Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:24:45 (3147649): wrapper (7.7.26015): starting
02:24:45 (3147649): wrapper: running run_atlas (--nthreads 12)
[2025-04-20 02:24:45] Arguments: --nthreads 12
[2025-04-20 02:24:45] Threads: 12
[2025-04-20 02:24:45] Checking for CVMFS
[2025-04-20 02:24:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-20 02:24:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-20 02:24:45] Running cvmfs_config stat atlas.cern.ch
[2025-04-20 02:24:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-20 02:24:45] 2.12.7.0 2534634 21199 273812 145056 2 188 31817755 46080000 6275 130560 0 208300107 99.938 37467112 4485 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-04-20 02:24:45] CVMFS is ok
[2025-04-20 02:24:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-20 02:24:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-20 02:24:45] Further information can be found at the LHC@home message board.
[2025-04-20 02:24:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-20 02:24:45] Checking for apptainer binary...
[2025-04-20 02:24:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-20 02:24:45] Running /usr/bin/apptainer --version
[2025-04-20 02:24:45] apptainer version 1.4.0-1.el9
[2025-04-20 02:24:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-20 02:24:45] mff2103.farm.particle.cz
[2025-04-20 02:24:45] apptainer works
[2025-04-20 02:24:45] Set ATHENA_PROC_NUMBER=12
[2025-04-20 02:24:45] Set ATHENA_CORE_NUMBER=12
[2025-04-20 02:24:45] Starting ATLAS job with PandaID=6607871693
[2025-04-20 02:24:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-20 03:28:27]  *** The last 200 lines of the pilot log: ***
[2025-04-20 03:28:27]  is_tar=False
[2025-04-20 03:28:27]  lfn=log.44075483._084318.job.log.tgz.1
[2025-04-20 03:28:27]  mtime=0
[2025-04-20 03:28:27]  protocol_id=None
[2025-04-20 03:28:27]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-20 03:28:27]  replicas=None
[2025-04-20 03:28:27]  scope=mc23_13p6TeV
[2025-04-20 03:28:27]  status=None
[2025-04-20 03:28:27]  status_code=0
[2025-04-20 03:28:27]  storage_token=
[2025-04-20 03:28:27]  surl=/scratch/.boinc/slots/6/PanDA_Pilot-6607871693/log.44075483._084318.job.log.tgz.1
[2025-04-20 03:28:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/86/67/log.44075483._084318.job.log.tgz.1
[2025-04-20 03:28:27]  workdir=None
[2025-04-20 03:28:27] ]
[2025-04-20 03:28:27] 2025-04-20 01:28:06,120 | INFO     | transferring file log.44075483._084318.job.log.tgz.1 from /scratch/.boinc/slots/6/PanDA_Pilot-6607871693/log.44075483._084318.job.log.tgz.1 to /scratch/.boinc/slot
[2025-04-20 03:28:27] 2025-04-20 01:28:06,120 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/6/PanDA_Pilot-6607871693/log.44075483._084318.job.log.tgz.1 /scratch/.boinc/slots/6/log.44075483._084318.j
[2025-04-20 03:28:27] 2025-04-20 01:28:06,138 | INFO     | adding to output.list: log.44075483._084318.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/86/67/log.44075483._084318.job.log.tg
[2025-04-20 03:28:27] 2025-04-20 01:28:06,138 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-20 03:28:27] 2025-04-20 01:28:06,139 | INFO     | summary of transferred files:
[2025-04-20 03:28:27] 2025-04-20 01:28:06,139 | INFO     |  -- lfn=log.44075483._084318.job.log.tgz.1, status_code=0, status=transferred
[2025-04-20 03:28:27] 2025-04-20 01:28:06,139 | INFO     | stage-out finished correctly
[2025-04-20 03:28:27] 2025-04-20 01:28:07,113 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-20 03:28:27] 2025-04-20 01:28:08,056 | WARNING  | process 3159340 can no longer be monitored (due to stat problems) - aborting
[2025-04-20 03:28:27] 2025-04-20 01:28:08,056 | INFO     | using path: /scratch/.boinc/slots/6/PanDA_Pilot-6607871693/memory_monitor_summary.json (trf name=prmon)
[2025-04-20 03:28:27] 2025-04-20 01:28:08,265 | INFO     | number of running child processes to parent process 3159340: 1
[2025-04-20 03:28:27] 2025-04-20 01:28:08,266 | INFO     | maximum number of monitored processes: 6
[2025-04-20 03:28:27] 2025-04-20 01:28:09,581 | INFO     | job 6607871693 has state=finished
[2025-04-20 03:28:27] 2025-04-20 01:28:09,581 | INFO     | preparing for final server update for job 6607871693 in state='finished'
[2025-04-20 03:28:27] 2025-04-20 01:28:09,582 | INFO     | this job has now completed (state=finished)
[2025-04-20 03:28:27] 2025-04-20 01:28:09,582 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-20 03:28:27] 2025-04-20 01:28:09,582 | INFO     | log transfer has been attempted: DONE
[2025-04-20 03:28:27] 2025-04-20 01:28:09,582 | INFO     | job 6607871693 has finished - writing final server update
[2025-04-20 03:28:27] 2025-04-20 01:28:09,582 | INFO     | total number of processed events: 400 (read)
[2025-04-20 03:28:27] 2025-04-20 01:28:09,589 | INFO     | executing command: lscpu
[2025-04-20 03:28:27] 2025-04-20 01:28:09,656 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-20 03:28:27] 2025-04-20 01:28:10,769 | INFO     | monitor loop #279: job 0:6607871693 is in state 'finished'
[2025-04-20 03:28:27] 2025-04-20 01:28:10,769 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 03:28:27] 2025-04-20 01:28:13,272 | INFO     | monitor loop #280: job 0:6607871693 is in state 'finished'
[2025-04-20 03:28:27] 2025-04-20 01:28:13,273 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 03:28:27] 2025-04-20 01:28:13,534 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-20 03:28:27] 2025-04-20 01:28:13,534 | INFO     | using path: /scratch/.boinc/slots/6/PanDA_Pilot-6607871693/memory_monitor_summary.json (trf name=prmon)
[2025-04-20 03:28:27] 2025-04-20 01:28:13,534 | INFO     | extracted standard info from prmon json
[2025-04-20 03:28:27] 2025-04-20 01:28:13,535 | INFO     | extracted standard memory fields from prmon json
[2025-04-20 03:28:27] 2025-04-20 01:28:13,535 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-20 03:28:27] 2025-04-20 01:28:13,535 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-20 03:28:27] 2025-04-20 01:28:13,536 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-20 03:28:27] 2025-04-20 01:28:13,537 | INFO     | fitting pss+swap vs Time
[2025-04-20 03:28:27] 2025-04-20 01:28:13,537 | INFO     | sum of square deviations: 51573060.0
[2025-04-20 03:28:27] 2025-04-20 01:28:13,537 | INFO     | sum of deviations: 16154903402.000002
[2025-04-20 03:28:27] 2025-04-20 01:28:13,537 | INFO     | mean x: 1745110675.0
[2025-04-20 03:28:27] 2025-04-20 01:28:13,537 | INFO     | mean y: 2526183.090909091
[2025-04-20 03:28:27] 2025-04-20 01:28:13,537 | INFO     | -- intersect: -546641290965.31995
[2025-04-20 03:28:27] 2025-04-20 01:28:13,537 | INFO     | intersect: -546641290965.31995
[2025-04-20 03:28:27] 2025-04-20 01:28:13,538 | INFO     | chi2: 1.6909147752583251
[2025-04-20 03:28:27] 2025-04-20 01:28:13,538 | INFO     | -- intersect: -546641290965.31995
[2025-04-20 03:28:27] 2025-04-20 01:28:13,538 | INFO     | current memory leak: 313.24 B/s (using 55 data points, chi2=1.69)
[2025-04-20 03:28:27] 2025-04-20 01:28:13,538 | INFO     | ..............................
[2025-04-20 03:28:27] 2025-04-20 01:28:13,538 | INFO     | . Timing measurements:
[2025-04-20 03:28:27] 2025-04-20 01:28:13,538 | INFO     | . get job = 0 s
[2025-04-20 03:28:27] 2025-04-20 01:28:13,538 | INFO     | . initial setup = 1 s
[2025-04-20 03:28:27] 2025-04-20 01:28:13,538 | INFO     | . payload setup = 5 s
[2025-04-20 03:28:27] 2025-04-20 01:28:13,539 | INFO     | . stage-in = 0 s
[2025-04-20 03:28:27] 2025-04-20 01:28:13,539 | INFO     | . payload execution = 3762 s
[2025-04-20 03:28:27] 2025-04-20 01:28:13,539 | INFO     | . stage-out = 0 s
[2025-04-20 03:28:27] 2025-04-20 01:28:13,539 | INFO     | . log creation = 0 s
[2025-04-20 03:28:27] 2025-04-20 01:28:13,539 | INFO     | ..............................
[2025-04-20 03:28:27] 2025-04-20 01:28:13,857 | INFO     | 
[2025-04-20 03:28:27] 2025-04-20 01:28:13,858 | INFO     | job summary report
[2025-04-20 03:28:27] 2025-04-20 01:28:13,858 | INFO     | --------------------------------------------------
[2025-04-20 03:28:27] 2025-04-20 01:28:13,858 | INFO     | PanDA job id: 6607871693
[2025-04-20 03:28:27] 2025-04-20 01:28:13,858 | INFO     | task id: 44075483
[2025-04-20 03:28:27] 2025-04-20 01:28:13,858 | INFO     | errors: (none)
[2025-04-20 03:28:27] 2025-04-20 01:28:13,858 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-20 03:28:27] 2025-04-20 01:28:13,858 | INFO     | pilot state: finished 
[2025-04-20 03:28:27] 2025-04-20 01:28:13,858 | INFO     | transexitcode: 0
[2025-04-20 03:28:27] 2025-04-20 01:28:13,858 | INFO     | exeerrorcode: 0
[2025-04-20 03:28:27] 2025-04-20 01:28:13,859 | INFO     | exeerrordiag: 
[2025-04-20 03:28:27] 2025-04-20 01:28:13,859 | INFO     | exitcode: 0
[2025-04-20 03:28:27] 2025-04-20 01:28:13,859 | INFO     | exitmsg: OK
[2025-04-20 03:28:27] 2025-04-20 01:28:13,859 | INFO     | cpuconsumptiontime: 33380 s
[2025-04-20 03:28:27] 2025-04-20 01:28:13,859 | INFO     | nevents: 400
[2025-04-20 03:28:27] 2025-04-20 01:28:13,859 | INFO     | neventsw: 0
[2025-04-20 03:28:27] 2025-04-20 01:28:13,859 | INFO     | pid: 3159340
[2025-04-20 03:28:27] 2025-04-20 01:28:13,859 | INFO     | pgrp: 3159340
[2025-04-20 03:28:27] 2025-04-20 01:28:13,859 | INFO     | corecount: 12
[2025-04-20 03:28:27] 2025-04-20 01:28:13,859 | INFO     | event service: False
[2025-04-20 03:28:27] 2025-04-20 01:28:13,859 | INFO     | sizes: {0: 2426653, 1: 2426852, 5: 2427058, 12: 2427114, 3771: 2452899, 3773: 2461842, 3774: 2462026, 3781: 2462196}
[2025-04-20 03:28:27] 2025-04-20 01:28:13,859 | INFO     | --------------------------------------------------
[2025-04-20 03:28:27] 2025-04-20 01:28:13,859 | INFO     | 
[2025-04-20 03:28:27] 2025-04-20 01:28:13,860 | INFO     | executing command: ls -lF /scratch/.boinc/slots/6
[2025-04-20 03:28:27] 2025-04-20 01:28:13,883 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-20 03:28:27] 2025-04-20 01:28:13,883 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-20 03:28:27] 2025-04-20 01:28:13,883 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-20 03:28:27] 2025-04-20 01:28:13,883 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-20 03:28:27] 2025-04-20 01:28:13,883 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-20 03:28:27] 2025-04-20 01:28:13,883 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-20 03:28:27] 2025-04-20 01:28:13,883 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-20 03:28:27] 2025-04-20 01:28:13,884 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-20 03:28:27] 2025-04-20 01:28:13,884 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-20 03:28:27] 2025-04-20 01:28:13,884 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-20 03:28:27] 2025-04-20 01:28:13,884 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-20 03:28:27] 2025-04-20 01:28:13,884 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-20 03:28:27] 2025-04-20 01:28:13,884 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-20 03:28:27] 2025-04-20 01:28:13,884 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-20 03:28:27] 2025-04-20 01:28:13,884 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-20 03:28:27] 2025-04-20 01:28:13,884 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-20 03:28:27] 2025-04-20 01:28:13,884 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-20 03:28:27] 2025-04-20 01:28:13,884 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-20 03:28:27] 2025-04-20 01:28:13,884 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-20 03:28:27] 2025-04-20 01:28:13,884 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-20 03:28:27] 2025-04-20 01:28:13,884 | INFO     | job 6607871693 has completed (purged errors)
[2025-04-20 03:28:27] 2025-04-20 01:28:13,884 | INFO     | overall cleanup function is called
[2025-04-20 03:28:27] 2025-04-20 01:28:14,892 | INFO     | --- collectZombieJob: --- 10, [3159340]
[2025-04-20 03:28:27] 2025-04-20 01:28:14,893 | INFO     | zombie collector waiting for pid 3159340
[2025-04-20 03:28:27] 2025-04-20 01:28:14,893 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-20 03:28:27] 2025-04-20 01:28:14,893 | INFO     | collected zombie processes
[2025-04-20 03:28:27] 2025-04-20 01:28:14,893 | INFO     | will attempt to kill all subprocesses of pid=3159340
[2025-04-20 03:28:27] 2025-04-20 01:28:15,111 | INFO     | process IDs to be killed: [3159340] (in reverse order)
[2025-04-20 03:28:27] 2025-04-20 01:28:15,196 | WARNING  | found no corresponding commands to process id(s)
[2025-04-20 03:28:27] 2025-04-20 01:28:15,196 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-20 03:28:27] 2025-04-20 01:28:15,209 | INFO     | did not find any defunct processes belonging to 3159340
[2025-04-20 03:28:27] 2025-04-20 01:28:15,218 | INFO     | did not find any defunct processes belonging to 3159340
[2025-04-20 03:28:27] 2025-04-20 01:28:15,218 | INFO     | ready for new job
[2025-04-20 03:28:27] 2025-04-20 01:28:15,218 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-20 03:28:27] 2025-04-20 01:28:15,220 | INFO     | **************************************
[2025-04-20 03:28:27] 2025-04-20 01:28:15,220 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-20 03:28:27] 2025-04-20 01:28:15,220 | INFO     | **************************************
[2025-04-20 03:28:27] 2025-04-20 01:28:15,220 | INFO     | 
[2025-04-20 03:28:27] 2025-04-20 01:28:15,225 | INFO     | architecture information:
[2025-04-20 03:28:27] 2025-04-20 01:28:15,225 | INFO     | executing command: cat /etc/os-release
[2025-04-20 03:28:27] 2025-04-20 01:28:15,240 | INFO     | cat /etc/os-release:
[2025-04-20 03:28:27] NAME="CentOS Linux"
[2025-04-20 03:28:27] VERSION="7 (Core)"
[2025-04-20 03:28:27] ID="centos"
[2025-04-20 03:28:27] ID_LIKE="rhel fedora"
[2025-04-20 03:28:27] VERSION_ID="7"
[2025-04-20 03:28:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-20 03:28:27] ANSI_COLOR="0;31"
[2025-04-20 03:28:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-20 03:28:27] HOME_URL="https://www.centos.org/"
[2025-04-20 03:28:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-20 03:28:27] 
[2025-04-20 03:28:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-20 03:28:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-20 03:28:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-20 03:28:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-20 03:28:27] 
[2025-04-20 03:28:27] 2025-04-20 01:28:15,240 | INFO     | **************************************
[2025-04-20 03:28:27] 2025-04-20 01:28:15,743 | INFO     | executing command: df -mP /scratch/.boinc/slots/6
[2025-04-20 03:28:27] 2025-04-20 01:28:15,764 | INFO     | sufficient remaining disk space (1681114791936 B)
[2025-04-20 03:28:27] 2025-04-20 01:28:15,764 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-20 03:28:27] 2025-04-20 01:28:15,764 | INFO     | current server update state: UPDATING_FINAL
[2025-04-20 03:28:27] 2025-04-20 01:28:15,764 | INFO     | update_server=False
[2025-04-20 03:28:27] 2025-04-20 01:28:15,764 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-20 03:28:27] 2025-04-20 01:28:15,776 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-20 03:28:27] 2025-04-20 01:28:15,777 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-20 03:28:27] 2025-04-20 01:28:15,777 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-20 03:28:27] 2025-04-20 01:28:15,777 | INFO     | will abort loop
[2025-04-20 03:28:27] 2025-04-20 01:28:16,354 | INFO     | all payload control threads have been joined
[2025-04-20 03:28:27] 2025-04-20 01:28:16,424 | INFO     | all job control threads have been joined
[2025-04-20 03:28:27] 2025-04-20 01:28:16,499 | INFO     | found 0 job(s) in 20 queues
[2025-04-20 03:28:27] 2025-04-20 01:28:16,500 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-20 03:28:27] 2025-04-20 01:28:16,500 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-20 03:28:27] 2025-04-20 01:28:16,716 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-20 03:28:27] 2025-04-20 01:28:16,770 | INFO     | [job] retrieve thread has finished
[2025-04-20 03:28:27] 2025-04-20 01:28:16,782 | INFO     | [job] job monitor thread has finished
[2025-04-20 03:28:27] 2025-04-20 01:28:16,792 | INFO     | [payload] validate_pre thread has finished
[2025-04-20 03:28:27] 2025-04-20 01:28:16,855 | INFO     | all data control threads have been joined
[2025-04-20 03:28:27] 2025-04-20 01:28:17,293 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-20 03:28:27] 2025-04-20 01:28:17,301 | INFO     | [payload] execute_payloads thread has finished
[2025-04-20 03:28:27] 2025-04-20 01:28:17,360 | INFO     | [payload] control thread has finished
[2025-04-20 03:28:27] 2025-04-20 01:28:17,429 | INFO     | [job] control thread has finished
[2025-04-20 03:28:27] 2025-04-20 01:28:17,713 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-20 03:28:27] 2025-04-20 01:28:17,754 | INFO     | [job] validate thread has finished
[2025-04-20 03:28:27] 2025-04-20 01:28:17,857 | INFO     | [data] control thread has finished
[2025-04-20 03:28:27] 2025-04-20 01:28:18,099 | INFO     | [data] copytool_in thread has finished
[2025-04-20 03:28:27] 2025-04-20 01:28:18,168 | INFO     | [payload] validate_post thread has finished
[2025-04-20 03:28:27] 2025-04-20 01:28:18,189 | INFO     | [job] create_data_payload thread has finished
[2025-04-20 03:28:27] 2025-04-20 01:28:18,274 | INFO     | [payload] failed_post thread has finished
[2025-04-20 03:28:27] 2025-04-20 01:28:18,617 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-20 03:28:27] 2025-04-20 01:28:18,721 | INFO     | [data] copytool_out thread has finished
[2025-04-20 03:28:27] 2025-04-20 01:28:19,618 | INFO     | [job] queue monitor thread has finished
[2025-04-20 03:28:27] 2025-04-20 01:28:21,719 | INFO     | [data] queue_monitor thread has finished
[2025-04-20 03:28:27] 2025-04-20 01:28:22,613 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139746051118912)>', '<ExcThread(monitor, started 139745418016512)>']
[2025-04-20 03:28:27] 2025-04-20 01:28:23,535 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-20 03:28:27] 2025-04-20 01:28:23,536 | INFO     | [monitor] control thread has ended
[2025-04-20 03:28:27] 2025-04-20 01:28:27,639 | INFO     | all workflow threads have been joined
[2025-04-20 03:28:27] 2025-04-20 01:28:27,639 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-20 03:28:27] 2025-04-20 01:28:27,639 | INFO     | traces error code: 0
[2025-04-20 03:28:27] 2025-04-20 01:28:27,640 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-20 03:28:27] 2025-04-20 01:28:27,764 [wrapper] ==== pilot stdout END ====
[2025-04-20 03:28:27] 2025-04-20 01:28:27,767 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-20 03:28:27] 2025-04-20 01:28:27,770 [wrapper] pilotpid: 3151690
[2025-04-20 03:28:27] 2025-04-20 01:28:27,772 [wrapper] Pilot exit status: 0
[2025-04-20 03:28:27] 2025-04-20 01:28:27,783 [wrapper] pandaids: 6607871693
[2025-04-20 03:28:27] 2025-04-20 01:28:27,839 [wrapper] cleanup supervisor_pilot 3365482 3151691
[2025-04-20 03:28:27] 2025-04-20 01:28:27,842 [wrapper] Test setup, not cleaning
[2025-04-20 03:28:27] 2025-04-20 01:28:27,844 [wrapper] apfmon messages muted
[2025-04-20 03:28:27] 2025-04-20 01:28:27,847 [wrapper] ==== wrapper stdout END ====
[2025-04-20 03:28:27] 2025-04-20 01:28:27,849 [wrapper] ==== wrapper stderr END ====
[2025-04-20 03:28:27]  *** Error codes and diagnostics ***
[2025-04-20 03:28:27]     "exeErrorCode": 0,
[2025-04-20 03:28:27]     "exeErrorDiag": "",
[2025-04-20 03:28:27]     "pilotErrorCode": 0,
[2025-04-20 03:28:27]     "pilotErrorDiag": "",
[2025-04-20 03:28:27]  *** Listing of results directory ***
[2025-04-20 03:28:27] total 417880
[2025-04-20 03:28:27] -rw-r--r-- 1 boinc boinc    495897 Apr 19 16:33 pilot3.tar.gz
[2025-04-20 03:28:27] -rw-r--r-- 1 boinc boinc      5111 Apr 19 16:53 queuedata.json
[2025-04-20 03:28:27] -rwx------ 1 boinc boinc     37140 Apr 19 16:54 runpilot2-wrapper.sh
[2025-04-20 03:28:27] -rw-r--r-- 1 boinc boinc       100 Apr 20 02:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-20 03:28:27] -rwxr-xr-x 1 boinc boinc      7986 Apr 20 02:24 run_atlas
[2025-04-20 03:28:27] -rw-r--r-- 1 boinc boinc       105 Apr 20 02:24 job.xml
[2025-04-20 03:28:27] -rw-r--r-- 2 boinc boinc 223402195 Apr 20 02:24 EVNT.44075481._003268.pool.root.1
[2025-04-20 03:28:27] -rw-r--r-- 1 boinc boinc      6654 Apr 20 02:24 init_data.xml
[2025-04-20 03:28:27] -rw-r--r-- 2 boinc boinc     17569 Apr 20 02:24 start_atlas.sh
[2025-04-20 03:28:27] drwxrwx--x 2 boinc boinc      4096 Apr 20 02:24 shared
[2025-04-20 03:28:27] -rw-r--r-- 2 boinc boinc    508889 Apr 20 02:24 input.tar.gz
[2025-04-20 03:28:27] -rw-r--r-- 1 boinc boinc         0 Apr 20 02:24 boinc_lockfile
[2025-04-20 03:28:27] -rw-r--r-- 1 boinc boinc      2578 Apr 20 02:24 pandaJob.out
[2025-04-20 03:28:27] -rw------- 1 boinc boinc       424 Apr 20 02:24 setup.sh.local
[2025-04-20 03:28:27] -rw------- 1 boinc boinc    991300 Apr 20 02:24 agis_schedconf.cvmfs.json
[2025-04-20 03:28:27] -rw------- 1 boinc boinc   1618536 Apr 20 02:24 agis_ddmendpoints.agis.ALL.json
[2025-04-20 03:28:27] drwx------ 4 boinc boinc      4096 Apr 20 02:24 pilot3
[2025-04-20 03:28:27] -rw-r--r-- 1 boinc boinc       530 Apr 20 03:27 boinc_task_state.xml
[2025-04-20 03:28:27] -rw------- 1 boinc boinc 199165755 Apr 20 03:27 HITS.44075483._084318.pool.root.1
[2025-04-20 03:28:27] -rw------- 1 boinc boinc      1035 Apr 20 03:28 memory_monitor_summary.json
[2025-04-20 03:28:27] -rw------- 1 boinc boinc    355662 Apr 20 03:28 log.44075483._084318.job.log.tgz.1
[2025-04-20 03:28:27] -rw------- 1 boinc boinc      7695 Apr 20 03:28 heartbeat.json
[2025-04-20 03:28:27] -rw------- 1 boinc boinc        95 Apr 20 03:28 pilot_heartbeat.json
[2025-04-20 03:28:27] -rw-r--r-- 1 boinc boinc      8192 Apr 20 03:28 boinc_mmap_file
[2025-04-20 03:28:27] -rw-r--r-- 1 boinc boinc        27 Apr 20 03:28 wrapper_checkpoint.txt
[2025-04-20 03:28:27] -rw------- 1 boinc boinc      4542 Apr 20 03:28 pilotlog.txt
[2025-04-20 03:28:27] -rw------- 1 boinc boinc    383642 Apr 20 03:28 log.44075483._084318.job.log.1
[2025-04-20 03:28:27] -rw------- 1 boinc boinc       357 Apr 20 03:28 output.list
[2025-04-20 03:28:27] -rw-r--r-- 1 boinc boinc       620 Apr 20 03:28 runtime_log
[2025-04-20 03:28:27] -rw------- 1 boinc boinc    757760 Apr 20 03:28 result.tar.gz
[2025-04-20 03:28:27] -rw-r--r-- 1 boinc boinc     11078 Apr 20 03:28 runtime_log.err
[2025-04-20 03:28:27] -rw------- 1 boinc boinc       662 Apr 20 03:28 OvbNDmHlOQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm4AiLDmDdYSJn.diag
[2025-04-20 03:28:27] -rw-r--r-- 1 boinc boinc     21548 Apr 20 03:28 stderr.txt
[2025-04-20 03:28:27] HITS file was successfully produced:
[2025-04-20 03:28:27] -rw------- 1 boinc boinc 199165755 Apr 20 03:27 shared/HITS.pool.root.1
[2025-04-20 03:28:27]  *** Contents of shared directory: ***
[2025-04-20 03:28:27] total 413932
[2025-04-20 03:28:27] -rw-r--r-- 2 boinc boinc 223402195 Apr 20 02:24 ATLAS.root_0
[2025-04-20 03:28:27] -rw-r--r-- 2 boinc boinc     17569 Apr 20 02:24 start_atlas.sh
[2025-04-20 03:28:27] -rw-r--r-- 2 boinc boinc    508889 Apr 20 02:24 input.tar.gz
[2025-04-20 03:28:27] -rw------- 1 boinc boinc 199165755 Apr 20 03:27 HITS.pool.root.1
[2025-04-20 03:28:27] -rw------- 1 boinc boinc    757760 Apr 20 03:28 result.tar.gz
03:28:29 (3147649): run_atlas exited; CPU time 33454.400906
03:28:29 (3147649): called boinc_finish(0)

</stderr_txt>
]]>

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