04-20 04:33:51,822 | INFO     | pgrp: 1754661
[2025-04-20 00:34:09] 2025-04-20 04:33:51,822 | INFO     | corecount: 8
[2025-04-20 00:34:09] 2025-04-20 04:33:51,822 | INFO     | event service: False
[2025-04-20 00:34:09] 2025-04-20 04:33:51,822 | INFO     | sizes: {0: 2425993, 1: 2426678, 2: 2426877, 3: 2426877, 13: 2426905, 24: 2426961, 32: 2427323, 36: 2427351, 10937: 2456082, 10942: 2465023, 10946: 2465079, 10973: 
[2025-04-20 00:34:09] 2025-04-20 04:33:51,822 | INFO     | --------------------------------------------------
[2025-04-20 00:34:09] 2025-04-20 04:33:51,822 | INFO     | 
[2025-04-20 00:34:09] 2025-04-20 04:33:51,822 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-20 00:34:09] 2025-04-20 04:33:51,867 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-20 00:34:09] 2025-04-20 04:33:51,868 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-20 00:34:09] 2025-04-20 04:33:51,868 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-20 00:34:09] 2025-04-20 04:33:51,868 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-20 00:34:09] 2025-04-20 04:33:51,868 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-20 00:34:09] 2025-04-20 04:33:51,868 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-20 00:34:09] 2025-04-20 04:33:51,868 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-20 00:34:09] 2025-04-20 04:33:51,868 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-20 00:34:09] 2025-04-20 04:33:51,868 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-20 00:34:09] 2025-04-20 04:33:51,868 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-20 00:34:09] 2025-04-20 04:33:51,868 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-20 00:34:09] 2025-04-20 04:33:51,868 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-20 00:34:09] 2025-04-20 04:33:51,868 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-20 00:34:09] 2025-04-20 04:33:51,868 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-20 00:34:09] 2025-04-20 04:33:51,869 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-20 00:34:09] 2025-04-20 04:33:51,869 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-20 00:34:09] 2025-04-20 04:33:51,869 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-20 00:34:09] 2025-04-20 04:33:51,869 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-20 00:34:09] 2025-04-20 04:33:51,869 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-20 00:34:09] 2025-04-20 04:33:51,869 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-20 00:34:09] 2025-04-20 04:33:51,869 | INFO     | job 6608229774 has completed (purged errors)
[2025-04-20 00:34:09] 2025-04-20 04:33:51,869 | INFO     | overall cleanup function is called
[2025-04-20 00:34:09] 2025-04-20 04:33:52,893 | INFO     | --- collectZombieJob: --- 10, [1754661]
[2025-04-20 00:34:09] 2025-04-20 04:33:52,893 | INFO     | zombie collector waiting for pid 1754661
[2025-04-20 00:34:09] 2025-04-20 04:33:52,893 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-20 00:34:09] 2025-04-20 04:33:52,893 | INFO     | collected zombie processes
[2025-04-20 00:34:09] 2025-04-20 04:33:52,893 | INFO     | will attempt to kill all subprocesses of pid=1754661
[2025-04-20 00:34:09] 2025-04-20 04:33:54,285 | INFO     | process IDs to be killed: [1754661] (in reverse order)
[2025-04-20 00:34:09] 2025-04-20 04:33:54,418 | WARNING  | found no corresponding commands to process id(s)
[2025-04-20 00:34:09] 2025-04-20 04:33:54,418 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-20 00:34:09] 2025-04-20 04:33:54,435 | INFO     | did not find any defunct processes belonging to 1754661
[2025-04-20 00:34:09] 2025-04-20 04:33:54,452 | INFO     | did not find any defunct processes belonging to 1754661
[2025-04-20 00:34:09] 2025-04-20 04:33:54,452 | INFO     | ready for new job
[2025-04-20 00:34:09] 2025-04-20 04:33:54,452 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-20 00:34:09] 2025-04-20 04:33:54,454 | INFO     | **************************************
[2025-04-20 00:34:09] 2025-04-20 04:33:54,454 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-20 00:34:09] 2025-04-20 04:33:54,454 | INFO     | **************************************
[2025-04-20 00:34:09] 2025-04-20 04:33:54,454 | INFO     | 
[2025-04-20 00:34:09] 2025-04-20 04:33:54,476 | INFO     | architecture information:
[2025-04-20 00:34:09] 2025-04-20 04:33:54,477 | INFO     | executing command: cat /etc/os-release
[2025-04-20 00:34:09] 2025-04-20 04:33:54,518 | INFO     | cat /etc/os-release:
[2025-04-20 00:34:09] NAME="CentOS Linux"
[2025-04-20 00:34:09] VERSION="7 (Core)"
[2025-04-20 00:34:09] ID="centos"
[2025-04-20 00:34:09] ID_LIKE="rhel fedora"
[2025-04-20 00:34:09] VERSION_ID="7"
[2025-04-20 00:34:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-20 00:34:09] ANSI_COLOR="0;31"
[2025-04-20 00:34:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-20 00:34:09] HOME_URL="https://www.centos.org/"
[2025-04-20 00:34:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-20 00:34:09] 
[2025-04-20 00:34:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-20 00:34:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-20 00:34:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-20 00:34:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-20 00:34:09] 
[2025-04-20 00:34:09] 2025-04-20 04:33:54,519 | INFO     | **************************************
[2025-04-20 00:34:09] 2025-04-20 04:33:55,022 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-20 00:34:09] 2025-04-20 04:33:55,124 | INFO     | sufficient remaining disk space (73634152448 B)
[2025-04-20 00:34:09] 2025-04-20 04:33:55,125 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-20 00:34:09] 2025-04-20 04:33:55,125 | INFO     | current server update state: UPDATING_FINAL
[2025-04-20 00:34:09] 2025-04-20 04:33:55,125 | INFO     | update_server=False
[2025-04-20 00:34:09] 2025-04-20 04:33:55,125 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-20 00:34:09] 2025-04-20 04:33:55,137 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-20 00:34:09] 2025-04-20 04:33:55,137 | INFO     | aborting loop
[2025-04-20 00:34:09] 2025-04-20 04:33:55,137 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-20 00:34:09] 2025-04-20 04:33:55,138 | INFO     | found 0 job(s) in 20 queues
[2025-04-20 00:34:09] 2025-04-20 04:33:55,138 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-20 00:34:09] 2025-04-20 04:33:55,138 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-20 00:34:09] 2025-04-20 04:33:55,309 | INFO     | all data control threads have been joined
[2025-04-20 00:34:09] 2025-04-20 04:33:55,402 | INFO     | all payload control threads have been joined
[2025-04-20 00:34:09] 2025-04-20 04:33:55,711 | INFO     | all job control threads have been joined
[2025-04-20 00:34:09] 2025-04-20 04:33:56,138 | INFO     | [job] retrieve thread has finished
[2025-04-20 00:34:09] 2025-04-20 04:33:56,153 | INFO     | [job] job monitor thread has finished
[2025-04-20 00:34:09] 2025-04-20 04:33:56,317 | INFO     | [data] control thread has finished
[2025-04-20 00:34:09] 2025-04-20 04:33:56,408 | INFO     | [payload] control thread has finished
[2025-04-20 00:34:09] 2025-04-20 04:33:56,432 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-20 00:34:09] 2025-04-20 04:33:56,540 | INFO     | [payload] validate_post thread has finished
[2025-04-20 00:34:09] 2025-04-20 04:33:56,717 | INFO     | [job] control thread has finished
[2025-04-20 00:34:09] 2025-04-20 04:33:56,935 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-20 00:34:09] 2025-04-20 04:33:56,993 | INFO     | [payload] failed_post thread has finished
[2025-04-20 00:34:09] 2025-04-20 04:33:57,138 | INFO     | [payload] validate_pre thread has finished
[2025-04-20 00:34:09] 2025-04-20 04:33:57,139 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-20 00:34:09] 2025-04-20 04:33:57,521 | INFO     | [payload] execute_payloads thread has finished
[2025-04-20 00:34:09] 2025-04-20 04:33:57,521 | INFO     | [job] validate thread has finished
[2025-04-20 00:34:09] 2025-04-20 04:33:57,522 | INFO     | [job] create_data_payload thread has finished
[2025-04-20 00:34:09] 2025-04-20 04:33:57,527 | INFO     | [data] copytool_in thread has finished
[2025-04-20 00:34:09] 2025-04-20 04:33:57,818 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-20 00:34:09] 2025-04-20 04:33:57,940 | INFO     | [job] queue monitor thread has finished
[2025-04-20 00:34:09] 2025-04-20 04:33:58,460 | INFO     | [data] copytool_out thread has finished
[2025-04-20 00:34:09] 2025-04-20 04:34:01,828 | INFO     | [data] queue_monitor thread has finished
[2025-04-20 00:34:09] 2025-04-20 04:34:03,543 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139783382415168)>', '<ExcThread(monitor, started 139783024125696)>']
[2025-04-20 00:34:09] 2025-04-20 04:34:04,207 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-20 00:34:09] 2025-04-20 04:34:04,207 | INFO     | [monitor] control thread has ended
[2025-04-20 00:34:09] 2025-04-20 04:34:08,569 | INFO     | all workflow threads have been joined
[2025-04-20 00:34:09] 2025-04-20 04:34:08,569 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-20 00:34:09] 2025-04-20 04:34:08,569 | INFO     | traces error code: 0
[2025-04-20 00:34:09] 2025-04-20 04:34:08,570 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-20 00:34:09] 2025-04-20 04:34:09,085 [wrapper] ==== pilot stdout END ====
[2025-04-20 00:34:09] 2025-04-20 04:34:09,102 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-20 00:34:09] 2025-04-20 04:34:09,105 [wrapper] pilotpid: 1740999
[2025-04-20 00:34:09] 2025-04-20 04:34:09,108 [wrapper] Pilot exit status: 0
[2025-04-20 00:34:09] 2025-04-20 04:34:09,191 [wrapper] pandaids: 6608229774
[2025-04-20 00:34:09] 2025-04-20 04:34:09,363 [wrapper] cleanup supervisor_pilot 2520643 1741000
[2025-04-20 00:34:09] 2025-04-20 04:34:09,378 [wrapper] Test setup, not cleaning
[2025-04-20 00:34:09] 2025-04-20 04:34:09,382 [wrapper] apfmon messages muted
[2025-04-20 00:34:09] 2025-04-20 04:34:09,386 [wrapper] ==== wrapper stdout END ====
[2025-04-20 00:34:09] 2025-04-20 04:34:09,389 [wrapper] ==== wrapper stderr END ====
[2025-04-20 00:34:09]  *** Error codes and diagnostics ***
[2025-04-20 00:34:09]     "exeErrorCode": 0,
[2025-04-20 00:34:09]     "exeErrorDiag": "",
[2025-04-20 00:34:09]     "pilotErrorCode": 0,
[2025-04-20 00:34:09]     "pilotErrorDiag": "",
[2025-04-20 00:34:09]  *** Listing of results directory ***
[2025-04-20 00:34:09] total 415160
[2025-04-20 00:34:09] -rw-r--r--. 1 boincer umatlas    495897 Apr 19 18:13 pilot3.tar.gz
[2025-04-20 00:34:09] -rw-r--r--. 1 boincer umatlas      5111 Apr 19 18:15 queuedata.json
[2025-04-20 00:34:09] -rwx------. 1 boincer umatlas     37140 Apr 19 18:16 runpilot2-wrapper.sh
[2025-04-20 00:34:09] -rw-r--r--. 1 boincer umatlas       100 Apr 19 21:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-20 00:34:09] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 19 21:28 run_atlas
[2025-04-20 00:34:09] -rw-r--r--. 1 boincer umatlas       105 Apr 19 21:28 job.xml
[2025-04-20 00:34:09] -rw-r--r--. 2 boincer umatlas 225373939 Apr 19 21:28 EVNT.44075481._003466.pool.root.1
[2025-04-20 00:34:09] -rw-r--r--. 2 boincer umatlas     17569 Apr 19 21:28 start_atlas.sh
[2025-04-20 00:34:09] drwxrwx--x. 2 boincer umatlas      4096 Apr 19 21:28 shared
[2025-04-20 00:34:09] -rw-r--r--. 2 boincer umatlas    508892 Apr 19 21:28 input.tar.gz
[2025-04-20 00:34:09] -rw-r--r--. 1 boincer umatlas         0 Apr 19 21:28 boinc_lockfile
[2025-04-20 00:34:09] -rw-r--r--. 1 boincer umatlas      2577 Apr 19 21:28 pandaJob.out
[2025-04-20 00:34:09] -rw-------. 1 boincer umatlas       467 Apr 19 21:28 setup.sh.local
[2025-04-20 00:34:09] -rw-------. 1 boincer umatlas    991300 Apr 19 21:29 agis_schedconf.cvmfs.json
[2025-04-20 00:34:09] drwx------. 4 boincer umatlas      4096 Apr 19 21:29 pilot3
[2025-04-20 00:34:09] -rw-r--r--. 1 boincer umatlas      6856 Apr 20 00:29 init_data.xml
[2025-04-20 00:34:09] -rw-------. 1 boincer umatlas 193320631 Apr 20 00:32 HITS.44075483._088902.pool.root.1
[2025-04-20 00:34:09] -rw-r--r--. 1 boincer umatlas       531 Apr 20 00:32 boinc_task_state.xml
[2025-04-20 00:34:09] -rw-------. 1 boincer umatlas      1041 Apr 20 00:33 memory_monitor_summary.json
[2025-04-20 00:34:09] -rw-------. 1 boincer umatlas   1618536 Apr 20 00:33 agis_ddmendpoints.agis.ALL.json
[2025-04-20 00:34:09] -rw-------. 1 boincer umatlas    350731 Apr 20 00:33 log.44075483._088902.job.log.tgz.1
[2025-04-20 00:34:09] -rw-------. 1 boincer umatlas        95 Apr 20 00:33 pilot_heartbeat.json
[2025-04-20 00:34:09] -rw-------. 1 boincer umatlas      7725 Apr 20 00:33 heartbeat.json
[2025-04-20 00:34:09] -rw-r--r--. 1 boincer umatlas      8192 Apr 20 00:34 boinc_mmap_file
[2025-04-20 00:34:09] -rw-------. 1 boincer umatlas      4476 Apr 20 00:34 pilotlog.txt
[2025-04-20 00:34:09] -rw-r--r--. 1 boincer umatlas        28 Apr 20 00:34 wrapper_checkpoint.txt
[2025-04-20 00:34:09] -rw-------. 1 boincer umatlas    926526 Apr 20 00:34 log.44075483._088902.job.log.1
[2025-04-20 00:34:09] -rw-------. 1 boincer umatlas       357 Apr 20 00:34 output.list
[2025-04-20 00:34:09] -rw-r--r--. 1 boincer umatlas       620 Apr 20 00:34 runtime_log
[2025-04-20 00:34:09] -rw-------. 1 boincer umatlas   1300480 Apr 20 00:34 result.tar.gz
[2025-04-20 00:34:09] -rw-------. 1 boincer umatlas       655 Apr 20 00:34 vfpNDmYfVQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmR1iLDmiltK8n.diag
[2025-04-20 00:34:09] -rw-r--r--. 1 boincer umatlas     11424 Apr 20 00:34 runtime_log.err
[2025-04-20 00:34:09] -rw-r--r--. 1 boincer umatlas     20890 Apr 20 00:34 stderr.txt
[2025-04-20 00:34:09] HITS file was successfully produced:
[2025-04-20 00:34:09] -rw-------. 1 boincer umatlas 193320631 Apr 20 00:32 shared/HITS.pool.root.1
[2025-04-20 00:34:09]  *** Contents of shared directory: ***
[2025-04-20 00:34:09] total 410684
[2025-04-20 00:34:09] -rw-r--r--. 2 boincer umatlas 225373939 Apr 19 21:28 ATLAS.root_0
[2025-04-20 00:34:09] -rw-r--r--. 2 boincer umatlas     17569 Apr 19 21:28 start_atlas.sh
[2025-04-20 00:34:09] -rw-r--r--. 2 boincer umatlas    508892 Apr 19 21:28 input.tar.gz
[2025-04-20 00:34:09] -rw-------. 1 boincer umatlas 193320631 Apr 20 00:32 HITS.pool.root.1
[2025-04-20 00:34:09] -rw-------. 1 boincer umatlas   1300480 Apr 20 00:34 result.tar.gz
00:34:10 (1736744): run_atlas exited; CPU time 42135.480084
00:34:10 (1736744): called boinc_finish(0)

</stderr_txt>
]]>

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