Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
12:12:40 (155726): wrapper (7.7.26015): starting
12:12:40 (155726): wrapper: running run_atlas (--nthreads 5)
[2025-04-20 12:12:40] Arguments: --nthreads 5
[2025-04-20 12:12:40] Threads: 5
[2025-04-20 12:12:40] Checking for CVMFS
[2025-04-20 12:12:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-20 12:12:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-20 12:12:41] Running cvmfs_config stat atlas.cern.ch
[2025-04-20 12:12:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-20 12:12:41] 2.12.7.0 3367 328 47088 145058 2 55 3337140 4096000 0 130560 1 385612 99.990 287421 1627 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-04-20 12:12:41] CVMFS is ok
[2025-04-20 12:12:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-20 12:12:41] Small home clusters do not require a local http proxy but it is suggested if
[2025-04-20 12:12:41] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-04-20 12:12:41] Further information can be found at the LHC@home message board.
[2025-04-20 12:12:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-20 12:12:41] Checking for apptainer binary...
[2025-04-20 12:12:41] apptainer is not installed, using version from CVMFS
[2025-04-20 12:12:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-20 12:12:42] BoincUbuntu
[2025-04-20 12:12:42] apptainer works
[2025-04-20 12:12:42] Set ATHENA_PROC_NUMBER=5
[2025-04-20 12:12:42] Set ATHENA_CORE_NUMBER=5
[2025-04-20 12:12:42] Starting ATLAS job with PandaID=6608145989
[2025-04-20 12:12:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-20 14:04:30]  *** The last 200 lines of the pilot log: ***
[2025-04-20 14:04:30]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6608145989/log.44075483._088236.job.log.tgz.1
[2025-04-20 14:04:30]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/dd/e7/log.44075483._088236.job.log.tgz.1
[2025-04-20 14:04:30]  workdir=None
[2025-04-20 14:04:30] ]
[2025-04-20 14:04:30] 2025-04-20 04:03:59,918 | INFO     | transferring file log.44075483._088236.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6608145989/log.44075483._088236.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-04-20 14:04:30] 2025-04-20 04:03:59,919 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6608145989/log.44075483._088236.job.log.tgz.1 /var/lib/boinc/slots/0/log.44075483._088236.job
[2025-04-20 14:04:30] 2025-04-20 04:03:59,954 | INFO     | adding to output.list: log.44075483._088236.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/dd/e7/log.44075483._088236.job.log.tg
[2025-04-20 14:04:30] 2025-04-20 04:03:59,955 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-20 14:04:30] 2025-04-20 04:03:59,955 | INFO     | summary of transferred files:
[2025-04-20 14:04:30] 2025-04-20 04:03:59,955 | INFO     |  -- lfn=log.44075483._088236.job.log.tgz.1, status_code=0, status=transferred
[2025-04-20 14:04:30] 2025-04-20 04:03:59,955 | INFO     | stage-out finished correctly
[2025-04-20 14:04:30] 2025-04-20 04:04:00,288 | INFO     | PID=159359 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-04-20 14:04:30] 2025-04-20 04:04:00,763 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-20 14:04:30] 2025-04-20 04:04:02,443 | WARNING  | process 165770 can no longer be monitored (due to stat problems) - aborting
[2025-04-20 14:04:30] 2025-04-20 04:04:02,443 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6608145989/memory_monitor_summary.json (trf name=prmon)
[2025-04-20 14:04:30] 2025-04-20 04:04:02,518 | INFO     | number of running child processes to parent process 165770: 1
[2025-04-20 14:04:30] 2025-04-20 04:04:02,518 | INFO     | maximum number of monitored processes: 6
[2025-04-20 14:04:30] 2025-04-20 04:04:02,571 | INFO     | job 6608145989 has state=finished
[2025-04-20 14:04:30] 2025-04-20 04:04:02,572 | INFO     | preparing for final server update for job 6608145989 in state='finished'
[2025-04-20 14:04:30] 2025-04-20 04:04:02,572 | INFO     | this job has now completed (state=finished)
[2025-04-20 14:04:30] 2025-04-20 04:04:02,572 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-20 14:04:30] 2025-04-20 04:04:02,572 | INFO     | log transfer has been attempted: DONE
[2025-04-20 14:04:30] 2025-04-20 04:04:02,573 | INFO     | job 6608145989 has finished - writing final server update
[2025-04-20 14:04:30] 2025-04-20 04:04:02,573 | INFO     | total number of processed events: 400 (read)
[2025-04-20 14:04:30] 2025-04-20 04:04:02,584 | INFO     | executing command: lscpu
[2025-04-20 14:04:30] 2025-04-20 04:04:02,636 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-20 14:04:30] 2025-04-20 04:04:05,020 | INFO     | monitor loop #146: job 0:6608145989 is in state 'finished'
[2025-04-20 14:04:30] 2025-04-20 04:04:05,021 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 14:04:30] 2025-04-20 04:04:07,524 | INFO     | monitor loop #147: job 0:6608145989 is in state 'finished'
[2025-04-20 14:04:30] 2025-04-20 04:04:07,525 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 14:04:30] 2025-04-20 04:04:10,028 | INFO     | monitor loop #148: job 0:6608145989 is in state 'finished'
[2025-04-20 14:04:30] 2025-04-20 04:04:10,028 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 14:04:30] 2025-04-20 04:04:12,532 | INFO     | monitor loop #149: job 0:6608145989 is in state 'finished'
[2025-04-20 14:04:30] 2025-04-20 04:04:12,532 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 14:04:30] 2025-04-20 04:04:15,036 | INFO     | monitor loop #150: job 0:6608145989 is in state 'finished'
[2025-04-20 14:04:30] 2025-04-20 04:04:15,036 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 14:04:30] 2025-04-20 04:04:17,540 | INFO     | monitor loop #151: job 0:6608145989 is in state 'finished'
[2025-04-20 14:04:30] 2025-04-20 04:04:17,540 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 14:04:30] 2025-04-20 04:04:17,704 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-20 14:04:30] 2025-04-20 04:04:17,704 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6608145989/memory_monitor_summary.json (trf name=prmon)
[2025-04-20 14:04:30] 2025-04-20 04:04:17,705 | INFO     | extracted standard info from prmon json
[2025-04-20 14:04:30] 2025-04-20 04:04:17,705 | INFO     | extracted standard memory fields from prmon json
[2025-04-20 14:04:30] 2025-04-20 04:04:17,705 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-20 14:04:30] 2025-04-20 04:04:17,706 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-20 14:04:30] 2025-04-20 04:04:17,706 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-20 14:04:30] 2025-04-20 04:04:17,707 | INFO     | fitting pss+swap vs Time
[2025-04-20 14:04:30] 2025-04-20 04:04:17,707 | INFO     | sum of square deviations: 245362030.4444446
[2025-04-20 14:04:30] 2025-04-20 04:04:17,708 | INFO     | sum of deviations: 26128061445.55555
[2025-04-20 14:04:30] 2025-04-20 04:04:17,708 | INFO     | mean x: 1745118551.2222223
[2025-04-20 14:04:30] 2025-04-20 04:04:17,708 | INFO     | mean y: 2383328.527777778
[2025-04-20 14:04:30] 2025-04-20 04:04:17,708 | INFO     | -- intersect: -185831442115.12488
[2025-04-20 14:04:30] 2025-04-20 04:04:17,708 | INFO     | intersect: -185831442115.12488
[2025-04-20 14:04:30] 2025-04-20 04:04:17,708 | INFO     | chi2: 2.5376964335752232
[2025-04-20 14:04:30] 2025-04-20 04:04:17,708 | INFO     | -- intersect: -185831442115.12488
[2025-04-20 14:04:30] 2025-04-20 04:04:17,708 | INFO     | current memory leak: 106.49 B/s (using 72 data points, chi2=2.54)
[2025-04-20 14:04:30] 2025-04-20 04:04:17,709 | INFO     | ..............................
[2025-04-20 14:04:30] 2025-04-20 04:04:17,709 | INFO     | . Timing measurements:
[2025-04-20 14:04:30] 2025-04-20 04:04:17,709 | INFO     | . get job = 0 s
[2025-04-20 14:04:30] 2025-04-20 04:04:17,709 | INFO     | . initial setup = 5 s
[2025-04-20 14:04:30] 2025-04-20 04:04:17,709 | INFO     | . payload setup = 12 s
[2025-04-20 14:04:30] 2025-04-20 04:04:17,709 | INFO     | . stage-in = 0 s
[2025-04-20 14:04:30] 2025-04-20 04:04:17,709 | INFO     | . payload execution = 6617 s
[2025-04-20 14:04:30] 2025-04-20 04:04:17,709 | INFO     | . stage-out = 0 s
[2025-04-20 14:04:30] 2025-04-20 04:04:17,709 | INFO     | . log creation = 0 s
[2025-04-20 14:04:30] 2025-04-20 04:04:17,709 | INFO     | ..............................
[2025-04-20 14:04:30] 2025-04-20 04:04:17,780 | INFO     | 
[2025-04-20 14:04:30] 2025-04-20 04:04:17,780 | INFO     | job summary report
[2025-04-20 14:04:30] 2025-04-20 04:04:17,780 | INFO     | --------------------------------------------------
[2025-04-20 14:04:30] 2025-04-20 04:04:17,780 | INFO     | PanDA job id: 6608145989
[2025-04-20 14:04:30] 2025-04-20 04:04:17,781 | INFO     | task id: 44075483
[2025-04-20 14:04:30] 2025-04-20 04:04:17,781 | INFO     | errors: (none)
[2025-04-20 14:04:30] 2025-04-20 04:04:17,781 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-20 14:04:30] 2025-04-20 04:04:17,781 | INFO     | pilot state: finished 
[2025-04-20 14:04:30] 2025-04-20 04:04:17,781 | INFO     | transexitcode: 0
[2025-04-20 14:04:30] 2025-04-20 04:04:17,781 | INFO     | exeerrorcode: 0
[2025-04-20 14:04:30] 2025-04-20 04:04:17,781 | INFO     | exeerrordiag: 
[2025-04-20 14:04:30] 2025-04-20 04:04:17,782 | INFO     | exitcode: 0
[2025-04-20 14:04:30] 2025-04-20 04:04:17,782 | INFO     | exitmsg: OK
[2025-04-20 14:04:30] 2025-04-20 04:04:17,782 | INFO     | cpuconsumptiontime: 26718 s
[2025-04-20 14:04:30] 2025-04-20 04:04:17,782 | INFO     | nevents: 400
[2025-04-20 14:04:30] 2025-04-20 04:04:17,782 | INFO     | neventsw: 0
[2025-04-20 14:04:30] 2025-04-20 04:04:17,782 | INFO     | pid: 165770
[2025-04-20 14:04:30] 2025-04-20 04:04:17,782 | INFO     | pgrp: 165770
[2025-04-20 14:04:30] 2025-04-20 04:04:17,782 | INFO     | corecount: 5
[2025-04-20 14:04:30] 2025-04-20 04:04:17,782 | INFO     | event service: False
[2025-04-20 14:04:30] 2025-04-20 04:04:17,782 | INFO     | sizes: {0: 2426852, 9: 2427058, 11: 2427086, 6633: 2452619, 6635: 2461560, 6636: 2461616, 6653: 2461914}
[2025-04-20 14:04:30] 2025-04-20 04:04:17,782 | INFO     | --------------------------------------------------
[2025-04-20 14:04:30] 2025-04-20 04:04:17,782 | INFO     | 
[2025-04-20 14:04:30] 2025-04-20 04:04:17,782 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-04-20 14:04:30] 2025-04-20 04:04:17,843 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-20 14:04:30] 2025-04-20 04:04:17,843 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-20 14:04:30] 2025-04-20 04:04:17,843 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-20 14:04:30] 2025-04-20 04:04:17,843 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-20 14:04:30] 2025-04-20 04:04:17,843 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-20 14:04:30] 2025-04-20 04:04:17,843 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-20 14:04:30] 2025-04-20 04:04:17,843 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-20 14:04:30] 2025-04-20 04:04:17,843 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-20 14:04:30] 2025-04-20 04:04:17,843 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-20 14:04:30] 2025-04-20 04:04:17,844 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-20 14:04:30] 2025-04-20 04:04:17,844 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-20 14:04:30] 2025-04-20 04:04:17,844 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-20 14:04:30] 2025-04-20 04:04:17,844 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-20 14:04:30] 2025-04-20 04:04:17,844 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-20 14:04:30] 2025-04-20 04:04:17,844 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-20 14:04:30] 2025-04-20 04:04:17,844 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-20 14:04:30] 2025-04-20 04:04:17,844 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-20 14:04:30] 2025-04-20 04:04:17,844 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-20 14:04:30] 2025-04-20 04:04:17,844 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-20 14:04:30] 2025-04-20 04:04:17,844 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-20 14:04:30] 2025-04-20 04:04:17,844 | INFO     | job 6608145989 has completed (purged errors)
[2025-04-20 14:04:30] 2025-04-20 04:04:17,844 | INFO     | overall cleanup function is called
[2025-04-20 14:04:30] 2025-04-20 04:04:18,853 | INFO     | --- collectZombieJob: --- 10, [165770]
[2025-04-20 14:04:30] 2025-04-20 04:04:18,853 | INFO     | zombie collector waiting for pid 165770
[2025-04-20 14:04:30] 2025-04-20 04:04:18,853 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-20 14:04:30] 2025-04-20 04:04:18,853 | INFO     | collected zombie processes
[2025-04-20 14:04:30] 2025-04-20 04:04:18,853 | INFO     | will attempt to kill all subprocesses of pid=165770
[2025-04-20 14:04:30] 2025-04-20 04:04:18,931 | INFO     | process IDs to be killed: [165770] (in reverse order)
[2025-04-20 14:04:30] 2025-04-20 04:04:19,045 | WARNING  | found no corresponding commands to process id(s)
[2025-04-20 14:04:30] 2025-04-20 04:04:19,045 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-20 14:04:30] 2025-04-20 04:04:19,048 | INFO     | did not find any defunct processes belonging to 165770
[2025-04-20 14:04:30] 2025-04-20 04:04:19,049 | INFO     | did not find any defunct processes belonging to 165770
[2025-04-20 14:04:30] 2025-04-20 04:04:19,050 | INFO     | ready for new job
[2025-04-20 14:04:30] 2025-04-20 04:04:19,050 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-20 14:04:30] 2025-04-20 04:04:19,051 | INFO     | **************************************
[2025-04-20 14:04:30] 2025-04-20 04:04:19,051 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-20 14:04:30] 2025-04-20 04:04:19,051 | INFO     | **************************************
[2025-04-20 14:04:30] 2025-04-20 04:04:19,052 | INFO     | 
[2025-04-20 14:04:30] 2025-04-20 04:04:19,052 | INFO     | pilot is running in a VM
[2025-04-20 14:04:30] 2025-04-20 04:04:19,052 | INFO     | architecture information:
[2025-04-20 14:04:30] 2025-04-20 04:04:19,053 | INFO     | executing command: cat /etc/os-release
[2025-04-20 14:04:30] 2025-04-20 04:04:19,080 | INFO     | cat /etc/os-release:
[2025-04-20 14:04:30] NAME="CentOS Linux"
[2025-04-20 14:04:30] VERSION="7 (Core)"
[2025-04-20 14:04:30] ID="centos"
[2025-04-20 14:04:30] ID_LIKE="rhel fedora"
[2025-04-20 14:04:30] VERSION_ID="7"
[2025-04-20 14:04:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-20 14:04:30] ANSI_COLOR="0;31"
[2025-04-20 14:04:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-20 14:04:30] HOME_URL="https://www.centos.org/"
[2025-04-20 14:04:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-20 14:04:30] 
[2025-04-20 14:04:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-20 14:04:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-20 14:04:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-20 14:04:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-20 14:04:30] 
[2025-04-20 14:04:30] 2025-04-20 04:04:19,081 | INFO     | **************************************
[2025-04-20 14:04:30] 2025-04-20 04:04:19,582 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-04-20 14:04:30] 2025-04-20 04:04:19,613 | INFO     | sufficient remaining disk space (90540343296 B)
[2025-04-20 14:04:30] 2025-04-20 04:04:19,613 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-20 14:04:30] 2025-04-20 04:04:19,613 | INFO     | current server update state: UPDATING_FINAL
[2025-04-20 14:04:30] 2025-04-20 04:04:19,613 | INFO     | update_server=False
[2025-04-20 14:04:30] 2025-04-20 04:04:19,613 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-20 14:04:30] 2025-04-20 04:04:19,614 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-20 14:04:30] 2025-04-20 04:04:19,994 | INFO     | all payload control threads have been joined
[2025-04-20 14:04:30] 2025-04-20 04:04:20,046 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-20 14:04:30] 2025-04-20 04:04:20,046 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-20 14:04:30] 2025-04-20 04:04:20,046 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-20 14:04:30] 2025-04-20 04:04:20,047 | INFO     | will abort loop
[2025-04-20 14:04:30] 2025-04-20 04:04:20,287 | INFO     | all data control threads have been joined
[2025-04-20 14:04:30] 2025-04-20 04:04:20,340 | INFO     | found 0 job(s) in 20 queues
[2025-04-20 14:04:30] 2025-04-20 04:04:20,340 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-20 14:04:30] 2025-04-20 04:04:20,340 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-20 14:04:30] 2025-04-20 04:04:20,357 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-20 14:04:30] 2025-04-20 04:04:20,554 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-20 14:04:30] 2025-04-20 04:04:20,619 | INFO     | [job] retrieve thread has finished
[2025-04-20 14:04:30] 2025-04-20 04:04:20,620 | INFO     | [job] queue monitor thread has finished
[2025-04-20 14:04:30] 2025-04-20 04:04:20,734 | INFO     | [payload] failed_post thread has finished
[2025-04-20 14:04:30] 2025-04-20 04:04:20,999 | INFO     | [payload] control thread has finished
[2025-04-20 14:04:30] 2025-04-20 04:04:21,052 | INFO     | [job] job monitor thread has finished
[2025-04-20 14:04:30] 2025-04-20 04:04:21,109 | INFO     | all job control threads have been joined
[2025-04-20 14:04:30] 2025-04-20 04:04:21,234 | INFO     | [payload] validate_pre thread has finished
[2025-04-20 14:04:30] 2025-04-20 04:04:21,293 | INFO     | [data] control thread has finished
[2025-04-20 14:04:30] 2025-04-20 04:04:21,367 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-20 14:04:30] 2025-04-20 04:04:21,607 | INFO     | [data] copytool_in thread has finished
[2025-04-20 14:04:30] 2025-04-20 04:04:21,808 | INFO     | [job] validate thread has finished
[2025-04-20 14:04:30] 2025-04-20 04:04:21,830 | INFO     | [job] create_data_payload thread has finished
[2025-04-20 14:04:30] 2025-04-20 04:04:21,915 | INFO     | [payload] validate_post thread has finished
[2025-04-20 14:04:30] 2025-04-20 04:04:21,920 | INFO     | [payload] execute_payloads thread has finished
[2025-04-20 14:04:30] 2025-04-20 04:04:22,115 | INFO     | [job] control thread has finished
[2025-04-20 14:04:30] 2025-04-20 04:04:22,562 | INFO     | [data] copytool_out thread has finished
[2025-04-20 14:04:30] 2025-04-20 04:04:24,365 | INFO     | [data] queue_monitor thread has finished
[2025-04-20 14:04:30] 2025-04-20 04:04:24,985 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 130976831403840)>', '<ExcThread(monitor, started 130975614883584)>']
[2025-04-20 14:04:30] 2025-04-20 04:04:25,368 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-20 14:04:30] 2025-04-20 04:04:25,368 | INFO     | [monitor] control thread has ended
[2025-04-20 14:04:30] 2025-04-20 04:04:30,011 | INFO     | all workflow threads have been joined
[2025-04-20 14:04:30] 2025-04-20 04:04:30,012 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-20 14:04:30] 2025-04-20 04:04:30,012 | INFO     | traces error code: 0
[2025-04-20 14:04:30] 2025-04-20 04:04:30,012 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-20 14:04:30] 2025-04-20 04:04:30,129 [wrapper] ==== pilot stdout END ====
[2025-04-20 14:04:30] 2025-04-20 04:04:30,136 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-20 14:04:30] 2025-04-20 04:04:30,143 [wrapper] pilotpid: 159359
[2025-04-20 14:04:30] 2025-04-20 04:04:30,149 [wrapper] Pilot exit status: 0
[2025-04-20 14:04:30] 2025-04-20 04:04:30,177 [wrapper] pandaids: 6608145989
[2025-04-20 14:04:30] 2025-04-20 04:04:30,259 [wrapper] cleanup supervisor_pilot  181859 159360
[2025-04-20 14:04:30] 2025-04-20 04:04:30,266 [wrapper] Test setup, not cleaning
[2025-04-20 14:04:30] 2025-04-20 04:04:30,275 [wrapper] apfmon messages muted
[2025-04-20 14:04:30] 2025-04-20 04:04:30,282 [wrapper] ==== wrapper stdout END ====
[2025-04-20 14:04:30] 2025-04-20 04:04:30,288 [wrapper] ==== wrapper stderr END ====
[2025-04-20 14:04:30]  *** Error codes and diagnostics ***
[2025-04-20 14:04:30]     "exeErrorCode": 0,
[2025-04-20 14:04:30]     "exeErrorDiag": "",
[2025-04-20 14:04:30]     "pilotErrorCode": 0,
[2025-04-20 14:04:30]     "pilotErrorDiag": "",
[2025-04-20 14:04:30]  *** Listing of results directory ***
[2025-04-20 14:04:30] total 415260
[2025-04-20 14:04:30] -rw-r--r-- 1 boinc boinc    495897 Apr 20 06:43 pilot3.tar.gz
[2025-04-20 14:04:30] -rwx------ 1 boinc boinc     37140 Apr 20 07:03 runpilot2-wrapper.sh
[2025-04-20 14:04:30] -rw-r--r-- 1 boinc boinc      5111 Apr 20 07:03 queuedata.json
[2025-04-20 14:04:30] -rw-r--r-- 1 boinc boinc       100 Apr 20 12:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-20 14:04:30] -rwxr-xr-x 1 boinc boinc      7986 Apr 20 12:12 run_atlas
[2025-04-20 14:04:30] -rw-r--r-- 1 boinc boinc       105 Apr 20 12:12 job.xml
[2025-04-20 14:04:30] -rw-r--r-- 1 boinc boinc      6256 Apr 20 12:12 init_data.xml
[2025-04-20 14:04:30] -rw-r--r-- 2 boinc boinc 225184581 Apr 20 12:12 EVNT.44075481._003441.pool.root.1
[2025-04-20 14:04:30] -rw-r--r-- 2 boinc boinc     17569 Apr 20 12:12 start_atlas.sh
[2025-04-20 14:04:30] drwxrwx--x 2 boinc boinc      4096 Apr 20 12:12 shared
[2025-04-20 14:04:30] -rw-r--r-- 2 boinc boinc    508890 Apr 20 12:12 input.tar.gz
[2025-04-20 14:04:30] -rw-r--r-- 1 boinc boinc         0 Apr 20 12:12 boinc_lockfile
[2025-04-20 14:04:30] -rw-r--r-- 1 boinc boinc      2579 Apr 20 12:12 pandaJob.out
[2025-04-20 14:04:30] -rw------- 1 boinc boinc       424 Apr 20 12:12 setup.sh.local
[2025-04-20 14:04:30] -rw------- 1 boinc boinc    991300 Apr 20 12:12 agis_schedconf.cvmfs.json
[2025-04-20 14:04:30] -rw------- 1 boinc boinc   1618536 Apr 20 12:13 agis_ddmendpoints.agis.ALL.json
[2025-04-20 14:04:30] drwx------ 4 boinc boinc      4096 Apr 20 12:13 pilot3
[2025-04-20 14:04:30] -rw-r--r-- 1 boinc boinc       529 Apr 20 14:03 boinc_task_state.xml
[2025-04-20 14:04:30] -rw------- 1 boinc boinc 195171122 Apr 20 14:03 HITS.44075483._088236.pool.root.1
[2025-04-20 14:04:30] -rw------- 1 boinc boinc        96 Apr 20 14:03 pilot_heartbeat.json
[2025-04-20 14:04:30] -rw------- 1 boinc boinc      1015 Apr 20 14:03 memory_monitor_summary.json
[2025-04-20 14:04:30] -rw------- 1 boinc boinc    231541 Apr 20 14:03 log.44075483._088236.job.log.tgz.1
[2025-04-20 14:04:30] -rw------- 1 boinc boinc      7656 Apr 20 14:04 heartbeat.json
[2025-04-20 14:04:30] -rw-r--r-- 1 boinc boinc      8192 Apr 20 14:04 boinc_mmap_file
[2025-04-20 14:04:30] -rw-r--r-- 1 boinc boinc        27 Apr 20 14:04 wrapper_checkpoint.txt
[2025-04-20 14:04:30] -rw------- 1 boinc boinc      4601 Apr 20 14:04 pilotlog.txt
[2025-04-20 14:04:30] -rw------- 1 boinc boinc    270186 Apr 20 14:04 log.44075483._088236.job.log.1
[2025-04-20 14:04:30] -rw------- 1 boinc boinc       357 Apr 20 14:04 output.list
[2025-04-20 14:04:30] -rw-r--r-- 1 boinc boinc       620 Apr 20 14:04 runtime_log
[2025-04-20 14:04:30] -rw------- 1 boinc boinc    522240 Apr 20 14:04 result.tar.gz
[2025-04-20 14:04:30] -rw-r--r-- 1 boinc boinc     10993 Apr 20 14:04 runtime_log.err
[2025-04-20 14:04:30] -rw------- 1 boinc boinc       648 Apr 20 14:04 LQdKDmDWUQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm2tiLDmtjsF2n.diag
[2025-04-20 14:04:30] -rw-r--r-- 1 boinc boinc     22390 Apr 20 14:04 stderr.txt
[2025-04-20 14:04:30] HITS file was successfully produced:
[2025-04-20 14:04:30] -rw------- 1 boinc boinc 195171122 Apr 20 14:03 shared/HITS.pool.root.1
[2025-04-20 14:04:30]  *** Contents of shared directory: ***
[2025-04-20 14:04:30] total 411544
[2025-04-20 14:04:30] -rw-r--r-- 2 boinc boinc 225184581 Apr 20 12:12 ATLAS.root_0
[2025-04-20 14:04:30] -rw-r--r-- 2 boinc boinc     17569 Apr 20 12:12 start_atlas.sh
[2025-04-20 14:04:30] -rw-r--r-- 2 boinc boinc    508890 Apr 20 12:12 input.tar.gz
[2025-04-20 14:04:30] -rw------- 1 boinc boinc 195171122 Apr 20 14:03 HITS.pool.root.1
[2025-04-20 14:04:30] -rw------- 1 boinc boinc    522240 Apr 20 14:04 result.tar.gz
14:04:31 (155726): run_atlas exited; CPU time 25724.963175
14:04:31 (155726): called boinc_finish(0)

</stderr_txt>
]]>

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