Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-20 00:01:54 (28872): Detected: vboxwrapper 26206
2025-04-20 00:01:54 (28872): Detected: BOINC client v8.0.2
2025-04-20 00:01:54 (28872): Detected: VirtualBox VboxManage Interface (Version: 7.0.16)
2025-04-20 00:01:55 (28872): Successfully copied 'init_data.xml' to the shared directory.
2025-04-20 00:01:55 (28872): Create VM. (boinc_b3654b8344017ff5, slot#6)
2025-04-20 00:01:55 (28872): Setting Memory Size for VM. (4800MB)
2025-04-20 00:01:55 (28872): Setting CPU Count for VM. (8)
2025-04-20 00:01:55 (28872): Setting Chipset Options for VM.
2025-04-20 00:01:55 (28872): Setting Graphics Controller Options for VM.
2025-04-20 00:01:55 (28872): Setting Boot Options for VM.
2025-04-20 00:01:56 (28872): Setting Network Configuration for NAT.
2025-04-20 00:01:56 (28872): Enabling VM Network Access.
2025-04-20 00:01:56 (28872): Disabling USB Support for VM.
2025-04-20 00:01:56 (28872): Disabling COM Port Support for VM.
2025-04-20 00:01:56 (28872): Disabling LPT Port Support for VM.
2025-04-20 00:01:56 (28872): Disabling Audio Support for VM.
2025-04-20 00:01:56 (28872): Disabling Clipboard Support for VM.
2025-04-20 00:01:56 (28872): Disabling Drag and Drop Support for VM.
2025-04-20 00:01:57 (28872): Adding storage controller(s) to VM.
2025-04-20 00:01:57 (28872): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-20 00:01:58 (28872): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-20 00:01:59 (28872): forwarding host port 60691 to guest port 80
2025-04-20 00:01:59 (28872): Enabling remote desktop for VM.
2025-04-20 00:01:59 (28872): Required extension pack not installed, remote desktop not enabled.
2025-04-20 00:01:59 (28872): Enabling shared directory for VM.
2025-04-20 00:01:59 (28872): Starting VM using VBoxManage interface. (boinc_b3654b8344017ff5, slot#6)
2025-04-20 00:02:01 (28872): Successfully started VM. (PID = '29331')
2025-04-20 00:02:01 (28872): Reporting VM Process ID to BOINC.
2025-04-20 00:02:01 (28872): Guest Log: BIOS: VirtualBox 7.0.16
2025-04-20 00:02:01 (28872): Guest Log: CPUID EDX: 0x178bfbff
2025-04-20 00:02:01 (28872): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-20 00:02:01 (28872): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-20 00:02:01 (28872): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-20 00:02:01 (28872): Detected: Web Application Enabled (http://localhost:60691)
2025-04-20 00:02:01 (28872): Preference change detected
2025-04-20 00:02:01 (28872): Setting CPU throttle for VM. (100%)
2025-04-20 00:02:01 (28872): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-20 00:02:03 (28872): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-20 00:02:03 (28872): Guest Log: BIOS: Booting from Hard Disk...
2025-04-20 00:02:06 (28872): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-20 00:02:06 (28872): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-20 00:02:06 (28872): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-20 00:02:06 (28872): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-20 00:02:06 (28872): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-20 00:02:06 (28872): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-20 00:02:06 (28872): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-20 00:02:06 (28872): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-20 00:02:06 (28872): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-20 00:02:06 (28872): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-20 00:02:06 (28872): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-20 00:02:06 (28872): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-20 00:02:06 (28872): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-20 00:02:06 (28872): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-20 00:02:06 (28872): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-20 00:02:06 (28872): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-20 00:02:06 (28872): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-20 00:02:06 (28872): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-20 00:02:06 (28872): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-20 00:02:06 (28872): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-20 00:02:06 (28872): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-20 00:02:06 (28872): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-20 00:02:06 (28872): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-20 00:02:06 (28872): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-20 00:02:06 (28872): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-20 00:02:06 (28872): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-20 00:02:06 (28872): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-20 00:02:06 (28872): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-20 00:02:06 (28872): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-20 00:02:06 (28872): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-20 00:02:06 (28872): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-20 00:02:06 (28872): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-20 00:02:16 (28872): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-20 00:02:16 (28872): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-20 00:02:25 (28872): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-20 00:02:25 (28872): Guest Log: 00:00:00.000292 main     Log opened 2025-04-20T00:02:22.743796000Z
2025-04-20 00:02:25 (28872): Guest Log: 00:00:00.000456 main     OS Product: Linux
2025-04-20 00:02:25 (28872): Guest Log: 00:00:00.000515 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-20 00:02:25 (28872): Guest Log: 00:00:00.000556 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-20 00:02:25 (28872): Guest Log: 00:00:00.000596 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-20 00:02:25 (28872): Guest Log: 00:00:00.000597 main     Process ID: 1355
2025-04-20 00:02:25 (28872): Guest Log: 00:00:00.000598 main     Package type: LINUX_64BITS_GENERIC
2025-04-20 00:02:25 (28872): Guest Log: 00:00:00.002723 main     5.2.32 r132073 started. Verbose level = 0
2025-04-20 00:02:25 (28872): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-20 00:02:25 (28872): Guest Log: [INFO] Mounting shared directory
2025-04-20 00:02:25 (28872): Guest Log: [INFO] Checking for init_data.xml
2025-04-20 00:02:31 (28872): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-20 00:02:31 (28872): Guest Log: [INFO] Detected branch: prod
2025-04-20 00:02:31 (28872): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-20 00:02:31 (28872): Guest Log: Copying input files
2025-04-20 00:02:32 (28872): Guest Log: Copied input files into RunAtlas.
2025-04-20 00:02:32 (28872): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-20 00:02:32 (28872): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-20 00:02:32 (28872): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-20 00:02:32 (28872): Guest Log: Further information can be found at the LHC@home message board.
2025-04-20 00:02:43 (28872): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-20 00:02:43 (28872): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-20 00:02:43 (28872): Guest Log: 2.6.3.0 1634 0 30096 145055 3 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-04-20 00:02:44 (28872): Guest Log: copied the webapp to /var/www
2025-04-20 00:02:45 (28872): Guest Log: ATHENA_PROC_NUMBER=8
2025-04-20 00:02:45 (28872): Guest Log: ATHENA_CORE_NUMBER=8
2025-04-20 00:02:45 (28872): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-20 00:02:45 (28872): Guest Log:  *** Starting ATLAS job. (PandaID=6608145186 taskID=44075483) ***
2025-04-20 01:02:15 (28872): VM state change detected. (old = 'running', new = 'paused')
2025-04-20 02:05:44 (28872): VM state change detected. (old = 'paused', new = 'running')
2025-04-20 02:05:54 (28872): Guest Log: 01:00:01.487142 timesync vgsvcTimeSyncWorker: Radical host time change: 3 818 849 000 000ns (HostNow=1 745 114 753 056 000 000 ns HostLast=1 745 110 934 207 000 000 ns)
2025-04-20 02:06:03 (28872): Guest Log: 01:00:11.488994 timesync vgsvcTimeSyncWorker: Radical guest time change: 3 818 878 880 000ns (GuestNow=1 745 114 763 083 507 000 ns GuestLast=1 745 110 944 204 627 000 ns fSetTimeLastLoop=true )
2025-04-20 02:44:31 (28872): Status Report: Elapsed Time: '6000.000000'
2025-04-20 02:44:31 (28872): Status Report: CPU Time: '31054.430000'
2025-04-20 03:06:04 (28872): VM state change detected. (old = 'running', new = 'paused')
2025-04-20 04:07:51 (28872): VM state change detected. (old = 'paused', new = 'running')
2025-04-20 04:07:52 (28872): Guest Log: 02:00:12.435437 timesync vgsvcTimeSyncWorker: Radical host time change: 3 717 861 000 000ns (HostNow=1 745 122 071 981 000 000 ns HostLast=1 745 118 354 120 000 000 ns)
2025-04-20 04:08:02 (28872): Guest Log: 02:00:22.436019 timesync vgsvcTimeSyncWorker: Radical guest time change: 3 717 953 992 000ns (GuestNow=1 745 122 081 982 564 000 ns GuestLast=1 745 118 364 028 572 000 ns fSetTimeLastLoop=true )
2025-04-20 05:08:36 (28872): VM state change detected. (old = 'running', new = 'paused')
2025-04-20 06:11:20 (28872): VM state change detected. (old = 'paused', new = 'running')
2025-04-20 06:11:27 (28872): Guest Log: 03:01:03.397617 timesync vgsvcTimeSyncWorker: Radical host time change: 3 774 276 000 000ns (HostNow=1 745 129 487 312 000 000 ns HostLast=1 745 125 713 036 000 000 ns)
2025-04-20 06:11:37 (28872): Guest Log: 03:01:13.400053 timesync vgsvcTimeSyncWorker: Radical guest time change: 3 774 370 994 000ns (GuestNow=1 745 129 497 314 585 000 ns GuestLast=1 745 125 722 943 591 000 ns fSetTimeLastLoop=true )
2025-04-20 06:28:06 (28872): Status Report: Elapsed Time: '12000.000000'
2025-04-20 06:28:06 (28872): Status Report: CPU Time: '73691.680000'
2025-04-20 06:38:17 (28872): Guest Log:  *** Job finished ***
2025-04-20 06:38:17 (28872): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-20 06:38:17 (28872): Guest Log: 2025-04-20 06:38:08,096 | INFO     | [data] copytool_out thread has finished
2025-04-20 06:38:17 (28872): Guest Log: 2025-04-20 06:38:08,332 | INFO     | [job] queue monitor thread has finished
2025-04-20 06:38:17 (28872): Guest Log: 2025-04-20 06:38:08,619 | INFO     | [data] queue_monitor thread has finished
2025-04-20 06:38:17 (28872): Guest Log: 2025-04-20 06:38:10,677 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139625180092224)>', '<ExcThread(monitor, started 139624705922816)>']
2025-04-20 06:38:17 (28872): Guest Log: 2025-04-20 06:38:11,100 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-20 06:38:17 (28872): Guest Log: 2025-04-20 06:38:11,100 | INFO     | [monitor] control thread has ended
2025-04-20 06:38:17 (28872): Guest Log: 2025-04-20 06:38:15,690 | INFO     | all workflow threads have been joined
2025-04-20 06:38:17 (28872): Guest Log: 2025-04-20 06:38:15,690 | INFO     | end of generic workflow (traces error code: 0)
2025-04-20 06:38:17 (28872): Guest Log: 2025-04-20 06:38:15,691 | INFO     | traces error code: 0
2025-04-20 06:38:17 (28872): Guest Log: 2025-04-20 06:38:15,691 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-20 06:38:17 (28872): Guest Log: 2025-04-20 06:38:15,787 [wrapper] ==== pilot stdout END ====
2025-04-20 06:38:17 (28872): Guest Log: 2025-04-20 06:38:15,793 [wrapper] ==== wrapper stdout RESUME ====
2025-04-20 06:38:17 (28872): Guest Log: 2025-04-20 06:38:15,799 [wrapper] pilotpid: 6011
2025-04-20 06:38:17 (28872): Guest Log: 2025-04-20 06:38:15,804 [wrapper] Pilot exit status: 0
2025-04-20 06:38:17 (28872): Guest Log: 2025-04-20 06:38:15,925 [wrapper] pandaids: 6608145186
2025-04-20 06:38:17 (28872): Guest Log: 2025-04-20 06:38:15,962 [wrapper] cleanup supervisor_pilot 13924 6012
2025-04-20 06:38:17 (28872): Guest Log: 2025-04-20 06:38:15,973 [wrapper] Test setup, not cleaning
2025-04-20 06:38:17 (28872): Guest Log: 2025-04-20 06:38:15,979 [wrapper] apfmon messages muted
2025-04-20 06:38:17 (28872): Guest Log: 2025-04-20 06:38:15,985 [wrapper] ==== wrapper stdout END ====
2025-04-20 06:38:17 (28872): Guest Log: 2025-04-20 06:38:15,991 [wrapper] ==== wrapper stderr END ====
2025-04-20 06:38:17 (28872): Guest Log:  *** Error codes and diagnostics ***
2025-04-20 06:38:17 (28872): Guest Log:     "exeErrorCode": 0,
2025-04-20 06:38:17 (28872): Guest Log:     "exeErrorDiag": "",
2025-04-20 06:38:17 (28872): Guest Log:     "pilotErrorCode": 0,
2025-04-20 06:38:17 (28872): Guest Log:     "pilotErrorDiag": "",
2025-04-20 06:38:17 (28872): Guest Log:  *** Listing of results directory ***
2025-04-20 06:38:17 (28872): Guest Log: total 196336
2025-04-20 06:38:17 (28872): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 19 20:00 pilot3.tar.gz
2025-04-20 06:38:17 (28872): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 19 20:06 queuedata.json
2025-04-20 06:38:17 (28872): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 19 20:07 runpilot2-wrapper.sh
2025-04-20 06:38:17 (28872): Guest Log: -rw-r--r--. 1 atlas atlas    508892 Apr 20 00:02 input.tar.gz
2025-04-20 06:38:17 (28872): Guest Log: -rw-r--r--. 1 atlas atlas     17569 Apr 20 00:02 start_atlas.sh
2025-04-20 06:38:17 (28872): Guest Log: -rw-r--r--. 1 atlas atlas      7391 Apr 20 00:02 init_data.xml
2025-04-20 06:38:17 (28872): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 20 00:02 EVNT.44075481._003420.pool.root.1 -> /data/./ATLAS.root_0
2025-04-20 06:38:17 (28872): Guest Log: -rw-r--r--. 1 atlas atlas      2579 Apr 20 00:02 pandaJob.out
2025-04-20 06:38:17 (28872): Guest Log: -rw-------. 1 atlas atlas       424 Apr 20 00:03 setup.sh.local
2025-04-20 06:38:17 (28872): Guest Log: -rw-------. 1 atlas atlas    991300 Apr 20 00:05 agis_schedconf.cvmfs.json
2025-04-20 06:38:17 (28872): Guest Log: drwx------. 4 atlas atlas      4096 Apr 20 00:05 pilot3
2025-04-20 06:38:17 (28872): Guest Log: -rw-------. 1 atlas atlas 194569718 Apr 20 06:37 HITS.44075483._087712.pool.root.1
2025-04-20 06:38:17 (28872): Guest Log: -rw-------. 1 atlas atlas      1029 Apr 20 06:37 memory_monitor_summary.json
2025-04-20 06:38:17 (28872): Guest Log: -rw-------. 1 atlas atlas   1618536 Apr 20 06:37 agis_ddmendpoints.agis.ALL.json
2025-04-20 06:38:17 (28872): Guest Log: -rw-------. 1 atlas atlas    355569 Apr 20 06:37 log.44075483._087712.job.log.tgz.1
2025-04-20 06:38:17 (28872): Guest Log: -rw-------. 1 atlas atlas        97 Apr 20 06:37 pilot_heartbeat.json
2025-04-20 06:38:17 (28872): Guest Log: -rw-------. 1 atlas atlas      7723 Apr 20 06:38 heartbeat.json
2025-04-20 06:38:17 (28872): Guest Log: -rw-------. 1 atlas atlas      4413 Apr 20 06:38 pilotlog.txt
2025-04-20 06:38:17 (28872): Guest Log: -rw-------. 1 atlas atlas    985638 Apr 20 06:38 log.44075483._087712.job.log.1
2025-04-20 06:38:17 (28872): Guest Log: -rw-------. 1 atlas atlas       357 Apr 20 06:38 output.list
2025-04-20 06:38:17 (28872): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 20 06:38 runtime_log
2025-04-20 06:38:17 (28872): Guest Log: -rw-------. 1 atlas atlas   1361920 Apr 20 06:38 result.tar.gz
2025-04-20 06:38:17 (28872): Guest Log: -rw-------. 1 atlas atlas       655 Apr 20 06:38 Ut1KDmUeTQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm9niLDm1CxoCn.diag
2025-04-20 06:38:17 (28872): Guest Log: -rw-r--r--. 1 atlas atlas     10930 Apr 20 06:38 runtime_log.err
2025-04-20 06:38:17 (28872): Guest Log: Looking for outputfile HITS.44075483._087712.pool.root.1
2025-04-20 06:38:17 (28872): Guest Log: HITS file was successfully produced
2025-04-20 06:38:17 (28872): Guest Log: -rw-------. 1 atlas atlas 194569718 Apr 20 06:37 /home/atlas/RunAtlas/HITS.44075483._087712.pool.root.1
2025-04-20 06:38:17 (28872): Guest Log: Successfully finished the ATLAS job!
2025-04-20 06:38:17 (28872): Guest Log: Copying the results back to the shared directory!
2025-04-20 06:38:17 (28872): Guest Log:  *** Contents of shared directory: ***
2025-04-20 06:38:17 (28872): Guest Log: total 219608
2025-04-20 06:38:17 (28872): Guest Log: -rw-r--r--. 1 root root 222970259 Apr 20 00:01 ATLAS.root_0
2025-04-20 06:38:17 (28872): Guest Log: -rw-r--r--. 1 root root      7391 Apr 20 00:01 init_data.xml
2025-04-20 06:38:17 (28872): Guest Log: -rw-r--r--. 1 root root    508892 Apr 20 00:01 input.tar.gz
2025-04-20 06:38:17 (28872): Guest Log: -rw-r--r--. 1 root root   1361920 Apr 20 06:38 result.tar.gz
2025-04-20 06:38:17 (28872): Guest Log: -rw-r--r--. 1 root root     17569 Apr 20 00:01 start_atlas.sh
2025-04-20 06:38:17 (28872): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-20 06:38:18 (28872): VM Completion File Detected.
2025-04-20 06:38:18 (28872): Powering off VM.
2025-04-20 06:38:18 (28872): Successfully stopped VM.
2025-04-20 06:38:18 (28872): Deregistering VM. (boinc_b3654b8344017ff5, slot#6)
2025-04-20 06:38:18 (28872): Removing network bandwidth throttle group from VM.
2025-04-20 06:38:19 (28872): Removing VM from VirtualBox.
06:38:24 (28872): called boinc_finish(0)

</stderr_txt>
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