Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
15:51:18 (215369): wrapper (7.7.26015): starting
15:51:18 (215369): wrapper: running run_atlas (--nthreads 5)
[2025-04-20 15:51:18] Arguments: --nthreads 5
[2025-04-20 15:51:18] Threads: 5
[2025-04-20 15:51:18] Checking for CVMFS
[2025-04-20 15:51:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-20 15:51:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-20 15:51:18] Running cvmfs_config stat atlas.cern.ch
[2025-04-20 15:51:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-20 15:51:18] 2.12.7.0 3367 547 47484 145064 3 56 3502124 4096000 0 130560 3 527692 99.989 363593 1272 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-04-20 15:51:18] CVMFS is ok
[2025-04-20 15:51:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-20 15:51:19] Small home clusters do not require a local http proxy but it is suggested if
[2025-04-20 15:51:19] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-04-20 15:51:19] Further information can be found at the LHC@home message board.
[2025-04-20 15:51:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-20 15:51:19] Checking for apptainer binary...
[2025-04-20 15:51:19] apptainer is not installed, using version from CVMFS
[2025-04-20 15:51:19] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-20 15:51:19] BoincUbuntu
[2025-04-20 15:51:19] apptainer works
[2025-04-20 15:51:19] Set ATHENA_PROC_NUMBER=5
[2025-04-20 15:51:19] Set ATHENA_CORE_NUMBER=5
[2025-04-20 15:51:19] Starting ATLAS job with PandaID=6608145852
[2025-04-20 15:51:19] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-20 17:36:03]  *** The last 200 lines of the pilot log: ***
[2025-04-20 17:36:03]  protocol_id=None
[2025-04-20 17:36:03]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-20 17:36:03]  replicas=None
[2025-04-20 17:36:03]  scope=mc23_13p6TeV
[2025-04-20 17:36:03]  status=None
[2025-04-20 17:36:03]  status_code=0
[2025-04-20 17:36:03]  storage_token=
[2025-04-20 17:36:03]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6608145852/log.44075483._088209.job.log.tgz.1
[2025-04-20 17:36:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2d/d5/log.44075483._088209.job.log.tgz.1
[2025-04-20 17:36:03]  workdir=None
[2025-04-20 17:36:03] ]
[2025-04-20 17:36:03] 2025-04-20 07:35:31,656 | INFO     | transferring file log.44075483._088209.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6608145852/log.44075483._088209.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-04-20 17:36:03] 2025-04-20 07:35:31,657 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6608145852/log.44075483._088209.job.log.tgz.1 /var/lib/boinc/slots/0/log.44075483._088209.job
[2025-04-20 17:36:03] 2025-04-20 07:35:31,692 | INFO     | adding to output.list: log.44075483._088209.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2d/d5/log.44075483._088209.job.log.tg
[2025-04-20 17:36:03] 2025-04-20 07:35:31,692 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-20 17:36:03] 2025-04-20 07:35:31,693 | INFO     | summary of transferred files:
[2025-04-20 17:36:03] 2025-04-20 07:35:31,693 | INFO     |  -- lfn=log.44075483._088209.job.log.tgz.1, status_code=0, status=transferred
[2025-04-20 17:36:03] 2025-04-20 07:35:31,693 | INFO     | stage-out finished correctly
[2025-04-20 17:36:03] 2025-04-20 07:35:32,611 | INFO     | PID=219003 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-04-20 17:36:03] 2025-04-20 07:35:33,314 | INFO     | monitor loop #130: job 0:6608145852 is in state 'finished'
[2025-04-20 17:36:03] 2025-04-20 07:35:33,315 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 17:36:03] 2025-04-20 07:35:34,045 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-20 17:36:03] 2025-04-20 07:35:35,383 | INFO     | job 6608145852 has state=finished
[2025-04-20 17:36:03] 2025-04-20 07:35:35,383 | INFO     | preparing for final server update for job 6608145852 in state='finished'
[2025-04-20 17:36:03] 2025-04-20 07:35:35,384 | INFO     | this job has now completed (state=finished)
[2025-04-20 17:36:03] 2025-04-20 07:35:35,384 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-20 17:36:03] 2025-04-20 07:35:35,384 | INFO     | log transfer has been attempted: DONE
[2025-04-20 17:36:03] 2025-04-20 07:35:35,384 | INFO     | job 6608145852 has finished - writing final server update
[2025-04-20 17:36:03] 2025-04-20 07:35:35,384 | INFO     | total number of processed events: 400 (read)
[2025-04-20 17:36:03] 2025-04-20 07:35:35,395 | INFO     | executing command: lscpu
[2025-04-20 17:36:03] 2025-04-20 07:35:35,443 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-20 17:36:03] 2025-04-20 07:35:35,818 | INFO     | monitor loop #131: job 0:6608145852 is in state 'finished'
[2025-04-20 17:36:03] 2025-04-20 07:35:35,819 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 17:36:03] 2025-04-20 07:35:37,619 | INFO     | 6241s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-04-20 17:36:03] 2025-04-20 07:35:38,322 | INFO     | monitor loop #132: job 0:6608145852 is in state 'finished'
[2025-04-20 17:36:03] 2025-04-20 07:35:38,322 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 17:36:03] 2025-04-20 07:35:40,825 | INFO     | monitor loop #133: job 0:6608145852 is in state 'finished'
[2025-04-20 17:36:03] 2025-04-20 07:35:40,825 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 17:36:03] 2025-04-20 07:35:43,033 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-20 17:36:03] 2025-04-20 07:35:43,033 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6608145852/memory_monitor_summary.json (trf name=prmon)
[2025-04-20 17:36:03] 2025-04-20 07:35:43,034 | INFO     | extracted standard info from prmon json
[2025-04-20 17:36:03] 2025-04-20 07:35:43,034 | INFO     | extracted standard memory fields from prmon json
[2025-04-20 17:36:03] 2025-04-20 07:35:43,034 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-20 17:36:03] 2025-04-20 07:35:43,034 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-20 17:36:03] 2025-04-20 07:35:43,034 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-20 17:36:03] 2025-04-20 07:35:43,035 | INFO     | fitting pss+swap vs Time
[2025-04-20 17:36:03] 2025-04-20 07:35:43,035 | INFO     | sum of square deviations: 215322338.4705882
[2025-04-20 17:36:03] 2025-04-20 07:35:43,036 | INFO     | sum of deviations: 24266318800.470585
[2025-04-20 17:36:03] 2025-04-20 07:35:43,036 | INFO     | mean x: 1745131311.4117646
[2025-04-20 17:36:03] 2025-04-20 07:35:43,036 | INFO     | mean y: 2270947.911764706
[2025-04-20 17:36:03] 2025-04-20 07:35:43,036 | INFO     | -- intersect: -196669904601.5177
[2025-04-20 17:36:03] 2025-04-20 07:35:43,036 | INFO     | intersect: -196669904601.5177
[2025-04-20 17:36:03] 2025-04-20 07:35:43,036 | INFO     | chi2: 1.433263987286468
[2025-04-20 17:36:03] 2025-04-20 07:35:43,036 | INFO     | -- intersect: -196669904601.5177
[2025-04-20 17:36:03] 2025-04-20 07:35:43,036 | INFO     | current memory leak: 112.70 B/s (using 68 data points, chi2=1.43)
[2025-04-20 17:36:03] 2025-04-20 07:35:43,036 | INFO     | ..............................
[2025-04-20 17:36:03] 2025-04-20 07:35:43,037 | INFO     | . Timing measurements:
[2025-04-20 17:36:03] 2025-04-20 07:35:43,037 | INFO     | . get job = 0 s
[2025-04-20 17:36:03] 2025-04-20 07:35:43,037 | INFO     | . initial setup = 7 s
[2025-04-20 17:36:03] 2025-04-20 07:35:43,037 | INFO     | . payload setup = 13 s
[2025-04-20 17:36:03] 2025-04-20 07:35:43,037 | INFO     | . stage-in = 0 s
[2025-04-20 17:36:03] 2025-04-20 07:35:43,037 | INFO     | . payload execution = 6189 s
[2025-04-20 17:36:03] 2025-04-20 07:35:43,037 | INFO     | . stage-out = 0 s
[2025-04-20 17:36:03] 2025-04-20 07:35:43,037 | INFO     | . log creation = 0 s
[2025-04-20 17:36:03] 2025-04-20 07:35:43,037 | INFO     | ..............................
[2025-04-20 17:36:03] 2025-04-20 07:35:43,099 | INFO     | 
[2025-04-20 17:36:03] 2025-04-20 07:35:43,100 | INFO     | job summary report
[2025-04-20 17:36:03] 2025-04-20 07:35:43,100 | INFO     | --------------------------------------------------
[2025-04-20 17:36:03] 2025-04-20 07:35:43,100 | INFO     | PanDA job id: 6608145852
[2025-04-20 17:36:03] 2025-04-20 07:35:43,100 | INFO     | task id: 44075483
[2025-04-20 17:36:03] 2025-04-20 07:35:43,100 | INFO     | errors: (none)
[2025-04-20 17:36:03] 2025-04-20 07:35:43,100 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-20 17:36:03] 2025-04-20 07:35:43,100 | INFO     | pilot state: finished 
[2025-04-20 17:36:03] 2025-04-20 07:35:43,100 | INFO     | transexitcode: 0
[2025-04-20 17:36:03] 2025-04-20 07:35:43,100 | INFO     | exeerrorcode: 0
[2025-04-20 17:36:03] 2025-04-20 07:35:43,101 | INFO     | exeerrordiag: 
[2025-04-20 17:36:03] 2025-04-20 07:35:43,101 | INFO     | exitcode: 0
[2025-04-20 17:36:03] 2025-04-20 07:35:43,101 | INFO     | exitmsg: OK
[2025-04-20 17:36:03] 2025-04-20 07:35:43,101 | INFO     | cpuconsumptiontime: 25803 s
[2025-04-20 17:36:03] 2025-04-20 07:35:43,101 | INFO     | nevents: 400
[2025-04-20 17:36:03] 2025-04-20 07:35:43,101 | INFO     | neventsw: 0
[2025-04-20 17:36:03] 2025-04-20 07:35:43,101 | INFO     | pid: 225414
[2025-04-20 17:36:03] 2025-04-20 07:35:43,101 | INFO     | pgrp: 225414
[2025-04-20 17:36:03] 2025-04-20 07:35:43,101 | INFO     | corecount: 5
[2025-04-20 17:36:03] 2025-04-20 07:35:43,101 | INFO     | event service: False
[2025-04-20 17:36:03] 2025-04-20 07:35:43,101 | INFO     | sizes: {0: 2426849, 1: 2426849, 9: 2427083, 11: 2427111, 6207: 2452435, 6208: 2461376, 6210: 2461560, 6219: 2461730}
[2025-04-20 17:36:03] 2025-04-20 07:35:43,102 | INFO     | --------------------------------------------------
[2025-04-20 17:36:03] 2025-04-20 07:35:43,102 | INFO     | 
[2025-04-20 17:36:03] 2025-04-20 07:35:43,102 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-04-20 17:36:03] 2025-04-20 07:35:43,151 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-20 17:36:03] 2025-04-20 07:35:43,151 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-20 17:36:03] 2025-04-20 07:35:43,151 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-20 17:36:03] 2025-04-20 07:35:43,152 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-20 17:36:03] 2025-04-20 07:35:43,152 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-20 17:36:03] 2025-04-20 07:35:43,152 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-20 17:36:03] 2025-04-20 07:35:43,152 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-20 17:36:03] 2025-04-20 07:35:43,152 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-20 17:36:03] 2025-04-20 07:35:43,152 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-20 17:36:03] 2025-04-20 07:35:43,152 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-20 17:36:03] 2025-04-20 07:35:43,152 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-20 17:36:03] 2025-04-20 07:35:43,152 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-20 17:36:03] 2025-04-20 07:35:43,153 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-20 17:36:03] 2025-04-20 07:35:43,153 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-20 17:36:03] 2025-04-20 07:35:43,153 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-20 17:36:03] 2025-04-20 07:35:43,153 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-20 17:36:03] 2025-04-20 07:35:43,153 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-20 17:36:03] 2025-04-20 07:35:43,153 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-20 17:36:03] 2025-04-20 07:35:43,153 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-20 17:36:03] 2025-04-20 07:35:43,153 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-20 17:36:03] 2025-04-20 07:35:43,154 | INFO     | job 6608145852 has completed (purged errors)
[2025-04-20 17:36:03] 2025-04-20 07:35:43,154 | INFO     | overall cleanup function is called
[2025-04-20 17:36:03] 2025-04-20 07:35:44,162 | INFO     | --- collectZombieJob: --- 10, [225414]
[2025-04-20 17:36:03] 2025-04-20 07:35:44,163 | INFO     | zombie collector waiting for pid 225414
[2025-04-20 17:36:03] 2025-04-20 07:35:44,163 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-20 17:36:03] 2025-04-20 07:35:44,163 | INFO     | collected zombie processes
[2025-04-20 17:36:03] 2025-04-20 07:35:44,163 | INFO     | will attempt to kill all subprocesses of pid=225414
[2025-04-20 17:36:03] 2025-04-20 07:35:44,218 | INFO     | process IDs to be killed: [225414] (in reverse order)
[2025-04-20 17:36:03] 2025-04-20 07:35:44,336 | WARNING  | found no corresponding commands to process id(s)
[2025-04-20 17:36:03] 2025-04-20 07:35:44,336 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-20 17:36:03] 2025-04-20 07:35:44,337 | INFO     | did not find any defunct processes belonging to 225414
[2025-04-20 17:36:03] 2025-04-20 07:35:44,338 | INFO     | did not find any defunct processes belonging to 225414
[2025-04-20 17:36:03] 2025-04-20 07:35:44,338 | INFO     | ready for new job
[2025-04-20 17:36:03] 2025-04-20 07:35:44,338 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-20 17:36:03] 2025-04-20 07:35:44,339 | INFO     | **************************************
[2025-04-20 17:36:03] 2025-04-20 07:35:44,339 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-20 17:36:03] 2025-04-20 07:35:44,339 | INFO     | **************************************
[2025-04-20 17:36:03] 2025-04-20 07:35:44,340 | INFO     | 
[2025-04-20 17:36:03] 2025-04-20 07:35:44,340 | INFO     | pilot is running in a VM
[2025-04-20 17:36:03] 2025-04-20 07:35:44,340 | INFO     | architecture information:
[2025-04-20 17:36:03] 2025-04-20 07:35:44,342 | INFO     | executing command: cat /etc/os-release
[2025-04-20 17:36:03] 2025-04-20 07:35:44,372 | INFO     | cat /etc/os-release:
[2025-04-20 17:36:03] NAME="CentOS Linux"
[2025-04-20 17:36:03] VERSION="7 (Core)"
[2025-04-20 17:36:03] ID="centos"
[2025-04-20 17:36:03] ID_LIKE="rhel fedora"
[2025-04-20 17:36:03] VERSION_ID="7"
[2025-04-20 17:36:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-20 17:36:03] ANSI_COLOR="0;31"
[2025-04-20 17:36:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-20 17:36:03] HOME_URL="https://www.centos.org/"
[2025-04-20 17:36:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-20 17:36:03] 
[2025-04-20 17:36:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-20 17:36:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-20 17:36:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-20 17:36:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-20 17:36:03] 
[2025-04-20 17:36:03] 2025-04-20 07:35:44,373 | INFO     | **************************************
[2025-04-20 17:36:03] 2025-04-20 07:35:44,876 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-04-20 17:36:03] 2025-04-20 07:35:44,907 | INFO     | sufficient remaining disk space (90945093632 B)
[2025-04-20 17:36:03] 2025-04-20 07:35:44,908 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-20 17:36:03] 2025-04-20 07:35:44,908 | INFO     | current server update state: UPDATING_FINAL
[2025-04-20 17:36:03] 2025-04-20 07:35:44,908 | INFO     | update_server=False
[2025-04-20 17:36:03] 2025-04-20 07:35:44,908 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-20 17:36:03] 2025-04-20 07:35:44,909 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-20 17:36:03] 2025-04-20 07:35:44,909 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-20 17:36:03] 2025-04-20 07:35:44,910 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-20 17:36:03] 2025-04-20 07:35:44,910 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-20 17:36:03] 2025-04-20 07:35:44,911 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-20 17:36:03] 2025-04-20 07:35:44,911 | INFO     | aborting loop
[2025-04-20 17:36:03] 2025-04-20 07:35:44,912 | INFO     | found 0 job(s) in 20 queues
[2025-04-20 17:36:03] 2025-04-20 07:35:44,912 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-20 17:36:03] 2025-04-20 07:35:44,912 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-20 17:36:03] 2025-04-20 07:35:45,776 | INFO     | all data control threads have been joined
[2025-04-20 17:36:03] 2025-04-20 07:35:45,915 | INFO     | [job] retrieve thread has finished
[2025-04-20 17:36:03] 2025-04-20 07:35:45,918 | INFO     | [job] queue monitor thread has finished
[2025-04-20 17:36:03] 2025-04-20 07:35:45,919 | INFO     | [job] job monitor thread has finished
[2025-04-20 17:36:03] 2025-04-20 07:35:46,113 | INFO     | [job] validate thread has finished
[2025-04-20 17:36:03] 2025-04-20 07:35:46,121 | INFO     | [job] create_data_payload thread has finished
[2025-04-20 17:36:03] 2025-04-20 07:35:46,262 | INFO     | all payload control threads have been joined
[2025-04-20 17:36:03] 2025-04-20 07:35:46,472 | INFO     | all job control threads have been joined
[2025-04-20 17:36:03] 2025-04-20 07:35:46,544 | INFO     | [payload] validate_post thread has finished
[2025-04-20 17:36:03] 2025-04-20 07:35:46,673 | INFO     | [payload] failed_post thread has finished
[2025-04-20 17:36:03] 2025-04-20 07:35:46,782 | INFO     | [data] control thread has finished
[2025-04-20 17:36:03] 2025-04-20 07:35:46,919 | INFO     | [data] copytool_out thread has finished
[2025-04-20 17:36:03] 2025-04-20 07:35:46,987 | INFO     | [payload] execute_payloads thread has finished
[2025-04-20 17:36:03] 2025-04-20 07:35:47,268 | INFO     | [payload] control thread has finished
[2025-04-20 17:36:03] 2025-04-20 07:35:47,398 | INFO     | [data] copytool_in thread has finished
[2025-04-20 17:36:03] 2025-04-20 07:35:47,414 | INFO     | [payload] validate_pre thread has finished
[2025-04-20 17:36:03] 2025-04-20 07:35:47,478 | INFO     | [job] control thread has finished
[2025-04-20 17:36:03] 2025-04-20 07:35:48,920 | INFO     | [data] queue_monitor thread has finished
[2025-04-20 17:36:03] 2025-04-20 07:35:55,010 | INFO     | job.realtimelogging is not enabled
[2025-04-20 17:36:03] 2025-04-20 07:35:56,018 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-20 17:36:03] 2025-04-20 07:35:57,931 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 132504626853696)>', '<ExcThread(monitor, started 132503432066816)>']
[2025-04-20 17:36:03] 2025-04-20 07:35:57,996 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-20 17:36:03] 2025-04-20 07:35:57,996 | INFO     | [monitor] control thread has ended
[2025-04-20 17:36:03] 2025-04-20 07:36:02,957 | INFO     | all workflow threads have been joined
[2025-04-20 17:36:03] 2025-04-20 07:36:02,957 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-20 17:36:03] 2025-04-20 07:36:02,957 | INFO     | traces error code: 0
[2025-04-20 17:36:03] 2025-04-20 07:36:02,958 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-20 17:36:03] 2025-04-20 07:36:03,037 [wrapper] ==== pilot stdout END ====
[2025-04-20 17:36:03] 2025-04-20 07:36:03,043 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-20 17:36:03] 2025-04-20 07:36:03,047 [wrapper] pilotpid: 219003
[2025-04-20 17:36:03] 2025-04-20 07:36:03,051 [wrapper] Pilot exit status: 0
[2025-04-20 17:36:03] 2025-04-20 07:36:03,069 [wrapper] pandaids: 6608145852
[2025-04-20 17:36:03] 2025-04-20 07:36:03,131 [wrapper] cleanup supervisor_pilot  240904 219004
[2025-04-20 17:36:03] 2025-04-20 07:36:03,135 [wrapper] Test setup, not cleaning
[2025-04-20 17:36:03] 2025-04-20 07:36:03,140 [wrapper] apfmon messages muted
[2025-04-20 17:36:03] 2025-04-20 07:36:03,144 [wrapper] ==== wrapper stdout END ====
[2025-04-20 17:36:03] 2025-04-20 07:36:03,149 [wrapper] ==== wrapper stderr END ====
[2025-04-20 17:36:03]  *** Error codes and diagnostics ***
[2025-04-20 17:36:03]     "exeErrorCode": 0,
[2025-04-20 17:36:03]     "exeErrorDiag": "",
[2025-04-20 17:36:03]     "pilotErrorCode": 0,
[2025-04-20 17:36:03]     "pilotErrorDiag": "",
[2025-04-20 17:36:03]  *** Listing of results directory ***
[2025-04-20 17:36:03] total 416668
[2025-04-20 17:36:03] -rw-r--r-- 1 boinc boinc    495897 Apr 20 06:43 pilot3.tar.gz
[2025-04-20 17:36:03] -rw-r--r-- 1 boinc boinc      5111 Apr 20 07:03 queuedata.json
[2025-04-20 17:36:03] -rwx------ 1 boinc boinc     37140 Apr 20 07:03 runpilot2-wrapper.sh
[2025-04-20 17:36:03] -rw-r--r-- 1 boinc boinc       100 Apr 20 15:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-20 17:36:03] -rwxr-xr-x 1 boinc boinc      7986 Apr 20 15:51 run_atlas
[2025-04-20 17:36:03] -rw-r--r-- 1 boinc boinc       105 Apr 20 15:51 job.xml
[2025-04-20 17:36:03] -rw-r--r-- 2 boinc boinc 223493482 Apr 20 15:51 EVNT.44075481._003440.pool.root.1
[2025-04-20 17:36:03] -rw-r--r-- 1 boinc boinc      6256 Apr 20 15:51 init_data.xml
[2025-04-20 17:36:03] -rw-r--r-- 2 boinc boinc     17569 Apr 20 15:51 start_atlas.sh
[2025-04-20 17:36:03] drwxrwx--x 2 boinc boinc      4096 Apr 20 15:51 shared
[2025-04-20 17:36:03] -rw-r--r-- 2 boinc boinc    508886 Apr 20 15:51 input.tar.gz
[2025-04-20 17:36:03] -rw-r--r-- 1 boinc boinc         0 Apr 20 15:51 boinc_lockfile
[2025-04-20 17:36:03] -rw-r--r-- 1 boinc boinc      2577 Apr 20 15:51 pandaJob.out
[2025-04-20 17:36:03] -rw------- 1 boinc boinc       424 Apr 20 15:51 setup.sh.local
[2025-04-20 17:36:03] -rw------- 1 boinc boinc    991284 Apr 20 15:51 agis_schedconf.cvmfs.json
[2025-04-20 17:36:03] -rw------- 1 boinc boinc   1618536 Apr 20 15:51 agis_ddmendpoints.agis.ALL.json
[2025-04-20 17:36:03] drwx------ 4 boinc boinc      4096 Apr 20 15:51 pilot3
[2025-04-20 17:36:03] -rw------- 1 boinc boinc        96 Apr 20 17:34 pilot_heartbeat.json
[2025-04-20 17:36:03] -rw------- 1 boinc boinc 198363352 Apr 20 17:35 HITS.44075483._088209.pool.root.1
[2025-04-20 17:36:03] -rw-r--r-- 1 boinc boinc       529 Apr 20 17:35 boinc_task_state.xml
[2025-04-20 17:36:03] -rw------- 1 boinc boinc      1013 Apr 20 17:35 memory_monitor_summary.json
[2025-04-20 17:36:03] -rw------- 1 boinc boinc    227049 Apr 20 17:35 log.44075483._088209.job.log.tgz.1
[2025-04-20 17:36:03] -rw------- 1 boinc boinc      7650 Apr 20 17:35 heartbeat.json
[2025-04-20 17:36:03] -rw-r--r-- 1 boinc boinc      8192 Apr 20 17:36 boinc_mmap_file
[2025-04-20 17:36:03] -rw-r--r-- 1 boinc boinc        27 Apr 20 17:36 wrapper_checkpoint.txt
[2025-04-20 17:36:03] -rw------- 1 boinc boinc      4610 Apr 20 17:36 pilotlog.txt
[2025-04-20 17:36:03] -rw------- 1 boinc boinc    246999 Apr 20 17:36 log.44075483._088209.job.log.1
[2025-04-20 17:36:03] -rw------- 1 boinc boinc       357 Apr 20 17:36 output.list
[2025-04-20 17:36:03] -rw-r--r-- 1 boinc boinc       620 Apr 20 17:36 runtime_log
[2025-04-20 17:36:03] -rw------- 1 boinc boinc    491520 Apr 20 17:36 result.tar.gz
[2025-04-20 17:36:03] -rw-r--r-- 1 boinc boinc     10993 Apr 20 17:36 runtime_log.err
[2025-04-20 17:36:03] -rw------- 1 boinc boinc       648 Apr 20 17:36 b2bLDmmWUQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmDuiLDm1o17wm.diag
[2025-04-20 17:36:03] -rw-r--r-- 1 boinc boinc     21899 Apr 20 17:36 stderr.txt
[2025-04-20 17:36:03] HITS file was successfully produced:
[2025-04-20 17:36:03] -rw------- 1 boinc boinc 198363352 Apr 20 17:35 shared/HITS.pool.root.1
[2025-04-20 17:36:03]  *** Contents of shared directory: ***
[2025-04-20 17:36:03] total 412976
[2025-04-20 17:36:03] -rw-r--r-- 2 boinc boinc 223493482 Apr 20 15:51 ATLAS.root_0
[2025-04-20 17:36:03] -rw-r--r-- 2 boinc boinc     17569 Apr 20 15:51 start_atlas.sh
[2025-04-20 17:36:03] -rw-r--r-- 2 boinc boinc    508886 Apr 20 15:51 input.tar.gz
[2025-04-20 17:36:03] -rw------- 1 boinc boinc 198363352 Apr 20 17:35 HITS.pool.root.1
[2025-04-20 17:36:03] -rw------- 1 boinc boinc    491520 Apr 20 17:36 result.tar.gz
17:36:05 (215369): run_atlas exited; CPU time 24526.007701
17:36:05 (215369): called boinc_finish(0)

</stderr_txt>
]]>

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