Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
07:28:12 (1933830): wrapper (7.7.26015): starting
07:28:12 (1933830): wrapper: running run_atlas (--nthreads 3)
[2025-04-20 07:28:12] Arguments: --nthreads 3
[2025-04-20 07:28:12] Threads: 3
[2025-04-20 07:28:12] Checking for CVMFS
[2025-04-20 07:28:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-20 07:28:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-20 07:28:12] Running cvmfs_config stat atlas.cern.ch
[2025-04-20 07:28:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-20 07:28:13] 2.9.2.0 2880 6968 69436 145063 2 56 25708215 36864000 0 130560 0 4975797 99.991 1816363 13506 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-04-20 07:28:13] CVMFS is ok
[2025-04-20 07:28:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-20 07:28:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-20 07:28:13] Further information can be found at the LHC@home message board.
[2025-04-20 07:28:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-20 07:28:13] Checking for apptainer binary...
[2025-04-20 07:28:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-20 07:28:13] Running /usr/bin/apptainer --version
[2025-04-20 07:28:13] apptainer version 1.3.6-6.1
[2025-04-20 07:28:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-20 07:28:13] thA387a
[2025-04-20 07:28:13] apptainer works
[2025-04-20 07:28:13] Set ATHENA_PROC_NUMBER=3
[2025-04-20 07:28:13] Set ATHENA_CORE_NUMBER=3
[2025-04-20 07:28:13] Starting ATLAS job with PandaID=6608071640
[2025-04-20 07:28:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-20 09:07:25]  *** The last 200 lines of the pilot log: ***
[2025-04-20 09:07:25]  is_tar=False
[2025-04-20 09:07:25]  lfn=log.44075483._086834.job.log.tgz.1
[2025-04-20 09:07:25]  mtime=0
[2025-04-20 09:07:25]  protocol_id=None
[2025-04-20 09:07:25]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-20 09:07:25]  replicas=None
[2025-04-20 09:07:25]  scope=mc23_13p6TeV
[2025-04-20 09:07:25]  status=None
[2025-04-20 09:07:25]  status_code=0
[2025-04-20 09:07:25]  storage_token=
[2025-04-20 09:07:25]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6608071640/log.44075483._086834.job.log.tgz.1
[2025-04-20 09:07:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b5/1c/log.44075483._086834.job.log.tgz.1
[2025-04-20 09:07:25]  workdir=None
[2025-04-20 09:07:25] ]
[2025-04-20 09:07:25] 2025-04-20 07:06:59,370 | INFO     | transferring file log.44075483._086834.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6608071640/log.44075483._086834.job.log.tgz.1 to /local/data/boinc/
[2025-04-20 09:07:25] 2025-04-20 07:06:59,370 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6608071640/log.44075483._086834.job.log.tgz.1 /local/data/boinc/slots/0/log.44075483._0868
[2025-04-20 09:07:25] 2025-04-20 07:06:59,383 | INFO     | adding to output.list: log.44075483._086834.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b5/1c/log.44075483._086834.job.log.tg
[2025-04-20 09:07:25] 2025-04-20 07:06:59,384 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-20 09:07:25] 2025-04-20 07:06:59,384 | INFO     | summary of transferred files:
[2025-04-20 09:07:25] 2025-04-20 07:06:59,384 | INFO     |  -- lfn=log.44075483._086834.job.log.tgz.1, status_code=0, status=transferred
[2025-04-20 09:07:25] 2025-04-20 07:06:59,384 | INFO     | stage-out finished correctly
[2025-04-20 09:07:25] 2025-04-20 07:06:59,416 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-20 09:07:25] 2025-04-20 07:07:01,244 | WARNING  | process 1943920 can no longer be monitored (due to stat problems) - aborting
[2025-04-20 09:07:25] 2025-04-20 07:07:01,244 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6608071640/memory_monitor_summary.json (trf name=prmon)
[2025-04-20 09:07:25] 2025-04-20 07:07:01,278 | INFO     | number of running child processes to parent process 1943920: 1
[2025-04-20 09:07:25] 2025-04-20 07:07:01,278 | INFO     | maximum number of monitored processes: 6
[2025-04-20 09:07:25] 2025-04-20 07:07:02,372 | INFO     | job 6608071640 has state=finished
[2025-04-20 09:07:25] 2025-04-20 07:07:02,373 | INFO     | preparing for final server update for job 6608071640 in state='finished'
[2025-04-20 09:07:25] 2025-04-20 07:07:02,374 | INFO     | this job has now completed (state=finished)
[2025-04-20 09:07:25] 2025-04-20 07:07:02,374 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-20 09:07:25] 2025-04-20 07:07:02,374 | INFO     | log transfer has been attempted: DONE
[2025-04-20 09:07:25] 2025-04-20 07:07:02,374 | INFO     | job 6608071640 has finished - writing final server update
[2025-04-20 09:07:25] 2025-04-20 07:07:02,375 | INFO     | total number of processed events: 400 (read)
[2025-04-20 09:07:25] 2025-04-20 07:07:02,378 | INFO     | executing command: lscpu
[2025-04-20 09:07:25] 2025-04-20 07:07:02,395 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-20 09:07:25] 2025-04-20 07:07:03,782 | INFO     | monitor loop #455: job 0:6608071640 is in state 'finished'
[2025-04-20 09:07:25] 2025-04-20 07:07:03,782 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 09:07:25] 2025-04-20 07:07:06,286 | INFO     | monitor loop #456: job 0:6608071640 is in state 'finished'
[2025-04-20 09:07:25] 2025-04-20 07:07:06,286 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 09:07:25] 2025-04-20 07:07:07,557 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-20 09:07:25] 2025-04-20 07:07:07,557 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6608071640/memory_monitor_summary.json (trf name=prmon)
[2025-04-20 09:07:25] 2025-04-20 07:07:07,557 | INFO     | extracted standard info from prmon json
[2025-04-20 09:07:25] 2025-04-20 07:07:07,558 | INFO     | extracted standard memory fields from prmon json
[2025-04-20 09:07:25] 2025-04-20 07:07:07,558 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-20 09:07:25] 2025-04-20 07:07:07,558 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-20 09:07:25] 2025-04-20 07:07:07,558 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-20 09:07:25] 2025-04-20 07:07:07,559 | INFO     | fitting pss+swap vs Time
[2025-04-20 09:07:25] 2025-04-20 07:07:07,559 | INFO     | sum of square deviations: 226022842.5
[2025-04-20 09:07:25] 2025-04-20 07:07:07,559 | INFO     | sum of deviations: 1232939746.9999998
[2025-04-20 09:07:25] 2025-04-20 07:07:07,559 | INFO     | mean x: 1745129948.5
[2025-04-20 09:07:25] 2025-04-20 07:07:07,559 | INFO     | mean y: 2421678.111111111
[2025-04-20 09:07:25] 2025-04-20 07:07:07,559 | INFO     | -- intersect: -9517147465.373636
[2025-04-20 09:07:25] 2025-04-20 07:07:07,559 | INFO     | intersect: -9517147465.373636
[2025-04-20 09:07:25] 2025-04-20 07:07:07,559 | INFO     | chi2: 1.0564580825586765
[2025-04-20 09:07:25] 2025-04-20 07:07:07,559 | INFO     | -- intersect: -9517147465.373636
[2025-04-20 09:07:25] 2025-04-20 07:07:07,559 | INFO     | current memory leak: 5.45 B/s (using 90 data points, chi2=1.06)
[2025-04-20 09:07:25] 2025-04-20 07:07:07,559 | INFO     | ..............................
[2025-04-20 09:07:25] 2025-04-20 07:07:07,559 | INFO     | . Timing measurements:
[2025-04-20 09:07:25] 2025-04-20 07:07:07,559 | INFO     | . get job = 0 s
[2025-04-20 09:07:25] 2025-04-20 07:07:07,559 | INFO     | . initial setup = 1 s
[2025-04-20 09:07:25] 2025-04-20 07:07:07,559 | INFO     | . payload setup = 4 s
[2025-04-20 09:07:25] 2025-04-20 07:07:07,559 | INFO     | . stage-in = 0 s
[2025-04-20 09:07:25] 2025-04-20 07:07:07,560 | INFO     | . payload execution = 5889 s
[2025-04-20 09:07:25] 2025-04-20 07:07:07,560 | INFO     | . stage-out = 0 s
[2025-04-20 09:07:25] 2025-04-20 07:07:07,560 | INFO     | . log creation = 0 s
[2025-04-20 09:07:25] 2025-04-20 07:07:07,560 | INFO     | ..............................
[2025-04-20 09:07:25] 2025-04-20 07:07:07,593 | INFO     | 
[2025-04-20 09:07:25] 2025-04-20 07:07:07,593 | INFO     | job summary report
[2025-04-20 09:07:25] 2025-04-20 07:07:07,593 | INFO     | --------------------------------------------------
[2025-04-20 09:07:25] 2025-04-20 07:07:07,593 | INFO     | PanDA job id: 6608071640
[2025-04-20 09:07:25] 2025-04-20 07:07:07,593 | INFO     | task id: 44075483
[2025-04-20 09:07:25] 2025-04-20 07:07:07,593 | INFO     | errors: (none)
[2025-04-20 09:07:25] 2025-04-20 07:07:07,593 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-20 09:07:25] 2025-04-20 07:07:07,593 | INFO     | pilot state: finished 
[2025-04-20 09:07:25] 2025-04-20 07:07:07,593 | INFO     | transexitcode: 0
[2025-04-20 09:07:25] 2025-04-20 07:07:07,593 | INFO     | exeerrorcode: 0
[2025-04-20 09:07:25] 2025-04-20 07:07:07,593 | INFO     | exeerrordiag: 
[2025-04-20 09:07:25] 2025-04-20 07:07:07,593 | INFO     | exitcode: 0
[2025-04-20 09:07:25] 2025-04-20 07:07:07,593 | INFO     | exitmsg: OK
[2025-04-20 09:07:25] 2025-04-20 07:07:07,593 | INFO     | cpuconsumptiontime: 15788 s
[2025-04-20 09:07:25] 2025-04-20 07:07:07,593 | INFO     | nevents: 400
[2025-04-20 09:07:25] 2025-04-20 07:07:07,593 | INFO     | neventsw: 0
[2025-04-20 09:07:25] 2025-04-20 07:07:07,593 | INFO     | pid: 1943920
[2025-04-20 09:07:25] 2025-04-20 07:07:07,593 | INFO     | pgrp: 1943920
[2025-04-20 09:07:25] 2025-04-20 07:07:07,593 | INFO     | corecount: 3
[2025-04-20 09:07:25] 2025-04-20 07:07:07,593 | INFO     | event service: False
[2025-04-20 09:07:25] 2025-04-20 07:07:07,593 | INFO     | sizes: {0: 2426827, 5: 2427033, 11: 2427089, 5897: 2453784, 5898: 2453783, 5899: 2462970, 5907: 2463084}
[2025-04-20 09:07:25] 2025-04-20 07:07:07,593 | INFO     | --------------------------------------------------
[2025-04-20 09:07:25] 2025-04-20 07:07:07,593 | INFO     | 
[2025-04-20 09:07:25] 2025-04-20 07:07:07,593 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-04-20 09:07:25] 2025-04-20 07:07:07,606 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-20 09:07:25] 2025-04-20 07:07:07,606 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-20 09:07:25] 2025-04-20 07:07:07,606 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-20 09:07:25] 2025-04-20 07:07:07,606 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-20 09:07:25] 2025-04-20 07:07:07,606 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-20 09:07:25] 2025-04-20 07:07:07,606 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-20 09:07:25] 2025-04-20 07:07:07,606 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-20 09:07:25] 2025-04-20 07:07:07,606 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-20 09:07:25] 2025-04-20 07:07:07,606 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-20 09:07:25] 2025-04-20 07:07:07,606 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-20 09:07:25] 2025-04-20 07:07:07,606 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-20 09:07:25] 2025-04-20 07:07:07,606 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-20 09:07:25] 2025-04-20 07:07:07,606 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-20 09:07:25] 2025-04-20 07:07:07,606 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-20 09:07:25] 2025-04-20 07:07:07,606 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-20 09:07:25] 2025-04-20 07:07:07,606 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-20 09:07:25] 2025-04-20 07:07:07,606 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-20 09:07:25] 2025-04-20 07:07:07,606 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-20 09:07:25] 2025-04-20 07:07:07,606 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-20 09:07:25] 2025-04-20 07:07:07,606 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-20 09:07:25] 2025-04-20 07:07:07,607 | INFO     | job 6608071640 has completed (purged errors)
[2025-04-20 09:07:25] 2025-04-20 07:07:07,607 | INFO     | overall cleanup function is called
[2025-04-20 09:07:25] 2025-04-20 07:07:08,613 | INFO     | --- collectZombieJob: --- 10, [1943920]
[2025-04-20 09:07:25] 2025-04-20 07:07:08,613 | INFO     | zombie collector waiting for pid 1943920
[2025-04-20 09:07:25] 2025-04-20 07:07:08,614 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-20 09:07:25] 2025-04-20 07:07:08,614 | INFO     | collected zombie processes
[2025-04-20 09:07:25] 2025-04-20 07:07:08,614 | INFO     | will attempt to kill all subprocesses of pid=1943920
[2025-04-20 09:07:25] 2025-04-20 07:07:08,654 | INFO     | process IDs to be killed: [1943920] (in reverse order)
[2025-04-20 09:07:25] 2025-04-20 07:07:08,681 | WARNING  | found no corresponding commands to process id(s)
[2025-04-20 09:07:25] 2025-04-20 07:07:08,681 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-20 09:07:25] 2025-04-20 07:07:08,682 | INFO     | did not find any defunct processes belonging to 1943920
[2025-04-20 09:07:25] 2025-04-20 07:07:08,683 | INFO     | did not find any defunct processes belonging to 1943920
[2025-04-20 09:07:25] 2025-04-20 07:07:08,683 | INFO     | ready for new job
[2025-04-20 09:07:25] 2025-04-20 07:07:08,683 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-20 09:07:25] 2025-04-20 07:07:08,684 | INFO     | **************************************
[2025-04-20 09:07:25] 2025-04-20 07:07:08,684 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-20 09:07:25] 2025-04-20 07:07:08,684 | INFO     | **************************************
[2025-04-20 09:07:25] 2025-04-20 07:07:08,684 | INFO     | 
[2025-04-20 09:07:25] 2025-04-20 07:07:08,684 | INFO     | architecture information:
[2025-04-20 09:07:25] 2025-04-20 07:07:08,684 | INFO     | executing command: cat /etc/os-release
[2025-04-20 09:07:25] 2025-04-20 07:07:08,694 | INFO     | cat /etc/os-release:
[2025-04-20 09:07:25] NAME="CentOS Linux"
[2025-04-20 09:07:25] VERSION="7 (Core)"
[2025-04-20 09:07:25] ID="centos"
[2025-04-20 09:07:25] ID_LIKE="rhel fedora"
[2025-04-20 09:07:25] VERSION_ID="7"
[2025-04-20 09:07:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-20 09:07:25] ANSI_COLOR="0;31"
[2025-04-20 09:07:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-20 09:07:25] HOME_URL="https://www.centos.org/"
[2025-04-20 09:07:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-20 09:07:25] 
[2025-04-20 09:07:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-20 09:07:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-20 09:07:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-20 09:07:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-20 09:07:25] 
[2025-04-20 09:07:25] 2025-04-20 07:07:08,695 | INFO     | **************************************
[2025-04-20 09:07:25] 2025-04-20 07:07:09,198 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-04-20 09:07:25] 2025-04-20 07:07:09,212 | INFO     | sufficient remaining disk space (831502942208 B)
[2025-04-20 09:07:25] 2025-04-20 07:07:09,212 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-20 09:07:25] 2025-04-20 07:07:09,212 | INFO     | current server update state: UPDATING_FINAL
[2025-04-20 09:07:25] 2025-04-20 07:07:09,212 | INFO     | update_server=False
[2025-04-20 09:07:25] 2025-04-20 07:07:09,212 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-20 09:07:25] 2025-04-20 07:07:09,212 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-20 09:07:25] 2025-04-20 07:07:09,391 | INFO     | all data control threads have been joined
[2025-04-20 09:07:25] 2025-04-20 07:07:09,632 | INFO     | PID=1937484 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-20 09:07:25] 2025-04-20 07:07:09,632 | INFO     | found 0 job(s) in 20 queues
[2025-04-20 09:07:25] 2025-04-20 07:07:09,632 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-20 09:07:25] 2025-04-20 07:07:09,632 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-20 09:07:25] 2025-04-20 07:07:09,795 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-20 09:07:25] 2025-04-20 07:07:09,795 | INFO     | aborting loop
[2025-04-20 09:07:25] 2025-04-20 07:07:09,931 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-20 09:07:25] 2025-04-20 07:07:09,957 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-20 09:07:25] 2025-04-20 07:07:10,218 | INFO     | [job] retrieve thread has finished
[2025-04-20 09:07:25] 2025-04-20 07:07:10,219 | INFO     | [job] queue monitor thread has finished
[2025-04-20 09:07:25] 2025-04-20 07:07:10,391 | INFO     | all job control threads have been joined
[2025-04-20 09:07:25] 2025-04-20 07:07:10,397 | INFO     | [data] control thread has finished
[2025-04-20 09:07:25] 2025-04-20 07:07:10,492 | INFO     | [payload] validate_post thread has finished
[2025-04-20 09:07:25] 2025-04-20 07:07:10,658 | INFO     | all payload control threads have been joined
[2025-04-20 09:07:25] 2025-04-20 07:07:10,801 | INFO     | [job] job monitor thread has finished
[2025-04-20 09:07:25] 2025-04-20 07:07:10,973 | INFO     | [payload] execute_payloads thread has finished
[2025-04-20 09:07:25] 2025-04-20 07:07:11,397 | INFO     | [job] control thread has finished
[2025-04-20 09:07:25] 2025-04-20 07:07:11,485 | INFO     | [job] validate thread has finished
[2025-04-20 09:07:25] 2025-04-20 07:07:11,486 | INFO     | [payload] validate_pre thread has finished
[2025-04-20 09:07:25] 2025-04-20 07:07:11,555 | INFO     | [job] create_data_payload thread has finished
[2025-04-20 09:07:25] 2025-04-20 07:07:11,564 | INFO     | [payload] failed_post thread has finished
[2025-04-20 09:07:25] 2025-04-20 07:07:11,664 | INFO     | [payload] control thread has finished
[2025-04-20 09:07:25] 2025-04-20 07:07:11,700 | INFO     | [data] copytool_in thread has finished
[2025-04-20 09:07:25] 2025-04-20 07:07:11,938 | INFO     | [data] copytool_out thread has finished
[2025-04-20 09:07:25] 2025-04-20 07:07:13,964 | INFO     | [data] queue_monitor thread has finished
[2025-04-20 09:07:25] 2025-04-20 07:07:19,593 | INFO     | job.realtimelogging is not enabled
[2025-04-20 09:07:25] 2025-04-20 07:07:20,599 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-20 09:07:25] 2025-04-20 07:07:20,701 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139969118103360)>', '<ExcThread(monitor, started 139968835979008)>']
[2025-04-20 09:07:25] 2025-04-20 07:07:21,696 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-20 09:07:25] 2025-04-20 07:07:21,696 | INFO     | [monitor] control thread has ended
[2025-04-20 09:07:25] 2025-04-20 07:07:25,727 | INFO     | all workflow threads have been joined
[2025-04-20 09:07:25] 2025-04-20 07:07:25,728 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-20 09:07:25] 2025-04-20 07:07:25,728 | INFO     | traces error code: 0
[2025-04-20 09:07:25] 2025-04-20 07:07:25,729 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-20 09:07:25] 2025-04-20 07:07:25,775 [wrapper] ==== pilot stdout END ====
[2025-04-20 09:07:25] 2025-04-20 07:07:25,778 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-20 09:07:25] 2025-04-20 07:07:25,781 [wrapper] pilotpid: 1937484
[2025-04-20 09:07:25] 2025-04-20 07:07:25,784 [wrapper] Pilot exit status: 0
[2025-04-20 09:07:25] 2025-04-20 07:07:25,792 [wrapper] pandaids: 6608071640
[2025-04-20 09:07:25] 2025-04-20 07:07:25,808 [wrapper] cleanup supervisor_pilot 1956169 1937485
[2025-04-20 09:07:25] 2025-04-20 07:07:25,811 [wrapper] Test setup, not cleaning
[2025-04-20 09:07:25] 2025-04-20 07:07:25,813 [wrapper] apfmon messages muted
[2025-04-20 09:07:25] 2025-04-20 07:07:25,816 [wrapper] ==== wrapper stdout END ====
[2025-04-20 09:07:25] 2025-04-20 07:07:25,818 [wrapper] ==== wrapper stderr END ====
[2025-04-20 09:07:25]  *** Error codes and diagnostics ***
[2025-04-20 09:07:25]     "exeErrorCode": 0,
[2025-04-20 09:07:25]     "exeErrorDiag": "",
[2025-04-20 09:07:25]     "pilotErrorCode": 0,
[2025-04-20 09:07:25]     "pilotErrorDiag": "",
[2025-04-20 09:07:25]  *** Listing of results directory ***
[2025-04-20 09:07:25] total 414664
[2025-04-20 09:07:25] -rw-r--r-- 1 boinc boinc    495897 Apr 19 20:30 pilot3.tar.gz
[2025-04-20 09:07:25] -rw-r--r-- 1 boinc boinc      5111 Apr 19 20:34 queuedata.json
[2025-04-20 09:07:25] -rwx------ 1 boinc boinc     37140 Apr 19 20:35 runpilot2-wrapper.sh
[2025-04-20 09:07:25] -rw-r--r-- 1 boinc boinc       100 Apr 20 07:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-20 09:07:25] -rwxr-xr-x 1 boinc boinc      7986 Apr 20 07:28 run_atlas
[2025-04-20 09:07:25] -rw-r--r-- 1 boinc boinc       105 Apr 20 07:28 job.xml
[2025-04-20 09:07:25] -rw-r--r-- 2 boinc boinc 226821286 Apr 20 07:28 EVNT.44075481._003386.pool.root.1
[2025-04-20 09:07:25] -rw-r--r-- 1 boinc boinc      6680 Apr 20 07:28 init_data.xml
[2025-04-20 09:07:25] drwxrwx--x 2 boinc boinc      4096 Apr 20 07:28 shared
[2025-04-20 09:07:25] -rw-r--r-- 2 boinc boinc    508894 Apr 20 07:28 input.tar.gz
[2025-04-20 09:07:25] -rw-r--r-- 2 boinc boinc     17569 Apr 20 07:28 start_atlas.sh
[2025-04-20 09:07:25] -rw-r--r-- 1 boinc boinc         0 Apr 20 07:28 boinc_lockfile
[2025-04-20 09:07:25] -rw-r--r-- 1 boinc boinc      2579 Apr 20 07:28 pandaJob.out
[2025-04-20 09:07:25] -rw------- 1 boinc boinc       424 Apr 20 07:28 setup.sh.local
[2025-04-20 09:07:25] -rw------- 1 boinc boinc    991292 Apr 20 07:28 agis_schedconf.cvmfs.json
[2025-04-20 09:07:25] -rw------- 1 boinc boinc   1618536 Apr 20 07:28 agis_ddmendpoints.agis.ALL.json
[2025-04-20 09:07:25] drwx------ 4 boinc boinc      4096 Apr 20 07:28 pilot3
[2025-04-20 09:07:25] -rw------- 1 boinc boinc 192320744 Apr 20 09:06 HITS.44075483._086834.pool.root.1
[2025-04-20 09:07:25] -rw-r--r-- 1 boinc boinc       529 Apr 20 09:06 boinc_task_state.xml
[2025-04-20 09:07:25] -rw------- 1 boinc boinc        95 Apr 20 09:06 pilot_heartbeat.json
[2025-04-20 09:07:25] -rw------- 1 boinc boinc      1020 Apr 20 09:06 memory_monitor_summary.json
[2025-04-20 09:07:25] -rw------- 1 boinc boinc    234395 Apr 20 09:06 log.44075483._086834.job.log.tgz.1
[2025-04-20 09:07:25] -rw------- 1 boinc boinc      7657 Apr 20 09:07 heartbeat.json
[2025-04-20 09:07:25] -rw-r--r-- 1 boinc boinc      8192 Apr 20 09:07 boinc_mmap_file
[2025-04-20 09:07:25] -rw-r--r-- 1 boinc boinc        27 Apr 20 09:07 wrapper_checkpoint.txt
[2025-04-20 09:07:25] -rw------- 1 boinc boinc      4748 Apr 20 09:07 pilotlog.txt
[2025-04-20 09:07:25] -rw------- 1 boinc boinc    567615 Apr 20 09:07 log.44075483._086834.job.log.1
[2025-04-20 09:07:25] -rw------- 1 boinc boinc       357 Apr 20 09:07 output.list
[2025-04-20 09:07:25] -rw-r--r-- 1 boinc boinc       620 Apr 20 09:07 runtime_log
[2025-04-20 09:07:25] -rw------- 1 boinc boinc    819200 Apr 20 09:07 result.tar.gz
[2025-04-20 09:07:25] -rw-r--r-- 1 boinc boinc     11104 Apr 20 09:07 runtime_log.err
[2025-04-20 09:07:25] -rw------- 1 boinc boinc       659 Apr 20 09:07 hJ5KDm9CSQ7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmgr6KDmRtE7Tn.diag
[2025-04-20 09:07:25] -rw-r--r-- 1 boinc boinc     21572 Apr 20 09:07 stderr.txt
[2025-04-20 09:07:25] HITS file was successfully produced:
[2025-04-20 09:07:25] -rw------- 1 boinc boinc 192320744 Apr 20 09:06 shared/HITS.pool.root.1
[2025-04-20 09:07:25]  *** Contents of shared directory: ***
[2025-04-20 09:07:25] total 410652
[2025-04-20 09:07:25] -rw-r--r-- 2 boinc boinc 226821286 Apr 20 07:28 ATLAS.root_0
[2025-04-20 09:07:25] -rw-r--r-- 2 boinc boinc    508894 Apr 20 07:28 input.tar.gz
[2025-04-20 09:07:25] -rw-r--r-- 2 boinc boinc     17569 Apr 20 07:28 start_atlas.sh
[2025-04-20 09:07:25] -rw------- 1 boinc boinc 192320744 Apr 20 09:06 HITS.pool.root.1
[2025-04-20 09:07:25] -rw------- 1 boinc boinc    819200 Apr 20 09:07 result.tar.gz
09:07:27 (1933830): run_atlas exited; CPU time 15820.270446
09:07:27 (1933830): called boinc_finish(0)

</stderr_txt>
]]>

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