Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:56:44 (3785431): wrapper (7.7.26015): starting
20:56:44 (3785431): wrapper: running run_atlas (--nthreads 8)
[2025-04-19 20:56:44] Arguments: --nthreads 8
[2025-04-19 20:56:44] Threads: 8
[2025-04-19 20:56:44] Checking for CVMFS
[2025-04-19 20:56:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 20:56:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 20:56:45] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 20:56:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 20:56:46] 2.12.6.0 723137 25136 299908 145056 1 316 16695827 32935936 24041 16776704 0 103127300 99.593 112289916 22495 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-19 20:56:46] CVMFS is ok
[2025-04-19 20:56:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 20:56:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 20:56:46] Further information can be found at the LHC@home message board.
[2025-04-19 20:56:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 20:56:46] Checking for apptainer binary...
[2025-04-19 20:56:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 20:56:46] Running /usr/bin/apptainer --version
[2025-04-19 20:56:46] apptainer version 1.4.0-1.el9
[2025-04-19 20:56:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 20:56:47] c6-6-8-3.aglt2.org
[2025-04-19 20:56:47] apptainer works
[2025-04-19 20:56:47] Set ATHENA_PROC_NUMBER=8
[2025-04-19 20:56:47] Set ATHENA_CORE_NUMBER=8
[2025-04-19 20:56:47] Starting ATLAS job with PandaID=6607985855
[2025-04-19 20:56:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 23:13:51]  *** The last 200 lines of the pilot log: ***
[2025-04-19 23:13:51] 2025-04-20 03:13:27,947 | INFO     | -- intersect: -178075437695.83182
[2025-04-19 23:13:51] 2025-04-20 03:13:27,947 | INFO     | intersect: -178075437695.83182
[2025-04-19 23:13:51] 2025-04-20 03:13:27,948 | INFO     | chi2: 6.0989336363620925
[2025-04-19 23:13:51] 2025-04-20 03:13:27,948 | INFO     | sum of square deviations: 635154087.7165364
[2025-04-19 23:13:51] 2025-04-20 03:13:27,949 | INFO     | sum of deviations: 78085885966.27557
[2025-04-19 23:13:51] 2025-04-20 03:13:27,949 | INFO     | mean x: 1745114615.047244
[2025-04-19 23:13:51] 2025-04-20 03:13:27,949 | INFO     | mean y: 2290089.7874015747
[2025-04-19 23:13:51] 2025-04-20 03:13:27,949 | INFO     | -- intersect: -214542217241.5982
[2025-04-19 23:13:51] 2025-04-20 03:13:27,949 | INFO     | intersect: -214542217241.5982
[2025-04-19 23:13:51] 2025-04-20 03:13:27,949 | INFO     | chi2: 5.274335434826053
[2025-04-19 23:13:51] 2025-04-20 03:13:27,949 | INFO     | current chi2=5.274335434826053 (change=13.520366849374307 %)
[2025-04-19 23:13:51] 2025-04-20 03:13:27,949 | INFO     | right removable region: 126
[2025-04-19 23:13:51] 2025-04-20 03:13:27,950 | INFO     | sum of square deviations: 635157870.6141721
[2025-04-19 23:13:51] 2025-04-20 03:13:27,960 | INFO     | sum of deviations: 38945300940.57477
[2025-04-19 23:13:51] 2025-04-20 03:13:27,961 | INFO     | mean x: 1745114920.055118
[2025-04-19 23:13:51] 2025-04-20 03:13:27,961 | INFO     | mean y: 2346115.346456693
[2025-04-19 23:13:51] 2025-04-20 03:13:27,961 | INFO     | -- intersect: -107001013020.7297
[2025-04-19 23:13:51] 2025-04-20 03:13:27,961 | INFO     | intersect: -107001013020.7297
[2025-04-19 23:13:51] 2025-04-20 03:13:27,961 | INFO     | chi2: 3.114000964882721
[2025-04-19 23:13:51] 2025-04-20 03:13:27,961 | INFO     | current chi2=3.114000964882721 (change=48.941878194625374 %)
[2025-04-19 23:13:51] 2025-04-20 03:13:27,961 | INFO     | sum of square deviations: 563052058.0983618
[2025-04-19 23:13:51] 2025-04-20 03:13:27,962 | INFO     | sum of deviations: 15032313005.90163
[2025-04-19 23:13:51] 2025-04-20 03:13:27,962 | INFO     | mean x: 1745115072.557377
[2025-04-19 23:13:51] 2025-04-20 03:13:27,962 | INFO     | mean y: 2396707.4426229508
[2025-04-19 23:13:51] 2025-04-20 03:13:27,962 | INFO     | -- intersect: -46588527923.218185
[2025-04-19 23:13:51] 2025-04-20 03:13:27,962 | INFO     | intersect: -46588527923.218185
[2025-04-19 23:13:51] 2025-04-20 03:13:27,963 | INFO     | chi2: 1.7634930080222273
[2025-04-19 23:13:51] 2025-04-20 03:13:27,963 | INFO     | current chi2=1.7634930080222273 (change=43.36889975598824 %)
[2025-04-19 23:13:51] 2025-04-20 03:13:27,963 | INFO     | sum of square deviations: 496620770.5811954
[2025-04-19 23:13:51] 2025-04-20 03:13:27,964 | INFO     | sum of deviations: -2829723564.239316
[2025-04-19 23:13:51] 2025-04-20 03:13:27,964 | INFO     | mean x: 1745115225.059829
[2025-04-19 23:13:51] 2025-04-20 03:13:27,964 | INFO     | mean y: 2437400.034188034
[2025-04-19 23:13:51] 2025-04-20 03:13:27,964 | INFO     | -- intersect: 9946028097.792208
[2025-04-19 23:13:51] 2025-04-20 03:13:27,964 | INFO     | intersect: 9946028097.792208
[2025-04-19 23:13:51] 2025-04-20 03:13:27,964 | INFO     | chi2: 0.8653423264874
[2025-04-19 23:13:51] 2025-04-20 03:13:27,982 | INFO     | current chi2=0.8653423264874 (change=50.93020938836107 %)
[2025-04-19 23:13:51] 2025-04-20 03:13:27,983 | INFO     | sum of square deviations: 435631445.5625
[2025-04-19 23:13:51] 2025-04-20 03:13:27,983 | INFO     | sum of deviations: -5443877556.625
[2025-04-19 23:13:51] 2025-04-20 03:13:27,983 | INFO     | mean x: 1745115377.5625
[2025-04-19 23:13:51] 2025-04-20 03:13:27,984 | INFO     | mean y: 2443791.8035714286
[2025-04-19 23:13:51] 2025-04-20 03:13:27,984 | INFO     | -- intersect: 21810314950.79837
[2025-04-19 23:13:51] 2025-04-20 03:13:27,984 | INFO     | intersect: 21810314950.79837
[2025-04-19 23:13:51] 2025-04-20 03:13:27,984 | INFO     | chi2: 0.8283716939355048
[2025-04-19 23:13:51] 2025-04-20 03:13:27,984 | INFO     | current chi2=0.8283716939355048 (change=4.272370762443396 %)
[2025-04-19 23:13:51] 2025-04-20 03:13:27,984 | INFO     | left removable region: 40
[2025-04-19 23:13:51] 2025-04-20 03:13:27,984 | INFO     | sum of square deviations: 197213463.08139488
[2025-04-19 23:13:51] 2025-04-20 03:13:27,985 | INFO     | sum of deviations: 732159299.7906976
[2025-04-19 23:13:51] 2025-04-20 03:13:27,985 | INFO     | mean x: 1745115804.5697675
[2025-04-19 23:13:51] 2025-04-20 03:13:27,985 | INFO     | mean y: 2466804.534883721
[2025-04-19 23:13:51] 2025-04-20 03:13:27,985 | INFO     | -- intersect: -6476313830.23416
[2025-04-19 23:13:51] 2025-04-20 03:13:27,985 | INFO     | intersect: -6476313830.23416
[2025-04-19 23:13:51] 2025-04-20 03:13:27,998 | INFO     | chi2: 0.00010545320187069122
[2025-04-19 23:13:51] 2025-04-20 03:13:27,999 | INFO     | -- intersect: -6476313830.23416
[2025-04-19 23:13:51] 2025-04-20 03:13:27,999 | INFO     | current memory leak: 3.71 B/s (using 86 data points, chi2=0.00)
[2025-04-19 23:13:51] 2025-04-20 03:13:28,021 | INFO     | ..............................
[2025-04-19 23:13:51] 2025-04-20 03:13:28,022 | INFO     | . Timing measurements:
[2025-04-19 23:13:51] 2025-04-20 03:13:28,022 | INFO     | . get job = 0 s
[2025-04-19 23:13:51] 2025-04-20 03:13:28,022 | INFO     | . initial setup = 6 s
[2025-04-19 23:13:51] 2025-04-20 03:13:28,022 | INFO     | . payload setup = 31 s
[2025-04-19 23:13:51] 2025-04-20 03:13:28,022 | INFO     | . stage-in = 0 s
[2025-04-19 23:13:51] 2025-04-20 03:13:28,022 | INFO     | . payload execution = 8025 s
[2025-04-19 23:13:51] 2025-04-20 03:13:28,022 | INFO     | . stage-out = 3 s
[2025-04-19 23:13:51] 2025-04-20 03:13:28,022 | INFO     | . log creation = 0 s
[2025-04-19 23:13:51] 2025-04-20 03:13:28,022 | INFO     | ..............................
[2025-04-19 23:13:51] 2025-04-20 03:13:29,007 | INFO     | 
[2025-04-19 23:13:51] 2025-04-20 03:13:29,008 | INFO     | job summary report
[2025-04-19 23:13:51] 2025-04-20 03:13:29,008 | INFO     | --------------------------------------------------
[2025-04-19 23:13:51] 2025-04-20 03:13:29,008 | INFO     | PanDA job id: 6607985855
[2025-04-19 23:13:51] 2025-04-20 03:13:29,008 | INFO     | task id: 44075483
[2025-04-19 23:13:51] 2025-04-20 03:13:29,008 | INFO     | errors: (none)
[2025-04-19 23:13:51] 2025-04-20 03:13:29,008 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 23:13:51] 2025-04-20 03:13:29,008 | INFO     | pilot state: finished 
[2025-04-19 23:13:51] 2025-04-20 03:13:29,008 | INFO     | transexitcode: 0
[2025-04-19 23:13:51] 2025-04-20 03:13:29,008 | INFO     | exeerrorcode: 0
[2025-04-19 23:13:51] 2025-04-20 03:13:29,008 | INFO     | exeerrordiag: 
[2025-04-19 23:13:51] 2025-04-20 03:13:29,008 | INFO     | exitcode: 0
[2025-04-19 23:13:51] 2025-04-20 03:13:29,008 | INFO     | exitmsg: OK
[2025-04-19 23:13:51] 2025-04-20 03:13:29,009 | INFO     | cpuconsumptiontime: 42156 s
[2025-04-19 23:13:51] 2025-04-20 03:13:29,009 | INFO     | nevents: 400
[2025-04-19 23:13:51] 2025-04-20 03:13:29,009 | INFO     | neventsw: 0
[2025-04-19 23:13:51] 2025-04-20 03:13:29,009 | INFO     | pid: 3804920
[2025-04-19 23:13:51] 2025-04-20 03:13:29,009 | INFO     | pgrp: 3804920
[2025-04-19 23:13:51] 2025-04-20 03:13:29,009 | INFO     | corecount: 8
[2025-04-19 23:13:51] 2025-04-20 03:13:29,009 | INFO     | event service: False
[2025-04-19 23:13:51] 2025-04-20 03:13:29,009 | INFO     | sizes: {0: 2425945, 1: 2426801, 2: 2426829, 12: 2426829, 23: 2426857, 25: 2427091, 34: 2427247, 8062: 2454868, 8067: 2463809, 8070: 2463865, 8094: 2464035}
[2025-04-19 23:13:51] 2025-04-20 03:13:29,009 | INFO     | --------------------------------------------------
[2025-04-19 23:13:51] 2025-04-20 03:13:29,009 | INFO     | 
[2025-04-19 23:13:51] 2025-04-20 03:13:29,009 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-04-19 23:13:51] 2025-04-20 03:13:29,113 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 23:13:51] 2025-04-20 03:13:29,113 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 23:13:51] 2025-04-20 03:13:29,113 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 23:13:51] 2025-04-20 03:13:29,113 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 23:13:51] 2025-04-20 03:13:29,113 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 23:13:51] 2025-04-20 03:13:29,114 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 23:13:51] 2025-04-20 03:13:29,114 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 23:13:51] 2025-04-20 03:13:29,114 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 23:13:51] 2025-04-20 03:13:29,114 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 23:13:51] 2025-04-20 03:13:29,114 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 23:13:51] 2025-04-20 03:13:29,114 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 23:13:51] 2025-04-20 03:13:29,114 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 23:13:51] 2025-04-20 03:13:29,114 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 23:13:51] 2025-04-20 03:13:29,114 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 23:13:51] 2025-04-20 03:13:29,114 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 23:13:51] 2025-04-20 03:13:29,114 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 23:13:51] 2025-04-20 03:13:29,114 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 23:13:51] 2025-04-20 03:13:29,114 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 23:13:51] 2025-04-20 03:13:29,115 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 23:13:51] 2025-04-20 03:13:29,115 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 23:13:51] 2025-04-20 03:13:29,115 | INFO     | job 6607985855 has completed (purged errors)
[2025-04-19 23:13:51] 2025-04-20 03:13:29,115 | INFO     | overall cleanup function is called
[2025-04-19 23:13:51] 2025-04-20 03:13:30,167 | INFO     | --- collectZombieJob: --- 10, [3804920]
[2025-04-19 23:13:51] 2025-04-20 03:13:30,168 | INFO     | zombie collector waiting for pid 3804920
[2025-04-19 23:13:51] 2025-04-20 03:13:30,168 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 23:13:51] 2025-04-20 03:13:30,168 | INFO     | collected zombie processes
[2025-04-19 23:13:51] 2025-04-20 03:13:30,168 | INFO     | will attempt to kill all subprocesses of pid=3804920
[2025-04-19 23:13:51] 2025-04-20 03:13:32,954 | INFO     | process IDs to be killed: [3804920] (in reverse order)
[2025-04-19 23:13:51] 2025-04-20 03:13:33,396 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 23:13:51] 2025-04-20 03:13:33,396 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 23:13:51] 2025-04-20 03:13:33,472 | INFO     | did not find any defunct processes belonging to 3804920
[2025-04-19 23:13:51] 2025-04-20 03:13:33,583 | INFO     | did not find any defunct processes belonging to 3804920
[2025-04-19 23:13:51] 2025-04-20 03:13:33,584 | INFO     | ready for new job
[2025-04-19 23:13:51] 2025-04-20 03:13:33,584 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 23:13:51] 2025-04-20 03:13:33,585 | INFO     | **************************************
[2025-04-19 23:13:51] 2025-04-20 03:13:33,585 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 23:13:51] 2025-04-20 03:13:33,585 | INFO     | **************************************
[2025-04-19 23:13:51] 2025-04-20 03:13:33,585 | INFO     | 
[2025-04-19 23:13:51] 2025-04-20 03:13:33,621 | INFO     | architecture information:
[2025-04-19 23:13:51] 2025-04-20 03:13:33,644 | INFO     | executing command: cat /etc/os-release
[2025-04-19 23:13:51] 2025-04-20 03:13:33,770 | INFO     | cat /etc/os-release:
[2025-04-19 23:13:51] NAME="CentOS Linux"
[2025-04-19 23:13:51] VERSION="7 (Core)"
[2025-04-19 23:13:51] ID="centos"
[2025-04-19 23:13:51] ID_LIKE="rhel fedora"
[2025-04-19 23:13:51] VERSION_ID="7"
[2025-04-19 23:13:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 23:13:51] ANSI_COLOR="0;31"
[2025-04-19 23:13:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 23:13:51] HOME_URL="https://www.centos.org/"
[2025-04-19 23:13:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 23:13:51] 
[2025-04-19 23:13:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 23:13:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 23:13:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 23:13:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 23:13:51] 
[2025-04-19 23:13:51] 2025-04-20 03:13:33,770 | INFO     | **************************************
[2025-04-19 23:13:51] 2025-04-20 03:13:34,274 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-04-19 23:13:51] 2025-04-20 03:13:34,488 | INFO     | sufficient remaining disk space (93558145024 B)
[2025-04-19 23:13:51] 2025-04-20 03:13:34,488 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 23:13:51] 2025-04-20 03:13:34,488 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 23:13:51] 2025-04-20 03:13:34,488 | INFO     | update_server=False
[2025-04-19 23:13:51] 2025-04-20 03:13:34,489 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 23:13:51] 2025-04-20 03:13:34,494 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 23:13:51] 2025-04-20 03:13:34,853 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-19 23:13:51] 2025-04-20 03:13:34,854 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-19 23:13:51] 2025-04-20 03:13:34,854 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 23:13:51] 2025-04-20 03:13:34,854 | INFO     | will abort loop
[2025-04-19 23:13:51] 2025-04-20 03:13:35,017 | INFO     | all data control threads have been joined
[2025-04-19 23:13:51] 2025-04-20 03:13:35,540 | INFO     | [job] retrieve thread has finished
[2025-04-19 23:13:51] 2025-04-20 03:13:35,540 | INFO     | [job] queue monitor thread has finished
[2025-04-19 23:13:51] 2025-04-20 03:13:35,548 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 23:13:51] 2025-04-20 03:13:35,806 | INFO     | [data] copytool_in thread has finished
[2025-04-19 23:13:51] 2025-04-20 03:13:35,814 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 23:13:51] 2025-04-20 03:13:35,814 | INFO     | [job] validate thread has finished
[2025-04-19 23:13:51] 2025-04-20 03:13:35,820 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 23:13:51] 2025-04-20 03:13:35,899 | INFO     | all payload control threads have been joined
[2025-04-19 23:13:51] 2025-04-20 03:13:35,900 | INFO     | [payload] failed_post thread has finished
[2025-04-19 23:13:51] 2025-04-20 03:13:35,900 | INFO     | [payload] validate_post thread has finished
[2025-04-19 23:13:51] 2025-04-20 03:13:35,901 | INFO     | [job] job monitor thread has finished
[2025-04-19 23:13:51] 2025-04-20 03:13:36,023 | INFO     | [data] control thread has finished
[2025-04-19 23:13:51] 2025-04-20 03:13:36,475 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 23:13:51] 2025-04-20 03:13:36,558 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 23:13:51] 2025-04-20 03:13:36,721 | INFO     | all job control threads have been joined
[2025-04-19 23:13:51] 2025-04-20 03:13:36,948 | INFO     | [payload] control thread has finished
[2025-04-19 23:13:51] 2025-04-20 03:13:37,577 | INFO     | [data] copytool_out thread has finished
[2025-04-19 23:13:51] 2025-04-20 03:13:37,727 | INFO     | [job] control thread has finished
[2025-04-19 23:13:51] 2025-04-20 03:13:37,792 | INFO     | PID=3795811 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-19 23:13:51] 2025-04-20 03:13:37,793 | INFO     | .. there are 32 such processes running
[2025-04-19 23:13:51] 2025-04-20 03:13:37,793 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 23:13:51] 2025-04-20 03:13:37,793 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 23:13:51] 2025-04-20 03:13:37,793 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 23:13:51] 2025-04-20 03:13:38,008 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 23:13:51] 2025-04-20 03:13:42,029 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 23:13:51] 2025-04-20 03:13:44,174 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140023135405888)>', '<ExcThread(monitor, started 140022502123264)>']
[2025-04-19 23:13:51] 2025-04-20 03:13:44,834 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 23:13:51] 2025-04-20 03:13:44,835 | INFO     | [monitor] control thread has ended
[2025-04-19 23:13:51] 2025-04-20 03:13:49,204 | INFO     | all workflow threads have been joined
[2025-04-19 23:13:51] 2025-04-20 03:13:49,205 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 23:13:51] 2025-04-20 03:13:49,205 | INFO     | traces error code: 0
[2025-04-19 23:13:51] 2025-04-20 03:13:49,205 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 23:13:51] 2025-04-20 03:13:50,949 [wrapper] ==== pilot stdout END ====
[2025-04-19 23:13:51] 2025-04-20 03:13:50,964 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 23:13:51] 2025-04-20 03:13:50,994 [wrapper] pilotpid: 3795811
[2025-04-19 23:13:51] 2025-04-20 03:13:51,012 [wrapper] Pilot exit status: 0
[2025-04-19 23:13:51] 2025-04-20 03:13:51,111 [wrapper] pandaids: 6607985855
[2025-04-19 23:13:51] 2025-04-20 03:13:51,241 [wrapper] cleanup supervisor_pilot  265216 3795812
[2025-04-19 23:13:51] 2025-04-20 03:13:51,251 [wrapper] Test setup, not cleaning
[2025-04-19 23:13:51] 2025-04-20 03:13:51,285 [wrapper] apfmon messages muted
[2025-04-19 23:13:51] 2025-04-20 03:13:51,307 [wrapper] ==== wrapper stdout END ====
[2025-04-19 23:13:51] 2025-04-20 03:13:51,369 [wrapper] ==== wrapper stderr END ====
[2025-04-19 23:13:51]  *** Error codes and diagnostics ***
[2025-04-19 23:13:51]     "exeErrorCode": 0,
[2025-04-19 23:13:51]     "exeErrorDiag": "",
[2025-04-19 23:13:51]     "pilotErrorCode": 0,
[2025-04-19 23:13:51]     "pilotErrorDiag": "",
[2025-04-19 23:13:51]  *** Listing of results directory ***
[2025-04-19 23:13:51] total 414520
[2025-04-19 23:13:51] -rw-r--r--. 1 boincer umatlas    495897 Apr 19 13:08 pilot3.tar.gz
[2025-04-19 23:13:51] -rw-r--r--. 1 boincer umatlas      5111 Apr 19 13:18 queuedata.json
[2025-04-19 23:13:51] -rwx------. 1 boincer umatlas     37140 Apr 19 13:19 runpilot2-wrapper.sh
[2025-04-19 23:13:51] -rw-r--r--. 1 boincer umatlas       100 Apr 19 20:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 23:13:51] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 19 20:56 run_atlas
[2025-04-19 23:13:51] -rw-r--r--. 1 boincer umatlas       105 Apr 19 20:56 job.xml
[2025-04-19 23:13:51] -rw-r--r--. 2 boincer umatlas 222141640 Apr 19 20:56 EVNT.44075481._003334.pool.root.1
[2025-04-19 23:13:51] -rw-r--r--. 2 boincer umatlas     17569 Apr 19 20:56 start_atlas.sh
[2025-04-19 23:13:51] drwxrwx--x. 2 boincer umatlas      4096 Apr 19 20:56 shared
[2025-04-19 23:13:51] -rw-r--r--. 2 boincer umatlas    508886 Apr 19 20:56 input.tar.gz
[2025-04-19 23:13:51] -rw-r--r--. 1 boincer umatlas         0 Apr 19 20:56 boinc_lockfile
[2025-04-19 23:13:51] -rw-r--r--. 1 boincer umatlas      2578 Apr 19 20:56 pandaJob.out
[2025-04-19 23:13:51] -rw-------. 1 boincer umatlas       467 Apr 19 20:56 setup.sh.local
[2025-04-19 23:13:51] -rw-------. 1 boincer umatlas    991300 Apr 19 20:57 agis_schedconf.cvmfs.json
[2025-04-19 23:13:51] -rw-------. 1 boincer umatlas   1618536 Apr 19 20:57 agis_ddmendpoints.agis.ALL.json
[2025-04-19 23:13:51] drwx------. 4 boincer umatlas      4096 Apr 19 20:57 pilot3
[2025-04-19 23:13:51] -rw-r--r--. 1 boincer umatlas      6856 Apr 19 23:11 init_data.xml
[2025-04-19 23:13:51] -rw-------. 1 boincer umatlas 196330502 Apr 19 23:12 HITS.44075483._086005.pool.root.1
[2025-04-19 23:13:51] -rw-r--r--. 1 boincer umatlas       530 Apr 19 23:12 boinc_task_state.xml
[2025-04-19 23:13:51] -rw-------. 1 boincer umatlas      1052 Apr 19 23:12 memory_monitor_summary.json
[2025-04-19 23:13:51] -rw-------. 1 boincer umatlas        95 Apr 19 23:12 pilot_heartbeat.json
[2025-04-19 23:13:51] -rw-------. 1 boincer umatlas    332274 Apr 19 23:13 log.44075483._086005.job.log.tgz.1
[2025-04-19 23:13:51] -rw-------. 1 boincer umatlas      7737 Apr 19 23:13 heartbeat.json
[2025-04-19 23:13:51] -rw-r--r--. 1 boincer umatlas        27 Apr 19 23:13 wrapper_checkpoint.txt
[2025-04-19 23:13:51] -rw-------. 1 boincer umatlas      4934 Apr 19 23:13 pilotlog.txt
[2025-04-19 23:13:51] -rw-------. 1 boincer umatlas    729795 Apr 19 23:13 log.44075483._086005.job.log.1
[2025-04-19 23:13:51] -rw-------. 1 boincer umatlas       357 Apr 19 23:13 output.list
[2025-04-19 23:13:51] -rw-r--r--. 1 boincer umatlas       620 Apr 19 23:13 runtime_log
[2025-04-19 23:13:51] -rw-------. 1 boincer umatlas   1085440 Apr 19 23:13 result.tar.gz
[2025-04-19 23:13:51] -rw-r--r--. 1 boincer umatlas      8192 Apr 19 23:13 boinc_mmap_file
[2025-04-19 23:13:51] -rw-r--r--. 1 boincer umatlas     11418 Apr 19 23:13 runtime_log.err
[2025-04-19 23:13:51] -rw-------. 1 boincer umatlas       655 Apr 19 23:13 mrGLDmB2QQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmzUiLDmirlVSo.diag
[2025-04-19 23:13:51] -rw-r--r--. 1 boincer umatlas     20695 Apr 19 23:13 stderr.txt
[2025-04-19 23:14:12] HITS file was successfully produced:
[2025-04-19 23:14:12] -rw-------. 1 boincer umatlas 196330502 Apr 19 23:12 shared/HITS.pool.root.1
[2025-04-19 23:14:12]  *** Contents of shared directory: ***
[2025-04-19 23:14:12] total 410252
[2025-04-19 23:14:12] -rw-r--r--. 2 boincer umatlas 222141640 Apr 19 20:56 ATLAS.root_0
[2025-04-19 23:14:12] -rw-r--r--. 2 boincer umatlas     17569 Apr 19 20:56 start_atlas.sh
[2025-04-19 23:14:12] -rw-r--r--. 2 boincer umatlas    508886 Apr 19 20:56 input.tar.gz
[2025-04-19 23:14:12] -rw-------. 1 boincer umatlas 196330502 Apr 19 23:12 HITS.pool.root.1
[2025-04-19 23:14:12] -rw-------. 1 boincer umatlas   1085440 Apr 19 23:13 result.tar.gz
23:14:13 (3785431): run_atlas exited; CPU time 42533.757312
23:14:13 (3785431): called boinc_finish(0)

</stderr_txt>
]]>

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