Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-20 05:40:56 (5396): Detected: vboxwrapper 26206
2025-04-20 05:40:56 (5396): Detected: BOINC client v7.24.1
2025-04-20 05:40:57 (5396): Detected: VirtualBox VboxManage Interface (Version: 7.0.10)
2025-04-20 05:40:58 (5396): Successfully copied 'init_data.xml' to the shared directory.
2025-04-20 05:40:58 (5396): Create VM. (boinc_d7a446d9b7c6ec18, slot#6)
2025-04-20 05:40:59 (5396): Setting Memory Size for VM. (4800MB)
2025-04-20 05:40:59 (5396): Setting CPU Count for VM. (8)
2025-04-20 05:40:59 (5396): Setting Chipset Options for VM.
2025-04-20 05:41:00 (5396): Setting Graphics Controller Options for VM.
2025-04-20 05:41:00 (5396): Setting Boot Options for VM.
2025-04-20 05:41:00 (5396): Setting Network Configuration for NAT.
2025-04-20 05:41:00 (5396): Enabling VM Network Access.
2025-04-20 05:41:01 (5396): Disabling USB Support for VM.
2025-04-20 05:41:01 (5396): Disabling COM Port Support for VM.
2025-04-20 05:41:01 (5396): Disabling LPT Port Support for VM.
2025-04-20 05:41:02 (5396): Disabling Audio Support for VM.
2025-04-20 05:41:02 (5396): Disabling Clipboard Support for VM.
2025-04-20 05:41:02 (5396): Disabling Drag and Drop Support for VM.
2025-04-20 05:41:02 (5396): Adding storage controller(s) to VM.
2025-04-20 05:41:03 (5396): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-20 05:41:06 (5396): Adding VirtualBox Guest Additions to VM.
2025-04-20 05:41:06 (5396): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-20 05:41:06 (5396): forwarding host port 56310 to guest port 80
2025-04-20 05:41:06 (5396): Enabling remote desktop for VM.
2025-04-20 05:41:07 (5396): Required extension pack not installed, remote desktop not enabled.
2025-04-20 05:41:07 (5396): Enabling shared directory for VM.
2025-04-20 05:41:07 (5396): Starting VM using VBoxManage interface. (boinc_d7a446d9b7c6ec18, slot#6)
2025-04-20 05:41:16 (5396): Successfully started VM. (PID = '6672')
2025-04-20 05:41:16 (5396): Reporting VM Process ID to BOINC.
2025-04-20 05:41:16 (5396): Guest Log: BIOS: VirtualBox 7.0.10
2025-04-20 05:41:16 (5396): Guest Log: CPUID EDX: 0x178bfbff
2025-04-20 05:41:16 (5396): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-20 05:41:16 (5396): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-20 05:41:16 (5396): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-20 05:41:16 (5396): Detected: Web Application Enabled (http://localhost:56310)
2025-04-20 05:41:16 (5396): Preference change detected
2025-04-20 05:41:16 (5396): Setting CPU throttle for VM. (100%)
2025-04-20 05:41:16 (5396): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-20 05:41:18 (5396): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-20 05:41:18 (5396): Guest Log: BIOS: Booting from Hard Disk...
2025-04-20 05:41:21 (5396): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-20 05:41:21 (5396): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-20 05:41:21 (5396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-20 05:41:21 (5396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-20 05:41:21 (5396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-20 05:41:21 (5396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-20 05:41:21 (5396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-20 05:41:21 (5396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-20 05:41:21 (5396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-20 05:41:21 (5396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-20 05:41:21 (5396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-20 05:41:21 (5396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-20 05:41:21 (5396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-20 05:41:21 (5396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-20 05:41:21 (5396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-20 05:41:21 (5396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-20 05:41:21 (5396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-20 05:41:21 (5396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-20 05:41:21 (5396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-20 05:41:21 (5396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-20 05:41:21 (5396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-20 05:41:21 (5396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-20 05:41:21 (5396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-20 05:41:21 (5396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-20 05:41:21 (5396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-20 05:41:21 (5396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-20 05:41:21 (5396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-20 05:41:21 (5396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-20 05:41:21 (5396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-20 05:41:21 (5396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-20 05:41:21 (5396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-20 05:41:21 (5396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-20 05:41:27 (5396): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-20 05:41:27 (5396): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-20 05:41:31 (5396): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-20 05:41:31 (5396): Guest Log: 00:00:00.000101 main     Log opened 2025-04-20T05:41:29.510644000Z
2025-04-20 05:41:31 (5396): Guest Log: 00:00:00.000161 main     OS Product: Linux
2025-04-20 05:41:31 (5396): Guest Log: 00:00:00.000182 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-20 05:41:31 (5396): Guest Log: 00:00:00.000198 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-20 05:41:31 (5396): Guest Log: 00:00:00.000214 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-20 05:41:31 (5396): Guest Log: 00:00:00.000214 main     Process ID: 1368
2025-04-20 05:41:31 (5396): Guest Log: 00:00:00.000215 main     Package type: LINUX_64BITS_GENERIC
2025-04-20 05:41:31 (5396): Guest Log: 00:00:00.002022 main     5.2.32 r132073 started. Verbose level = 0
2025-04-20 05:41:31 (5396): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-20 05:41:31 (5396): Guest Log: [INFO] Mounting shared directory
2025-04-20 05:41:31 (5396): Guest Log: [INFO] Checking for init_data.xml
2025-04-20 05:41:41 (5396): Guest Log: 00:00:10.004833 timesync vgsvcTimeSyncWorker: Radical guest time change: -32 388 032 627 000ns (GuestNow=1 745 095 301 481 359 000 ns GuestLast=1 745 127 689 513 986 000 ns fSetTimeLastLoop=true )
2025-04-20 05:41:48 (5396): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-20 05:41:48 (5396): Guest Log: [INFO] Detected branch: prod
2025-04-20 05:41:49 (5396): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-20 05:41:49 (5396): Guest Log: Copying input files
2025-04-20 05:41:50 (5396): Guest Log: Copied input files into RunAtlas.
2025-04-20 05:41:50 (5396): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-20 05:41:50 (5396): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-20 05:41:50 (5396): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-20 05:41:50 (5396): Guest Log: Further information can be found at the LHC@home message board.
2025-04-20 05:42:03 (5396): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-20 05:42:03 (5396): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-20 05:42:03 (5396): Guest Log: 2.6.3.0 1649 0 32196 145050 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-20 05:42:03 (5396): Guest Log: copied the webapp to /var/www
2025-04-20 05:42:03 (5396): Guest Log: ATHENA_PROC_NUMBER=8
2025-04-20 05:42:03 (5396): Guest Log: ATHENA_CORE_NUMBER=8
2025-04-20 05:42:04 (5396): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-20 05:42:04 (5396): Guest Log:  *** Starting ATLAS job. (PandaID=6607986152 taskID=44075483) ***
2025-04-20 07:22:12 (5396): Status Report: Elapsed Time: '6000.000000'
2025-04-20 07:22:12 (5396): Status Report: CPU Time: '37773.218750'
2025-04-20 08:12:25 (5396): Guest Log:  *** Job finished ***
2025-04-20 08:12:25 (5396): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-20 08:12:25 (5396): Guest Log: 2025-04-19 23:12:10,053 | INFO     | [data] queue_monitor thread has finished
2025-04-20 08:12:25 (5396): Guest Log: 2025-04-19 23:12:16,486 | INFO     | job.realtimelogging is not enabled
2025-04-20 08:12:25 (5396): Guest Log: 2025-04-19 23:12:17,536 | INFO     | [payload] run_realtimelog thread has finished
2025-04-20 08:12:25 (5396): Guest Log: 2025-04-19 23:12:19,478 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140342262159168)>', '<ExcThread(monitor, started 140341579593472)>']
2025-04-20 08:12:25 (5396): Guest Log: 2025-04-19 23:12:19,857 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-20 08:12:25 (5396): Guest Log: 2025-04-19 23:12:19,857 | INFO     | [monitor] control thread has ended
2025-04-20 08:12:25 (5396): Guest Log: 2025-04-19 23:12:24,479 | INFO     | all workflow threads have been joined
2025-04-20 08:12:25 (5396): Guest Log: 2025-04-19 23:12:24,479 | INFO     | end of generic workflow (traces error code: 0)
2025-04-20 08:12:25 (5396): Guest Log: 2025-04-19 23:12:24,479 | INFO     | traces error code: 0
2025-04-20 08:12:25 (5396): Guest Log: 2025-04-19 23:12:24,479 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-20 08:12:25 (5396): Guest Log: 2025-04-19 23:12:24,539 [wrapper] ==== pilot stdout END ====
2025-04-20 08:12:25 (5396): Guest Log: 2025-04-19 23:12:24,543 [wrapper] ==== wrapper stdout RESUME ====
2025-04-20 08:12:25 (5396): Guest Log: 2025-04-19 23:12:24,546 [wrapper] pilotpid: 6029
2025-04-20 08:12:25 (5396): Guest Log: 2025-04-19 23:12:24,549 [wrapper] Pilot exit status: 0
2025-04-20 08:12:25 (5396): Guest Log: 2025-04-19 23:12:24,715 [wrapper] pandaids: 6607986152
2025-04-20 08:12:25 (5396): Guest Log: 2025-04-19 23:12:24,742 [wrapper] cleanup supervisor_pilot  4674 6030
2025-04-20 08:12:25 (5396): Guest Log: 2025-04-19 23:12:24,747 [wrapper] Test setup, not cleaning
2025-04-20 08:12:25 (5396): Guest Log: 2025-04-19 23:12:24,764 [wrapper] apfmon messages muted
2025-04-20 08:12:25 (5396): Guest Log: 2025-04-19 23:12:24,769 [wrapper] ==== wrapper stdout END ====
2025-04-20 08:12:25 (5396): Guest Log: 2025-04-19 23:12:24,773 [wrapper] ==== wrapper stderr END ====
2025-04-20 08:12:25 (5396): Guest Log:  *** Error codes and diagnostics ***
2025-04-20 08:12:25 (5396): Guest Log:     "exeErrorCode": 0,
2025-04-20 08:12:25 (5396): Guest Log:     "exeErrorDiag": "",
2025-04-20 08:12:25 (5396): Guest Log:     "pilotErrorCode": 0,
2025-04-20 08:12:25 (5396): Guest Log:     "pilotErrorDiag": "",
2025-04-20 08:12:25 (5396): Guest Log:  *** Listing of results directory ***
2025-04-20 08:12:25 (5396): Guest Log: total 204908
2025-04-20 08:12:25 (5396): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 19 17:08 pilot3.tar.gz
2025-04-20 08:12:25 (5396): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 19 17:34 queuedata.json
2025-04-20 08:12:25 (5396): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 19 17:34 runpilot2-wrapper.sh
2025-04-20 08:12:25 (5396): Guest Log: -rwxr-xr-x. 1 atlas atlas      6092 Apr 19 20:41 init_data.xml
2025-04-20 08:12:25 (5396): Guest Log: -rwxr-xr-x. 1 atlas atlas    508894 Apr 19 20:41 input.tar.gz
2025-04-20 08:12:25 (5396): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr 19 20:41 start_atlas.sh
2025-04-20 08:12:25 (5396): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 19 20:41 EVNT.44075481._003340.pool.root.1 -> /data/./ATLAS.root_0
2025-04-20 08:12:25 (5396): Guest Log: -rw-r--r--. 1 atlas atlas      2579 Apr 19 20:42 pandaJob.out
2025-04-20 08:12:25 (5396): Guest Log: -rw-------. 1 atlas atlas       424 Apr 19 20:42 setup.sh.local
2025-04-20 08:12:25 (5396): Guest Log: -rw-------. 1 atlas atlas    991284 Apr 19 20:45 agis_schedconf.cvmfs.json
2025-04-20 08:12:25 (5396): Guest Log: -rw-------. 1 atlas atlas   1618536 Apr 19 20:45 agis_ddmendpoints.agis.ALL.json
2025-04-20 08:12:25 (5396): Guest Log: drwx------. 4 atlas atlas      4096 Apr 19 20:45 pilot3
2025-04-20 08:12:25 (5396): Guest Log: -rw-------. 1 atlas atlas 203878791 Apr 19 23:11 HITS.44075483._086159.pool.root.1
2025-04-20 08:12:25 (5396): Guest Log: -rw-------. 1 atlas atlas        95 Apr 19 23:11 pilot_heartbeat.json
2025-04-20 08:12:25 (5396): Guest Log: -rw-------. 1 atlas atlas      1044 Apr 19 23:11 memory_monitor_summary.json
2025-04-20 08:12:25 (5396): Guest Log: -rw-------. 1 atlas atlas    335486 Apr 19 23:11 log.44075483._086159.job.log.tgz.1
2025-04-20 08:12:25 (5396): Guest Log: -rw-------. 1 atlas atlas      7732 Apr 19 23:12 heartbeat.json
2025-04-20 08:12:25 (5396): Guest Log: -rw-------. 1 atlas atlas      4485 Apr 19 23:12 pilotlog.txt
2025-04-20 08:12:25 (5396): Guest Log: -rw-------. 1 atlas atlas    740899 Apr 19 23:12 log.44075483._086159.job.log.1
2025-04-20 08:12:25 (5396): Guest Log: -rw-------. 1 atlas atlas       357 Apr 19 23:12 output.list
2025-04-20 08:12:25 (5396): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 19 23:12 runtime_log
2025-04-20 08:12:25 (5396): Guest Log: -rw-------. 1 atlas atlas   1095680 Apr 19 23:12 result.tar.gz
2025-04-20 08:12:25 (5396): Guest Log: -rw-------. 1 atlas atlas       659 Apr 19 23:12 U6gLDmYGRQ7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmcn6KDmu1ZuVo.diag
2025-04-20 08:12:25 (5396): Guest Log: -rw-r--r--. 1 atlas atlas     10953 Apr 19 23:12 runtime_log.err
2025-04-20 08:12:25 (5396): Guest Log: Looking for outputfile HITS.44075483._086159.pool.root.1
2025-04-20 08:12:25 (5396): Guest Log: HITS file was successfully produced
2025-04-20 08:12:25 (5396): Guest Log: -rw-------. 1 atlas atlas 203878791 Apr 19 23:11 /home/atlas/RunAtlas/HITS.44075483._086159.pool.root.1
2025-04-20 08:12:26 (5396): Guest Log: Successfully finished the ATLAS job!
2025-04-20 08:12:26 (5396): Guest Log: Copying the results back to the shared directory!
2025-04-20 08:12:26 (5396): Guest Log:  *** Contents of shared directory: ***
2025-04-20 08:12:26 (5396): Guest Log: total 418724
2025-04-20 08:12:26 (5396): Guest Log: -rwxrwxrwx. 1 root root 223250939 Apr 19 20:40 ATLAS.root_0
2025-04-20 08:12:26 (5396): Guest Log: -rwxrwxrwx. 1 root root 203878791 Apr 19 23:12 HITS.pool.root.1
2025-04-20 08:12:26 (5396): Guest Log: -rwxrwxrwx. 1 root root      6092 Apr 19 20:40 init_data.xml
2025-04-20 08:12:26 (5396): Guest Log: -rwxrwxrwx. 1 root root    508894 Apr 19 20:40 input.tar.gz
2025-04-20 08:12:26 (5396): Guest Log: -rwxrwxrwx. 1 root root   1095680 Apr 19 23:12 result.tar.gz
2025-04-20 08:12:26 (5396): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 19 20:40 start_atlas.sh
2025-04-20 08:12:26 (5396): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-20 08:12:26 (5396): VM Completion File Detected.
2025-04-20 08:12:26 (5396): Powering off VM.
2025-04-20 08:12:27 (5396): Successfully stopped VM.
2025-04-20 08:12:27 (5396): Deregistering VM. (boinc_d7a446d9b7c6ec18, slot#6)
2025-04-20 08:12:27 (5396): Removing network bandwidth throttle group from VM.
2025-04-20 08:12:27 (5396): Removing VM from VirtualBox.
08:12:32 (5396): called boinc_finish(0)

</stderr_txt>
]]>

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