Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
05:45:35 (1551541): wrapper (7.7.26015): starting
05:45:35 (1551541): wrapper: running run_atlas (--nthreads 4)
[2025-04-20 05:45:35] Arguments: --nthreads 4
[2025-04-20 05:45:35] Threads: 4
[2025-04-20 05:45:35] Checking for CVMFS
[2025-04-20 05:45:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-20 05:45:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-20 05:45:36] Running cvmfs_config stat atlas.cern.ch
[2025-04-20 05:45:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-20 05:45:36] 2.9.2.0 1921549 11914 97536 145059 3 187 26571313 36864000 0 130560 0 9666907 99.948 3077341 5149 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-04-20 05:45:36] CVMFS is ok
[2025-04-20 05:45:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-20 05:45:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-20 05:45:36] Further information can be found at the LHC@home message board.
[2025-04-20 05:45:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-20 05:45:36] Checking for apptainer binary...
[2025-04-20 05:45:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-20 05:45:36] Running /usr/bin/apptainer --version
[2025-04-20 05:45:36] apptainer version 1.3.6-6.1
[2025-04-20 05:45:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-20 05:45:36] thA315a
[2025-04-20 05:45:36] apptainer works
[2025-04-20 05:45:36] Set ATHENA_PROC_NUMBER=4
[2025-04-20 05:45:36] Set ATHENA_CORE_NUMBER=4
[2025-04-20 05:45:36] Starting ATLAS job with PandaID=6608071861
[2025-04-20 05:45:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-20 07:05:04]  *** The last 200 lines of the pilot log: ***
[2025-04-20 07:05:04]  filesize=236842
[2025-04-20 07:05:04]  filetype=log
[2025-04-20 07:05:04]  guid=0c56b848-a692-4d91-ab53-de94b7a95686
[2025-04-20 07:05:04]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-20 07:05:04]  is_altstaged=None
[2025-04-20 07:05:04]  is_tar=False
[2025-04-20 07:05:04]  lfn=log.44075483._086982.job.log.tgz.1
[2025-04-20 07:05:04]  mtime=0
[2025-04-20 07:05:04]  protocol_id=None
[2025-04-20 07:05:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-20 07:05:04]  replicas=None
[2025-04-20 07:05:04]  scope=mc23_13p6TeV
[2025-04-20 07:05:04]  status=None
[2025-04-20 07:05:04]  status_code=0
[2025-04-20 07:05:04]  storage_token=
[2025-04-20 07:05:04]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6608071861/log.44075483._086982.job.log.tgz.1
[2025-04-20 07:05:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fe/23/log.44075483._086982.job.log.tgz.1
[2025-04-20 07:05:04]  workdir=None
[2025-04-20 07:05:04] ]
[2025-04-20 07:05:04] 2025-04-20 05:04:38,754 | INFO     | transferring file log.44075483._086982.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6608071861/log.44075483._086982.job.log.tgz.1 to /local/data/boinc/
[2025-04-20 07:05:04] 2025-04-20 05:04:38,754 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6608071861/log.44075483._086982.job.log.tgz.1 /local/data/boinc/slots/0/log.44075483._0869
[2025-04-20 07:05:04] 2025-04-20 05:04:38,772 | INFO     | adding to output.list: log.44075483._086982.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fe/23/log.44075483._086982.job.log.tg
[2025-04-20 07:05:04] 2025-04-20 05:04:38,772 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-20 07:05:04] 2025-04-20 05:04:38,772 | INFO     | summary of transferred files:
[2025-04-20 07:05:04] 2025-04-20 05:04:38,772 | INFO     |  -- lfn=log.44075483._086982.job.log.tgz.1, status_code=0, status=transferred
[2025-04-20 07:05:04] 2025-04-20 05:04:38,772 | INFO     | stage-out finished correctly
[2025-04-20 07:05:04] 2025-04-20 05:04:38,813 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-20 07:05:04] 2025-04-20 05:04:40,586 | INFO     | job 6608071861 has state=finished
[2025-04-20 07:05:04] 2025-04-20 05:04:40,587 | INFO     | preparing for final server update for job 6608071861 in state='finished'
[2025-04-20 07:05:04] 2025-04-20 05:04:40,587 | INFO     | this job has now completed (state=finished)
[2025-04-20 07:05:04] 2025-04-20 05:04:40,587 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-20 07:05:04] 2025-04-20 05:04:40,587 | INFO     | log transfer has been attempted: DONE
[2025-04-20 07:05:04] 2025-04-20 05:04:40,587 | INFO     | job 6608071861 has finished - writing final server update
[2025-04-20 07:05:04] 2025-04-20 05:04:40,587 | INFO     | total number of processed events: 400 (read)
[2025-04-20 07:05:04] 2025-04-20 05:04:40,590 | INFO     | executing command: lscpu
[2025-04-20 07:05:04] 2025-04-20 05:04:40,611 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-20 07:05:04] 2025-04-20 05:04:45,076 | WARNING  | process 1561851 can no longer be monitored (due to stat problems) - aborting
[2025-04-20 07:05:04] 2025-04-20 05:04:45,077 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6608071861/memory_monitor_summary.json (trf name=prmon)
[2025-04-20 07:05:04] 2025-04-20 05:04:45,118 | INFO     | number of running child processes to parent process 1561851: 1
[2025-04-20 07:05:04] 2025-04-20 05:04:45,118 | INFO     | maximum number of monitored processes: 6
[2025-04-20 07:05:04] 2025-04-20 05:04:45,157 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-20 07:05:04] 2025-04-20 05:04:45,157 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6608071861/memory_monitor_summary.json (trf name=prmon)
[2025-04-20 07:05:04] 2025-04-20 05:04:45,157 | INFO     | extracted standard info from prmon json
[2025-04-20 07:05:04] 2025-04-20 05:04:45,157 | INFO     | extracted standard memory fields from prmon json
[2025-04-20 07:05:04] 2025-04-20 05:04:45,157 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-20 07:05:04] 2025-04-20 05:04:45,157 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-20 07:05:04] 2025-04-20 05:04:45,158 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-20 07:05:04] 2025-04-20 05:04:45,158 | INFO     | fitting pss+swap vs Time
[2025-04-20 07:05:04] 2025-04-20 05:04:45,159 | INFO     | sum of square deviations: 110960220.0
[2025-04-20 07:05:04] 2025-04-20 05:04:45,159 | INFO     | sum of deviations: 4613393461.000001
[2025-04-20 07:05:04] 2025-04-20 05:04:45,159 | INFO     | mean x: 1745123206.0
[2025-04-20 07:05:04] 2025-04-20 05:04:45,159 | INFO     | mean y: 2475360.5352112674
[2025-04-20 07:05:04] 2025-04-20 05:04:45,159 | INFO     | -- intersect: -72554518372.89247
[2025-04-20 07:05:04] 2025-04-20 05:04:45,159 | INFO     | intersect: -72554518372.89247
[2025-04-20 07:05:04] 2025-04-20 05:04:45,159 | INFO     | chi2: 1.0866830186848195
[2025-04-20 07:05:04] 2025-04-20 05:04:45,159 | INFO     | -- intersect: -72554518372.89247
[2025-04-20 07:05:04] 2025-04-20 05:04:45,159 | INFO     | current memory leak: 41.58 B/s (using 71 data points, chi2=1.09)
[2025-04-20 07:05:04] 2025-04-20 05:04:45,159 | INFO     | ..............................
[2025-04-20 07:05:04] 2025-04-20 05:04:45,159 | INFO     | . Timing measurements:
[2025-04-20 07:05:04] 2025-04-20 05:04:45,159 | INFO     | . get job = 0 s
[2025-04-20 07:05:04] 2025-04-20 05:04:45,159 | INFO     | . initial setup = 1 s
[2025-04-20 07:05:04] 2025-04-20 05:04:45,159 | INFO     | . payload setup = 4 s
[2025-04-20 07:05:04] 2025-04-20 05:04:45,159 | INFO     | . stage-in = 0 s
[2025-04-20 07:05:04] 2025-04-20 05:04:45,159 | INFO     | . payload execution = 4713 s
[2025-04-20 07:05:04] 2025-04-20 05:04:45,159 | INFO     | . stage-out = 0 s
[2025-04-20 07:05:04] 2025-04-20 05:04:45,159 | INFO     | . log creation = 0 s
[2025-04-20 07:05:04] 2025-04-20 05:04:45,159 | INFO     | ..............................
[2025-04-20 07:05:04] 2025-04-20 05:04:45,200 | INFO     | 
[2025-04-20 07:05:04] 2025-04-20 05:04:45,200 | INFO     | job summary report
[2025-04-20 07:05:04] 2025-04-20 05:04:45,200 | INFO     | --------------------------------------------------
[2025-04-20 07:05:04] 2025-04-20 05:04:45,200 | INFO     | PanDA job id: 6608071861
[2025-04-20 07:05:04] 2025-04-20 05:04:45,200 | INFO     | task id: 44075483
[2025-04-20 07:05:04] 2025-04-20 05:04:45,200 | INFO     | errors: (none)
[2025-04-20 07:05:04] 2025-04-20 05:04:45,200 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-20 07:05:04] 2025-04-20 05:04:45,200 | INFO     | pilot state: finished 
[2025-04-20 07:05:04] 2025-04-20 05:04:45,201 | INFO     | transexitcode: 0
[2025-04-20 07:05:04] 2025-04-20 05:04:45,201 | INFO     | exeerrorcode: 0
[2025-04-20 07:05:04] 2025-04-20 05:04:45,201 | INFO     | exeerrordiag: 
[2025-04-20 07:05:04] 2025-04-20 05:04:45,201 | INFO     | exitcode: 0
[2025-04-20 07:05:04] 2025-04-20 05:04:45,201 | INFO     | exitmsg: OK
[2025-04-20 07:05:04] 2025-04-20 05:04:45,201 | INFO     | cpuconsumptiontime: 16042 s
[2025-04-20 07:05:04] 2025-04-20 05:04:45,201 | INFO     | nevents: 400
[2025-04-20 07:05:04] 2025-04-20 05:04:45,201 | INFO     | neventsw: 0
[2025-04-20 07:05:04] 2025-04-20 05:04:45,201 | INFO     | pid: 1561851
[2025-04-20 07:05:04] 2025-04-20 05:04:45,201 | INFO     | pgrp: 1561851
[2025-04-20 07:05:04] 2025-04-20 05:04:45,201 | INFO     | corecount: 4
[2025-04-20 07:05:04] 2025-04-20 05:04:45,201 | INFO     | event service: False
[2025-04-20 07:05:04] 2025-04-20 05:04:45,201 | INFO     | sizes: {0: 2426662, 1: 2426804, 4: 2427010, 11: 2427038, 4721: 2462191, 4728: 2462305}
[2025-04-20 07:05:04] 2025-04-20 05:04:45,201 | INFO     | --------------------------------------------------
[2025-04-20 07:05:04] 2025-04-20 05:04:45,201 | INFO     | 
[2025-04-20 07:05:04] 2025-04-20 05:04:45,201 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-04-20 07:05:04] 2025-04-20 05:04:45,219 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-20 07:05:04] 2025-04-20 05:04:45,220 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-20 07:05:04] 2025-04-20 05:04:45,220 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-20 07:05:04] 2025-04-20 05:04:45,220 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-20 07:05:04] 2025-04-20 05:04:45,220 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-20 07:05:04] 2025-04-20 05:04:45,220 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-20 07:05:04] 2025-04-20 05:04:45,220 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-20 07:05:04] 2025-04-20 05:04:45,220 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-20 07:05:04] 2025-04-20 05:04:45,220 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-20 07:05:04] 2025-04-20 05:04:45,220 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-20 07:05:04] 2025-04-20 05:04:45,220 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-20 07:05:04] 2025-04-20 05:04:45,220 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-20 07:05:04] 2025-04-20 05:04:45,220 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-20 07:05:04] 2025-04-20 05:04:45,220 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-20 07:05:04] 2025-04-20 05:04:45,220 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-20 07:05:04] 2025-04-20 05:04:45,220 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-20 07:05:04] 2025-04-20 05:04:45,220 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-20 07:05:04] 2025-04-20 05:04:45,220 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-20 07:05:04] 2025-04-20 05:04:45,220 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-20 07:05:04] 2025-04-20 05:04:45,220 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-20 07:05:04] 2025-04-20 05:04:45,220 | INFO     | job 6608071861 has completed (purged errors)
[2025-04-20 07:05:04] 2025-04-20 05:04:45,220 | INFO     | overall cleanup function is called
[2025-04-20 07:05:04] 2025-04-20 05:04:46,225 | INFO     | --- collectZombieJob: --- 10, [1561851]
[2025-04-20 07:05:04] 2025-04-20 05:04:46,225 | INFO     | zombie collector waiting for pid 1561851
[2025-04-20 07:05:04] 2025-04-20 05:04:46,225 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-20 07:05:04] 2025-04-20 05:04:46,225 | INFO     | collected zombie processes
[2025-04-20 07:05:04] 2025-04-20 05:04:46,225 | INFO     | will attempt to kill all subprocesses of pid=1561851
[2025-04-20 07:05:04] 2025-04-20 05:04:46,268 | INFO     | process IDs to be killed: [1561851] (in reverse order)
[2025-04-20 07:05:04] 2025-04-20 05:04:46,300 | WARNING  | found no corresponding commands to process id(s)
[2025-04-20 07:05:04] 2025-04-20 05:04:46,301 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-20 07:05:04] 2025-04-20 05:04:46,302 | INFO     | did not find any defunct processes belonging to 1561851
[2025-04-20 07:05:04] 2025-04-20 05:04:46,304 | INFO     | did not find any defunct processes belonging to 1561851
[2025-04-20 07:05:04] 2025-04-20 05:04:46,304 | INFO     | ready for new job
[2025-04-20 07:05:04] 2025-04-20 05:04:46,304 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-20 07:05:04] 2025-04-20 05:04:46,304 | INFO     | **************************************
[2025-04-20 07:05:04] 2025-04-20 05:04:46,304 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-20 07:05:04] 2025-04-20 05:04:46,305 | INFO     | **************************************
[2025-04-20 07:05:04] 2025-04-20 05:04:46,305 | INFO     | 
[2025-04-20 07:05:04] 2025-04-20 05:04:46,305 | INFO     | architecture information:
[2025-04-20 07:05:04] 2025-04-20 05:04:46,305 | INFO     | executing command: cat /etc/os-release
[2025-04-20 07:05:04] 2025-04-20 05:04:46,318 | INFO     | cat /etc/os-release:
[2025-04-20 07:05:04] NAME="CentOS Linux"
[2025-04-20 07:05:04] VERSION="7 (Core)"
[2025-04-20 07:05:04] ID="centos"
[2025-04-20 07:05:04] ID_LIKE="rhel fedora"
[2025-04-20 07:05:04] VERSION_ID="7"
[2025-04-20 07:05:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-20 07:05:04] ANSI_COLOR="0;31"
[2025-04-20 07:05:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-20 07:05:04] HOME_URL="https://www.centos.org/"
[2025-04-20 07:05:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-20 07:05:04] 
[2025-04-20 07:05:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-20 07:05:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-20 07:05:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-20 07:05:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-20 07:05:04] 
[2025-04-20 07:05:04] 2025-04-20 05:04:46,319 | INFO     | **************************************
[2025-04-20 07:05:04] 2025-04-20 05:04:46,822 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-04-20 07:05:04] 2025-04-20 05:04:46,839 | INFO     | sufficient remaining disk space (228427038720 B)
[2025-04-20 07:05:04] 2025-04-20 05:04:46,839 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-20 07:05:04] 2025-04-20 05:04:46,839 | INFO     | current server update state: UPDATING_FINAL
[2025-04-20 07:05:04] 2025-04-20 05:04:46,839 | INFO     | update_server=False
[2025-04-20 07:05:04] 2025-04-20 05:04:46,839 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-20 07:05:04] 2025-04-20 05:04:46,840 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-20 07:05:04] 2025-04-20 05:04:46,840 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-20 07:05:04] 2025-04-20 05:04:46,840 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-20 07:05:04] 2025-04-20 05:04:46,840 | INFO     | aborting loop
[2025-04-20 07:05:04] 2025-04-20 05:04:46,876 | INFO     | found 0 job(s) in 20 queues
[2025-04-20 07:05:04] 2025-04-20 05:04:46,877 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-20 07:05:04] 2025-04-20 05:04:46,877 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-20 07:05:04] 2025-04-20 05:04:46,942 | INFO     | all payload control threads have been joined
[2025-04-20 07:05:04] 2025-04-20 05:04:47,130 | INFO     | all job control threads have been joined
[2025-04-20 07:05:04] 2025-04-20 05:04:47,478 | INFO     | all data control threads have been joined
[2025-04-20 07:05:04] 2025-04-20 05:04:47,845 | INFO     | [job] retrieve thread has finished
[2025-04-20 07:05:04] 2025-04-20 05:04:47,846 | INFO     | [job] queue monitor thread has finished
[2025-04-20 07:05:04] 2025-04-20 05:04:47,846 | INFO     | [job] job monitor thread has finished
[2025-04-20 07:05:04] 2025-04-20 05:04:47,948 | INFO     | [payload] control thread has finished
[2025-04-20 07:05:04] 2025-04-20 05:04:48,101 | INFO     | [data] copytool_in thread has finished
[2025-04-20 07:05:04] 2025-04-20 05:04:48,136 | INFO     | [job] control thread has finished
[2025-04-20 07:05:04] 2025-04-20 05:04:48,217 | INFO     | [payload] execute_payloads thread has finished
[2025-04-20 07:05:04] 2025-04-20 05:04:48,484 | INFO     | [data] control thread has finished
[2025-04-20 07:05:04] 2025-04-20 05:04:48,488 | INFO     | [payload] failed_post thread has finished
[2025-04-20 07:05:04] 2025-04-20 05:04:48,846 | INFO     | [data] copytool_out thread has finished
[2025-04-20 07:05:04] 2025-04-20 05:04:49,029 | INFO     | [payload] validate_post thread has finished
[2025-04-20 07:05:04] 2025-04-20 05:04:49,059 | INFO     | [job] validate thread has finished
[2025-04-20 07:05:04] 2025-04-20 05:04:49,189 | INFO     | [job] create_data_payload thread has finished
[2025-04-20 07:05:04] 2025-04-20 05:04:49,222 | INFO     | [payload] validate_pre thread has finished
[2025-04-20 07:05:04] 2025-04-20 05:04:49,361 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-20 07:05:04] 2025-04-20 05:04:53,369 | INFO     | [data] queue_monitor thread has finished
[2025-04-20 07:05:04] 2025-04-20 05:04:57,455 | INFO     | job.realtimelogging is not enabled
[2025-04-20 07:05:04] 2025-04-20 05:04:58,461 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-20 07:05:04] 2025-04-20 05:04:59,661 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140121602156352)>', '<ExcThread(monitor, started 140120288130816)>']
[2025-04-20 07:05:04] 2025-04-20 05:04:59,943 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-20 07:05:04] 2025-04-20 05:04:59,944 | INFO     | [monitor] control thread has ended
[2025-04-20 07:05:04] 2025-04-20 05:05:04,687 | INFO     | all workflow threads have been joined
[2025-04-20 07:05:04] 2025-04-20 05:05:04,687 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-20 07:05:04] 2025-04-20 05:05:04,687 | INFO     | traces error code: 0
[2025-04-20 07:05:04] 2025-04-20 05:05:04,687 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-20 07:05:04] 2025-04-20 05:05:04,756 [wrapper] ==== pilot stdout END ====
[2025-04-20 07:05:04] 2025-04-20 05:05:04,761 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-20 07:05:04] 2025-04-20 05:05:04,765 [wrapper] pilotpid: 1555267
[2025-04-20 07:05:04] 2025-04-20 05:05:04,769 [wrapper] Pilot exit status: 0
[2025-04-20 07:05:04] 2025-04-20 05:05:04,780 [wrapper] pandaids: 6608071861
[2025-04-20 07:05:04] 2025-04-20 05:05:04,802 [wrapper] cleanup supervisor_pilot 1574282 1555268
[2025-04-20 07:05:04] 2025-04-20 05:05:04,806 [wrapper] Test setup, not cleaning
[2025-04-20 07:05:04] 2025-04-20 05:05:04,810 [wrapper] apfmon messages muted
[2025-04-20 07:05:04] 2025-04-20 05:05:04,813 [wrapper] ==== wrapper stdout END ====
[2025-04-20 07:05:04] 2025-04-20 05:05:04,817 [wrapper] ==== wrapper stderr END ====
[2025-04-20 07:05:04]  *** Error codes and diagnostics ***
[2025-04-20 07:05:04]     "exeErrorCode": 0,
[2025-04-20 07:05:04]     "exeErrorDiag": "",
[2025-04-20 07:05:04]     "pilotErrorCode": 0,
[2025-04-20 07:05:04]     "pilotErrorDiag": "",
[2025-04-20 07:05:04]  *** Listing of results directory ***
[2025-04-20 07:05:04] total 416212
[2025-04-20 07:05:04] -rw-r--r-- 1 boinc boinc    495897 Apr 19 20:50 pilot3.tar.gz
[2025-04-20 07:05:04] -rw-r--r-- 1 boinc boinc      5111 Apr 19 20:50 queuedata.json
[2025-04-20 07:05:04] -rwx------ 1 boinc boinc     37140 Apr 19 20:50 runpilot2-wrapper.sh
[2025-04-20 07:05:04] -rw-r--r-- 1 boinc boinc       100 Apr 20 05:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-20 07:05:04] -rwxr-xr-x 1 boinc boinc      7986 Apr 20 05:45 run_atlas
[2025-04-20 07:05:04] -rw-r--r-- 1 boinc boinc       105 Apr 20 05:45 job.xml
[2025-04-20 07:05:04] -rw-r--r-- 2 boinc boinc 223932744 Apr 20 05:45 EVNT.44075481._003392.pool.root.1
[2025-04-20 07:05:04] -rw-r--r-- 1 boinc boinc      6854 Apr 20 05:45 init_data.xml
[2025-04-20 07:05:04] drwxrwx--x 2 boinc boinc      4096 Apr 20 05:45 shared
[2025-04-20 07:05:04] -rw-r--r-- 2 boinc boinc    508891 Apr 20 05:45 input.tar.gz
[2025-04-20 07:05:04] -rw-r--r-- 2 boinc boinc     17569 Apr 20 05:45 start_atlas.sh
[2025-04-20 07:05:04] -rw-r--r-- 1 boinc boinc         0 Apr 20 05:45 boinc_lockfile
[2025-04-20 07:05:04] -rw-r--r-- 1 boinc boinc      2578 Apr 20 05:45 pandaJob.out
[2025-04-20 07:05:04] -rw------- 1 boinc boinc       424 Apr 20 05:45 setup.sh.local
[2025-04-20 07:05:04] -rw------- 1 boinc boinc    991300 Apr 20 05:45 agis_schedconf.cvmfs.json
[2025-04-20 07:05:04] -rw------- 1 boinc boinc   1618536 Apr 20 05:45 agis_ddmendpoints.agis.ALL.json
[2025-04-20 07:05:04] drwx------ 4 boinc boinc      4096 Apr 20 05:45 pilot3
[2025-04-20 07:05:04] -rw------- 1 boinc boinc        95 Apr 20 07:04 pilot_heartbeat.json
[2025-04-20 07:05:04] -rw-r--r-- 1 boinc boinc       530 Apr 20 07:04 boinc_task_state.xml
[2025-04-20 07:05:04] -rw------- 1 boinc boinc 197007146 Apr 20 07:04 HITS.44075483._086982.pool.root.1
[2025-04-20 07:05:04] -rw------- 1 boinc boinc      1022 Apr 20 07:04 memory_monitor_summary.json
[2025-04-20 07:05:04] -rw------- 1 boinc boinc    236842 Apr 20 07:04 log.44075483._086982.job.log.tgz.1
[2025-04-20 07:05:04] -rw------- 1 boinc boinc      7664 Apr 20 07:04 heartbeat.json
[2025-04-20 07:05:04] -rw-r--r-- 1 boinc boinc      8192 Apr 20 07:05 boinc_mmap_file
[2025-04-20 07:05:04] -rw-r--r-- 1 boinc boinc        27 Apr 20 07:05 wrapper_checkpoint.txt
[2025-04-20 07:05:04] -rw------- 1 boinc boinc      4429 Apr 20 07:05 pilotlog.txt
[2025-04-20 07:05:04] -rw------- 1 boinc boinc    462072 Apr 20 07:05 log.44075483._086982.job.log.1
[2025-04-20 07:05:04] -rw------- 1 boinc boinc       357 Apr 20 07:05 output.list
[2025-04-20 07:05:04] -rw-r--r-- 1 boinc boinc       620 Apr 20 07:05 runtime_log
[2025-04-20 07:05:04] -rw------- 1 boinc boinc    716800 Apr 20 07:05 result.tar.gz
[2025-04-20 07:05:04] -rw-r--r-- 1 boinc boinc     11104 Apr 20 07:05 runtime_log.err
[2025-04-20 07:05:04] -rw------- 1 boinc boinc       659 Apr 20 07:05 WhaNDmDSSQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmdfiLDmRDgHQm.diag
[2025-04-20 07:05:04] -rw-r--r-- 1 boinc boinc     21079 Apr 20 07:05 stderr.txt
[2025-04-20 07:05:04] HITS file was successfully produced:
[2025-04-20 07:05:04] -rw------- 1 boinc boinc 197007146 Apr 20 07:04 shared/HITS.pool.root.1
[2025-04-20 07:05:04]  *** Contents of shared directory: ***
[2025-04-20 07:05:04] total 412304
[2025-04-20 07:05:04] -rw-r--r-- 2 boinc boinc 223932744 Apr 20 05:45 ATLAS.root_0
[2025-04-20 07:05:04] -rw-r--r-- 2 boinc boinc    508891 Apr 20 05:45 input.tar.gz
[2025-04-20 07:05:04] -rw-r--r-- 2 boinc boinc     17569 Apr 20 05:45 start_atlas.sh
[2025-04-20 07:05:04] -rw------- 1 boinc boinc 197007146 Apr 20 07:04 HITS.pool.root.1
[2025-04-20 07:05:04] -rw------- 1 boinc boinc    716800 Apr 20 07:05 result.tar.gz
07:05:06 (1551541): run_atlas exited; CPU time 16057.373860
07:05:06 (1551541): called boinc_finish(0)

</stderr_txt>
]]>

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