Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
05:50:05 (1800350): wrapper (7.7.26015): starting
05:50:05 (1800350): wrapper: running run_atlas (--nthreads 3)
[2025-04-20 05:50:05] Arguments: --nthreads 3
[2025-04-20 05:50:05] Threads: 3
[2025-04-20 05:50:05] Checking for CVMFS
[2025-04-20 05:50:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-20 05:50:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-20 05:50:05] Running cvmfs_config stat atlas.cern.ch
[2025-04-20 05:50:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-20 05:50:06] 2.9.2.0 2830 6869 71708 145059 0 61 25220182 36864001 0 130560 0 4656361 99.990 1744800 9965 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-04-20 05:50:06] CVMFS is ok
[2025-04-20 05:50:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-20 05:50:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-20 05:50:06] Further information can be found at the LHC@home message board.
[2025-04-20 05:50:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-20 05:50:06] Checking for apptainer binary...
[2025-04-20 05:50:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-20 05:50:06] Running /usr/bin/apptainer --version
[2025-04-20 05:50:06] apptainer version 1.3.6-6.1
[2025-04-20 05:50:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-20 05:50:06] thA389a
[2025-04-20 05:50:06] apptainer works
[2025-04-20 05:50:06] Set ATHENA_PROC_NUMBER=3
[2025-04-20 05:50:06] Set ATHENA_CORE_NUMBER=3
[2025-04-20 05:50:06] Starting ATLAS job with PandaID=6608071904
[2025-04-20 05:50:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-20 07:31:03]  *** The last 200 lines of the pilot log: ***
[2025-04-20 07:31:03]  protocol_id=None
[2025-04-20 07:31:03]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-20 07:31:03]  replicas=None
[2025-04-20 07:31:03]  scope=mc23_13p6TeV
[2025-04-20 07:31:03]  status=None
[2025-04-20 07:31:03]  status_code=0
[2025-04-20 07:31:03]  storage_token=
[2025-04-20 07:31:03]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6608071904/log.44075483._087025.job.log.tgz.1
[2025-04-20 07:31:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7a/09/log.44075483._087025.job.log.tgz.1
[2025-04-20 07:31:03]  workdir=None
[2025-04-20 07:31:03] ]
[2025-04-20 07:31:03] 2025-04-20 05:30:37,818 | INFO     | transferring file log.44075483._087025.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6608071904/log.44075483._087025.job.log.tgz.1 to /local/data/boinc/
[2025-04-20 07:31:03] 2025-04-20 05:30:37,818 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6608071904/log.44075483._087025.job.log.tgz.1 /local/data/boinc/slots/0/log.44075483._0870
[2025-04-20 07:31:03] 2025-04-20 05:30:37,831 | INFO     | adding to output.list: log.44075483._087025.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7a/09/log.44075483._087025.job.log.tg
[2025-04-20 07:31:03] 2025-04-20 05:30:37,831 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-20 07:31:03] 2025-04-20 05:30:37,831 | INFO     | summary of transferred files:
[2025-04-20 07:31:03] 2025-04-20 05:30:37,831 | INFO     |  -- lfn=log.44075483._087025.job.log.tgz.1, status_code=0, status=transferred
[2025-04-20 07:31:03] 2025-04-20 05:30:37,831 | INFO     | stage-out finished correctly
[2025-04-20 07:31:03] 2025-04-20 05:30:38,844 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-20 07:31:03] 2025-04-20 05:30:38,987 | WARNING  | process 1810448 can no longer be monitored (due to stat problems) - aborting
[2025-04-20 07:31:03] 2025-04-20 05:30:38,987 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6608071904/memory_monitor_summary.json (trf name=prmon)
[2025-04-20 07:31:03] 2025-04-20 05:30:39,022 | INFO     | number of running child processes to parent process 1810448: 1
[2025-04-20 07:31:03] 2025-04-20 05:30:39,022 | INFO     | maximum number of monitored processes: 6
[2025-04-20 07:31:03] 2025-04-20 05:30:39,368 | INFO     | PID=1804007 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-20 07:31:03] 2025-04-20 05:30:39,426 | INFO     | job 6608071904 has state=finished
[2025-04-20 07:31:03] 2025-04-20 05:30:39,427 | INFO     | preparing for final server update for job 6608071904 in state='finished'
[2025-04-20 07:31:03] 2025-04-20 05:30:39,427 | INFO     | this job has now completed (state=finished)
[2025-04-20 07:31:03] 2025-04-20 05:30:39,427 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-20 07:31:03] 2025-04-20 05:30:39,427 | INFO     | log transfer has been attempted: DONE
[2025-04-20 07:31:03] 2025-04-20 05:30:39,427 | INFO     | job 6608071904 has finished - writing final server update
[2025-04-20 07:31:03] 2025-04-20 05:30:39,427 | INFO     | total number of processed events: 400 (read)
[2025-04-20 07:31:03] 2025-04-20 05:30:39,428 | INFO     | executing command: lscpu
[2025-04-20 07:31:03] 2025-04-20 05:30:39,444 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-20 07:31:03] 2025-04-20 05:30:41,528 | INFO     | monitor loop #462: job 0:6608071904 is in state 'finished'
[2025-04-20 07:31:03] 2025-04-20 05:30:41,529 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 07:31:03] 2025-04-20 05:30:44,031 | INFO     | monitor loop #463: job 0:6608071904 is in state 'finished'
[2025-04-20 07:31:03] 2025-04-20 05:30:44,032 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 07:31:03] 2025-04-20 05:30:44,542 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-20 07:31:03] 2025-04-20 05:30:44,542 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6608071904/memory_monitor_summary.json (trf name=prmon)
[2025-04-20 07:31:03] 2025-04-20 05:30:44,543 | INFO     | extracted standard info from prmon json
[2025-04-20 07:31:03] 2025-04-20 05:30:44,543 | INFO     | extracted standard memory fields from prmon json
[2025-04-20 07:31:03] 2025-04-20 05:30:44,543 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-20 07:31:03] 2025-04-20 05:30:44,543 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-20 07:31:03] 2025-04-20 05:30:44,543 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-20 07:31:03] 2025-04-20 05:30:44,544 | INFO     | fitting pss+swap vs Time
[2025-04-20 07:31:03] 2025-04-20 05:30:44,544 | INFO     | sum of square deviations: 241429643.0
[2025-04-20 07:31:03] 2025-04-20 05:30:44,544 | INFO     | sum of deviations: -2376032899.0
[2025-04-20 07:31:03] 2025-04-20 05:30:44,544 | INFO     | mean x: 1745124121.5
[2025-04-20 07:31:03] 2025-04-20 05:30:44,544 | INFO     | mean y: 2434983.804347826
[2025-04-20 07:31:03] 2025-04-20 05:30:44,544 | INFO     | -- intersect: 17177096197.723606
[2025-04-20 07:31:03] 2025-04-20 05:30:44,544 | INFO     | intersect: 17177096197.723606
[2025-04-20 07:31:03] 2025-04-20 05:30:44,544 | INFO     | chi2: 1.6319644482779763
[2025-04-20 07:31:03] 2025-04-20 05:30:44,544 | INFO     | -- intersect: 17177096197.723606
[2025-04-20 07:31:03] 2025-04-20 05:30:44,544 | INFO     | current memory leak: -9.84 B/s (using 92 data points, chi2=1.63)
[2025-04-20 07:31:03] 2025-04-20 05:30:44,544 | INFO     | ..............................
[2025-04-20 07:31:03] 2025-04-20 05:30:44,544 | INFO     | . Timing measurements:
[2025-04-20 07:31:03] 2025-04-20 05:30:44,545 | INFO     | . get job = 0 s
[2025-04-20 07:31:03] 2025-04-20 05:30:44,545 | INFO     | . initial setup = 1 s
[2025-04-20 07:31:03] 2025-04-20 05:30:44,545 | INFO     | . payload setup = 5 s
[2025-04-20 07:31:03] 2025-04-20 05:30:44,545 | INFO     | . stage-in = 0 s
[2025-04-20 07:31:03] 2025-04-20 05:30:44,545 | INFO     | . payload execution = 5999 s
[2025-04-20 07:31:03] 2025-04-20 05:30:44,545 | INFO     | . stage-out = 0 s
[2025-04-20 07:31:03] 2025-04-20 05:30:44,545 | INFO     | . log creation = 0 s
[2025-04-20 07:31:03] 2025-04-20 05:30:44,545 | INFO     | ..............................
[2025-04-20 07:31:03] 2025-04-20 05:30:44,577 | INFO     | 
[2025-04-20 07:31:03] 2025-04-20 05:30:44,577 | INFO     | job summary report
[2025-04-20 07:31:03] 2025-04-20 05:30:44,577 | INFO     | --------------------------------------------------
[2025-04-20 07:31:03] 2025-04-20 05:30:44,577 | INFO     | PanDA job id: 6608071904
[2025-04-20 07:31:03] 2025-04-20 05:30:44,577 | INFO     | task id: 44075483
[2025-04-20 07:31:03] 2025-04-20 05:30:44,577 | INFO     | errors: (none)
[2025-04-20 07:31:03] 2025-04-20 05:30:44,577 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-20 07:31:03] 2025-04-20 05:30:44,577 | INFO     | pilot state: finished 
[2025-04-20 07:31:03] 2025-04-20 05:30:44,577 | INFO     | transexitcode: 0
[2025-04-20 07:31:03] 2025-04-20 05:30:44,577 | INFO     | exeerrorcode: 0
[2025-04-20 07:31:03] 2025-04-20 05:30:44,577 | INFO     | exeerrordiag: 
[2025-04-20 07:31:03] 2025-04-20 05:30:44,577 | INFO     | exitcode: 0
[2025-04-20 07:31:03] 2025-04-20 05:30:44,577 | INFO     | exitmsg: OK
[2025-04-20 07:31:03] 2025-04-20 05:30:44,577 | INFO     | cpuconsumptiontime: 16089 s
[2025-04-20 07:31:03] 2025-04-20 05:30:44,577 | INFO     | nevents: 400
[2025-04-20 07:31:03] 2025-04-20 05:30:44,577 | INFO     | neventsw: 0
[2025-04-20 07:31:03] 2025-04-20 05:30:44,577 | INFO     | pid: 1810448
[2025-04-20 07:31:03] 2025-04-20 05:30:44,577 | INFO     | pgrp: 1810448
[2025-04-20 07:31:03] 2025-04-20 05:30:44,577 | INFO     | corecount: 3
[2025-04-20 07:31:03] 2025-04-20 05:30:44,577 | INFO     | event service: False
[2025-04-20 07:31:03] 2025-04-20 05:30:44,577 | INFO     | sizes: {0: 2426774, 5: 2426980, 11: 2427036, 6005: 2453759, 6006: 2462706, 6007: 2462762, 6012: 2463060}
[2025-04-20 07:31:03] 2025-04-20 05:30:44,577 | INFO     | --------------------------------------------------
[2025-04-20 07:31:03] 2025-04-20 05:30:44,577 | INFO     | 
[2025-04-20 07:31:03] 2025-04-20 05:30:44,578 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-04-20 07:31:03] 2025-04-20 05:30:44,589 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-20 07:31:03] 2025-04-20 05:30:44,589 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-20 07:31:03] 2025-04-20 05:30:44,589 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-20 07:31:03] 2025-04-20 05:30:44,589 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-20 07:31:03] 2025-04-20 05:30:44,589 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-20 07:31:03] 2025-04-20 05:30:44,589 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-20 07:31:03] 2025-04-20 05:30:44,589 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-20 07:31:03] 2025-04-20 05:30:44,590 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-20 07:31:03] 2025-04-20 05:30:44,590 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-20 07:31:03] 2025-04-20 05:30:44,590 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-20 07:31:03] 2025-04-20 05:30:44,590 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-20 07:31:03] 2025-04-20 05:30:44,590 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-20 07:31:03] 2025-04-20 05:30:44,590 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-20 07:31:03] 2025-04-20 05:30:44,590 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-20 07:31:03] 2025-04-20 05:30:44,590 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-20 07:31:03] 2025-04-20 05:30:44,590 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-20 07:31:03] 2025-04-20 05:30:44,590 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-20 07:31:03] 2025-04-20 05:30:44,590 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-20 07:31:03] 2025-04-20 05:30:44,590 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-20 07:31:03] 2025-04-20 05:30:44,590 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-20 07:31:03] 2025-04-20 05:30:44,590 | INFO     | job 6608071904 has completed (purged errors)
[2025-04-20 07:31:03] 2025-04-20 05:30:44,590 | INFO     | overall cleanup function is called
[2025-04-20 07:31:03] 2025-04-20 05:30:45,596 | INFO     | --- collectZombieJob: --- 10, [1810448]
[2025-04-20 07:31:03] 2025-04-20 05:30:45,597 | INFO     | zombie collector waiting for pid 1810448
[2025-04-20 07:31:03] 2025-04-20 05:30:45,597 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-20 07:31:03] 2025-04-20 05:30:45,597 | INFO     | collected zombie processes
[2025-04-20 07:31:03] 2025-04-20 05:30:45,597 | INFO     | will attempt to kill all subprocesses of pid=1810448
[2025-04-20 07:31:03] 2025-04-20 05:30:45,637 | INFO     | process IDs to be killed: [1810448] (in reverse order)
[2025-04-20 07:31:03] 2025-04-20 05:30:45,663 | WARNING  | found no corresponding commands to process id(s)
[2025-04-20 07:31:03] 2025-04-20 05:30:45,664 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-20 07:31:03] 2025-04-20 05:30:45,665 | INFO     | did not find any defunct processes belonging to 1810448
[2025-04-20 07:31:03] 2025-04-20 05:30:45,665 | INFO     | did not find any defunct processes belonging to 1810448
[2025-04-20 07:31:03] 2025-04-20 05:30:45,666 | INFO     | ready for new job
[2025-04-20 07:31:03] 2025-04-20 05:30:45,666 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-20 07:31:03] 2025-04-20 05:30:45,666 | INFO     | **************************************
[2025-04-20 07:31:03] 2025-04-20 05:30:45,666 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-20 07:31:03] 2025-04-20 05:30:45,666 | INFO     | **************************************
[2025-04-20 07:31:03] 2025-04-20 05:30:45,666 | INFO     | 
[2025-04-20 07:31:03] 2025-04-20 05:30:45,667 | INFO     | architecture information:
[2025-04-20 07:31:03] 2025-04-20 05:30:45,667 | INFO     | executing command: cat /etc/os-release
[2025-04-20 07:31:03] 2025-04-20 05:30:45,678 | INFO     | cat /etc/os-release:
[2025-04-20 07:31:03] NAME="CentOS Linux"
[2025-04-20 07:31:03] VERSION="7 (Core)"
[2025-04-20 07:31:03] ID="centos"
[2025-04-20 07:31:03] ID_LIKE="rhel fedora"
[2025-04-20 07:31:03] VERSION_ID="7"
[2025-04-20 07:31:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-20 07:31:03] ANSI_COLOR="0;31"
[2025-04-20 07:31:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-20 07:31:03] HOME_URL="https://www.centos.org/"
[2025-04-20 07:31:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-20 07:31:03] 
[2025-04-20 07:31:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-20 07:31:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-20 07:31:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-20 07:31:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-20 07:31:03] 
[2025-04-20 07:31:03] 2025-04-20 05:30:45,678 | INFO     | **************************************
[2025-04-20 07:31:03] 2025-04-20 05:30:46,181 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-04-20 07:31:03] 2025-04-20 05:30:46,194 | INFO     | sufficient remaining disk space (230510559232 B)
[2025-04-20 07:31:03] 2025-04-20 05:30:46,194 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-20 07:31:03] 2025-04-20 05:30:46,194 | INFO     | current server update state: UPDATING_FINAL
[2025-04-20 07:31:03] 2025-04-20 05:30:46,194 | INFO     | update_server=False
[2025-04-20 07:31:03] 2025-04-20 05:30:46,194 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-20 07:31:03] 2025-04-20 05:30:46,195 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-20 07:31:03] 2025-04-20 05:30:46,195 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-20 07:31:03] 2025-04-20 05:30:46,195 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-20 07:31:03] 2025-04-20 05:30:46,195 | INFO     | found 0 job(s) in 20 queues
[2025-04-20 07:31:03] 2025-04-20 05:30:46,195 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-20 07:31:03] 2025-04-20 05:30:46,195 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-20 07:31:03] 2025-04-20 05:30:46,535 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-20 07:31:03] 2025-04-20 05:30:46,536 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-20 07:31:03] 2025-04-20 05:30:46,536 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-20 07:31:03] 2025-04-20 05:30:46,536 | INFO     | will abort loop
[2025-04-20 07:31:03] 2025-04-20 05:30:47,200 | INFO     | [job] retrieve thread has finished
[2025-04-20 07:31:03] 2025-04-20 05:30:47,201 | INFO     | [job] queue monitor thread has finished
[2025-04-20 07:31:03] 2025-04-20 05:30:47,244 | INFO     | all data control threads have been joined
[2025-04-20 07:31:03] 2025-04-20 05:30:47,450 | INFO     | [payload] validate_pre thread has finished
[2025-04-20 07:31:03] 2025-04-20 05:30:47,473 | INFO     | [payload] failed_post thread has finished
[2025-04-20 07:31:03] 2025-04-20 05:30:47,483 | INFO     | [job] validate thread has finished
[2025-04-20 07:31:03] 2025-04-20 05:30:47,542 | INFO     | [job] job monitor thread has finished
[2025-04-20 07:31:03] 2025-04-20 05:30:47,628 | INFO     | all payload control threads have been joined
[2025-04-20 07:31:03] 2025-04-20 05:30:47,796 | INFO     | all job control threads have been joined
[2025-04-20 07:31:03] 2025-04-20 05:30:47,996 | INFO     | [payload] validate_post thread has finished
[2025-04-20 07:31:03] 2025-04-20 05:30:48,009 | INFO     | [job] create_data_payload thread has finished
[2025-04-20 07:31:03] 2025-04-20 05:30:48,062 | INFO     | [data] copytool_in thread has finished
[2025-04-20 07:31:03] 2025-04-20 05:30:48,201 | INFO     | [data] copytool_out thread has finished
[2025-04-20 07:31:03] 2025-04-20 05:30:48,245 | INFO     | [data] control thread has finished
[2025-04-20 07:31:03] 2025-04-20 05:30:48,489 | INFO     | [payload] execute_payloads thread has finished
[2025-04-20 07:31:03] 2025-04-20 05:30:48,634 | INFO     | [payload] control thread has finished
[2025-04-20 07:31:03] 2025-04-20 05:30:48,802 | INFO     | [job] control thread has finished
[2025-04-20 07:31:03] 2025-04-20 05:30:49,388 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-20 07:31:03] 2025-04-20 05:30:53,395 | INFO     | [data] queue_monitor thread has finished
[2025-04-20 07:31:03] 2025-04-20 05:30:56,495 | INFO     | job.realtimelogging is not enabled
[2025-04-20 07:31:03] 2025-04-20 05:30:57,501 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-20 07:31:03] 2025-04-20 05:30:58,421 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139847835219776)>', '<ExcThread(monitor, started 139847347988224)>']
[2025-04-20 07:31:03] 2025-04-20 05:30:59,265 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-20 07:31:03] 2025-04-20 05:30:59,266 | INFO     | [monitor] control thread has ended
[2025-04-20 07:31:03] 2025-04-20 05:31:03,447 | INFO     | all workflow threads have been joined
[2025-04-20 07:31:03] 2025-04-20 05:31:03,447 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-20 07:31:03] 2025-04-20 05:31:03,448 | INFO     | traces error code: 0
[2025-04-20 07:31:03] 2025-04-20 05:31:03,448 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-20 07:31:03] 2025-04-20 05:31:03,531 [wrapper] ==== pilot stdout END ====
[2025-04-20 07:31:03] 2025-04-20 05:31:03,535 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-20 07:31:03] 2025-04-20 05:31:03,538 [wrapper] pilotpid: 1804007
[2025-04-20 07:31:03] 2025-04-20 05:31:03,540 [wrapper] Pilot exit status: 0
[2025-04-20 07:31:03] 2025-04-20 05:31:03,549 [wrapper] pandaids: 6608071904
[2025-04-20 07:31:03] 2025-04-20 05:31:03,565 [wrapper] cleanup supervisor_pilot 1822693 1804008
[2025-04-20 07:31:03] 2025-04-20 05:31:03,568 [wrapper] Test setup, not cleaning
[2025-04-20 07:31:03] 2025-04-20 05:31:03,571 [wrapper] apfmon messages muted
[2025-04-20 07:31:03] 2025-04-20 05:31:03,574 [wrapper] ==== wrapper stdout END ====
[2025-04-20 07:31:03] 2025-04-20 05:31:03,576 [wrapper] ==== wrapper stderr END ====
[2025-04-20 07:31:03]  *** Error codes and diagnostics ***
[2025-04-20 07:31:03]     "exeErrorCode": 0,
[2025-04-20 07:31:03]     "exeErrorDiag": "",
[2025-04-20 07:31:03]     "pilotErrorCode": 0,
[2025-04-20 07:31:03]     "pilotErrorDiag": "",
[2025-04-20 07:31:03]  *** Listing of results directory ***
[2025-04-20 07:31:03] total 414536
[2025-04-20 07:31:03] -rw-r--r-- 1 boinc boinc    495897 Apr 19 20:50 pilot3.tar.gz
[2025-04-20 07:31:03] -rw-r--r-- 1 boinc boinc      5111 Apr 19 20:53 queuedata.json
[2025-04-20 07:31:03] -rwx------ 1 boinc boinc     37140 Apr 19 20:56 runpilot2-wrapper.sh
[2025-04-20 07:31:03] -rw-r--r-- 1 boinc boinc       100 Apr 20 05:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-20 07:31:03] -rwxr-xr-x 1 boinc boinc      7986 Apr 20 05:50 run_atlas
[2025-04-20 07:31:03] -rw-r--r-- 1 boinc boinc       105 Apr 20 05:50 job.xml
[2025-04-20 07:31:03] -rw-r--r-- 2 boinc boinc 222325319 Apr 20 05:50 EVNT.44075481._003394.pool.root.1
[2025-04-20 07:31:03] -rw-r--r-- 1 boinc boinc      6680 Apr 20 05:50 init_data.xml
[2025-04-20 07:31:03] drwxrwx--x 2 boinc boinc      4096 Apr 20 05:50 shared
[2025-04-20 07:31:03] -rw-r--r-- 2 boinc boinc    508889 Apr 20 05:50 input.tar.gz
[2025-04-20 07:31:03] -rw-r--r-- 2 boinc boinc     17569 Apr 20 05:50 start_atlas.sh
[2025-04-20 07:31:03] -rw-r--r-- 1 boinc boinc         0 Apr 20 05:50 boinc_lockfile
[2025-04-20 07:31:03] -rw-r--r-- 1 boinc boinc      2577 Apr 20 05:50 pandaJob.out
[2025-04-20 07:31:03] -rw------- 1 boinc boinc       424 Apr 20 05:50 setup.sh.local
[2025-04-20 07:31:03] -rw------- 1 boinc boinc    991300 Apr 20 05:50 agis_schedconf.cvmfs.json
[2025-04-20 07:31:03] -rw------- 1 boinc boinc   1618536 Apr 20 05:50 agis_ddmendpoints.agis.ALL.json
[2025-04-20 07:31:03] drwx------ 4 boinc boinc      4096 Apr 20 05:50 pilot3
[2025-04-20 07:31:03] -rw------- 1 boinc boinc 196688557 Apr 20 07:30 HITS.44075483._087025.pool.root.1
[2025-04-20 07:31:03] -rw-r--r-- 1 boinc boinc       529 Apr 20 07:30 boinc_task_state.xml
[2025-04-20 07:31:03] -rw------- 1 boinc boinc      1023 Apr 20 07:30 memory_monitor_summary.json
[2025-04-20 07:31:03] -rw------- 1 boinc boinc    225530 Apr 20 07:30 log.44075483._087025.job.log.tgz.1
[2025-04-20 07:31:03] -rw------- 1 boinc boinc      7662 Apr 20 07:30 heartbeat.json
[2025-04-20 07:31:03] -rw------- 1 boinc boinc        95 Apr 20 07:30 pilot_heartbeat.json
[2025-04-20 07:31:03] -rw-r--r-- 1 boinc boinc      8192 Apr 20 07:30 boinc_mmap_file
[2025-04-20 07:31:03] -rw-r--r-- 1 boinc boinc        27 Apr 20 07:30 wrapper_checkpoint.txt
[2025-04-20 07:31:03] -rw------- 1 boinc boinc      4738 Apr 20 07:31 pilotlog.txt
[2025-04-20 07:31:03] -rw------- 1 boinc boinc    575344 Apr 20 07:31 log.44075483._087025.job.log.1
[2025-04-20 07:31:03] -rw------- 1 boinc boinc       357 Apr 20 07:31 output.list
[2025-04-20 07:31:03] -rw-r--r-- 1 boinc boinc       620 Apr 20 07:31 runtime_log
[2025-04-20 07:31:03] -rw------- 1 boinc boinc    819200 Apr 20 07:31 result.tar.gz
[2025-04-20 07:31:03] -rw------- 1 boinc boinc       660 Apr 20 07:31 x7ZMDmHXSQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm9fiLDmhZbDem.diag
[2025-04-20 07:31:03] -rw-r--r-- 1 boinc boinc     11104 Apr 20 07:31 runtime_log.err
[2025-04-20 07:31:03] -rw-r--r-- 1 boinc boinc     21813 Apr 20 07:31 stderr.txt
[2025-04-20 07:31:03] HITS file was successfully produced:
[2025-04-20 07:31:03] -rw------- 1 boinc boinc 196688557 Apr 20 07:30 shared/HITS.pool.root.1
[2025-04-20 07:31:03]  *** Contents of shared directory: ***
[2025-04-20 07:31:03] total 410524
[2025-04-20 07:31:03] -rw-r--r-- 2 boinc boinc 222325319 Apr 20 05:50 ATLAS.root_0
[2025-04-20 07:31:03] -rw-r--r-- 2 boinc boinc    508889 Apr 20 05:50 input.tar.gz
[2025-04-20 07:31:03] -rw-r--r-- 2 boinc boinc     17569 Apr 20 05:50 start_atlas.sh
[2025-04-20 07:31:03] -rw------- 1 boinc boinc 196688557 Apr 20 07:30 HITS.pool.root.1
[2025-04-20 07:31:03] -rw------- 1 boinc boinc    819200 Apr 20 07:31 result.tar.gz
07:31:05 (1800350): run_atlas exited; CPU time 16116.830341
07:31:05 (1800350): called boinc_finish(0)

</stderr_txt>
]]>

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