Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:19:07 (2848782): wrapper (7.7.26015): starting
01:19:07 (2848782): wrapper: running run_atlas (--nthreads 12)
[2025-04-20 01:19:07] Arguments: --nthreads 12
[2025-04-20 01:19:07] Threads: 12
[2025-04-20 01:19:07] Checking for CVMFS
[2025-04-20 01:19:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-20 01:19:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-20 01:19:08] Running cvmfs_config stat atlas.cern.ch
[2025-04-20 01:19:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-20 01:19:08] 2.12.7.0 2534634 21133 264452 145055 0 56 31805331 46080000 5068 130560 0 207611337 99.938 37465931 4486 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-04-20 01:19:08] CVMFS is ok
[2025-04-20 01:19:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-20 01:19:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-20 01:19:08] Further information can be found at the LHC@home message board.
[2025-04-20 01:19:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-20 01:19:08] Checking for apptainer binary...
[2025-04-20 01:19:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-20 01:19:08] Running /usr/bin/apptainer --version
[2025-04-20 01:19:08] apptainer version 1.4.0-1.el9
[2025-04-20 01:19:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-20 01:19:08] mff2103.farm.particle.cz
[2025-04-20 01:19:08] apptainer works
[2025-04-20 01:19:08] Set ATHENA_PROC_NUMBER=12
[2025-04-20 01:19:08] Set ATHENA_CORE_NUMBER=12
[2025-04-20 01:19:08] Starting ATLAS job with PandaID=6600415643
[2025-04-20 01:19:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-20 02:18:33]  *** The last 200 lines of the pilot log: ***
[2025-04-20 02:18:33]  mtime=0
[2025-04-20 02:18:33]  protocol_id=None
[2025-04-20 02:18:33]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-20 02:18:33]  replicas=None
[2025-04-20 02:18:33]  scope=mc23_13p6TeV
[2025-04-20 02:18:33]  status=None
[2025-04-20 02:18:33]  status_code=0
[2025-04-20 02:18:33]  storage_token=
[2025-04-20 02:18:33]  surl=/scratch/.boinc/slots/6/PanDA_Pilot-6600415643/log.44075164._042553.job.log.tgz.1
[2025-04-20 02:18:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/45/56/log.44075164._042553.job.log.tgz.1
[2025-04-20 02:18:33]  workdir=None
[2025-04-20 02:18:33] ]
[2025-04-20 02:18:33] 2025-04-20 00:18:05,959 | INFO     | transferring file log.44075164._042553.job.log.tgz.1 from /scratch/.boinc/slots/6/PanDA_Pilot-6600415643/log.44075164._042553.job.log.tgz.1 to /scratch/.boinc/slot
[2025-04-20 02:18:33] 2025-04-20 00:18:05,959 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/6/PanDA_Pilot-6600415643/log.44075164._042553.job.log.tgz.1 /scratch/.boinc/slots/6/log.44075164._042553.j
[2025-04-20 02:18:33] 2025-04-20 00:18:06,042 | INFO     | adding to output.list: log.44075164._042553.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/45/56/log.44075164._042553.job.log.tg
[2025-04-20 02:18:33] 2025-04-20 00:18:06,043 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-20 02:18:33] 2025-04-20 00:18:06,043 | INFO     | summary of transferred files:
[2025-04-20 02:18:33] 2025-04-20 00:18:06,043 | INFO     |  -- lfn=log.44075164._042553.job.log.tgz.1, status_code=0, status=transferred
[2025-04-20 02:18:33] 2025-04-20 00:18:06,044 | INFO     | stage-out finished correctly
[2025-04-20 02:18:33] 2025-04-20 00:18:06,138 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-20 02:18:33] 2025-04-20 00:18:07,217 | WARNING  | process 2865411 can no longer be monitored (due to stat problems) - aborting
[2025-04-20 02:18:33] 2025-04-20 00:18:07,217 | INFO     | using path: /scratch/.boinc/slots/6/PanDA_Pilot-6600415643/memory_monitor_summary.json (trf name=prmon)
[2025-04-20 02:18:33] 2025-04-20 00:18:07,574 | INFO     | number of running child processes to parent process 2865411: 1
[2025-04-20 02:18:33] 2025-04-20 00:18:07,594 | INFO     | maximum number of monitored processes: 6
[2025-04-20 02:18:33] 2025-04-20 00:18:09,131 | INFO     | job 6600415643 has state=finished
[2025-04-20 02:18:33] 2025-04-20 00:18:09,131 | INFO     | preparing for final server update for job 6600415643 in state='finished'
[2025-04-20 02:18:33] 2025-04-20 00:18:09,131 | INFO     | this job has now completed (state=finished)
[2025-04-20 02:18:33] 2025-04-20 00:18:09,132 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-20 02:18:33] 2025-04-20 00:18:09,132 | INFO     | log transfer has been attempted: DONE
[2025-04-20 02:18:33] 2025-04-20 00:18:09,132 | INFO     | job 6600415643 has finished - writing final server update
[2025-04-20 02:18:33] 2025-04-20 00:18:09,132 | INFO     | total number of processed events: 400 (read)
[2025-04-20 02:18:33] 2025-04-20 00:18:09,140 | INFO     | executing command: lscpu
[2025-04-20 02:18:33] 2025-04-20 00:18:09,232 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-20 02:18:33] 2025-04-20 00:18:10,098 | INFO     | monitor loop #261: job 0:6600415643 is in state 'finished'
[2025-04-20 02:18:33] 2025-04-20 00:18:10,098 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 02:18:33] 2025-04-20 00:18:12,602 | INFO     | monitor loop #262: job 0:6600415643 is in state 'finished'
[2025-04-20 02:18:33] 2025-04-20 00:18:12,602 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 02:18:33] 2025-04-20 00:18:13,891 | INFO     | PID=2852818 has CPU usage=13.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-04-20 02:18:33] 2025-04-20 00:18:13,891 | INFO     | .. there are 8 such processes running
[2025-04-20 02:18:33] 2025-04-20 00:18:14,262 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-20 02:18:33] 2025-04-20 00:18:14,262 | INFO     | using path: /scratch/.boinc/slots/6/PanDA_Pilot-6600415643/memory_monitor_summary.json (trf name=prmon)
[2025-04-20 02:18:33] 2025-04-20 00:18:14,263 | INFO     | extracted standard info from prmon json
[2025-04-20 02:18:33] 2025-04-20 00:18:14,263 | INFO     | extracted standard memory fields from prmon json
[2025-04-20 02:18:33] 2025-04-20 00:18:14,263 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-20 02:18:33] 2025-04-20 00:18:14,264 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-20 02:18:33] 2025-04-20 00:18:14,264 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-20 02:18:33] 2025-04-20 00:18:14,265 | INFO     | fitting pss+swap vs Time
[2025-04-20 02:18:33] 2025-04-20 00:18:14,265 | INFO     | sum of square deviations: 41117050.0
[2025-04-20 02:18:33] 2025-04-20 00:18:14,266 | INFO     | sum of deviations: 13692427037.000002
[2025-04-20 02:18:33] 2025-04-20 00:18:14,266 | INFO     | mean x: 1745106616.0
[2025-04-20 02:18:33] 2025-04-20 00:18:14,266 | INFO     | mean y: 2553319.529411765
[2025-04-20 02:18:33] 2025-04-20 00:18:14,266 | INFO     | -- intersect: -581137022874.9198
[2025-04-20 02:18:33] 2025-04-20 00:18:14,266 | INFO     | intersect: -581137022874.9198
[2025-04-20 02:18:33] 2025-04-20 00:18:14,266 | INFO     | chi2: 1.6675905082575417
[2025-04-20 02:18:33] 2025-04-20 00:18:14,266 | INFO     | -- intersect: -581137022874.9198
[2025-04-20 02:18:33] 2025-04-20 00:18:14,266 | INFO     | current memory leak: 333.01 B/s (using 51 data points, chi2=1.67)
[2025-04-20 02:18:33] 2025-04-20 00:18:14,267 | INFO     | ..............................
[2025-04-20 02:18:33] 2025-04-20 00:18:14,267 | INFO     | . Timing measurements:
[2025-04-20 02:18:33] 2025-04-20 00:18:14,267 | INFO     | . get job = 0 s
[2025-04-20 02:18:33] 2025-04-20 00:18:14,267 | INFO     | . initial setup = 1 s
[2025-04-20 02:18:33] 2025-04-20 00:18:14,267 | INFO     | . payload setup = 6 s
[2025-04-20 02:18:33] 2025-04-20 00:18:14,267 | INFO     | . stage-in = 0 s
[2025-04-20 02:18:33] 2025-04-20 00:18:14,267 | INFO     | . payload execution = 3501 s
[2025-04-20 02:18:33] 2025-04-20 00:18:14,267 | INFO     | . stage-out = 0 s
[2025-04-20 02:18:33] 2025-04-20 00:18:14,267 | INFO     | . log creation = 0 s
[2025-04-20 02:18:33] 2025-04-20 00:18:14,267 | INFO     | ..............................
[2025-04-20 02:18:33] 2025-04-20 00:18:14,365 | INFO     | 
[2025-04-20 02:18:33] 2025-04-20 00:18:14,366 | INFO     | job summary report
[2025-04-20 02:18:33] 2025-04-20 00:18:14,366 | INFO     | --------------------------------------------------
[2025-04-20 02:18:33] 2025-04-20 00:18:14,366 | INFO     | PanDA job id: 6600415643
[2025-04-20 02:18:33] 2025-04-20 00:18:14,366 | INFO     | task id: 44075164
[2025-04-20 02:18:33] 2025-04-20 00:18:14,366 | INFO     | errors: (none)
[2025-04-20 02:18:33] 2025-04-20 00:18:14,366 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-20 02:18:33] 2025-04-20 00:18:14,366 | INFO     | pilot state: finished 
[2025-04-20 02:18:33] 2025-04-20 00:18:14,366 | INFO     | transexitcode: 0
[2025-04-20 02:18:33] 2025-04-20 00:18:14,366 | INFO     | exeerrorcode: 0
[2025-04-20 02:18:33] 2025-04-20 00:18:14,367 | INFO     | exeerrordiag: 
[2025-04-20 02:18:33] 2025-04-20 00:18:14,367 | INFO     | exitcode: 0
[2025-04-20 02:18:33] 2025-04-20 00:18:14,367 | INFO     | exitmsg: OK
[2025-04-20 02:18:33] 2025-04-20 00:18:14,367 | INFO     | cpuconsumptiontime: 31625 s
[2025-04-20 02:18:33] 2025-04-20 00:18:14,367 | INFO     | nevents: 400
[2025-04-20 02:18:33] 2025-04-20 00:18:14,367 | INFO     | neventsw: 0
[2025-04-20 02:18:33] 2025-04-20 00:18:14,367 | INFO     | pid: 2865411
[2025-04-20 02:18:33] 2025-04-20 00:18:14,367 | INFO     | pgrp: 2865411
[2025-04-20 02:18:33] 2025-04-20 00:18:14,367 | INFO     | corecount: 12
[2025-04-20 02:18:33] 2025-04-20 00:18:14,367 | INFO     | event service: False
[2025-04-20 02:18:33] 2025-04-20 00:18:14,367 | INFO     | sizes: {0: 2426785, 4: 2426991, 11: 2427019, 3511: 2452715, 3512: 2461714, 3520: 2461828}
[2025-04-20 02:18:33] 2025-04-20 00:18:14,367 | INFO     | --------------------------------------------------
[2025-04-20 02:18:33] 2025-04-20 00:18:14,368 | INFO     | 
[2025-04-20 02:18:33] 2025-04-20 00:18:14,368 | INFO     | executing command: ls -lF /scratch/.boinc/slots/6
[2025-04-20 02:18:33] 2025-04-20 00:18:14,396 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-20 02:18:33] 2025-04-20 00:18:14,397 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-20 02:18:33] 2025-04-20 00:18:14,397 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-20 02:18:33] 2025-04-20 00:18:14,397 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-20 02:18:33] 2025-04-20 00:18:14,397 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-20 02:18:33] 2025-04-20 00:18:14,397 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-20 02:18:33] 2025-04-20 00:18:14,397 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-20 02:18:33] 2025-04-20 00:18:14,397 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-20 02:18:33] 2025-04-20 00:18:14,397 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-20 02:18:33] 2025-04-20 00:18:14,397 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-20 02:18:33] 2025-04-20 00:18:14,397 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-20 02:18:33] 2025-04-20 00:18:14,398 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-20 02:18:33] 2025-04-20 00:18:14,398 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-20 02:18:33] 2025-04-20 00:18:14,398 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-20 02:18:33] 2025-04-20 00:18:14,398 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-20 02:18:33] 2025-04-20 00:18:14,398 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-20 02:18:33] 2025-04-20 00:18:14,398 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-20 02:18:33] 2025-04-20 00:18:14,398 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-20 02:18:33] 2025-04-20 00:18:14,398 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-20 02:18:33] 2025-04-20 00:18:14,398 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-20 02:18:33] 2025-04-20 00:18:14,398 | INFO     | job 6600415643 has completed (purged errors)
[2025-04-20 02:18:33] 2025-04-20 00:18:14,399 | INFO     | overall cleanup function is called
[2025-04-20 02:18:33] 2025-04-20 00:18:15,408 | INFO     | --- collectZombieJob: --- 10, [2865411]
[2025-04-20 02:18:33] 2025-04-20 00:18:15,409 | INFO     | zombie collector waiting for pid 2865411
[2025-04-20 02:18:33] 2025-04-20 00:18:15,409 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-20 02:18:33] 2025-04-20 00:18:15,409 | INFO     | collected zombie processes
[2025-04-20 02:18:33] 2025-04-20 00:18:15,409 | INFO     | will attempt to kill all subprocesses of pid=2865411
[2025-04-20 02:18:33] 2025-04-20 00:18:15,766 | INFO     | process IDs to be killed: [2865411] (in reverse order)
[2025-04-20 02:18:33] 2025-04-20 00:18:15,878 | WARNING  | found no corresponding commands to process id(s)
[2025-04-20 02:18:33] 2025-04-20 00:18:15,878 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-20 02:18:33] 2025-04-20 00:18:15,890 | INFO     | did not find any defunct processes belonging to 2865411
[2025-04-20 02:18:33] 2025-04-20 00:18:15,901 | INFO     | did not find any defunct processes belonging to 2865411
[2025-04-20 02:18:33] 2025-04-20 00:18:15,901 | INFO     | ready for new job
[2025-04-20 02:18:33] 2025-04-20 00:18:15,901 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-20 02:18:33] 2025-04-20 00:18:15,903 | INFO     | **************************************
[2025-04-20 02:18:33] 2025-04-20 00:18:15,903 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-20 02:18:33] 2025-04-20 00:18:15,903 | INFO     | **************************************
[2025-04-20 02:18:33] 2025-04-20 00:18:15,903 | INFO     | 
[2025-04-20 02:18:33] 2025-04-20 00:18:15,909 | INFO     | architecture information:
[2025-04-20 02:18:33] 2025-04-20 00:18:15,910 | INFO     | executing command: cat /etc/os-release
[2025-04-20 02:18:33] 2025-04-20 00:18:15,931 | INFO     | cat /etc/os-release:
[2025-04-20 02:18:33] NAME="CentOS Linux"
[2025-04-20 02:18:33] VERSION="7 (Core)"
[2025-04-20 02:18:33] ID="centos"
[2025-04-20 02:18:33] ID_LIKE="rhel fedora"
[2025-04-20 02:18:33] VERSION_ID="7"
[2025-04-20 02:18:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-20 02:18:33] ANSI_COLOR="0;31"
[2025-04-20 02:18:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-20 02:18:33] HOME_URL="https://www.centos.org/"
[2025-04-20 02:18:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-20 02:18:33] 
[2025-04-20 02:18:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-20 02:18:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-20 02:18:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-20 02:18:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-20 02:18:33] 
[2025-04-20 02:18:33] 2025-04-20 00:18:15,931 | INFO     | **************************************
[2025-04-20 02:18:33] 2025-04-20 00:18:16,434 | INFO     | executing command: df -mP /scratch/.boinc/slots/6
[2025-04-20 02:18:33] 2025-04-20 00:18:16,457 | INFO     | sufficient remaining disk space (1680792879104 B)
[2025-04-20 02:18:33] 2025-04-20 00:18:16,457 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-20 02:18:33] 2025-04-20 00:18:16,457 | INFO     | current server update state: UPDATING_FINAL
[2025-04-20 02:18:33] 2025-04-20 00:18:16,457 | INFO     | update_server=False
[2025-04-20 02:18:33] 2025-04-20 00:18:16,457 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-20 02:18:33] 2025-04-20 00:18:16,458 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-20 02:18:33] 2025-04-20 00:18:16,458 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-20 02:18:33] 2025-04-20 00:18:16,459 | INFO     | aborting loop
[2025-04-20 02:18:33] 2025-04-20 00:18:16,459 | INFO     | found 0 job(s) in 20 queues
[2025-04-20 02:18:33] 2025-04-20 00:18:16,460 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-20 02:18:33] 2025-04-20 00:18:16,460 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-20 02:18:33] 2025-04-20 00:18:16,655 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-20 02:18:33] 2025-04-20 00:18:16,735 | INFO     | all data control threads have been joined
[2025-04-20 02:18:33] 2025-04-20 00:18:16,747 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-20 02:18:33] 2025-04-20 00:18:16,832 | INFO     | all job control threads have been joined
[2025-04-20 02:18:33] 2025-04-20 00:18:17,233 | INFO     | all payload control threads have been joined
[2025-04-20 02:18:33] 2025-04-20 00:18:17,463 | INFO     | [job] retrieve thread has finished
[2025-04-20 02:18:33] 2025-04-20 00:18:17,465 | INFO     | [job] job monitor thread has finished
[2025-04-20 02:18:33] 2025-04-20 00:18:17,678 | INFO     | [job] validate thread has finished
[2025-04-20 02:18:33] 2025-04-20 00:18:17,739 | INFO     | [data] control thread has finished
[2025-04-20 02:18:33] 2025-04-20 00:18:17,778 | INFO     | [data] copytool_in thread has finished
[2025-04-20 02:18:33] 2025-04-20 00:18:17,837 | INFO     | [job] control thread has finished
[2025-04-20 02:18:33] 2025-04-20 00:18:17,966 | INFO     | [job] create_data_payload thread has finished
[2025-04-20 02:18:33] 2025-04-20 00:18:18,114 | INFO     | [payload] execute_payloads thread has finished
[2025-04-20 02:18:33] 2025-04-20 00:18:18,197 | INFO     | [payload] validate_pre thread has finished
[2025-04-20 02:18:33] 2025-04-20 00:18:18,237 | INFO     | [payload] control thread has finished
[2025-04-20 02:18:33] 2025-04-20 00:18:18,380 | INFO     | [payload] failed_post thread has finished
[2025-04-20 02:18:33] 2025-04-20 00:18:18,661 | INFO     | [data] copytool_out thread has finished
[2025-04-20 02:18:33] 2025-04-20 00:18:19,009 | INFO     | [payload] validate_post thread has finished
[2025-04-20 02:18:33] 2025-04-20 00:18:19,375 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-20 02:18:33] 2025-04-20 00:18:20,380 | INFO     | [job] queue monitor thread has finished
[2025-04-20 02:18:33] 2025-04-20 00:18:20,754 | INFO     | [data] queue_monitor thread has finished
[2025-04-20 02:18:33] 2025-04-20 00:18:26,525 | INFO     | job.realtimelogging is not enabled
[2025-04-20 02:18:33] 2025-04-20 00:18:27,529 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-20 02:18:33] 2025-04-20 00:18:28,164 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140131308078912)>', '<ExcThread(monitor, started 140130673219328)>']
[2025-04-20 02:18:33] 2025-04-20 00:18:28,522 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-20 02:18:33] 2025-04-20 00:18:28,523 | INFO     | [monitor] control thread has ended
[2025-04-20 02:18:33] 2025-04-20 00:18:33,189 | INFO     | all workflow threads have been joined
[2025-04-20 02:18:33] 2025-04-20 00:18:33,190 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-20 02:18:33] 2025-04-20 00:18:33,190 | INFO     | traces error code: 0
[2025-04-20 02:18:33] 2025-04-20 00:18:33,190 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-20 02:18:33] 2025-04-20 00:18:33,308 [wrapper] ==== pilot stdout END ====
[2025-04-20 02:18:33] 2025-04-20 00:18:33,312 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-20 02:18:33] 2025-04-20 00:18:33,315 [wrapper] pilotpid: 2852818
[2025-04-20 02:18:33] 2025-04-20 00:18:33,319 [wrapper] Pilot exit status: 0
[2025-04-20 02:18:33] 2025-04-20 00:18:33,331 [wrapper] pandaids: 6600415643
[2025-04-20 02:18:33] 2025-04-20 00:18:33,412 [wrapper] cleanup supervisor_pilot 3028002 2852819
[2025-04-20 02:18:33] 2025-04-20 00:18:33,416 [wrapper] Test setup, not cleaning
[2025-04-20 02:18:33] 2025-04-20 00:18:33,419 [wrapper] apfmon messages muted
[2025-04-20 02:18:33] 2025-04-20 00:18:33,422 [wrapper] ==== wrapper stdout END ====
[2025-04-20 02:18:33] 2025-04-20 00:18:33,426 [wrapper] ==== wrapper stderr END ====
[2025-04-20 02:18:33]  *** Error codes and diagnostics ***
[2025-04-20 02:18:33]     "exeErrorCode": 0,
[2025-04-20 02:18:33]     "exeErrorDiag": "",
[2025-04-20 02:18:33]     "pilotErrorCode": 0,
[2025-04-20 02:18:33]     "pilotErrorDiag": "",
[2025-04-20 02:18:33]  *** Listing of results directory ***
[2025-04-20 02:18:33] total 406744
[2025-04-20 02:18:33] -rw-r--r-- 1 boinc boinc      5111 Apr 12 11:26 queuedata.json
[2025-04-20 02:18:33] -rw-r--r-- 1 boinc boinc    495897 Apr 12 11:27 pilot3.tar.gz
[2025-04-20 02:18:33] -rwx------ 1 boinc boinc     37140 Apr 12 11:28 runpilot2-wrapper.sh
[2025-04-20 02:18:33] -rw-r--r-- 1 boinc boinc       100 Apr 20 01:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-20 02:18:33] -rwxr-xr-x 1 boinc boinc      7986 Apr 20 01:19 run_atlas
[2025-04-20 02:18:33] -rw-r--r-- 1 boinc boinc       105 Apr 20 01:19 job.xml
[2025-04-20 02:18:33] -rw-r--r-- 2 boinc boinc 221168435 Apr 20 01:19 EVNT.44075162._001650.pool.root.1
[2025-04-20 02:18:33] -rw-r--r-- 1 boinc boinc      6654 Apr 20 01:19 init_data.xml
[2025-04-20 02:18:33] -rw-r--r-- 2 boinc boinc     17569 Apr 20 01:19 start_atlas.sh
[2025-04-20 02:18:33] drwxrwx--x 2 boinc boinc      4096 Apr 20 01:19 shared
[2025-04-20 02:18:33] -rw-r--r-- 2 boinc boinc    508883 Apr 20 01:19 input.tar.gz
[2025-04-20 02:18:33] -rw-r--r-- 1 boinc boinc         0 Apr 20 01:19 boinc_lockfile
[2025-04-20 02:18:33] -rw-r--r-- 1 boinc boinc      2549 Apr 20 01:19 pandaJob.out
[2025-04-20 02:18:33] -rw------- 1 boinc boinc       424 Apr 20 01:19 setup.sh.local
[2025-04-20 02:18:33] -rw------- 1 boinc boinc    991300 Apr 20 01:19 agis_schedconf.cvmfs.json
[2025-04-20 02:18:33] -rw------- 1 boinc boinc   1618536 Apr 20 01:19 agis_ddmendpoints.agis.ALL.json
[2025-04-20 02:18:33] drwx------ 4 boinc boinc      4096 Apr 20 01:19 pilot3
[2025-04-20 02:18:33] -rw------- 1 boinc boinc        95 Apr 20 02:17 pilot_heartbeat.json
[2025-04-20 02:18:33] -rw------- 1 boinc boinc 190035252 Apr 20 02:17 HITS.44075164._042553.pool.root.1
[2025-04-20 02:18:33] -rw-r--r-- 1 boinc boinc       529 Apr 20 02:17 boinc_task_state.xml
[2025-04-20 02:18:33] -rw------- 1 boinc boinc      1034 Apr 20 02:18 memory_monitor_summary.json
[2025-04-20 02:18:33] -rw------- 1 boinc boinc    359853 Apr 20 02:18 log.44075164._042553.job.log.tgz.1
[2025-04-20 02:18:33] -rw------- 1 boinc boinc      7695 Apr 20 02:18 heartbeat.json
[2025-04-20 02:18:33] -rw-r--r-- 1 boinc boinc      8192 Apr 20 02:18 boinc_mmap_file
[2025-04-20 02:18:33] -rw-r--r-- 1 boinc boinc        27 Apr 20 02:18 wrapper_checkpoint.txt
[2025-04-20 02:18:33] -rw------- 1 boinc boinc      4551 Apr 20 02:18 pilotlog.txt
[2025-04-20 02:18:33] -rw------- 1 boinc boinc    359506 Apr 20 02:18 log.44075164._042553.job.log.1
[2025-04-20 02:18:33] -rw------- 1 boinc boinc       357 Apr 20 02:18 output.list
[2025-04-20 02:18:33] -rw-r--r-- 1 boinc boinc       620 Apr 20 02:18 runtime_log
[2025-04-20 02:18:33] -rw------- 1 boinc boinc    737280 Apr 20 02:18 result.tar.gz
[2025-04-20 02:18:33] -rw-r--r-- 1 boinc boinc     11078 Apr 20 02:18 runtime_log.err
[2025-04-20 02:18:33] -rw------- 1 boinc boinc       662 Apr 20 02:18 D6wLDmsKmN7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmQARLDmnC5CDo.diag
[2025-04-20 02:18:33] -rw-r--r-- 1 boinc boinc     21748 Apr 20 02:18 stderr.txt
[2025-04-20 02:18:33] HITS file was successfully produced:
[2025-04-20 02:18:33] -rw------- 1 boinc boinc 190035252 Apr 20 02:17 shared/HITS.pool.root.1
[2025-04-20 02:18:33]  *** Contents of shared directory: ***
[2025-04-20 02:18:33] total 402816
[2025-04-20 02:18:33] -rw-r--r-- 2 boinc boinc 221168435 Apr 20 01:19 ATLAS.root_0
[2025-04-20 02:18:33] -rw-r--r-- 2 boinc boinc     17569 Apr 20 01:19 start_atlas.sh
[2025-04-20 02:18:33] -rw-r--r-- 2 boinc boinc    508883 Apr 20 01:19 input.tar.gz
[2025-04-20 02:18:33] -rw------- 1 boinc boinc 190035252 Apr 20 02:17 HITS.pool.root.1
[2025-04-20 02:18:33] -rw------- 1 boinc boinc    737280 Apr 20 02:18 result.tar.gz
02:18:35 (2848782): run_atlas exited; CPU time 31702.209892
02:18:35 (2848782): called boinc_finish(0)

</stderr_txt>
]]>

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