Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:42:39 (89470): wrapper (7.7.26015): starting
17:42:39 (89470): wrapper: running run_atlas (--nthreads 8)
[2025-04-19 17:42:39] Arguments: --nthreads 8
[2025-04-19 17:42:39] Threads: 8
[2025-04-19 17:42:39] Checking for CVMFS
[2025-04-19 17:42:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 17:42:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 17:42:39] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 17:42:40] /usr/bin/cvmfs_config: line 944: cd: /cvmfs/ligo.storage.igwn.org: Permission denied
[2025-04-19 17:42:40] 
[2025-04-19 17:42:40] CVMFS is ok
[2025-04-19 17:42:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 17:42:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 17:42:40] Further information can be found at the LHC@home message board.
[2025-04-19 17:42:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 17:42:40] Checking for apptainer binary...
[2025-04-19 17:42:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 17:42:40] Running /usr/bin/apptainer --version
[2025-04-19 17:42:40] apptainer version 1.3.2-1.el7
[2025-04-19 17:42:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 17:42:44] c-212-15.aglt2.org
[2025-04-19 17:42:44] apptainer works
[2025-04-19 17:42:44] Set ATHENA_PROC_NUMBER=8
[2025-04-19 17:42:44] Set ATHENA_CORE_NUMBER=8
[2025-04-19 17:42:44] Starting ATLAS job with PandaID=6607987161
[2025-04-19 17:42:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 21:33:32]  *** The last 200 lines of the pilot log: ***
[2025-04-19 21:33:32] 2025-04-20 01:33:14,104 | INFO     | -- intersect: -73034439903.68437
[2025-04-19 21:33:32] 2025-04-20 01:33:14,104 | INFO     | intersect: -73034439903.68437
[2025-04-19 21:33:32] 2025-04-20 01:33:14,104 | INFO     | chi2: 6.863525706671237
[2025-04-19 21:33:32] 2025-04-20 01:33:14,104 | INFO     | sum of square deviations: 3256945694.5205607
[2025-04-19 21:33:32] 2025-04-20 01:33:14,117 | INFO     | sum of deviations: 157218784186.589
[2025-04-19 21:33:32] 2025-04-20 01:33:14,117 | INFO     | mean x: 1745105743.0821917
[2025-04-19 21:33:32] 2025-04-20 01:33:14,117 | INFO     | mean y: 2374499.02283105
[2025-04-19 21:33:32] 2025-04-20 01:33:14,117 | INFO     | -- intersect: -84237102894.16835
[2025-04-19 21:33:32] 2025-04-20 01:33:14,117 | INFO     | intersect: -84237102894.16835
[2025-04-19 21:33:32] 2025-04-20 01:33:14,117 | INFO     | chi2: 6.066358346234229
[2025-04-19 21:33:32] 2025-04-20 01:33:14,117 | INFO     | current chi2=6.066358346234229 (change=11.614546145899537 %)
[2025-04-19 21:33:32] 2025-04-20 01:33:14,117 | INFO     | right removable region: 218
[2025-04-19 21:33:32] 2025-04-20 01:33:14,118 | INFO     | sum of square deviations: 3256934714.5205607
[2025-04-19 21:33:32] 2025-04-20 01:33:14,119 | INFO     | sum of deviations: 84009994948.52063
[2025-04-19 21:33:32] 2025-04-20 01:33:14,119 | INFO     | mean x: 1745106048.0821917
[2025-04-19 21:33:32] 2025-04-20 01:33:14,119 | INFO     | mean y: 2408343.415525114
[2025-04-19 21:33:32] 2025-04-20 01:33:14,119 | INFO     | -- intersect: -45011189758.62657
[2025-04-19 21:33:32] 2025-04-20 01:33:14,119 | INFO     | intersect: -45011189758.62657
[2025-04-19 21:33:32] 2025-04-20 01:33:14,119 | INFO     | chi2: 3.6187262179442174
[2025-04-19 21:33:32] 2025-04-20 01:33:14,120 | INFO     | current chi2=3.6187262179442174 (change=47.27598653230258 %)
[2025-04-19 21:33:32] 2025-04-20 01:33:14,120 | INFO     | sum of square deviations: 3038906531.9859767
[2025-04-19 21:33:32] 2025-04-20 01:33:14,127 | INFO     | sum of deviations: 37515234479.528
[2025-04-19 21:33:32] 2025-04-20 01:33:14,127 | INFO     | mean x: 1745106200.5841122
[2025-04-19 21:33:32] 2025-04-20 01:33:14,127 | INFO     | mean y: 2440868.331775701
[2025-04-19 21:33:32] 2025-04-20 01:33:14,127 | INFO     | -- intersect: -21540856899.30529
[2025-04-19 21:33:32] 2025-04-20 01:33:14,127 | INFO     | intersect: -21540856899.30529
[2025-04-19 21:33:32] 2025-04-20 01:33:14,128 | INFO     | chi2: 1.943085334377237
[2025-04-19 21:33:32] 2025-04-20 01:33:14,128 | INFO     | current chi2=1.943085334377237 (change=46.304715600145755 %)
[2025-04-19 21:33:32] 2025-04-20 01:33:14,128 | INFO     | sum of square deviations: 2830832024.449761
[2025-04-19 21:33:32] 2025-04-20 01:33:14,129 | INFO     | sum of deviations: 2927347173.7081337
[2025-04-19 21:33:32] 2025-04-20 01:33:14,129 | INFO     | mean x: 1745106353.0861244
[2025-04-19 21:33:32] 2025-04-20 01:33:14,129 | INFO     | mean y: 2466107.071770335
[2025-04-19 21:33:32] 2025-04-20 01:33:14,129 | INFO     | -- intersect: -1802138371.8957653
[2025-04-19 21:33:32] 2025-04-20 01:33:14,129 | INFO     | intersect: -1802138371.8957653
[2025-04-19 21:33:32] 2025-04-20 01:33:14,129 | INFO     | chi2: 0.8982446320726502
[2025-04-19 21:33:32] 2025-04-20 01:33:14,130 | INFO     | current chi2=0.8982446320726502 (change=53.77224992743103 %)
[2025-04-19 21:33:32] 2025-04-20 01:33:14,130 | INFO     | sum of square deviations: 2632478629.4117727
[2025-04-19 21:33:32] 2025-04-20 01:33:14,141 | INFO     | sum of deviations: -5306271318.823526
[2025-04-19 21:33:32] 2025-04-20 01:33:14,141 | INFO     | mean x: 1745106505.5882354
[2025-04-19 21:33:32] 2025-04-20 01:33:14,141 | INFO     | mean y: 2472413.2401960786
[2025-04-19 21:33:32] 2025-04-20 01:33:14,142 | INFO     | -- intersect: 3520073086.39907
[2025-04-19 21:33:32] 2025-04-20 01:33:14,142 | INFO     | intersect: 3520073086.39907
[2025-04-19 21:33:32] 2025-04-20 01:33:14,142 | INFO     | chi2: 0.8400185625694919
[2025-04-19 21:33:32] 2025-04-20 01:33:14,142 | INFO     | current chi2=0.8400185625694919 (change=6.482206230256536 %)
[2025-04-19 21:33:32] 2025-04-20 01:33:14,142 | INFO     | left removable region: 40
[2025-04-19 21:33:32] 2025-04-20 01:33:14,142 | INFO     | sum of square deviations: 1748772756.8764021
[2025-04-19 21:33:32] 2025-04-20 01:33:14,143 | INFO     | sum of deviations: 4761082977.932586
[2025-04-19 21:33:32] 2025-04-20 01:33:14,143 | INFO     | mean x: 1745106932.5955057
[2025-04-19 21:33:32] 2025-04-20 01:33:14,143 | INFO     | mean y: 2486364.915730337
[2025-04-19 21:33:32] 2025-04-20 01:33:14,143 | INFO     | -- intersect: -4748616303.388152
[2025-04-19 21:33:32] 2025-04-20 01:33:14,144 | INFO     | intersect: -4748616303.388152
[2025-04-19 21:33:32] 2025-04-20 01:33:14,144 | INFO     | chi2: 0.0007011900147300327
[2025-04-19 21:33:32] 2025-04-20 01:33:14,144 | INFO     | -- intersect: -4748616303.388152
[2025-04-19 21:33:32] 2025-04-20 01:33:14,144 | INFO     | current memory leak: 2.72 B/s (using 178 data points, chi2=0.00)
[2025-04-19 21:33:32] 2025-04-20 01:33:14,155 | INFO     | ..............................
[2025-04-19 21:33:32] 2025-04-20 01:33:14,155 | INFO     | . Timing measurements:
[2025-04-19 21:33:32] 2025-04-20 01:33:14,155 | INFO     | . get job = 0 s
[2025-04-19 21:33:32] 2025-04-20 01:33:14,155 | INFO     | . initial setup = 3 s
[2025-04-19 21:33:32] 2025-04-20 01:33:14,155 | INFO     | . payload setup = 24 s
[2025-04-19 21:33:32] 2025-04-20 01:33:14,155 | INFO     | . stage-in = 0 s
[2025-04-19 21:33:32] 2025-04-20 01:33:14,156 | INFO     | . payload execution = 13673 s
[2025-04-19 21:33:32] 2025-04-20 01:33:14,156 | INFO     | . stage-out = 3 s
[2025-04-19 21:33:32] 2025-04-20 01:33:14,156 | INFO     | . log creation = 0 s
[2025-04-19 21:33:32] 2025-04-20 01:33:14,156 | INFO     | ..............................
[2025-04-19 21:33:32] 2025-04-20 01:33:14,437 | INFO     | 
[2025-04-19 21:33:32] 2025-04-20 01:33:14,437 | INFO     | job summary report
[2025-04-19 21:33:32] 2025-04-20 01:33:14,437 | INFO     | --------------------------------------------------
[2025-04-19 21:33:32] 2025-04-20 01:33:14,437 | INFO     | PanDA job id: 6607987161
[2025-04-19 21:33:32] 2025-04-20 01:33:14,437 | INFO     | task id: 44075483
[2025-04-19 21:33:32] 2025-04-20 01:33:14,438 | INFO     | errors: (none)
[2025-04-19 21:33:32] 2025-04-20 01:33:14,438 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 21:33:32] 2025-04-20 01:33:14,438 | INFO     | pilot state: finished 
[2025-04-19 21:33:32] 2025-04-20 01:33:14,438 | INFO     | transexitcode: 0
[2025-04-19 21:33:32] 2025-04-20 01:33:14,438 | INFO     | exeerrorcode: 0
[2025-04-19 21:33:32] 2025-04-20 01:33:14,438 | INFO     | exeerrordiag: 
[2025-04-19 21:33:32] 2025-04-20 01:33:14,438 | INFO     | exitcode: 0
[2025-04-19 21:33:32] 2025-04-20 01:33:14,438 | INFO     | exitmsg: OK
[2025-04-19 21:33:32] 2025-04-20 01:33:14,438 | INFO     | cpuconsumptiontime: 34182 s
[2025-04-19 21:33:32] 2025-04-20 01:33:14,438 | INFO     | nevents: 400
[2025-04-19 21:33:32] 2025-04-20 01:33:14,438 | INFO     | neventsw: 0
[2025-04-19 21:33:32] 2025-04-20 01:33:14,438 | INFO     | pid: 29360
[2025-04-19 21:33:32] 2025-04-20 01:33:14,438 | INFO     | pgrp: 29360
[2025-04-19 21:33:32] 2025-04-20 01:33:14,438 | INFO     | corecount: 8
[2025-04-19 21:33:32] 2025-04-20 01:33:14,438 | INFO     | event service: False
[2025-04-19 21:33:32] 2025-04-20 01:33:14,438 | INFO     | sizes: {0: 2426653, 1: 2426852, 12: 2426852, 20: 2427086, 22: 2427114, 13702: 2457293, 13705: 2466234, 13707: 2466290, 13757: 2466460}
[2025-04-19 21:33:32] 2025-04-20 01:33:14,438 | INFO     | --------------------------------------------------
[2025-04-19 21:33:32] 2025-04-20 01:33:14,439 | INFO     | 
[2025-04-19 21:33:32] 2025-04-20 01:33:14,439 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-04-19 21:33:32] 2025-04-20 01:33:14,788 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 21:33:32] 2025-04-20 01:33:14,788 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 21:33:32] 2025-04-20 01:33:14,788 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 21:33:32] 2025-04-20 01:33:14,788 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 21:33:32] 2025-04-20 01:33:14,789 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 21:33:32] 2025-04-20 01:33:14,789 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 21:33:32] 2025-04-20 01:33:14,789 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 21:33:32] 2025-04-20 01:33:14,793 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 21:33:32] 2025-04-20 01:33:14,793 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 21:33:32] 2025-04-20 01:33:14,793 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 21:33:32] 2025-04-20 01:33:14,793 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 21:33:32] 2025-04-20 01:33:14,793 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 21:33:32] 2025-04-20 01:33:14,793 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 21:33:32] 2025-04-20 01:33:14,793 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 21:33:32] 2025-04-20 01:33:14,793 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 21:33:32] 2025-04-20 01:33:14,794 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 21:33:32] 2025-04-20 01:33:14,794 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 21:33:32] 2025-04-20 01:33:14,794 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 21:33:32] 2025-04-20 01:33:14,794 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 21:33:32] 2025-04-20 01:33:14,794 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 21:33:32] 2025-04-20 01:33:14,794 | INFO     | job 6607987161 has completed (purged errors)
[2025-04-19 21:33:32] 2025-04-20 01:33:14,794 | INFO     | overall cleanup function is called
[2025-04-19 21:33:32] 2025-04-20 01:33:15,805 | INFO     | --- collectZombieJob: --- 10, [29360]
[2025-04-19 21:33:32] 2025-04-20 01:33:15,806 | INFO     | zombie collector waiting for pid 29360
[2025-04-19 21:33:32] 2025-04-20 01:33:15,806 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 21:33:32] 2025-04-20 01:33:15,806 | INFO     | collected zombie processes
[2025-04-19 21:33:32] 2025-04-20 01:33:15,806 | INFO     | will attempt to kill all subprocesses of pid=29360
[2025-04-19 21:33:32] 2025-04-20 01:33:16,895 | INFO     | PID=6892 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-04-19 21:33:32] 2025-04-20 01:33:16,895 | INFO     | .. there are 42 such processes running
[2025-04-19 21:33:32] 2025-04-20 01:33:17,065 | INFO     | process IDs to be killed: [29360] (in reverse order)
[2025-04-19 21:33:32] 2025-04-20 01:33:17,543 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 21:33:32] 2025-04-20 01:33:17,544 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 21:33:32] 2025-04-20 01:33:17,560 | INFO     | did not find any defunct processes belonging to 29360
[2025-04-19 21:33:32] 2025-04-20 01:33:17,733 | INFO     | did not find any defunct processes belonging to 29360
[2025-04-19 21:33:32] 2025-04-20 01:33:17,733 | INFO     | ready for new job
[2025-04-19 21:33:32] 2025-04-20 01:33:17,733 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 21:33:32] 2025-04-20 01:33:17,745 | INFO     | **************************************
[2025-04-19 21:33:32] 2025-04-20 01:33:17,746 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 21:33:32] 2025-04-20 01:33:17,746 | INFO     | **************************************
[2025-04-19 21:33:32] 2025-04-20 01:33:17,746 | INFO     | 
[2025-04-19 21:33:32] 2025-04-20 01:33:17,771 | INFO     | architecture information:
[2025-04-19 21:33:32] 2025-04-20 01:33:17,775 | INFO     | executing command: cat /etc/os-release
[2025-04-19 21:33:32] 2025-04-20 01:33:17,819 | INFO     | cat /etc/os-release:
[2025-04-19 21:33:32] NAME="CentOS Linux"
[2025-04-19 21:33:32] VERSION="7 (Core)"
[2025-04-19 21:33:32] ID="centos"
[2025-04-19 21:33:32] ID_LIKE="rhel fedora"
[2025-04-19 21:33:32] VERSION_ID="7"
[2025-04-19 21:33:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 21:33:32] ANSI_COLOR="0;31"
[2025-04-19 21:33:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 21:33:32] HOME_URL="https://www.centos.org/"
[2025-04-19 21:33:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 21:33:32] 
[2025-04-19 21:33:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 21:33:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 21:33:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 21:33:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 21:33:32] 
[2025-04-19 21:33:32] 2025-04-20 01:33:17,819 | INFO     | **************************************
[2025-04-19 21:33:32] 2025-04-20 01:33:18,323 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-04-19 21:33:32] 2025-04-20 01:33:18,468 | INFO     | sufficient remaining disk space (103455653888 B)
[2025-04-19 21:33:32] 2025-04-20 01:33:18,468 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 21:33:32] 2025-04-20 01:33:18,468 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 21:33:32] 2025-04-20 01:33:18,468 | INFO     | update_server=False
[2025-04-19 21:33:32] 2025-04-20 01:33:18,468 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 21:33:32] 2025-04-20 01:33:18,537 | INFO     | all data control threads have been joined
[2025-04-19 21:33:32] 2025-04-20 01:33:18,634 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 21:33:32] 2025-04-20 01:33:18,655 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-19 21:33:32] 2025-04-20 01:33:18,655 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-19 21:33:32] 2025-04-20 01:33:18,655 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 21:33:32] 2025-04-20 01:33:18,655 | INFO     | will abort loop
[2025-04-19 21:33:32] 2025-04-20 01:33:18,902 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 21:33:32] 2025-04-20 01:33:18,902 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 21:33:32] 2025-04-20 01:33:18,902 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 21:33:32] 2025-04-20 01:33:18,967 | INFO     | all job control threads have been joined
[2025-04-19 21:33:32] 2025-04-20 01:33:19,381 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 21:33:32] 2025-04-20 01:33:19,467 | INFO     | all payload control threads have been joined
[2025-04-19 21:33:32] 2025-04-20 01:33:19,477 | INFO     | [job] retrieve thread has finished
[2025-04-19 21:33:32] 2025-04-20 01:33:19,543 | INFO     | [data] control thread has finished
[2025-04-19 21:33:32] 2025-04-20 01:33:19,661 | INFO     | [job] job monitor thread has finished
[2025-04-19 21:33:32] 2025-04-20 01:33:19,907 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 21:33:32] 2025-04-20 01:33:19,976 | INFO     | [job] control thread has finished
[2025-04-19 21:33:32] 2025-04-20 01:33:19,977 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 21:33:32] 2025-04-20 01:33:20,387 | INFO     | [job] queue monitor thread has finished
[2025-04-19 21:33:32] 2025-04-20 01:33:20,456 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 21:33:32] 2025-04-20 01:33:20,467 | INFO     | [payload] validate_post thread has finished
[2025-04-19 21:33:32] 2025-04-20 01:33:20,473 | INFO     | [payload] control thread has finished
[2025-04-19 21:33:32] 2025-04-20 01:33:20,587 | INFO     | [job] validate thread has finished
[2025-04-19 21:33:32] 2025-04-20 01:33:20,627 | INFO     | [data] copytool_in thread has finished
[2025-04-19 21:33:32] 2025-04-20 01:33:20,641 | INFO     | [data] copytool_out thread has finished
[2025-04-19 21:33:32] 2025-04-20 01:33:20,704 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 21:33:32] 2025-04-20 01:33:20,753 | INFO     | [payload] failed_post thread has finished
[2025-04-19 21:33:32] 2025-04-20 01:33:20,932 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 21:33:32] 2025-04-20 01:33:23,987 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 21:33:32] 2025-04-20 01:33:25,372 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140321589794624)>', '<ExcThread(monitor, started 140321002350336)>']
[2025-04-19 21:33:32] 2025-04-20 01:33:25,953 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 21:33:32] 2025-04-20 01:33:25,953 | INFO     | [monitor] control thread has ended
[2025-04-19 21:33:32] 2025-04-20 01:33:30,397 | INFO     | all workflow threads have been joined
[2025-04-19 21:33:32] 2025-04-20 01:33:30,397 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 21:33:32] 2025-04-20 01:33:30,397 | INFO     | traces error code: 0
[2025-04-19 21:33:32] 2025-04-20 01:33:30,398 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 21:33:32] 2025-04-20 01:33:30,762 [wrapper] ==== pilot stdout END ====
[2025-04-19 21:33:32] 2025-04-20 01:33:30,787 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 21:33:32] 2025-04-20 01:33:30,821 [wrapper] pilotpid: 6892
[2025-04-19 21:33:32] 2025-04-20 01:33:30,838 [wrapper] Pilot exit status: 0
[2025-04-19 21:33:32] 2025-04-20 01:33:30,906 [wrapper] pandaids: 6607987161
[2025-04-19 21:33:32] 2025-04-20 01:33:31,027 [wrapper] cleanup supervisor_pilot 87793 6893
[2025-04-19 21:33:32] 2025-04-20 01:33:31,036 [wrapper] Test setup, not cleaning
[2025-04-19 21:33:32] 2025-04-20 01:33:31,039 [wrapper] apfmon messages muted
[2025-04-19 21:33:32] 2025-04-20 01:33:31,087 [wrapper] ==== wrapper stdout END ====
[2025-04-19 21:33:32] 2025-04-20 01:33:31,091 [wrapper] ==== wrapper stderr END ====
[2025-04-19 21:33:32]  *** Error codes and diagnostics ***
[2025-04-19 21:33:32]     "exeErrorCode": 0,
[2025-04-19 21:33:32]     "exeErrorDiag": "",
[2025-04-19 21:33:32]     "pilotErrorCode": 0,
[2025-04-19 21:33:32]     "pilotErrorDiag": "",
[2025-04-19 21:33:32]  *** Listing of results directory ***
[2025-04-19 21:33:32] total 412180
[2025-04-19 21:33:32] -rw-r--r-- 1 boincer umatlas    495897 Apr 19 14:07 pilot3.tar.gz
[2025-04-19 21:33:32] -rw-r--r-- 1 boincer umatlas      5111 Apr 19 14:25 queuedata.json
[2025-04-19 21:33:32] -rwx------ 1 boincer umatlas     37140 Apr 19 14:25 runpilot2-wrapper.sh
[2025-04-19 21:33:32] -rw-r--r-- 1 boincer umatlas       100 Apr 19 17:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 21:33:32] -rwxr-xr-x 1 boincer umatlas      7986 Apr 19 17:42 run_atlas
[2025-04-19 21:33:32] -rw-r--r-- 1 boincer umatlas       105 Apr 19 17:42 job.xml
[2025-04-19 21:33:32] -rw-r--r-- 2 boincer umatlas 225289590 Apr 19 17:42 EVNT.44075481._003383.pool.root.1
[2025-04-19 21:33:32] -rw-r--r-- 2 boincer umatlas     17569 Apr 19 17:42 start_atlas.sh
[2025-04-19 21:33:32] drwxrwx--x 2 boincer umatlas      4096 Apr 19 17:42 shared
[2025-04-19 21:33:32] -rw-r--r-- 2 boincer umatlas    508894 Apr 19 17:42 input.tar.gz
[2025-04-19 21:33:32] -rw-r--r-- 1 boincer umatlas         0 Apr 19 17:42 boinc_lockfile
[2025-04-19 21:33:32] -rw-r--r-- 1 boincer umatlas      2579 Apr 19 17:42 pandaJob.out
[2025-04-19 21:33:32] -rw------- 1 boincer umatlas       424 Apr 19 17:42 setup.sh.local
[2025-04-19 21:33:32] -rw------- 1 boincer umatlas    991292 Apr 19 17:43 agis_schedconf.cvmfs.json
[2025-04-19 21:33:32] drwx------ 4 boincer umatlas      4096 Apr 19 17:43 pilot3
[2025-04-19 21:33:32] -rw-r--r-- 1 boincer umatlas      6303 Apr 19 21:31 init_data.xml
[2025-04-19 21:33:32] -rw------- 1 boincer umatlas 189798735 Apr 19 21:31 HITS.44075483._086745.pool.root.1
[2025-04-19 21:33:32] -rw-r--r-- 1 boincer umatlas       531 Apr 19 21:31 boinc_task_state.xml
[2025-04-19 21:33:32] -rw------- 1 boincer umatlas      1095 Apr 19 21:32 memory_monitor_summary.json
[2025-04-19 21:33:32] -rw------- 1 boincer umatlas   1618536 Apr 19 21:32 agis_ddmendpoints.agis.ALL.json
[2025-04-19 21:33:32] -rw------- 1 boincer umatlas    405638 Apr 19 21:32 log.44075483._086745.job.log.tgz.1
[2025-04-19 21:33:32] -rw------- 1 boincer umatlas        95 Apr 19 21:32 pilot_heartbeat.json
[2025-04-19 21:33:32] -rw------- 1 boincer umatlas      7776 Apr 19 21:33 heartbeat.json
[2025-04-19 21:33:32] -rw------- 1 boincer umatlas      4540 Apr 19 21:33 pilotlog.txt
[2025-04-19 21:33:32] -rw------- 1 boincer umatlas   1153787 Apr 19 21:33 log.44075483._086745.job.log.1
[2025-04-19 21:33:32] -rw-r--r-- 1 boincer umatlas      8192 Apr 19 21:33 boinc_mmap_file
[2025-04-19 21:33:32] -rw------- 1 boincer umatlas       357 Apr 19 21:33 output.list
[2025-04-19 21:33:32] -rw-r--r-- 1 boincer umatlas       620 Apr 19 21:33 runtime_log
[2025-04-19 21:33:32] -rw------- 1 boincer umatlas   1576960 Apr 19 21:33 result.tar.gz
[2025-04-19 21:33:32] -rw-r--r-- 1 boincer umatlas        28 Apr 19 21:33 wrapper_checkpoint.txt
[2025-04-19 21:33:32] -rw------- 1 boincer umatlas       663 Apr 19 21:33 un5NDmC4RQ7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmEr6KDmx56jtm.diag
[2025-04-19 21:33:32] -rw-r--r-- 1 boincer umatlas     11014 Apr 19 21:33 runtime_log.err
[2025-04-19 21:33:32] -rw-r--r-- 1 boincer umatlas     20691 Apr 19 21:33 stderr.txt
[2025-04-19 21:33:32] HITS file was successfully produced:
[2025-04-19 21:33:32] -rw------- 1 boincer umatlas 189798735 Apr 19 21:31 shared/HITS.pool.root.1
[2025-04-19 21:33:32]  *** Contents of shared directory: ***
[2025-04-19 21:33:32] total 407428
[2025-04-19 21:33:32] -rw-r--r-- 2 boincer umatlas 225289590 Apr 19 17:42 ATLAS.root_0
[2025-04-19 21:33:32] -rw-r--r-- 2 boincer umatlas     17569 Apr 19 17:42 start_atlas.sh
[2025-04-19 21:33:32] -rw-r--r-- 2 boincer umatlas    508894 Apr 19 17:42 input.tar.gz
[2025-04-19 21:33:32] -rw------- 1 boincer umatlas 189798735 Apr 19 21:31 HITS.pool.root.1
[2025-04-19 21:33:32] -rw------- 1 boincer umatlas   1576960 Apr 19 21:33 result.tar.gz
21:33:34 (89470): run_atlas exited; CPU time 33830.181453
21:33:34 (89470): called boinc_finish(0)

</stderr_txt>
]]>

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