Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
01:15:45 (4081042): wrapper (7.7.26015): starting
01:15:45 (4081042): wrapper: running run_atlas (--nthreads 12)
[2025-04-20 01:15:45] Arguments: --nthreads 12
[2025-04-20 01:15:45] Threads: 12
[2025-04-20 01:15:45] Checking for CVMFS
[2025-04-20 01:15:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-20 01:15:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-20 01:15:47] Running cvmfs_config stat atlas.cern.ch
[2025-04-20 01:15:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-20 01:15:47] 2.12.7.0 3518 31038 303108 145055 3 17 13663177 25165824 917 130560 1 20255766 99.965 2738378 1039 http://cvmfs-s1fnal.opensciencegrid.org/cvmfs/atlas.cern.ch http://141.99.205.200:3128/,DIRECT 1
[2025-04-20 01:15:47] CVMFS is ok
[2025-04-20 01:15:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-20 01:15:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-20 01:15:48] Small home clusters do not require a local http proxy but it is suggested if
[2025-04-20 01:15:48] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-04-20 01:15:48] Further information can be found at the LHC@home message board.
[2025-04-20 01:15:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-20 01:15:48] Checking for apptainer binary...
[2025-04-20 01:15:48] apptainer is not installed, using version from CVMFS
[2025-04-20 01:15:48] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-20 01:15:48] mahler
[2025-04-20 01:15:48] apptainer works
[2025-04-20 01:15:48] Set ATHENA_PROC_NUMBER=12
[2025-04-20 01:15:48] Set ATHENA_CORE_NUMBER=12
[2025-04-20 01:15:48] Starting ATLAS job with PandaID=6608072103
[2025-04-20 01:15:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/nfs/munch_3/home/freudeberg/WLCG/lhc@home/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-20 01:48:58]  *** The last 200 lines of the pilot log: ***
[2025-04-20 01:48:58]  is_altstaged=None
[2025-04-20 01:48:58]  is_tar=False
[2025-04-20 01:48:58]  lfn=log.44075483._087158.job.log.tgz.1
[2025-04-20 01:48:58]  mtime=0
[2025-04-20 01:48:58]  protocol_id=None
[2025-04-20 01:48:58]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-20 01:48:58]  replicas=None
[2025-04-20 01:48:58]  scope=mc23_13p6TeV
[2025-04-20 01:48:58]  status=None
[2025-04-20 01:48:58]  status_code=0
[2025-04-20 01:48:58]  storage_token=
[2025-04-20 01:48:58]  surl=/nfs/munch_3/home/freudeberg/WLCG/lhc@home/slots/0/PanDA_Pilot-6608072103/log.44075483._087158.job.log.tgz.1
[2025-04-20 01:48:58]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9a/e9/log.44075483._087158.job.log.tgz.1
[2025-04-20 01:48:58]  workdir=None
[2025-04-20 01:48:58] ]
[2025-04-20 01:48:58] 2025-04-19 23:48:31,859 | INFO     | transferring file log.44075483._087158.job.log.tgz.1 from /nfs/munch_3/home/freudeberg/WLCG/lhc@home/slots/0/PanDA_Pilot-6608072103/log.44075483._087158.job.log.tg
[2025-04-20 01:48:58] 2025-04-19 23:48:31,859 | INFO     | executing command: /usr/bin/env mv /nfs/munch_3/home/freudeberg/WLCG/lhc@home/slots/0/PanDA_Pilot-6608072103/log.44075483._087158.job.log.tgz.1 /nfs/munch_3/home/f
[2025-04-20 01:48:58] 2025-04-19 23:48:31,879 | INFO     | adding to output.list: log.44075483._087158.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9a/e9/log.44075483._087158.job.log.tg
[2025-04-20 01:48:58] 2025-04-19 23:48:31,881 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-20 01:48:58] 2025-04-19 23:48:31,881 | INFO     | summary of transferred files:
[2025-04-20 01:48:58] 2025-04-19 23:48:31,881 | INFO     |  -- lfn=log.44075483._087158.job.log.tgz.1, status_code=0, status=transferred
[2025-04-20 01:48:58] 2025-04-19 23:48:31,881 | INFO     | stage-out finished correctly
[2025-04-20 01:48:58] 2025-04-19 23:48:33,395 | WARNING  | process 4091464 can no longer be monitored (due to stat problems) - aborting
[2025-04-20 01:48:58] 2025-04-19 23:48:33,396 | INFO     | using path: /nfs/munch_3/home/freudeberg/WLCG/lhc@home/slots/0/PanDA_Pilot-6608072103/memory_monitor_summary.json (trf name=prmon)
[2025-04-20 01:48:58] 2025-04-19 23:48:33,454 | INFO     | number of running child processes to parent process 4091464: 1
[2025-04-20 01:48:58] 2025-04-19 23:48:33,454 | INFO     | maximum number of monitored processes: 6
[2025-04-20 01:48:58] 2025-04-19 23:48:34,753 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-20 01:48:58] 2025-04-19 23:48:35,348 | INFO     | job 6608072103 has state=finished
[2025-04-20 01:48:58] 2025-04-19 23:48:35,349 | INFO     | preparing for final server update for job 6608072103 in state='finished'
[2025-04-20 01:48:58] 2025-04-19 23:48:35,351 | INFO     | this job has now completed (state=finished)
[2025-04-20 01:48:58] 2025-04-19 23:48:35,351 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-20 01:48:58] 2025-04-19 23:48:35,351 | INFO     | log transfer has been attempted: DONE
[2025-04-20 01:48:58] 2025-04-19 23:48:35,351 | INFO     | job 6608072103 has finished - writing final server update
[2025-04-20 01:48:58] 2025-04-19 23:48:35,352 | INFO     | total number of processed events: 400 (read)
[2025-04-20 01:48:58] 2025-04-19 23:48:35,354 | INFO     | executing command: lscpu
[2025-04-20 01:48:58] 2025-04-19 23:48:35,391 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-20 01:48:58] 2025-04-19 23:48:35,958 | INFO     | monitor loop #153: job 0:6608072103 is in state 'finished'
[2025-04-20 01:48:58] 2025-04-19 23:48:35,958 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 01:48:58] 2025-04-19 23:48:38,461 | INFO     | monitor loop #154: job 0:6608072103 is in state 'finished'
[2025-04-20 01:48:58] 2025-04-19 23:48:38,462 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 01:48:58] 2025-04-19 23:48:38,969 | INFO     | CPU arch script returned: x86-64-v4
[2025-04-20 01:48:58] 2025-04-19 23:48:38,970 | INFO     | using path: /nfs/munch_3/home/freudeberg/WLCG/lhc@home/slots/0/PanDA_Pilot-6608072103/memory_monitor_summary.json (trf name=prmon)
[2025-04-20 01:48:58] 2025-04-19 23:48:38,972 | INFO     | extracted standard info from prmon json
[2025-04-20 01:48:58] 2025-04-19 23:48:38,972 | INFO     | extracted standard memory fields from prmon json
[2025-04-20 01:48:58] 2025-04-19 23:48:38,972 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-20 01:48:58] 2025-04-19 23:48:38,972 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-20 01:48:58] 2025-04-19 23:48:38,973 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-20 01:48:58] 2025-04-19 23:48:38,975 | INFO     | fitting pss+swap vs Time
[2025-04-20 01:48:58] 2025-04-19 23:48:38,976 | INFO     | sum of square deviations: 4837300.0
[2025-04-20 01:48:58] 2025-04-19 23:48:38,976 | INFO     | sum of deviations: 4624681023.0
[2025-04-20 01:48:58] 2025-04-19 23:48:38,976 | INFO     | mean x: 1745105619.0
[2025-04-20 01:48:58] 2025-04-19 23:48:38,976 | INFO     | mean y: 2645282.0
[2025-04-20 01:48:58] 2025-04-19 23:48:38,976 | INFO     | -- intersect: -1668398495709.8691
[2025-04-20 01:48:58] 2025-04-19 23:48:38,977 | INFO     | intersect: -1668398495709.8691
[2025-04-20 01:48:58] 2025-04-19 23:48:38,977 | INFO     | chi2: 0.9737963002867736
[2025-04-20 01:48:58] 2025-04-19 23:48:38,977 | INFO     | -- intersect: -1668398495709.8691
[2025-04-20 01:48:58] 2025-04-19 23:48:38,977 | INFO     | current memory leak: 956.05 B/s (using 25 data points, chi2=0.97)
[2025-04-20 01:48:58] 2025-04-19 23:48:38,979 | INFO     | ..............................
[2025-04-20 01:48:58] 2025-04-19 23:48:38,979 | INFO     | . Timing measurements:
[2025-04-20 01:48:58] 2025-04-19 23:48:38,979 | INFO     | . get job = 0 s
[2025-04-20 01:48:58] 2025-04-19 23:48:38,979 | INFO     | . initial setup = 1 s
[2025-04-20 01:48:58] 2025-04-19 23:48:38,979 | INFO     | . payload setup = 5 s
[2025-04-20 01:48:58] 2025-04-19 23:48:38,979 | INFO     | . stage-in = 0 s
[2025-04-20 01:48:58] 2025-04-19 23:48:38,979 | INFO     | . payload execution = 1928 s
[2025-04-20 01:48:58] 2025-04-19 23:48:38,980 | INFO     | . stage-out = 2 s
[2025-04-20 01:48:58] 2025-04-19 23:48:38,980 | INFO     | . log creation = 0 s
[2025-04-20 01:48:58] 2025-04-19 23:48:38,980 | INFO     | ..............................
[2025-04-20 01:48:58] 2025-04-19 23:48:39,366 | INFO     | 
[2025-04-20 01:48:58] 2025-04-19 23:48:39,367 | INFO     | job summary report
[2025-04-20 01:48:58] 2025-04-19 23:48:39,367 | INFO     | --------------------------------------------------
[2025-04-20 01:48:58] 2025-04-19 23:48:39,367 | INFO     | PanDA job id: 6608072103
[2025-04-20 01:48:58] 2025-04-19 23:48:39,367 | INFO     | task id: 44075483
[2025-04-20 01:48:58] 2025-04-19 23:48:39,368 | INFO     | errors: (none)
[2025-04-20 01:48:58] 2025-04-19 23:48:39,368 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-20 01:48:58] 2025-04-19 23:48:39,368 | INFO     | pilot state: finished 
[2025-04-20 01:48:58] 2025-04-19 23:48:39,368 | INFO     | transexitcode: 0
[2025-04-20 01:48:58] 2025-04-19 23:48:39,368 | INFO     | exeerrorcode: 0
[2025-04-20 01:48:58] 2025-04-19 23:48:39,368 | INFO     | exeerrordiag: 
[2025-04-20 01:48:58] 2025-04-19 23:48:39,368 | INFO     | exitcode: 0
[2025-04-20 01:48:58] 2025-04-19 23:48:39,369 | INFO     | exitmsg: OK
[2025-04-20 01:48:58] 2025-04-19 23:48:39,369 | INFO     | cpuconsumptiontime: 14728 s
[2025-04-20 01:48:58] 2025-04-19 23:48:39,369 | INFO     | nevents: 400
[2025-04-20 01:48:58] 2025-04-19 23:48:39,369 | INFO     | neventsw: 0
[2025-04-20 01:48:58] 2025-04-19 23:48:39,369 | INFO     | pid: 4091464
[2025-04-20 01:48:58] 2025-04-19 23:48:39,369 | INFO     | pgrp: 4091464
[2025-04-20 01:48:58] 2025-04-19 23:48:39,370 | INFO     | corecount: 12
[2025-04-20 01:48:58] 2025-04-19 23:48:39,370 | INFO     | event service: False
[2025-04-20 01:48:58] 2025-04-19 23:48:39,370 | INFO     | sizes: {0: 2426852, 4: 2427058, 11: 2427086, 1936: 2451970, 1939: 2460967, 1942: 2461023, 1946: 2461321}
[2025-04-20 01:48:58] 2025-04-19 23:48:39,370 | INFO     | --------------------------------------------------
[2025-04-20 01:48:58] 2025-04-19 23:48:39,370 | INFO     | 
[2025-04-20 01:48:58] 2025-04-19 23:48:39,371 | INFO     | executing command: ls -lF /nfs/munch_3/home/freudeberg/WLCG/lhc@home/slots/0
[2025-04-20 01:48:58] 2025-04-19 23:48:39,392 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-20 01:48:58] 2025-04-19 23:48:39,392 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-20 01:48:58] 2025-04-19 23:48:39,392 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-20 01:48:58] 2025-04-19 23:48:39,393 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-20 01:48:58] 2025-04-19 23:48:39,393 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-20 01:48:58] 2025-04-19 23:48:39,393 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-20 01:48:58] 2025-04-19 23:48:39,393 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-20 01:48:58] 2025-04-19 23:48:39,393 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-20 01:48:58] 2025-04-19 23:48:39,393 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-20 01:48:58] 2025-04-19 23:48:39,394 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-20 01:48:58] 2025-04-19 23:48:39,394 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-20 01:48:58] 2025-04-19 23:48:39,394 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-20 01:48:58] 2025-04-19 23:48:39,394 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-20 01:48:58] 2025-04-19 23:48:39,394 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-20 01:48:58] 2025-04-19 23:48:39,394 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-20 01:48:58] 2025-04-19 23:48:39,395 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-20 01:48:58] 2025-04-19 23:48:39,395 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-20 01:48:58] 2025-04-19 23:48:39,395 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-20 01:48:58] 2025-04-19 23:48:39,395 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-20 01:48:58] 2025-04-19 23:48:39,395 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-20 01:48:58] 2025-04-19 23:48:39,395 | INFO     | job 6608072103 has completed (purged errors)
[2025-04-20 01:48:58] 2025-04-19 23:48:39,396 | INFO     | overall cleanup function is called
[2025-04-20 01:48:58] 2025-04-19 23:48:40,414 | INFO     | --- collectZombieJob: --- 10, [4091464]
[2025-04-20 01:48:58] 2025-04-19 23:48:40,415 | INFO     | zombie collector waiting for pid 4091464
[2025-04-20 01:48:58] 2025-04-19 23:48:40,415 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-20 01:48:58] 2025-04-19 23:48:40,415 | INFO     | collected zombie processes
[2025-04-20 01:48:58] 2025-04-19 23:48:40,415 | INFO     | will attempt to kill all subprocesses of pid=4091464
[2025-04-20 01:48:58] 2025-04-19 23:48:40,472 | INFO     | process IDs to be killed: [4091464] (in reverse order)
[2025-04-20 01:48:58] 2025-04-19 23:48:40,518 | WARNING  | found no corresponding commands to process id(s)
[2025-04-20 01:48:58] 2025-04-19 23:48:40,518 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-20 01:48:58] 2025-04-19 23:48:40,522 | INFO     | did not find any defunct processes belonging to 4091464
[2025-04-20 01:48:58] 2025-04-19 23:48:40,526 | INFO     | did not find any defunct processes belonging to 4091464
[2025-04-20 01:48:58] 2025-04-19 23:48:40,527 | INFO     | ready for new job
[2025-04-20 01:48:58] 2025-04-19 23:48:40,527 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-20 01:48:58] 2025-04-19 23:48:40,529 | INFO     | **************************************
[2025-04-20 01:48:58] 2025-04-19 23:48:40,529 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-20 01:48:58] 2025-04-19 23:48:40,529 | INFO     | **************************************
[2025-04-20 01:48:58] 2025-04-19 23:48:40,529 | INFO     | 
[2025-04-20 01:48:58] 2025-04-19 23:48:40,530 | INFO     | architecture information:
[2025-04-20 01:48:58] 2025-04-19 23:48:40,530 | INFO     | executing command: cat /etc/os-release
[2025-04-20 01:48:58] 2025-04-19 23:48:40,542 | INFO     | cat /etc/os-release:
[2025-04-20 01:48:58] NAME="CentOS Linux"
[2025-04-20 01:48:58] VERSION="7 (Core)"
[2025-04-20 01:48:58] ID="centos"
[2025-04-20 01:48:58] ID_LIKE="rhel fedora"
[2025-04-20 01:48:58] VERSION_ID="7"
[2025-04-20 01:48:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-20 01:48:58] ANSI_COLOR="0;31"
[2025-04-20 01:48:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-20 01:48:58] HOME_URL="https://www.centos.org/"
[2025-04-20 01:48:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-20 01:48:58] 
[2025-04-20 01:48:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-20 01:48:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-20 01:48:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-20 01:48:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-20 01:48:58] 
[2025-04-20 01:48:58] 2025-04-19 23:48:40,543 | INFO     | **************************************
[2025-04-20 01:48:58] 2025-04-19 23:48:41,046 | INFO     | executing command: df -mP /nfs/munch_3/home/freudeberg/WLCG/lhc@home/slots/0
[2025-04-20 01:48:58] 2025-04-19 23:48:41,063 | INFO     | sufficient remaining disk space (387864068096 B)
[2025-04-20 01:48:58] 2025-04-19 23:48:41,063 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-20 01:48:58] 2025-04-19 23:48:41,063 | INFO     | current server update state: UPDATING_FINAL
[2025-04-20 01:48:58] 2025-04-19 23:48:41,064 | INFO     | update_server=False
[2025-04-20 01:48:58] 2025-04-19 23:48:41,064 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-20 01:48:58] 2025-04-19 23:48:41,064 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-20 01:48:58] 2025-04-19 23:48:41,125 | INFO     | all job control threads have been joined
[2025-04-20 01:48:58] 2025-04-19 23:48:41,585 | INFO     | found 0 job(s) in 20 queues
[2025-04-20 01:48:58] 2025-04-19 23:48:41,585 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-20 01:48:58] 2025-04-19 23:48:41,586 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-20 01:48:58] 2025-04-19 23:48:41,586 | INFO     | all payload control threads have been joined
[2025-04-20 01:48:58] 2025-04-19 23:48:41,683 | INFO     | all data control threads have been joined
[2025-04-20 01:48:58] 2025-04-19 23:48:41,970 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-20 01:48:58] 2025-04-19 23:48:41,971 | INFO     | aborting loop
[2025-04-20 01:48:58] 2025-04-19 23:48:42,069 | INFO     | [job] retrieve thread has finished
[2025-04-20 01:48:58] 2025-04-19 23:48:42,131 | INFO     | [job] control thread has finished
[2025-04-20 01:48:58] 2025-04-19 23:48:42,431 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-20 01:48:58] 2025-04-19 23:48:42,515 | INFO     | [payload] failed_post thread has finished
[2025-04-20 01:48:58] 2025-04-19 23:48:42,587 | INFO     | [payload] execute_payloads thread has finished
[2025-04-20 01:48:58] 2025-04-19 23:48:42,592 | INFO     | [payload] control thread has finished
[2025-04-20 01:48:58] 2025-04-19 23:48:42,689 | INFO     | [data] control thread has finished
[2025-04-20 01:48:58] 2025-04-19 23:48:42,746 | INFO     | [data] copytool_in thread has finished
[2025-04-20 01:48:58] 2025-04-19 23:48:42,976 | INFO     | [job] job monitor thread has finished
[2025-04-20 01:48:58] 2025-04-19 23:48:43,253 | INFO     | [job] validate thread has finished
[2025-04-20 01:48:58] 2025-04-19 23:48:43,377 | INFO     | [job] create_data_payload thread has finished
[2025-04-20 01:48:58] 2025-04-19 23:48:43,434 | INFO     | [payload] validate_post thread has finished
[2025-04-20 01:48:58] 2025-04-19 23:48:43,570 | INFO     | [payload] validate_pre thread has finished
[2025-04-20 01:48:58] 2025-04-19 23:48:44,028 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-20 01:48:58] 2025-04-19 23:48:44,436 | INFO     | [data] copytool_out thread has finished
[2025-04-20 01:48:58] 2025-04-19 23:48:45,033 | INFO     | [job] queue monitor thread has finished
[2025-04-20 01:48:58] 2025-04-19 23:48:45,070 | INFO     | [data] queue_monitor thread has finished
[2025-04-20 01:48:58] 2025-04-19 23:48:51,462 | INFO     | job.realtimelogging is not enabled
[2025-04-20 01:48:58] 2025-04-19 23:48:52,468 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-20 01:48:58] 2025-04-19 23:48:53,519 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139675365951296)>', '<ExcThread(monitor, started 139674861422336)>']
[2025-04-20 01:48:58] 2025-04-19 23:48:53,643 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-20 01:48:58] 2025-04-19 23:48:53,644 | INFO     | [monitor] control thread has ended
[2025-04-20 01:48:58] 2025-04-19 23:48:58,544 | INFO     | all workflow threads have been joined
[2025-04-20 01:48:58] 2025-04-19 23:48:58,545 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-20 01:48:58] 2025-04-19 23:48:58,545 | INFO     | traces error code: 0
[2025-04-20 01:48:58] 2025-04-19 23:48:58,546 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-20 01:48:58] 2025-04-19 23:48:58,595 [wrapper] ==== pilot stdout END ====
[2025-04-20 01:48:58] 2025-04-19 23:48:58,599 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-20 01:48:58] 2025-04-19 23:48:58,603 [wrapper] pilotpid: 4084794
[2025-04-20 01:48:58] 2025-04-19 23:48:58,606 [wrapper] Pilot exit status: 0
[2025-04-20 01:48:58] 2025-04-19 23:48:58,617 [wrapper] pandaids: 6608072103
[2025-04-20 01:48:58] 2025-04-19 23:48:58,642 [wrapper] cleanup supervisor_pilot 4121112 4084795
[2025-04-20 01:48:58] 2025-04-19 23:48:58,646 [wrapper] Test setup, not cleaning
[2025-04-20 01:48:58] 2025-04-19 23:48:58,649 [wrapper] apfmon messages muted
[2025-04-20 01:48:58] 2025-04-19 23:48:58,653 [wrapper] ==== wrapper stdout END ====
[2025-04-20 01:48:58] 2025-04-19 23:48:58,656 [wrapper] ==== wrapper stderr END ====
[2025-04-20 01:48:58]  *** Error codes and diagnostics ***
[2025-04-20 01:48:58]     "exeErrorCode": 0,
[2025-04-20 01:48:58]     "exeErrorDiag": "",
[2025-04-20 01:48:58]     "pilotErrorCode": 0,
[2025-04-20 01:48:58]     "pilotErrorDiag": "",
[2025-04-20 01:48:58]  *** Listing of results directory ***
[2025-04-20 01:48:58] total 419088
[2025-04-20 01:48:58] -rw-r--r-- 1 freudeberg freudeberg    495897 Apr 19 20:50 pilot3.tar.gz
[2025-04-20 01:48:58] -rw-r--r-- 1 freudeberg freudeberg      5111 Apr 19 21:06 queuedata.json
[2025-04-20 01:48:58] -rwx------ 1 freudeberg freudeberg     37140 Apr 19 21:09 runpilot2-wrapper.sh
[2025-04-20 01:48:58] -rw-r--r-- 1 freudeberg freudeberg       100 Apr 20 01:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-20 01:48:58] -rwxr-xr-x 1 freudeberg freudeberg      7986 Apr 20 01:15 run_atlas
[2025-04-20 01:48:58] -rw-r--r-- 1 freudeberg freudeberg       105 Apr 20 01:15 job.xml
[2025-04-20 01:48:58] -rw-r--r-- 1 freudeberg freudeberg     17569 Apr 20 01:15 start_atlas.sh
[2025-04-20 01:48:58] drwxrwx--x 1 freudeberg freudeberg      4096 Apr 20 01:15 shared
[2025-04-20 01:48:58] -rw-r--r-- 1 freudeberg freudeberg    508894 Apr 20 01:15 input.tar.gz
[2025-04-20 01:48:58] -rw-r--r-- 1 freudeberg freudeberg      9620 Apr 20 01:15 init_data.xml
[2025-04-20 01:48:58] -rw-r--r-- 1 freudeberg freudeberg 226838215 Apr 20 01:15 EVNT.44075481._003399.pool.root.1
[2025-04-20 01:48:58] -rw-r--r-- 1 freudeberg freudeberg         0 Apr 20 01:15 boinc_setup_complete
[2025-04-20 01:48:58] -rw-r--r-- 1 freudeberg freudeberg         0 Apr 20 01:15 boinc_lockfile
[2025-04-20 01:48:58] -rw------- 1 freudeberg freudeberg       424 Apr 20 01:15 setup.sh.local
[2025-04-20 01:48:58] -rw-r--r-- 1 freudeberg freudeberg      2579 Apr 20 01:15 pandaJob.out
[2025-04-20 01:48:58] -rw------- 1 freudeberg freudeberg    991300 Apr 20 01:15 agis_schedconf.cvmfs.json
[2025-04-20 01:48:58] -rw------- 1 freudeberg freudeberg   1618536 Apr 20 01:15 agis_ddmendpoints.agis.ALL.json
[2025-04-20 01:48:58] drwx------ 1 freudeberg freudeberg      4096 Apr 20 01:15 pilot3
[2025-04-20 01:48:58] -rw------- 1 freudeberg freudeberg        95 Apr 20 01:48 pilot_heartbeat.json
[2025-04-20 01:48:58] -rw------- 1 freudeberg freudeberg 197299705 Apr 20 01:48 HITS.44075483._087158.pool.root.1
[2025-04-20 01:48:58] -rw-r--r-- 1 freudeberg freudeberg       529 Apr 20 01:48 boinc_task_state.xml
[2025-04-20 01:48:58] -rw------- 1 freudeberg freudeberg      1013 Apr 20 01:48 memory_monitor_summary.json
[2025-04-20 01:48:58] -rw------- 1 freudeberg freudeberg    332021 Apr 20 01:48 log.44075483._087158.job.log.tgz.1
[2025-04-20 01:48:58] -rw------- 1 freudeberg freudeberg      7620 Apr 20 01:48 heartbeat.json
[2025-04-20 01:48:58] -rw-r--r-- 1 freudeberg freudeberg        27 Apr 20 01:48 wrapper_checkpoint.txt
[2025-04-20 01:48:58] -rw-r--r-- 1 freudeberg freudeberg      8192 Apr 20 01:48 boinc_mmap_file
[2025-04-20 01:48:58] -rw-r--r-- 1 freudeberg freudeberg     21782 Apr 20 01:48 stderr.txt
[2025-04-20 01:48:58] -rw-r--r-- 1 freudeberg freudeberg     11521 Apr 20 01:48 runtime_log.err
[2025-04-20 01:48:58] -rw-r--r-- 1 freudeberg freudeberg       620 Apr 20 01:48 runtime_log
[2025-04-20 01:48:58] -rw------- 1 freudeberg freudeberg    593920 Apr 20 01:48 result.tar.gz
[2025-04-20 01:48:58] -rw------- 1 freudeberg freudeberg      4454 Apr 20 01:48 pilotlog.txt
[2025-04-20 01:48:58] -rw------- 1 freudeberg freudeberg       357 Apr 20 01:48 output.list
[2025-04-20 01:48:58] -rw------- 1 freudeberg freudeberg    240747 Apr 20 01:48 log.44075483._087158.job.log.1
[2025-04-20 01:48:58] -rw------- 1 freudeberg freudeberg       638 Apr 20 01:48 52MKDmBkSQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm5hiLDmGJDbwn.diag
[2025-04-20 01:48:59] HITS file was successfully produced:
[2025-04-20 01:48:59] -rw------- 1 freudeberg freudeberg 197299705 Apr 20 01:48 shared/HITS.pool.root.1
[2025-04-20 01:48:59]  *** Contents of shared directory: ***
[2025-04-20 01:48:59] total 415300
[2025-04-20 01:48:59] -rw-r--r-- 1 freudeberg freudeberg     17569 Apr 20 01:15 start_atlas.sh
[2025-04-20 01:48:59] -rw-r--r-- 1 freudeberg freudeberg    508894 Apr 20 01:15 input.tar.gz
[2025-04-20 01:48:59] -rw-r--r-- 1 freudeberg freudeberg 226838215 Apr 20 01:15 ATLAS.root_0
[2025-04-20 01:48:59] -rw------- 1 freudeberg freudeberg 197299705 Apr 20 01:48 HITS.pool.root.1
[2025-04-20 01:48:59] -rw------- 1 freudeberg freudeberg    593920 Apr 20 01:48 result.tar.gz
01:49:00 (4081042): run_atlas exited; CPU time 14727.978315
01:49:00 (4081042): called boinc_finish(0)

</stderr_txt>
]]>

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