Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:57:21 (578): wrapper (7.7.26015): starting
16:57:21 (578): wrapper: running run_atlas (--nthreads 12)
[2025-04-19 16:57:21] Arguments: --nthreads 12
[2025-04-19 16:57:21] Threads: 12
[2025-04-19 16:57:21] Checking for CVMFS
[2025-04-19 16:57:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 16:57:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 16:57:22] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 16:57:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 16:57:22] 2.11.2.0 2994 219200 165852 145050 3 58 11758486 20275201 1 130560 0 25044805 99.953 8428819 49654 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-19 16:57:22] CVMFS is ok
[2025-04-19 16:57:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 16:57:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 16:57:22] Further information can be found at the LHC@home message board.
[2025-04-19 16:57:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 16:57:22] Checking for apptainer binary...
[2025-04-19 16:57:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 16:57:22] Running /usr/bin/apptainer --version
[2025-04-19 16:57:22] apptainer version 1.3.2-1.el7
[2025-04-19 16:57:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 16:57:23] c-205-21.aglt2.org
[2025-04-19 16:57:23] apptainer works
[2025-04-19 16:57:23] Set ATHENA_PROC_NUMBER=12
[2025-04-19 16:57:23] Set ATHENA_CORE_NUMBER=12
[2025-04-19 16:57:23] Starting ATLAS job with PandaID=6607790428
[2025-04-19 16:57:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 18:21:12]  *** The last 200 lines of the pilot log: ***
[2025-04-19 18:21:12]  guid=95a00fb1-6ac1-4876-9b57-34d51380106b
[2025-04-19 18:21:12]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-19 18:21:12]  is_altstaged=None
[2025-04-19 18:21:12]  is_tar=False
[2025-04-19 18:21:12]  lfn=log.44075483._083555.job.log.tgz.1
[2025-04-19 18:21:12]  mtime=0
[2025-04-19 18:21:12]  protocol_id=None
[2025-04-19 18:21:12]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-19 18:21:12]  replicas=None
[2025-04-19 18:21:12]  scope=mc23_13p6TeV
[2025-04-19 18:21:12]  status=None
[2025-04-19 18:21:12]  status_code=0
[2025-04-19 18:21:12]  storage_token=
[2025-04-19 18:21:12]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6607790428/log.44075483._083555.job.log.tgz.1
[2025-04-19 18:21:12]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/81/89/log.44075483._083555.job.log.tgz.1
[2025-04-19 18:21:12]  workdir=None
[2025-04-19 18:21:12] ]
[2025-04-19 18:21:12] 2025-04-19 22:20:49,031 | INFO     | transferring file log.44075483._083555.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6607790428/log.44075483._083555.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-19 18:21:12] 2025-04-19 22:20:49,032 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6607790428/log.44075483._083555.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075483._083555.job
[2025-04-19 18:21:12] 2025-04-19 22:20:49,054 | INFO     | adding to output.list: log.44075483._083555.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/81/89/log.44075483._083555.job.log.tg
[2025-04-19 18:21:12] 2025-04-19 22:20:49,055 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-19 18:21:12] 2025-04-19 22:20:49,055 | INFO     | summary of transferred files:
[2025-04-19 18:21:12] 2025-04-19 22:20:49,055 | INFO     |  -- lfn=log.44075483._083555.job.log.tgz.1, status_code=0, status=transferred
[2025-04-19 18:21:12] 2025-04-19 22:20:49,055 | INFO     | stage-out finished correctly
[2025-04-19 18:21:12] 2025-04-19 22:20:50,721 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-19 18:21:12] 2025-04-19 22:20:50,976 | INFO     | monitor loop #373: job 0:6607790428 is in state 'finished'
[2025-04-19 18:21:12] 2025-04-19 22:20:50,976 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 18:21:12] 2025-04-19 22:20:52,175 | INFO     | job 6607790428 has state=finished
[2025-04-19 18:21:12] 2025-04-19 22:20:52,176 | INFO     | preparing for final server update for job 6607790428 in state='finished'
[2025-04-19 18:21:12] 2025-04-19 22:20:52,176 | INFO     | this job has now completed (state=finished)
[2025-04-19 18:21:12] 2025-04-19 22:20:52,176 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-19 18:21:12] 2025-04-19 22:20:52,177 | INFO     | log transfer has been attempted: DONE
[2025-04-19 18:21:12] 2025-04-19 22:20:52,177 | INFO     | job 6607790428 has finished - writing final server update
[2025-04-19 18:21:12] 2025-04-19 22:20:52,177 | INFO     | total number of processed events: 400 (read)
[2025-04-19 18:21:12] 2025-04-19 22:20:52,179 | INFO     | executing command: lscpu
[2025-04-19 18:21:12] 2025-04-19 22:20:52,206 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-19 18:21:12] 2025-04-19 22:20:53,479 | INFO     | monitor loop #374: job 0:6607790428 is in state 'finished'
[2025-04-19 18:21:12] 2025-04-19 22:20:53,479 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 18:21:12] 2025-04-19 22:20:55,982 | INFO     | monitor loop #375: job 0:6607790428 is in state 'finished'
[2025-04-19 18:21:12] 2025-04-19 22:20:55,982 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 18:21:12] 2025-04-19 22:20:56,969 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-19 18:21:12] 2025-04-19 22:20:56,969 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6607790428/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 18:21:12] 2025-04-19 22:20:56,970 | INFO     | extracted standard info from prmon json
[2025-04-19 18:21:12] 2025-04-19 22:20:56,970 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 18:21:12] 2025-04-19 22:20:56,970 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 18:21:12] 2025-04-19 22:20:56,971 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 18:21:12] 2025-04-19 22:20:56,971 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 18:21:12] 2025-04-19 22:20:56,973 | INFO     | fitting pss+swap vs Time
[2025-04-19 18:21:12] 2025-04-19 22:20:56,973 | INFO     | sum of square deviations: 130793150.0
[2025-04-19 18:21:12] 2025-04-19 22:20:56,974 | INFO     | sum of deviations: 23847417714.0
[2025-04-19 18:21:12] 2025-04-19 22:20:56,974 | INFO     | mean x: 1745098848.0
[2025-04-19 18:21:12] 2025-04-19 22:20:56,974 | INFO     | mean y: 2527810.24
[2025-04-19 18:21:12] 2025-04-19 22:20:56,974 | INFO     | -- intersect: -318180046586.63165
[2025-04-19 18:21:12] 2025-04-19 22:20:56,974 | INFO     | intersect: -318180046586.63165
[2025-04-19 18:21:12] 2025-04-19 22:20:56,974 | INFO     | chi2: 1.716782206384718
[2025-04-19 18:21:12] 2025-04-19 22:20:56,974 | INFO     | -- intersect: -318180046586.63165
[2025-04-19 18:21:12] 2025-04-19 22:20:56,975 | INFO     | current memory leak: 182.33 B/s (using 75 data points, chi2=1.72)
[2025-04-19 18:21:12] 2025-04-19 22:20:56,975 | INFO     | ..............................
[2025-04-19 18:21:12] 2025-04-19 22:20:56,975 | INFO     | . Timing measurements:
[2025-04-19 18:21:12] 2025-04-19 22:20:56,975 | INFO     | . get job = 0 s
[2025-04-19 18:21:12] 2025-04-19 22:20:56,975 | INFO     | . initial setup = 2 s
[2025-04-19 18:21:12] 2025-04-19 22:20:56,975 | INFO     | . payload setup = 7 s
[2025-04-19 18:21:12] 2025-04-19 22:20:56,975 | INFO     | . stage-in = 0 s
[2025-04-19 18:21:12] 2025-04-19 22:20:56,975 | INFO     | . payload execution = 4963 s
[2025-04-19 18:21:12] 2025-04-19 22:20:56,976 | INFO     | . stage-out = 0 s
[2025-04-19 18:21:12] 2025-04-19 22:20:56,976 | INFO     | . log creation = 0 s
[2025-04-19 18:21:12] 2025-04-19 22:20:56,976 | INFO     | ..............................
[2025-04-19 18:21:12] 2025-04-19 22:20:57,060 | INFO     | 
[2025-04-19 18:21:12] 2025-04-19 22:20:57,060 | INFO     | job summary report
[2025-04-19 18:21:12] 2025-04-19 22:20:57,060 | INFO     | --------------------------------------------------
[2025-04-19 18:21:12] 2025-04-19 22:20:57,060 | INFO     | PanDA job id: 6607790428
[2025-04-19 18:21:12] 2025-04-19 22:20:57,060 | INFO     | task id: 44075483
[2025-04-19 18:21:12] 2025-04-19 22:20:57,060 | INFO     | errors: (none)
[2025-04-19 18:21:12] 2025-04-19 22:20:57,061 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 18:21:12] 2025-04-19 22:20:57,061 | INFO     | pilot state: finished 
[2025-04-19 18:21:12] 2025-04-19 22:20:57,061 | INFO     | transexitcode: 0
[2025-04-19 18:21:12] 2025-04-19 22:20:57,061 | INFO     | exeerrorcode: 0
[2025-04-19 18:21:12] 2025-04-19 22:20:57,061 | INFO     | exeerrordiag: 
[2025-04-19 18:21:12] 2025-04-19 22:20:57,061 | INFO     | exitcode: 0
[2025-04-19 18:21:12] 2025-04-19 22:20:57,061 | INFO     | exitmsg: OK
[2025-04-19 18:21:12] 2025-04-19 22:20:57,061 | INFO     | cpuconsumptiontime: 46489 s
[2025-04-19 18:21:12] 2025-04-19 22:20:57,061 | INFO     | nevents: 400
[2025-04-19 18:21:12] 2025-04-19 22:20:57,062 | INFO     | neventsw: 0
[2025-04-19 18:21:12] 2025-04-19 22:20:57,062 | INFO     | pid: 10772
[2025-04-19 18:21:12] 2025-04-19 22:20:57,062 | INFO     | pgrp: 10772
[2025-04-19 18:21:12] 2025-04-19 22:20:57,062 | INFO     | corecount: 12
[2025-04-19 18:21:12] 2025-04-19 22:20:57,062 | INFO     | event service: False
[2025-04-19 18:21:12] 2025-04-19 22:20:57,062 | INFO     | sizes: {0: 2426596, 1: 2426851, 6: 2427057, 12: 2427085, 4975: 2453234, 4976: 2462175, 4978: 2462359, 4984: 2462529}
[2025-04-19 18:21:12] 2025-04-19 22:20:57,062 | INFO     | --------------------------------------------------
[2025-04-19 18:21:12] 2025-04-19 22:20:57,062 | INFO     | 
[2025-04-19 18:21:12] 2025-04-19 22:20:57,062 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-19 18:21:12] 2025-04-19 22:20:57,085 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 18:21:12] 2025-04-19 22:20:57,085 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 18:21:12] 2025-04-19 22:20:57,085 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 18:21:12] 2025-04-19 22:20:57,085 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 18:21:12] 2025-04-19 22:20:57,086 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 18:21:12] 2025-04-19 22:20:57,086 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 18:21:12] 2025-04-19 22:20:57,086 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 18:21:12] 2025-04-19 22:20:57,086 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 18:21:12] 2025-04-19 22:20:57,086 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 18:21:12] 2025-04-19 22:20:57,086 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 18:21:12] 2025-04-19 22:20:57,087 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 18:21:12] 2025-04-19 22:20:57,087 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 18:21:12] 2025-04-19 22:20:57,087 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 18:21:12] 2025-04-19 22:20:57,087 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 18:21:12] 2025-04-19 22:20:57,087 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 18:21:12] 2025-04-19 22:20:57,088 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 18:21:12] 2025-04-19 22:20:57,088 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 18:21:12] 2025-04-19 22:20:57,088 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 18:21:12] 2025-04-19 22:20:57,088 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 18:21:12] 2025-04-19 22:20:57,088 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 18:21:12] 2025-04-19 22:20:57,088 | INFO     | job 6607790428 has completed (purged errors)
[2025-04-19 18:21:12] 2025-04-19 22:20:57,089 | INFO     | overall cleanup function is called
[2025-04-19 18:21:12] 2025-04-19 22:20:58,097 | INFO     | --- collectZombieJob: --- 10, [10772]
[2025-04-19 18:21:12] 2025-04-19 22:20:58,097 | INFO     | zombie collector waiting for pid 10772
[2025-04-19 18:21:12] 2025-04-19 22:20:58,097 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 18:21:12] 2025-04-19 22:20:58,098 | INFO     | collected zombie processes
[2025-04-19 18:21:12] 2025-04-19 22:20:58,098 | INFO     | will attempt to kill all subprocesses of pid=10772
[2025-04-19 18:21:12] 2025-04-19 22:20:58,187 | INFO     | process IDs to be killed: [10772] (in reverse order)
[2025-04-19 18:21:12] 2025-04-19 22:20:58,239 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 18:21:12] 2025-04-19 22:20:58,240 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 18:21:12] 2025-04-19 22:20:58,243 | INFO     | did not find any defunct processes belonging to 10772
[2025-04-19 18:21:12] 2025-04-19 22:20:58,245 | INFO     | did not find any defunct processes belonging to 10772
[2025-04-19 18:21:12] 2025-04-19 22:20:58,245 | INFO     | ready for new job
[2025-04-19 18:21:12] 2025-04-19 22:20:58,245 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 18:21:12] 2025-04-19 22:20:58,246 | INFO     | **************************************
[2025-04-19 18:21:12] 2025-04-19 22:20:58,246 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 18:21:12] 2025-04-19 22:20:58,246 | INFO     | **************************************
[2025-04-19 18:21:12] 2025-04-19 22:20:58,246 | INFO     | 
[2025-04-19 18:21:12] 2025-04-19 22:20:58,247 | INFO     | architecture information:
[2025-04-19 18:21:12] 2025-04-19 22:20:58,247 | INFO     | executing command: cat /etc/os-release
[2025-04-19 18:21:12] 2025-04-19 22:20:58,261 | INFO     | cat /etc/os-release:
[2025-04-19 18:21:12] NAME="CentOS Linux"
[2025-04-19 18:21:12] VERSION="7 (Core)"
[2025-04-19 18:21:12] ID="centos"
[2025-04-19 18:21:12] ID_LIKE="rhel fedora"
[2025-04-19 18:21:12] VERSION_ID="7"
[2025-04-19 18:21:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 18:21:12] ANSI_COLOR="0;31"
[2025-04-19 18:21:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 18:21:12] HOME_URL="https://www.centos.org/"
[2025-04-19 18:21:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 18:21:12] 
[2025-04-19 18:21:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 18:21:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 18:21:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 18:21:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 18:21:12] 
[2025-04-19 18:21:12] 2025-04-19 22:20:58,262 | INFO     | **************************************
[2025-04-19 18:21:12] 2025-04-19 22:20:58,765 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-19 18:21:12] 2025-04-19 22:20:58,781 | INFO     | sufficient remaining disk space (29391585280 B)
[2025-04-19 18:21:12] 2025-04-19 22:20:58,781 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 18:21:12] 2025-04-19 22:20:58,782 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 18:21:12] 2025-04-19 22:20:58,782 | INFO     | update_server=False
[2025-04-19 18:21:12] 2025-04-19 22:20:58,782 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 18:21:12] 2025-04-19 22:20:58,783 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 18:21:12] 2025-04-19 22:20:58,783 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-19 18:21:12] 2025-04-19 22:20:58,783 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 18:21:12] 2025-04-19 22:20:58,784 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 18:21:12] 2025-04-19 22:20:58,784 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 18:21:12] 2025-04-19 22:20:59,384 | INFO     | all payload control threads have been joined
[2025-04-19 18:21:12] 2025-04-19 22:20:59,492 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 18:21:12] 2025-04-19 22:20:59,492 | INFO     | aborting loop
[2025-04-19 18:21:12] 2025-04-19 22:20:59,656 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 18:21:12] 2025-04-19 22:20:59,673 | INFO     | all data control threads have been joined
[2025-04-19 18:21:12] 2025-04-19 22:20:59,788 | INFO     | [job] retrieve thread has finished
[2025-04-19 18:21:12] 2025-04-19 22:20:59,788 | INFO     | [job] queue monitor thread has finished
[2025-04-19 18:21:12] 2025-04-19 22:20:59,888 | INFO     | [payload] failed_post thread has finished
[2025-04-19 18:21:12] 2025-04-19 22:20:59,937 | INFO     | [data] copytool_in thread has finished
[2025-04-19 18:21:12] 2025-04-19 22:21:00,380 | INFO     | all job control threads have been joined
[2025-04-19 18:21:12] 2025-04-19 22:21:00,389 | INFO     | [payload] control thread has finished
[2025-04-19 18:21:12] 2025-04-19 22:21:00,437 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 18:21:12] 2025-04-19 22:21:00,497 | INFO     | [job] job monitor thread has finished
[2025-04-19 18:21:12] 2025-04-19 22:21:00,536 | INFO     | [job] validate thread has finished
[2025-04-19 18:21:12] 2025-04-19 22:21:00,555 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 18:21:12] 2025-04-19 22:21:00,679 | INFO     | [data] control thread has finished
[2025-04-19 18:21:12] 2025-04-19 22:21:00,689 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 18:21:12] 2025-04-19 22:21:00,698 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 18:21:12] 2025-04-19 22:21:01,314 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 18:21:12] 2025-04-19 22:21:01,345 | INFO     | [payload] validate_post thread has finished
[2025-04-19 18:21:12] 2025-04-19 22:21:01,386 | INFO     | [job] control thread has finished
[2025-04-19 18:21:12] 2025-04-19 22:21:01,661 | INFO     | [data] copytool_out thread has finished
[2025-04-19 18:21:12] 2025-04-19 22:21:05,320 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 18:21:12] 2025-04-19 22:21:07,425 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140439004067648)>', '<ExcThread(monitor, started 140438434469632)>']
[2025-04-19 18:21:12] 2025-04-19 22:21:07,827 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 18:21:12] 2025-04-19 22:21:07,827 | INFO     | [monitor] control thread has ended
[2025-04-19 18:21:12] 2025-04-19 22:21:12,433 | INFO     | all workflow threads have been joined
[2025-04-19 18:21:12] 2025-04-19 22:21:12,433 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 18:21:12] 2025-04-19 22:21:12,447 | INFO     | traces error code: 0
[2025-04-19 18:21:12] 2025-04-19 22:21:12,447 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 18:21:12] 2025-04-19 22:21:12,533 [wrapper] ==== pilot stdout END ====
[2025-04-19 18:21:12] 2025-04-19 22:21:12,536 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 18:21:12] 2025-04-19 22:21:12,540 [wrapper] pilotpid: 4334
[2025-04-19 18:21:12] 2025-04-19 22:21:12,544 [wrapper] Pilot exit status: 0
[2025-04-19 18:21:12] 2025-04-19 22:21:12,560 [wrapper] pandaids: 6607790428
[2025-04-19 18:21:12] 2025-04-19 22:21:12,596 [wrapper] cleanup supervisor_pilot 18355 4335
[2025-04-19 18:21:12] 2025-04-19 22:21:12,600 [wrapper] Test setup, not cleaning
[2025-04-19 18:21:12] 2025-04-19 22:21:12,604 [wrapper] apfmon messages muted
[2025-04-19 18:21:12] 2025-04-19 22:21:12,608 [wrapper] ==== wrapper stdout END ====
[2025-04-19 18:21:12] 2025-04-19 22:21:12,612 [wrapper] ==== wrapper stderr END ====
[2025-04-19 18:21:12]  *** Error codes and diagnostics ***
[2025-04-19 18:21:12]     "exeErrorCode": 0,
[2025-04-19 18:21:12]     "exeErrorDiag": "",
[2025-04-19 18:21:12]     "pilotErrorCode": 0,
[2025-04-19 18:21:12]     "pilotErrorDiag": "",
[2025-04-19 18:21:12]  *** Listing of results directory ***
[2025-04-19 18:21:12] total 417936
[2025-04-19 18:21:12] -rw-r--r-- 1 boincer umatlas    495897 Apr 19 09:20 pilot3.tar.gz
[2025-04-19 18:21:12] -rwx------ 1 boincer umatlas     37140 Apr 19 09:37 runpilot2-wrapper.sh
[2025-04-19 18:21:12] -rw-r--r-- 1 boincer umatlas      5111 Apr 19 09:37 queuedata.json
[2025-04-19 18:21:12] -rw-r--r-- 1 boincer umatlas       100 Apr 19 16:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 18:21:12] -rwxr-xr-x 1 boincer umatlas      7986 Apr 19 16:57 run_atlas
[2025-04-19 18:21:12] -rw-r--r-- 1 boincer umatlas       105 Apr 19 16:57 job.xml
[2025-04-19 18:21:12] -rw-r--r-- 2 boincer umatlas 223962275 Apr 19 16:57 EVNT.44075481._003240.pool.root.1
[2025-04-19 18:21:12] -rw-r--r-- 2 boincer umatlas     17569 Apr 19 16:57 start_atlas.sh
[2025-04-19 18:21:12] drwxrwx--x 2 boincer umatlas      4096 Apr 19 16:57 shared
[2025-04-19 18:21:12] -rw-r--r-- 2 boincer umatlas    508893 Apr 19 16:57 input.tar.gz
[2025-04-19 18:21:12] -rw-r--r-- 1 boincer umatlas         0 Apr 19 16:57 boinc_lockfile
[2025-04-19 18:21:12] -rw-r--r-- 1 boincer umatlas      2578 Apr 19 16:57 pandaJob.out
[2025-04-19 18:21:12] -rw------- 1 boincer umatlas       424 Apr 19 16:57 setup.sh.local
[2025-04-19 18:21:12] -rw------- 1 boincer umatlas    991284 Apr 19 16:57 agis_schedconf.cvmfs.json
[2025-04-19 18:21:12] -rw------- 1 boincer umatlas   1618536 Apr 19 16:57 agis_ddmendpoints.agis.ALL.json
[2025-04-19 18:21:12] drwx------ 4 boincer umatlas      4096 Apr 19 16:57 pilot3
[2025-04-19 18:21:12] -rw------- 1 boincer umatlas 198453173 Apr 19 18:20 HITS.44075483._083555.pool.root.1
[2025-04-19 18:21:12] -rw-r--r-- 1 boincer umatlas       529 Apr 19 18:20 boinc_task_state.xml
[2025-04-19 18:21:12] -rw-r--r-- 1 boincer umatlas      5868 Apr 19 18:20 init_data.xml
[2025-04-19 18:21:12] -rw------- 1 boincer umatlas        95 Apr 19 18:20 pilot_heartbeat.json
[2025-04-19 18:21:12] -rw------- 1 boincer umatlas      1049 Apr 19 18:20 memory_monitor_summary.json
[2025-04-19 18:21:12] -rw------- 1 boincer umatlas    369550 Apr 19 18:20 log.44075483._083555.job.log.tgz.1
[2025-04-19 18:21:12] -rw-r--r-- 1 boincer umatlas      8192 Apr 19 18:20 boinc_mmap_file
[2025-04-19 18:21:12] -rw-r--r-- 1 boincer umatlas        27 Apr 19 18:20 wrapper_checkpoint.txt
[2025-04-19 18:21:12] -rw------- 1 boincer umatlas      7754 Apr 19 18:20 heartbeat.json
[2025-04-19 18:21:12] -rw------- 1 boincer umatlas      4476 Apr 19 18:21 pilotlog.txt
[2025-04-19 18:21:12] -rw------- 1 boincer umatlas    473786 Apr 19 18:21 log.44075483._083555.job.log.1
[2025-04-19 18:21:12] -rw------- 1 boincer umatlas       357 Apr 19 18:21 output.list
[2025-04-19 18:21:12] -rw-r--r-- 1 boincer umatlas       620 Apr 19 18:21 runtime_log
[2025-04-19 18:21:12] -rw------- 1 boincer umatlas    860160 Apr 19 18:21 result.tar.gz
[2025-04-19 18:21:12] -rw------- 1 boincer umatlas       658 Apr 19 18:21 u1iMDmoYNQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm02hLDmjZlMEn.diag
[2025-04-19 18:21:12] -rw-r--r-- 1 boincer umatlas     11015 Apr 19 18:21 runtime_log.err
[2025-04-19 18:21:12] -rw-r--r-- 1 boincer umatlas     21304 Apr 19 18:21 stderr.txt
[2025-04-19 18:21:12] HITS file was successfully produced:
[2025-04-19 18:21:12] -rw------- 1 boincer umatlas 198453173 Apr 19 18:20 shared/HITS.pool.root.1
[2025-04-19 18:21:12]  *** Contents of shared directory: ***
[2025-04-19 18:21:12] total 413884
[2025-04-19 18:21:12] -rw-r--r-- 2 boincer umatlas 223962275 Apr 19 16:57 ATLAS.root_0
[2025-04-19 18:21:12] -rw-r--r-- 2 boincer umatlas     17569 Apr 19 16:57 start_atlas.sh
[2025-04-19 18:21:12] -rw-r--r-- 2 boincer umatlas    508893 Apr 19 16:57 input.tar.gz
[2025-04-19 18:21:12] -rw------- 1 boincer umatlas 198453173 Apr 19 18:20 HITS.pool.root.1
[2025-04-19 18:21:12] -rw------- 1 boincer umatlas    860160 Apr 19 18:21 result.tar.gz
18:21:14 (578): run_atlas exited; CPU time 46474.440817
18:21:14 (578): called boinc_finish(0)

</stderr_txt>
]]>

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